Detection of coffee fruits on tree branches using computer vision

Coffee farmers do not have efficient tools to have sufficient and reliable information on the maturation stage of coffee fruits before harvest. In this study, we propose a computer vision system to detect and classify the Coffea arabica (L.) on tree branches in three classes: unripe (green), ripe (cherry), and overripe (dry). Based on deep learning algorithms, the computer vision model YOLO (You Only Look Once), was trained on 387 images taken from coffee branches using a smartphone. The YOLOv3 and YOLOv4, and their smaller versions (tiny), were assessed for fruit detection. The YOLOv4 and YOLOv4-tiny showed better performance when compared to YOLOv3, especially when smaller network sizes are considered. The mean average precision (mAP) for a network size of 800 × 800 pixels was equal to 81 %, 79 %, 78 %, and 77 % for YOLOv4, YOLOv4-tiny, YOLOv3, and YOLOv3-tiny, respectively. Despite the similar performance, the YOLOv4 feature extractor was more robust when images had greater object densities and for the detection of unripe fruits, which are generally more difficult to detect due to the color similarity to leaves in the background, partial occlusion by leaves and fruits, and lighting effects. This study shows the potential of computer vision systems based on deep learning to guide the decision-making of coffee farmers in more objective ways.

Occupational noise level emitted by self-propelled harvesters during mechanized coffee harvesting / Nível de ruído ocupacional emitido por colhedoras automotrizes na colheita do cafeeiro

ABSTRACT: This study evaluated the level of occupational noise emitted by automotive harvesters during coffee harvest. For the evaluations, three self-propelled harvesters were used: Case-IH® model Coffee Express 200, with cabin; Korvan® model 9200, without cabin; and Oxbo® model 9220, with cabin. Data were collected using a noise dosimeter model DOS-700. Noise levels were assessed for the operator and assistant of each harvester. Five repetitions were performed for the operator and assistant, with each repetition consisting of 2 h of evaluation. Results obtained were compared with the action level and exposure limit of the Regulatory Norms (NR) 15 and Occupational Hygiene Norms (NHO) 01. The action levels of the NHO 01 (82 dB) and NR 15 (80 dB) regulations were exceeded for the operator and assistant in the three evaluated harvesters. Regarding the exposure limit (85 dB), the level was exceeded for the operator of the Korvan® and Case-IH® harvesters in accordance with NHO 01. In the NR 15 regulation, the exposure limit was > 85 dB for the operator of the Korvan® harvester. For the assistant, all harvesters emitted noise levels > 85 dB based on both the NHO 01 and NR 15 regulations.

RESUMO: O uso da mecanização na cafeicultura tem se mostrado de suma importância na colheita do cafeeiro, reduzindo custo e tempo desta operação. Entretanto, a intensificação da colheita mecanizada, sem o controle dos riscos ocupacionais tem exposto trabalhadores aos níveis elevados de ruído ocupacional capazes de comprometer sua saúde auditiva. O objetivo do trabalho foi avaliar o nível de ruído ocupacional emitido por colhedoras automotrizes na colheita do cafeeiro, bem como os limites de exposição e nível de ação do operador e auxiliar. Para as avaliações foram utilizadas três colhedoras automotrizes: Case-IH® modelo COFFE EXPESS 200, com cabine; OXBO® modelo 9220, com cabine; KORVAN® modelo 9200, sem cabine. A coleta dos dados foi realizada utilizando dosímetro de ruído modelo DOS-700. Foi avaliado o nível de exposição ao ruído do operador e auxiliar das colhedoras. Foram realizadas cinco repetições, sendo cada repetição formada por duas horas de avaliações. Os dados obtidos foram comparados com o nível de ação e limite de exposição das normativas NHO 01 e NR 15. O nível de ação das normativas NHO 01 (82 dB) e NR 15 (80 dB) foram ultrapassados no operador e auxiliar nas três colhedoras avaliadas. Em relação ao limite de exposição (85 dB), o nível foi ultrapassado no operador das colhedoras KORVAN® e Case-IH® de acordo com a NHO 01. Na normativa NR 15, o limite de exposição ficou acima de 85 dB no operador da colhedora KORVAN®. No auxiliar todas as colhedoras emitiram níveis de ruídos acima de 85 dB tanto na normativa NHO 01 quanto na NR 15.

Coffee crops adaptation to climate change in agroforestry systems with rubber trees in southern Brazil

Adaptation to climate change is a strategy for crops to cope with the scenario of rising temperatures worldwide. In the case of Coffea arabica L., the use of agroforestry systems (AFS) with woody species is a promising practice to reduce excessive heat during the day. This study aimed to 1) evaluate air temperature changes that occur in an AFS of coffee and double alleys of rubber trees (Hevea brasiliensis Müell. Arg.) and 2) carry out an analysis of future warming scenarios by comparing the cultivation of Arabic coffee in full sun and in an AFS of double alleys of rubber trees. The microclimatic variables were measured between two rows of coffee trees at 1.0 m of height from June 2016 to June 2018. The results indicate that the AFS with double alleys of rubber trees spaced 16 m apart had an average temperature reduction from 1.4 to 2.5 °C from 10h00 to 16h00. The study also simulated temperature increases of 1.7, 2.6, 3.1, and 4.8 °C from 2018 to 2099, according to scenarios predicted by the Intergovernmental Panel on Climate Change (IPCC), and the impact in coffee production in Paraná State, Brazil. Using the climatic generator PGECLIMA_R, simulations suggest a progressive reduction of traditional areas suitable for open-grown coffee in the state. Production conditions can be maintained through the AFS, since the systems attenuate mean temperatures by 1-2 °C. We conclude that the AFS of coffee and rubber trees contribute to coffee crop adaptations to a future warmer environment.

Cobertura de polietileno e fontes de adubo podem reduzir bicho-mineiro e ácaro-vermelho em cafeeiro? / Can polyethylene cover and fertilizer sources reduce leaf miner and red mite in coffee?

A cafeicultura vem crescendo cada vez mais no Brasil e, diante disso, tecnologias são desenvolvidas constantemente para obtenção de maiores produtividades. Nesse contexto, vem sendo estudado o efeito do mulching de polietileno e fontes de adubo na cafeicultura. O objetivodesse trabalho foi avaliar a incidência de bicho-mineiro e ácaro-vermelho em cafeeiro em função do uso do mulchingde polietileno e adubos (liberação controlada e convencional). A pesquisa foi realizada na área experimental da Universidade Federalde Uberlândia ­CampusMonte Carmelo, Minas Gerais, com a cultivar de Coffea arabicaIPR 100, com delineamento em blocos casualizados e quatro repetições. Foram testados os seguintes tratamentos: T1 -mulchingdupla face branco/preto com adubo convencional; T2 ­mulchingdupla face branco/preto com adubo de liberação controlada; T3 ­mulchingdupla face prata/preto com adubo convencional; T4 ­mulchingdupla face prata/preto com adubo de liberação controlada; T5 ­Sem mulchingcom adubo convencional; T6 ­Sem mulchingcom adubo de liberação controlada. As avaliações ocorreram quinzenalmente de julho de 2020 a dezembro de 2020, mediante a constatação da presença ou ausência de ácaro-vermelho e de lagartas de bicho-mineiro. Os picos de densidade populacional para bicho-mineiro ocorreram no período de julho a outubro de 2020, e para ácaro-vermelho no mês de agosto, devido à baixa umidade relativa do ar e precipitação. Assim, conclui-se que a utilização do mulchingdupla face prata/preto proporcionou maior atratividade do bicho-mineiro-do-cafeeiro. Já as fontes de adubo não influenciaram na probabilidade de ocorrência deste inseto-praga. Além disso, os adubos convencionais, bem como os de liberação controlada, e a ausência/presença de coberturas do solo, não influenciaram na incidência deácaro-vermelho em cafeeiros da região do Cerrado Mineiro.(AU)

Coffee crop has been growing increasingly in Brazil and, in view of this, technologies are constantly being developedto obtain greater productivity. In this context, the effect of polyethylene mulchingas a source of fertilizer on coffee production has been studied. The objective of this work was to evaluate the incidence of leaf miner and red mite in coffee as a function of the use of polyethylene mulching and controlled and conventional release fertilizer. The research was carried out in the experimental area of the Federal University of Uberlândia -Campus Monte Carmelo, Minas Gerais, with the cultivar IPR 100, in arandomized block design with four blocks. The following treatments were tested: T1 -double-faced white/black mulchingwith conventional fertilizer; T2 ­white/black double-sided mulchingwith controlled release fertilizer; T3 ­double-sided silver/black mulchingwith conventional fertilizer; T4 ­silver/black double-sided mulchingwith controlled release fertilizer; T5 ­No mulchingwith conventional fertilizer; T6 ­No mulchingwith controlledreleasefertilizer. The evaluations took place fortnightly from July 2020 to December 2020, upon verification of the presence or absence of leaf miner and red mite caterpillars. Population density peaks for leaf miner occurred from July to October 2020, and for red mite in August, due to low relative humidity and precipitation. Thus, it is concluded that the use of double-sided silver/black mulching provided greater attractiveness to the coffee leaf miner. The fertilizer sources did not influence the probability of occurrence of this insect pest. In addition, conventional fertilizers, as well as those of controlled release, and the absence/presence of soil coverings, did not influence the incidence of red mite in coffee trees in the Cerrado Mineiro region.(AU)

Initial performance and genetic diversity of coffee trees cultivated under contrasting altitude conditions

This work evaluated the initial performance and genetic diversity of Coffea canephora genotypes cultivated in environments at contrasting altitudes. Fourteen morphophysiological traits and seven descriptors of the genus Coffea spp. of coffee trees cultivated at altitudes of 140 m and 700 m were evaluated. The design used was Federer's augmented block in a 2 × 112 factorial scheme with six blocks. The first factor was the two environments, and the second was the 112 genotypes, with eight common treatments, being five conilon coffee clones and three arabica coffee cultivars. The data were analyzed by the method of REML/BLUP and genetic correlation method. Genetic diversity was evaluated by estimating the distance matrix, applying the Gower methodology followed by the clustering method by Tocher and UPGMA. The phenotypic means were higher in the environment at an altitude of 700 m, except for plant height, number of leaves, and canopy height (CH). Genotypic effects were significant for most traits except for leaf width, CH, unit leaf area, and total leaf area. A wide genetic diversity was verified, with distances varying from 0.037 to 0.593 for the pairs of genotypes 26 × 93 and T7 × 76, respectively. Most of the traits studied showed high genotypic correlation with the environment and expressive genetic correlation between the evaluated traits thereby demonstrating the possibility of indirect selection. There is an adaptation of conilon coffee genotypes to high altitudes and the possibility of developing a specific cultivar for the southern state of Espírito Santo.

Commercial characteristics of coffee seedlings produced with different sources of phosphorus and plant growth-promoting bacteria / Características comerciais de mudas de café produzidas com diferentes fontes de fósforo e bactérias promotoras de crescimento de plantas

Considered the economic engine of many countries, the coffee culture represents an important component of the agricultural chain in Brazil. The growing values of commercialization, planting areas, and crop productivity require the acquisition of quality seedlings, which must receive adequate nutritional support through efficient fertilizers. Slow and controlled-release fertilizers, such as organominerals, gain prominence when it comes to increasing efficiency in the use of phosphorus, as well as plant growth-promoting bacteria (PGPB) with phosphate solubilizing characteristics. This study aimed to evaluate the effect of different sources of mineral and organomineral fertilizers, inoculated and non-inoculated with PGPB on the quality parameters of coffee seedlings. In general, the P sources used in the experiment positively interfered with the development of coffee seedlings. This proves that there is a need for nutritional supplementation for the good development of the seedlings. Among the sources used, the organomineral in granulated form showed better performance in coffee seedlings' growth and physiological parameters, proving to be a viable alternative to commonly used fertilizers. The addition of PGPB showed a significant advantage for seedling quality variables.

Considerado o motor econômico de muitos países, a cultura do café representa um importante componente da cadeia agrícola no Brasil. Os crescentes valores de comercialização, das áreas de plantio e da produtividade da cultura requerem aquisição de mudas de qualidade, que devem receber adequado aporte nutricional através do uso eficiente de fertilizantes. Fertilizantes de liberação lenta e controlada, a exemplo dos organominerais, ganham destaque quando se trata de aumento da eficiência no uso do fósforo, assim como as bactérias promotoras de crescimento de plantas (BPCP) com características solubilizadoras de fosfato. Esse estudo teve como objetivo avaliar o efeito de diferentes fontes de fertilizantes mineral e organomineral, inoculados e não inoculados com BPCP, sobre parâmetros de qualidade de mudas de café. De forma geral, as fontes de P utilizadas no experimento interferiram positivamente no desenvolvimento das mudas de café. Isso comprova que existe a necessidade de complementação nutricional para um bom desenvolvimento das mudas. Dentre as fontes utilizadas, o organomineral na forma granulada apresentou melhor desempenho nos parâmetros de crescimento e fisiológicos das mudas de café, mostrando ser uma alternativa viável aos fertilizantes comumente utilizados. A adição de BPCP apresentou vantagem significativa para as variáveis de qualidade das mudas.

Occupational noise level emitted by self-propelled harvesters during mechanized coffee harvesting / Nível de ruído ocupacional emitido por colhedoras automotrizes na colheita do cafeeiro

This study evaluated the level of occupational noise emitted by automotive harvesters during coffee harvest. For the evaluations, three self-propelled harvesters were used: Case-IH® model Coffee Express 200, with cabin; Korvan® model 9200, without cabin; and Oxbo® model 9220, with cabin. Data were collected using a noise dosimeter model DOS-700. Noise levels were assessed for the operator and assistant of each harvester. Five repetitions were performed for the operator and assistant, with each repetition consisting of 2 h of evaluation. Results obtained were compared with the action level and exposure limit of the Regulatory Norms (NR) 15 and Occupational Hygiene Norms (NHO) 01. The action levels of the NHO 01 (82 dB) and NR 15 (80 dB) regulations were exceeded for the operator and assistant in the three evaluated harvesters. Regarding the exposure limit (85 dB), the level was exceeded for the operator of the Korvan® and Case-IH® harvesters in accordance with NHO 01. In the NR 15 regulation, the exposure limit was > 85 dB for the operator of the Korvan® harvester. For the assistant, all harvesters emitted noise levels > 85 dB based on both the NHO 01 and NR 15 regulations.

O uso da mecanização na cafeicultura tem se mostrado de suma importância na colheita do cafeeiro, reduzindo custo e tempo desta operação. Entretanto, a intensificação da colheita mecanizada, sem o controle dos riscos ocupacionais tem exposto trabalhadores aos níveis elevados de ruído ocupacional capazes de comprometer sua saúde auditiva. O objetivo do trabalho foi avaliar o nível de ruído ocupacional emitido por colhedoras automotrizes na colheita do cafeeiro, bem como os limites de exposição e nível de ação do operador e auxiliar. Para as avaliações foram utilizadas três colhedoras automotrizes: Case-IH® modelo COFFE EXPESS 200, com cabine; OXBO® modelo 9220, com cabine; KORVAN® modelo 9200, sem cabine. A coleta dos dados foi realizada utilizando dosímetro de ruído modelo DOS-700. Foi avaliado o nível de exposição ao ruído do operador e auxiliar das colhedoras. Foram realizadas cinco repetições, sendo cada repetição formada por duas horas de avaliações. Os dados obtidos foram comparados com o nível de ação e limite de exposição das normativas NHO 01 e NR 15. O nível de ação das normativas NHO 01 (82 dB) e NR 15 (80 dB) foram ultrapassados no operador e auxiliar nas três colhedoras avaliadas. Em relação ao limite de exposição (85 dB), o nível foi ultrapassado no operador das colhedoras KORVAN® e Case-IH® de acordo com a NHO 01. Na normativa NR 15, o limite de exposição ficou acima de 85 dB no operador da colhedora KORVAN®. No auxiliar todas as colhedoras emitiram níveis de ruídos acima de 85 dB tanto na normativa NHO 01 quanto na NR 15.

Phosphorus sources in the growth and quality of arabica coffee seedlings produced in tubes / Fontes de fósforo no crescimento e qualidade de mudas de café arábica produzidas em tubetes

The objective of this study was to evaluate the growth and quality of arabica coffee seedlings produced in tubes under different sources of phosphorus (P). The experiment was conducted in a greenhouse in a randomized block design with ten treatments (control, Osmocote®, three doses of pelleted organomineral, three doses of mashed organomineral, MAP, coated MAP) and four replications, three plants per plot. The dose of organomineral, MAP, and MAP coated was based on the recommendation of P2O5for the formation of coffee seedlings.For Osmocote®, the manufacturer's recommendation was used depending on the amount, in dm³, of substrate. After 180 days of transplanting, the growth characteristics of the plants (leaf dry matter, stem, and roots) were evaluated, and the aerial part and root system ratio and Dickson's quality index were calculated, as well as regression equations were adjusted for the evaluated parameters. For the growth and quality of seedlings, it was observed that in fertilizations with pelleted and branched organomineral, coated MAP and Osmocote®, the highest averages were obtained for the contents of dry matter, height, diameter of the collection and quality indexes, when compared to the other sources of P2O5.The dose that provides the maximum growth and quality of coffee seedlings for the treatments with organomineral was calculated, this being equal to 6 g/dm³ of P2O5for bran and pelleted organomineral. According to the results, the sources that promoted the formation of a vigorous seedling, with an adequate supply of nutrients and a good quality standard are pelleted organonineral fertilization and MAP, reducing the risk of losses and consequently the need to discard the seedlings in the nursery.(AU)

O objetivo deste estudo foi avaliar o crescimento e a qualidade de mudas de café arábica produzidas em tubetes sob diferentes fontes de fósforo(P). O experimento foi conduzido em casa de vegetação em delineamento de blocos casualizados com dez tratamentos(controle, Osmocote®, três doses de organomineral peletizado, três doses de organomineral farelado, MAP, MAP revestido)e quatrorepetições, três plantas por parcela. A dose de organomineral, MAP e MAP revestidofoi baseada na recomendação de P2O5para a formação de mudas de café. Para Osmocote®, foi utilizada a recomendação do fabricante emfunção da quantidade, em dm³, de substrato. Após 180 dias do transplante, foram avaliadas as características de crescimento das plantas (matéria seca de folhas, caule e raízes), calculadas a razão parte aérea e sistema radicular e o índice de qualidade de Dickson, bem como ajustadas equações de regressão para os parâmetros avaliados. Para o crescimento e qualidade das mudas, observou-se que nas adubações com organomineral peletizado e farelado, MAP revestido e Osmocote®, as maiores médias para os teores de matéria seca, altura, diâmetro da coletae índices de qualidade, quando comparados as outras fontes de P2O5.Foi possível identificara dose que proporciona o máximo crescimento e qualidade de mudas de café para os tratamentos com organomineral, sendo esta igual a 6 g/dm³ de P2O5para o organomineral farelado e peletizado. De acordo com os resultados, as fontes que promoveram a formação de uma muda vigorosa, com aporte adequado de nutrientes e um bom padrão de qualidade são a adubação organomineral peletizada e MAP, reduzindo o risco de perdas e consequentemente a necessidade de descarte das mudas no viveiro.(AU)

Morpho-agronomic and leaf anatomical traits in Coffeacanephora genotypes / Caracteres morfoagronômicos e anatômicos foliares em genótipos de Coffea canephora

ABSTRACT: Genetic variability is the basis for coffee genetic breeding. This study evaluated the potential of leaf anatomy and morpho-agronomic traits in studies of genetic variability in C. canephoracultivars. Ten genotypes were distributed in randomized block designs with three replicates. Significant differences among genotypes were detected by F-test (P < 0.05) for 13 of 15 evaluated traits. These results evidenced the heterogeneity of the studied cultivars, which is essential in composition of genetic basis in breeding programs. The Scott-Knott test detected variability among genotypes, grouped into up to four mean groups. Leaf anatomy traits presented the largest variations. Five out of seven leaf anatomy traits presented heritability higher than 80%, with emphasis on stomatal density (95.69%) and stomatal pore length (92.72%). Positive correlations were observed among morpho-agronomic and anatomic traits. Cluster analysis used the Mahalanobis general distance (D2) as a measure of genetic dissimilarity and divided the genotypes into two distinct groups. The inclusion of leaf anatomic traits to characterize C. canephoragenotypes may assist plant breeders with better genetic discrimination and with greater security in plant selection when composing cultivars.

RESUMO: A variabilidade genética é a base para o progresso genético em café. Este estudo teve como objetivo, avaliar o potencial de caracteres morfoagronômicos e anatômicos foliares em estudos de variabilidade genética entre cultivares de Coffea canephora. Dez genótipos foram distribuídos em um experimento seguindo delineamento em blocos ao acaso com três repetições. Foram detectadas diferenças significativas entre os genótipos pelo teste F (P < 0,05) para 13 dos 15 caracteres avaliados. Esses resultados evidenciaram a heterogeneidade entre as cultivares estudadas, o que é essencial para a composição da base genética e avanço dos programas de melhoramento. O teste de Scott e Knott detectou as diferenças entre os genótipos, separando-os em quatro grupos. Os caracteres anatômicos foliares apresentaram as maiores variações. Cinco, dentre os sete caracteres anatômicos foliares, apresentaram estimativas de herdabilidade superiores a 80% com destaque para a densidade estomática (95,69%) e comprimento do poro estomático (92,72%). Correlações positivas foram observadas entre caracteres morfoagronômicos e anatômicos foliares. A análise de agrupamento, considerando a distância de Mahalanobis como medida de dissimilaridade (D²), apontou a distinção de dois grupos de genótipos. A inclusão de caracteres anatômicos foliares na caracterização de genótipos de C. canephora pode auxiliar os melhoristas de plantas na melhor discriminação entre genótipos e maior segurança na seleção de clones para geração de novas cultivares.

Living in the city and producing in the countryside: the growth of a new type of farmer and agriculture in Brazil / Viver na cidade e produzir no campo: o crescimento de um novo tipo de agricultor e de agricultura no Brasil

ABSTRACT: Living in rural neighborhoods has always been a characteristic of small and medium-sized Brazilian farmers. However, when observing the agricultural censuses of 2006 and 2017, carried out in Brazil, there is a tendency to separate the place of work and residence of farmers. This articleanalyzed the double residence and the phenomenon of pendular displacement of farmers in the municipalities of Zona da Mata Mineira (ZMM), an important coffee region in Minas in Brazil, and to discuss its possible causes and impacts in the region. The research used data from the 2006 and 2017 Agricultural Censuses of the Brazilian Institute of Geography and Statistics. The data were analyzed using descriptive statistics and multivariate linear regression models in order to better understand the factors that correlate with the percentage of owners living in cities in the municipalities of region. The results showed that, in the case of the ZMM, the growth of urban residence of farmers more expressive than the other regions of the country is mainly due to the predominance of small coffee producers. Furthermore, living in the city does not mean abandoning agricultural establishments, since living in the city does not prevent daily work in the countryside. It was concluded that the urban residence of the farmers constituted a reproductive strategy that made it possible for them to carry out other activities as well as the receipt of retirement and pensions that complement the agricultural income and, consequently, the maintenance of the agricultural establishment.

RESUMO: Morar em bairros rurais sempre foi uma característica dos pequenos e médios agricultores brasileiros. No entanto, ao se observar os censos agrícolas de 2006 e 2017, realizados no Brasil, nota-se uma tendência de separar o local de trabalho e residência dos agricultores. O objetivo deste artigo é analisar a dupla residência e o fenômeno do deslocamento pendular de agricultores nos municípios da Zona da Mata Mineira (ZMM), importante região cafeeira de Minas no Brasil, e discutir suas possíveis causas e impactos na região. A pesquisa utilizou dados dos Censos Agropecuários de 2006 e 2017 do Instituto Brasileiro de Geografia e Estatística. Os dados foram analisados por meio de estatísticas descritivas e modelos de regressão linear multivariada a fim de compreender melhor os fatores que se correlacionam com o percentual de proprietários residentes em cidades dos municípios da região. Os resultados mostraram que, no caso da ZMM, o crescimento da residência urbana dos agricultores mais expressivo do que as demais regiões do país deve-se, principalmente, ao predomínio de pequenos produtores de café. Além disso, morar na cidade não significa abandonar os estabelecimentos agrícolas uma vez que a moradia na cidade não impede o trabalho diário no campo. Concluiu-se que a residência urbana dos agricultores constituiu uma estratégia reprodutiva que possibilitou que estes realizassem outras atividades (principalmente não-agrícola) assim como o recebimento de aposentadorias e pensões que complementam a renda agrícola e, consequentemente, a manutenção do estabelecimento agrícola.

Inhibition of mycelial growth, conidial germination, and Botrytis cinerea Pers: Fr colonization in begonia with biocompatible products

This study evaluated the effects of potassium and sodium carbonate and bicarbonate, Bacillus subtilis (Cohn, 1872) QST-713, Bacillus pumilus (Meyer & Gottheil, 1901) QST-2808, and crude and roasted coffee oils on the inhibition of mycelial growth and conidial germination in Botrytis cinerea Pers.: Fr and the colonization of begonia (Begonia elatior Hort. ex Steud) leaf discs by B. cinerea inoculated before, simultaneously and after with these alternative products. The assays were carried out using the Baladin begonia cultivar. The inhibition of B. cinerea mycelial growth and conidial germination was proportional to increases in the concentration of all the products. The inhibition of conidial germination was directly proportional to the concentrations of B. pumilus QST-2808 and B. subtilis QST-713. Coffee oils were less efficient in inhibiting germination than the other products. The crude and roasted coffee oils, potassium and sodium carbonates and bicarbonates, and B. pumilus and B. subtilis sprayed 24 h before, simultaneously, or 24 h after pathogen inoculation inhibited the colonization of begonia leaf discs by B. cinerea. The positive results for the suppression of B. cinerea by the alternative products tested herein merit scrutiny. There is a pressing need to evaluate these products in the management of gray mold, as the severity of this disease is usually high under favorable conditions in greenhouses.

Transcriptome analysis of the spider Phonotimpus pennimani reveals novel toxin transcripts

Background: Phonotimpus pennimani (Araneae, Phrurolithidae) is a small-sized (3-5 mm) spider endemic to the Tacaná volcano in Chiapas, Mexico, where it is found in soil litter of cloud forests and coffee plantations. Its venom composition has so far not been investigated, partly because it is not a species of medical significance. However, it does have an important impact on the arthropod populations of its natural habitat. Methods: Specimens were collected in Southeastern Mexico (Chiapas) and identified taxonomically by morphological characteristics. A partial sequence from the mitochondrial gene coxI was amplified. Sequencing on the Illumina platform of a transcriptome library constructed from 12 adult specimens revealed 25 toxin or toxinlike genes. Transcripts were validated (RT-qPCR) by assessing the differential expression of the toxin-like PpenTox1 transcript and normalising with housekeeping genes. Results: Analysis of the coxI-gene revealed a similarity to other species of the family Phrurolithidae. Transcriptome analysis also revealed similarity with venom components of species from the families Ctenidae, Lycosidae, and Sicariidae. Expression of the toxinlike PpenTox1 gene was different for each developmental stage (juvenile or adult) and also for both sexes (female or male). Additionally, a partial sequence was obtained for the toxin-like PpenTox1 from DNA. Conclusion: Data from the amplification of the mitochondrial coxI gene confirmed that P. pennimani belongs to the family Phrurolithidae. New genes and transcripts coding for venom components were identified.(AU)

Stable fly outbreaks in Brazil: a 50-year (1971-2020) retrospective / Surtos da mosca-dos-estábulos no Brasil: Retrospectiva 50 anos (1971-2020)

Over the last decades, stable fly (Stomoxys calcitrans) outbreaks associated with agricultural and/or livestock production systems have become a serious problem in some Brazilian locations. This article presents a survey on the history, evolution and mapping of such outbreaks in Brazil over five decades (1971-2020). Outbreaks (n= 579) were recorded in 285 municipalities from 14 states, mainly associated with by-products from the ethanol industry (82.7%), in natura organic fertilizers (12.6%) and integrated crop-livestock systems (3.1%). Few cases were reported until the mid-2000s, progressively increasing since then. Outbreaks associated with ethanol mills occurred in 224 municipalities, mainly in Southeast and Midwest states, while those associated with organic fertilizers (mainly poultry litter and coffee mulch) affected 39 municipalities, mostly in the Northeast and Southeast states. More recently, outbreaks in integrated crop-livestock systems during the rainy season have occurred in Midwest states. This survey highlights the magnitude of the problem of stable fly outbreaks in Brazil and its relationship with environmental public policies, agricultural production chains and regional trends. Specific public actions and policies are urgently needed to prevent their occurrence and impact in the affected regions.(AU)

Nas últimas décadas, surtos da mosca-dos-estábulos (Stomoxys calcitrans), associados a sistemas de produção agrícola e/ou pecuária, tornaram-se um grave problema em algumas localidades brasileiras. Este artigo apresenta um levantamento sobre a história, evolução e mapeamento desses surtos no Brasil ao longo de cinco décadas (1971-2020). Surtos (n= 579) foram registrados em 285 municípios de 14 estados, principalmente associados a subprodutos da indústria do etanol (82,7%), fertilizantes orgânicos in natura (12,6%) e sistemas de integração lavoura-pecuária (3,1%). Poucos casos foram registrados até meados dos anos 2000, aumentando progressivamente desde então. Surtos associados a usinas de etanol ocorreram em 224 municípios, principalmente no Sudeste e Centro-Oeste, enquanto surtos associados a fertilizantes orgânicos (principalmente esterco aviário e palha de café) afetaram 39 municípios, principalmente nos estados do Nordeste e Sudeste. Mais recentemente, surtos em sistemas de integração lavoura-pecuária, durante a estação chuvosa, têm ocorrido no Centro-Oeste. Este levantamento ressalta a magnitude do problema dos surtos da mosca-dos-estábulos no Brasil e sua relação com políticas públicas ambientais, cadeias produtivas agrícolas e tendências regionais. Ações e políticas públicas específicas são urgentemente necessárias para prevenir sua ocorrência e impacto nas regiões afetadas.(AU)

First record of Psocodea (Psocoptera) on coffee (Coffea canephora) in the Brazilian Amazon (Rondônia state) / Primeiro registro de Psocodea ('Psocoptera') em café (Coffea canephora) em Rôndonia, na Amazônia brasileira

There is much information regarding the association of Psocoptera and coffee as stored grain pests and little is known about their presence in coffee plants. We conducted a survey in a coffee plantation of Coffea canephora in the municipality of Candeias do Jamari, Rondônia state, Brazil, where we obtained the first record of a coffee plant as a host of Psocoptera in the Brazilian Amazon region, and the first record of a representative of the family Archipsocidae (Archipsocus lenkoi) for the state of Rondônia. The psocid population was concentrated and not evenly distributed over the survey area, which indicates an irregular distribution pattern. We have not detected damage or injury to the coffee plants and therefore we cannot consider these psocids as a pest in the coffee plantation.(AU)

Há muita informação sobre a associação de Psocoptera e café como peste em grãos armazenados, mas pouco se sabe sobre sua presença nas plantas do café. Nós realizamos uma amostragem em uma plantação de café de Coffea canephora no município de Candeias do Jamari, Rondônia, onde obtivemos o primeiro registro de uma planta de café como hospedeira de Psocoptera na Amazônia brasileira e o primeiro registro de um representante da família Archipsocidae (Archipsocus lenkoi) para o estado de Rondônia. A população de psocídeos estava concentrada e não distribuída uniformemente na área de amostragem, o que indica um padrão de distribuição irregular. Não detectamos danos ou injúrias nas plantas de café e, portanto, não podemos considerar esses psocídeos como uma praga na plantação de café.(AU)

Modified hydroponics and phenolic foam as technological innovations in the production of coffee seedlings from cuttings / Hidroponia modificada e espuma fenólica como inovações tecnológicas na produção de mudas de cafeeiro oriundas de estacas

Brazilian coffee production represents an important activity in the country's agricultural sector and, for this reason, it requires innovative technologies for the production of seedlings, which is one of the most important inputs in crop implantation. Thus, plant cloning by cutting, mineral nutrition via modified hydroponics and the use of alternative substrates appear as technological innovations for seedling production. This study evaluated the production of clonal coffee seedlings in a modified hydroponic system in comparison to the conventional climate-controlled greenhouse system, using vermiculite and phenolic foam as alternative substrates. At the end of the experiment, the seedlings were analyzed for growth (height, stem diameter, number of total leaves, leaf area, root area, shoot and root dry matter) and physiological (chlorophyll content and stomatal conductance) characteristics. For the statistical analysis, a completely randomized design was used in a factorial scheme 2 (types of substrate) x 2 (cultivation systems) with six replications and ten plants per plot. The innovative modified hydroponic system leads to a greater growth of coffee seedlings produced by cuttings in tubes with vermiculite compared to those produced in conventional systems. The substrate phenolic foam can be used alternatively in the air-conditioned greenhouse system. However, in the modified hydroponic system, it is not indicated, as it causes total seedling mortality.(AU)

A cafeicultura brasileira representa uma importante atividade no setor agrícola do país e por isto necessita de tecnologias inovadoras para a produção de mudas, que é um dos insumos de maior importância na implantação das lavouras. Sendo assim a clonagem de plantas por estaquia, a nutrição mineral via hidroponia modificada e o uso de substratos alternativos surgem como inovações tecnológicas para a produção de mudas. Objetivou-se com o presente trabalho avaliar a produção de mudas clonais de cafeeiro em sistema hidropônico modificado em comparação ao sistema convencional de casa de vegetação climatizada, utilizando a vermiculita e espuma fenólica como substratos alternativos. Ao final do experimento as mudas foram analisadas quanto as características de crescimento (altura, diâmetro de caule, número total de folhas, área foliar, área radicular, matéria seca da parte aérea e raiz) e fisiológicas (teores de clorofila e condutância estomática). Para a análise estatística foi utilizado o delineamento inteiramente casualizado no esquema fatorial 2 (tipos de substrato) x 2 (sistemas de cultivo) com seis repetições e dez plantas por parcela. Concluiu-se, portanto que o sistema inovador de hidroponia modificada promove maior crescimento das mudas de cafeeiro produzidas por estaquia em tubetes com vermiculita em relação àquelas produzidas em sistema convencional. O substrato espuma fenólica pode ser utilizado alternativamente no sistema de casa de vegetação climatizada, porém no sistema de hidroponia modificada não é indicado pois promove mortalidade total das mudas.(AU)

Bayesian modeling of the coffee tree growth curve / Modelagem bayesiana da curva de crescimento do cafeeiro

When modeling growth curves, it should be considered that longitudinal data may show residual autocorrelation, and, if this characteristic is not considered, the results and inferences may be compromised. The Bayesian approach, which considers priori information about studied phenomenon has been shown to be efficient in estimating parameters. However, as it is generally not possible to obtain marginal distributions analytically, it is necessary to use some method, such as the weighted resampling method, to generate samples of these distributions and thus obtain an approximation. Among the advantages of this method, stand out the generation of independent samples and the fact that it is not necessary to evaluate convergence. In this context, the objective of this work research was: to present the Bayesian nonlinear modeling of the coffee tree height growth, irrigated and non-irrigated (NI), considering the residual autocorrelation and the nonlinear Logistic, Brody, von Bertalanffy and Richard models. Among the results, it was found that, for NI plants, the Deviance Information Criterion (DIC) and the Criterion of density Predictive Ordered (CPO), indicated that, among the evaluated models, the Logistic model is the one that best describes the height growth of the coffee tree over time. For irrigated plants, these same criteria indicated the Brody model. Thus, the growth of the non-irrigated and irrigated coffee tree followed different growth patterns, the height of the non-irrigated coffee tree showed sigmoidal growth with maximum growth rate at 726 days after planting and the irrigated coffee tree starts its development with high growth rates that gradually decrease over time.

Na modelagem de curvas de crescimento deve-se considerar que dados longitudinais podem apresentar autocorrelação residual, sendo que, se tal característica não é considerada, os resultados e inferências podem ser comprometidos. A abordagem bayesiana, que considera informações à priori sobre o fenômeno em estudo tem se mostrado eficiente na estimação de parâmetros. No entanto, como geralmente não é possível obter as distribuições marginais de forma analítica, faz-se necessário a utilização de algum método, como o método de reamostragem ponderada, para gerar amostras dessas distribuições e assim obter uma aproximação para as mesmas. Dentre as vantagens desse método, destaca-se a geração de amostras independentes e o fato de não ser necessário avaliar convergência. Diante desse contexto, o objetivo deste trabalho foi apresentar a modelagem não linear bayesiana do crescimento em altura de plantas do cafeeiro, irrigadas e não irrigadas (NI), considerando a autocorrelação residual e os modelos não lineares Logístico, Brody, von Bertalanffy e Richards. Em vista dos resultados, verificou-se que, para as plantas NI, o DIC e CPOc, indicaram que, dentre os modelos avaliados, o modelo Logístico é o que melhor descreve o crescimento em altura do cafeeiro ao longo do tempo. E, para as plantas irrigadas, esses mesmos critérios indicaram o modelo Brody. Assim, o crescimento da planta do cafeeiro não irrigado e irrigado seguiram padrões de crescimento distintos, a altura do cafeeiro não irrigado apresentou crescimento sigmoidal com taxa máxima de crescimento aos 726 dias após o plantio, já o cafeeiro irrigado inicia seu desenvolvimento com altas taxas de crescimento que vão diminuindo aos poucos com o tempo.

Metagenomic study of the communities of bacterial endophytes in the desert plant Senna Italica and their role in abiotic stress resistance in the plant / Estudo metagenômico das comunidades de endófitos bacterianos na planta do deserto Senna Italica e seu papel na resistência ao estresse abiótico na planta

Plant leaves and roots are home to diverse communities of bacteria, which play a significant role in plant health and growth. Although one of the most unfriendly environments for plant growth is deserts, desert plants can influence their surrounding microbial population and choose favorable bacteria that encourage their growth under these severe circumstances. Senna italica is known for its excellent medicinal values as a traditional medical plant, but little is known about its associated endophytic bacterial community under extreme conditions. In the present study, metagenomic sequencing of 16S rRNA was used to report the diversity of endophytic bacterial communities associated with the leaves and roots of the desert medicinal plant Senna italica that was collected from the Asfan region in northeast Jeddah, Saudi Arabia. Analyses of the 16S rRNA sequences at the taxonomic phylum level revealed that bacterial communities in the roots and leaves samples belonged to five phyla, including Cyanobacteria, Proteobacteria, Actinobacteria, Firmicutes, and unclassified phyla. Results indicated that the most common phyla were Cyanobacteria/Chloroplast and Actinobacteria. Analysis of the 16S rRNA sequences at the taxonomic phylum level revealed that bacterial communities in the roots and leaves samples belonged to twelve genera at the taxonomic genus level. The most abundant ones were highlighted for further analysis, including Okibacterium and Streptomyces found in Actinobacteria, which were the dominant genus in roots samples. However, Streptophyta found in Cyanobacteria/Chloroplast was the dominant genus in leaf samples. Metagenomic analysis of medicinal plants leads to identifying novel organisms or genes that may have a role in abiotic stress resistance in the plant. The study of endophytic microbiome taxonomic, phylogenetic, and functional diversity will better know innovative candidates that may be selected as biological agents to enhance agricultural and industrial processes, especially for crop desert agricultural improvement.

As folhas e raízes das plantas abrigam diversas comunidades de bactérias, que desempenham um papel significativo na saúde e no crescimento das plantas. Embora um dos ambientes mais hostis para o crescimento de plantas sejam os desertos, as plantas do deserto podem influenciar a população microbiana circundante e escolher bactérias favoráveis ​​que encorajem seu crescimento sob essas circunstâncias severas. Senna italica é conhecida por seus excelentes valores medicinais como planta medicinal tradicional, mas pouco se sabe sobre sua comunidade bacteriana endofítica associada em condições extremas. No presente estudo, o sequenciamento metagenômico de 16S rRNA foi usado para relatar a diversidade de comunidades bacterianas endofíticas associadas às folhas e raízes da planta medicinal do deserto Senna italica que foi coletada na região de Asfan no nordeste de Jeddah, Arábia Saudita. Análises das sequências de rRNA 16S no nível taxonômico do filo revelaram que as comunidades bacterianas nas amostras de raízes e folhas pertenciam a cinco filos, incluindo Cyanobacteria, Proteobacteria, Actinobacteria, Firmicutes e filos não classificados. Os resultados indicaram que os filos mais comuns foram Cyanobacteria/Cloroplast e Actinobacteria. A análise das sequências de rRNA 16S no nível taxonômico do filo revelou que as comunidades bacterianas nas amostras de raízes e folhas pertenciam a doze gêneros no nível taxonômico de gênero. Os mais abundantes foram destacados para análise posterior, incluindo Okibacterium e Streptomyces encontrados em Actinobacteria, que foram os gêneros dominantes nas amostras de raízes. No entanto, Streptophyta encontrado em Cyanobacteria/Chloroplast foi o gênero dominante nas amostras de folhas. A análise metagenômica de plantas medicinais leva à identificação de novos organismos ou genes que podem ter um papel na resistência ao estresse abiótico na planta. O estudo da diversidade taxonômica, filogenética e funcional do microbioma endofítico conhecerá melhor os candidatos inovadores que podem ser selecionados como agentes biológicos para melhorar os processos agrícolas e industriais, especialmente para o melhoramento agrícola do deserto.

Different nitrogen levels on vegetative growth and yield of conilon coffee (Coffea canephora) / Efeitos de diferentes níveis de nitrogênio sobre o crescimento vegetativo e produtividade do café conilon (Coffea canephora)

The determination of nitrogen in plants by techniques that allow a fast diagnosis, based on plant growth characteristics, can be a useful tool for the nutritional management of coffee plants. Thus, this study evaluated growth and yield characteristics of irrigated conilon coffee in response to different nitrogen levels, resulting in the determination of the minimum N levels required to achieve the maximum yield, here called critical levels. The experiment was carried out in Colatina, Espirito Santo, Brazil, on plantations of conilon coffee, clonal variety Emcapa 8111, genotype 02. Six nitrogen levels were applied (0, 110, 220, 440, 880 and 1320 kg N ha-1) and the response in growth and yield characteristics periodically evaluated. There was a positive effect of the increasing N levels on yield, in that the N levels that provided 95% of the maximum yield (137.4 bags ha-1 and 108.5 bags ha-1) in the 2012/2013 and 2013/2014 growing seasons, respectively, were 420.7 and 543.1 kg N ha-1. There was also a positive effect of N levels on the growth characteristics and nitrogen contents, indicating their use as tools for a rapid nutritional diagnosis, with a view to optimizing the nitrogen management in Conilon coffee.

A determinação do nitrogênio nas plantas por técnicas que permitem um diagnóstico rápido, baseado nas características de crescimento das plantas, pode ser uma ferramenta útil para o manejo nutricional das plantas de café. Assim, o objetivo deste estudo foi avaliar as características de crescimento e rendimento do café conilon irrigado em resposta à diferentes níveis de nitrogênio, resultando na determinação dos níveis mínimos de N necessárias para atingir o rendimento máximo, aqui chamadas de níveis críticos. O experimento foi realizado em Colatina, Espírito Santo, Brasil, em plantações de café conilon, variedade clonal Emcapa 8111, genótipo 02. Foram aplicados seis níveis de nitrogênio (0, 110, 220, 440, 880 e 1320 kg N ha-1) e a resposta em características de crescimento e rendimento foi periodicamente avaliada. Houve um efeito positivo do aumento dos níveis de N sobre o rendimento, na medida em que os níveis de N que forneceram 95% do rendimento máximo (137,4 sacos ha-1 e 108,5 sacos ha-1) nas estações de crescimento 2012/2013 e 2013/2014, respectivamente, foram de 420,7 e 543,1 kg de N ha-1. Houve também um efeito positivo dos níveis de N sobre as características de crescimento e conteúdo de nitrogênio, indicando seu uso como ferramentas para um diagnóstico nutricional rápido, com o objetivo de otimizar o manejo de nitrogênio no café Conilon.

Elephant grass silage with addition of regional by-products

This study examines the effect of adding coffee husks (CH), cacao by-product (CBP) and passion fruit by-product (PBP) (fresh-matter basis) in the silage of elephant grass cv. Napier on nutritional characteristics. The experiment was laid out in a completely randomized design with a 3 × 4 factorial arrangement represented by three additives (CH, CBP or PBP) and four inclusion levels (0, 12, 24 or 36%). Four replicates were used per treatment. The material was ensiled in experimental mini-silos that were opened 60 days later for chemical analysis of the produced silages. The dry matter content of the silages with CH and PBP included at levels greater than 25% was adequate. The silage with PBP inclusion showed the highest crude protein levels and the best results for in vitro dry matter digestibility. In the silage containing CH, the neutral detergent fiber content decreased linearly with increasing inclusion of the husks. The silage with CBP showed the lowest dry matter and crude protein levels and the highest pH. In conclusion, the inclusion of up to 36% PBP in the ensiling of elephant grass is recommended, as the resulting material has potential for use in ruminant feeding at times of forage scarcity.(AU)

Applying different infective structures of Beauveria bassiana to Coffea arabica infested with Hypothenemus hampei (Coleoptera: Curculionidae) under field

Coffee is the most appreciated beverage in worldwide; Brazil is the largest producer and exporter of this commodity. Organochlorine endosulfan was banned from the country in 2013 due to its teratogenic agent-related features. Since then, coffee plantations have experienced increased Hypothenemus hampei infestation rates. The aim of the current study is to assess variations in the rates of Coffea arabica fruits brocaded by H. hampei after the application of entomopathogenic fungal species Beauveria bassiana IBCB66. Experiments were carried out with 'Catuaí' and 'Mundo Novo' cultivars between 2018 and 2020, during the borer transit period. Three experiments were carried out based on the application of the aforementioned fungal species on the investigated coffee plant species, both by spraying and sprinkling, at 30-day intervals; 10 fruits were collected per face of each useful plant in each repetition. The experiment has followed a randomized blocks design with five treatments, including the control, and five repetitions, each. Beauveria bassiana Ecobass (IBCB66) wettable powder spray, at the concentration of 2 × 1013·ha­1, was used in experiments I and II. On the other hand, the mix used in experiment III was prepared with blastospores at concentration of 5 × 1012·ha­1 blastospores + 0.1% Silwet. The sprinkling process in all three experiments has used dry aerial conidia at concentration of 2 × 1013·ha­1. Collected data were subjected to analysis of variance (ANOVA), which was followed by Fisher's test at 5% probability level, in the SISVAR software. More than 35,000 fruits were assessed. In addition to variations between experiments, results have evidenced that the rate of brocaded fruits remained high.