Enrichment analysis with EpiAnnotator.
Pageaud, Yoann; Plass, Christoph; Assenov, Yassen.
; 34(10): 1781-1783, 2018 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-29329372
How computer science can help in understanding the 3D genome architecture.
DeepBlueR: large-scale epigenomic analysis in R.
SNPhood: investigate, quantify and visualise the epigenomic neighbourhood of SNPs using NGS data.
EpiCompare: an online tool to define and explore genomic regions with tissue or cell type-specific epigenomic features.
methylFlow: cell-specific methylation pattern reconstruction from high-throughput bisulfite-converted DNA sequencing.
Efficient detection of differentially methylated regions using DiMmeR.
Estimating and testing high-dimensional mediation effects in epigenetic studies.
Identification of differentially methylated loci using wavelet-based functional mixed models.
GLINT: a user-friendly toolset for the analysis of high-throughput DNA-methylation array data.
StereoGene: rapid estimation of genome-wide correlation of continuous or interval feature data.