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1.

Studying the microbiome and its complexities: an interview with Alan Walker.

Walker, Alan W.

BMC Biol; 16(1): 134, 2018 Nov 01.

Artigo em Inglês | MEDLINE | ID: mdl-30382878

2.

Diet induced obesity is independent of metabolic endotoxemia and TLR4 signalling, but markedly increases hypothalamic expression of the acute phase protein, SerpinA3N.

Dalby, Matthew J; Aviello, Gabriella; Ross, Alexander W; Walker, Alan W; Barrett, Perry; Morgan, Peter J.

Sci Rep; 8(1): 15648, 2018 Oct 23.

Artigo em Inglês | MEDLINE | ID: mdl-30353127

3.

Dietary fibers inhibit obesity in mice, but host responses in the cecum and liver appear unrelated to fiber-specific changes in cecal bacterial taxonomic composition.

Drew, Janice E; Reichardt, Nicole; Williams, Lynda M; Mayer, Claus-Dieter; Walker, Alan W; Farquharson, Andrew J; Kastora, Stavroula; Farquharson, Freda; Milligan, Graeme; Morrison, Douglas J; Preston, Tom; Flint, Harry J; Louis, Petra.

Sci Rep; 8(1): 15566, 2018 Oct 22.

Artigo em Inglês | MEDLINE | ID: mdl-30349136

4.

Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen.

Stewart, Robert D; Auffret, Marc D; Warr, Amanda; Wiser, Andrew H; Press, Maximilian O; Langford, Kyle W; Liachko, Ivan; Snelling, Timothy J; Dewhurst, Richard J; Walker, Alan W; Roehe, Rainer; Watson, Mick.

Nat Commun; 9(1): 870, 2018 02 28.

Artigo em Inglês | MEDLINE | ID: mdl-29491419

5.

Gut microbiota trajectory in early life may predict development of celiac disease.

Olivares, Marta; Walker, Alan W; Capilla, Amalia; Benítez-Páez, Alfonso; Palau, Francesc; Parkhill, Julian; Castillejo, Gemma; Sanz, Yolanda.

Microbiome; 6(1): 36, 2018 02 20.

Artigo em Inglês | MEDLINE | ID: mdl-29458413

6.

The Impact of NOD2 Variants on Fecal Microbiota in Crohn's Disease and Controls Without Gastrointestinal Disease.

Kennedy, Nicholas A; Lamb, Christopher A; Berry, Susan H; Walker, Alan W; Mansfield, John; Parkes, Miles; Simpkins, Rachel; Tremelling, Mark; Nutland, Sarah; Parkhill, Julian; Probert, Chris; Hold, Georgina L; Lees, Charlie W.

Inflamm Bowel Dis; 24(3): 583-592, 2018 Feb 15.

Artigo em Inglês | MEDLINE | ID: mdl-29462388

7.

Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch-degrader Ruminococcus bromii.

Mukhopadhya, Indrani; Moraïs, Sarah; Laverde-Gomez, Jenny; Sheridan, Paul O; Walker, Alan W; Kelly, William; Klieve, Athol V; Ouwerkerk, Diane; Duncan, Sylvia H; Louis, Petra; Koropatkin, Nicole; Cockburn, Darrell; Kibler, Ryan; Cooper, Philip J; Sandoval, Carlos; Crost, Emmanuelle; Juge, Nathalie; Bayer, Edward A; Flint, Harry J.

Environ Microbiol; 20(1): 324-336, 2018 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-29159997

8.

Corrigendum: Shotgun metagenomics, from sampling to analysis.

Quince, Christopher; Walker, Alan W; Simpson, Jared T; Loman, Nicholas J; Segata, Nicola.

Nat Biotechnol; 35(12): 1211, 2017 Dec 08.

Artigo em Inglês | MEDLINE | ID: mdl-29220029

9.

Dietary Uncoupling of Gut Microbiota and Energy Harvesting from Obesity and Glucose Tolerance in Mice.

Dalby, Matthew J; Ross, Alexander W; Walker, Alan W; Morgan, Peter J.

Cell Rep; 21(6): 1521-1533, 2017 Nov 07.

Artigo em Inglês | MEDLINE | ID: mdl-29117558

10.

Shotgun metagenomics, from sampling to analysis.

Quince, Christopher; Walker, Alan W; Simpson, Jared T; Loman, Nicholas J; Segata, Nicola.

Nat Biotechnol; 35(9): 833-844, 2017 Sep 12.

Artigo em Inglês | MEDLINE | ID: mdl-28898207

11.

TPL-2 restricts Ccl24-dependent immunity to Heligmosomoides polygyrus.

Kannan, Yashaswini; Entwistle, Lewis J; Pelly, Victoria S; Perez-Lloret, Jimena; Walker, Alan W; Ley, Steven C; Wilson, Mark S.

PLoS Pathog; 13(7): e1006536, 2017 Jul.

Artigo em Inglês | MEDLINE | ID: mdl-28759611

12.

A non-endoscopic device to sample the oesophageal microbiota: a case-control study.

Elliott, Daffolyn R Fels; Walker, Alan W; O'Donovan, Maria; Parkhill, Julian; Fitzgerald, Rebecca C.

Lancet Gastroenterol Hepatol; 2(1): 32-42, 2017 01.

Artigo em Inglês | MEDLINE | ID: mdl-28404012

13.

Bacterial microbiota of the upper respiratory tract and childhood asthma.

Depner, Martin; Ege, Markus J; Cox, Michael J; Dwyer, Sarah; Walker, Alan W; Birzele, Lena T; Genuneit, Jon; Horak, Elisabeth; Braun-Fahrländer, Charlotte; Danielewicz, Hanna; Maier, Raina M; Moffatt, Miriam F; Cookson, William O; Heederik, Dick; von Mutius, Erika; Legatzki, Antje.

J Allergy Clin Immunol; 139(3): 826-834.e13, 2017 Mar.

Artigo em Inglês | MEDLINE | ID: mdl-27576124

14.

Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment.

Pop, Mihai; Paulson, Joseph N; Chakraborty, Subhra; Astrovskaya, Irina; Lindsay, Brianna R; Li, Shan; Bravo, Héctor Corrada; Harro, Clayton; Parkhill, Julian; Walker, Alan W; Walker, Richard I; Sack, David A; Stine, O Colin.

BMC Genomics; 17: 440, 2016 06 08.

Artigo em Inglês | MEDLINE | ID: mdl-27277524

15.

Studying the Human Microbiota.

Walker, Alan W.

Adv Exp Med Biol; 902: 5-32, 2016.

Artigo em Inglês | MEDLINE | ID: mdl-27161348

16.

Objections to the proposed reclassification of Eubacterium rectale as Agathobacter rectalis.

Sheridan, Paul O; Duncan, Sylvia H; Walker, Alan W; Scott, Karen P; Louis, Petra; Flint, Harry J.

Int J Syst Evol Microbiol; 66(5): 2106, 2016 May.

Artigo em Inglês | MEDLINE | ID: mdl-26916277

17.

Chemokine (C-C Motif) Receptor 2 Mediates Dendritic Cell Recruitment to the Human Colon but Is Not Responsible for Differences Observed in Dendritic Cell Subsets, Phenotype, and Function Between the Proximal and Distal Colon.

Bernardo, David; Durant, Lydia; Mann, Elizabeth R; Bassity, Elizabeth; Montalvillo, Enrique; Man, Ripple; Vora, Rakesh; Reddi, Durga; Bayiroglu, Fahri; Fernández-Salazar, Luis; English, Nick R; Peake, Simon T C; Landy, Jon; Lee, Gui H; Malietzis, George; Siaw, Yi Harn; Murugananthan, Aravinth U; Hendy, Phil; Sánchez-Recio, Eva; Phillips, Robin K S; Garrote, Jose A; Scott, Paul; Parkhill, Julian; Paulsen, Malte; Hart, Ailsa L; Al-Hassi, Hafid O; Arranz, Eduardo; Walker, Alan W; Carding, Simon R; Knight, Stella C.

Cell Mol Gastroenterol Hepatol; 2(1): 22-39.e5, 2016 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-26866054

18.

Assessment of the influence of intrinsic environmental and geographical factors on the bacterial ecology of pit latrines.

Torondel, Belen; Ensink, Jeroen H J; Gundogdu, Ozan; Ijaz, Umer Zeeshan; Parkhill, Julian; Abdelahi, Faraji; Nguyen, Viet-Anh; Sudgen, Steven; Gibson, Walter; Walker, Alan W; Quince, Christopher.

Microb Biotechnol; 9(2): 209-23, 2016 Mar.

Artigo em Inglês | MEDLINE | ID: mdl-26875588

19.

The Ecological Dynamics of Fecal Contamination and Salmonella Typhi and Salmonella Paratyphi A in Municipal Kathmandu Drinking Water.

Karkey, Abhilasha; Jombart, Thibaut; Walker, Alan W; Thompson, Corinne N; Torres, Andres; Dongol, Sabina; Tran Vu Thieu, Nga; Pham Thanh, Duy; Tran Thi Ngoc, Dung; Voong Vinh, Phat; Singer, Andrew C; Parkhill, Julian; Thwaites, Guy; Basnyat, Buddha; Ferguson, Neil; Baker, Stephen.

PLoS Negl Trop Dis; 10(1): e0004346, 2016 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-26735696

20.

Modulation of the human gut microbiota by dietary fibres occurs at the species level.

Chung, Wing Sun Faith; Walker, Alan W; Louis, Petra; Parkhill, Julian; Vermeiren, Joan; Bosscher, Douwina; Duncan, Sylvia H; Flint, Harry J.

BMC Biol; 14: 3, 2016 Jan 11.

Artigo em Inglês | MEDLINE | ID: mdl-26754945

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