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1.
Rev Med Liege ; 77(7-8): 413-415, 2022 Jul.
Artigo em Francês | MEDLINE | ID: mdl-35924493

RESUMO

We report the case of a 67-year-old female patient presenting swelling of the hands and feet and pain in both legs. Clinical examination and bone scintigraphy identify the triad "digital clubbing - arthritis - bilateral periostitis of the long bones", leading to a diagnosis of hypertrophic osteoarthropathy, a syndrome usually associated with pulmonary neoplasia. The thoracic CT-scan, followed by a biopsy, effectively diagnosed a right upper lobe adenocarcinoma. Surgical treatment of the neoplasia allowed the resolution of the clinical complaints and the pathological scintigraphic findings.


Nous rapportons le cas d'une patiente de 67 ans présentant des gonflements des mains et des pieds ainsi que des douleurs des deux jambes. L'examen clinique et la scintigraphie osseuse identifient la triade «hippocratisme digital - arthrites - périostite bilatérale des os longs¼, permettant de poser un diagnostic d'ostéoarthropathie hypertrophique, un syndrome habituellement associé à une néoplasie pulmonaire. Le scanner thoracique, suivi d'une biopsie, ont en effet diagnostiqué un adénocarcinome localisé au niveau du lobe supérieur droit. La prise en charge chirurgicale de la néoplasie a permis la résolution des plaintes cliniques et de l'aspect scintigraphique pathologique.


Assuntos
Adenocarcinoma , Artrite , Neoplasias Pulmonares , Osteoartropatia Hipertrófica Secundária , Periostite , Adenocarcinoma/complicações , Idoso , Artrite/complicações , Feminino , Humanos , Neoplasias Pulmonares/complicações , Osteoartropatia Hipertrófica Secundária/complicações , Osteoartropatia Hipertrófica Secundária/etiologia , Periostite/diagnóstico por imagem , Periostite/etiologia
4.
Int J Radiat Biol ; 82(9): 681-5, 2006 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-17050481

RESUMO

PURPOSE: To determine whether extensive use of mobile phones affects brain metabolites detectable by proton magnetic resonance spectroscopy (1H MRS). MATERIALS AND METHODS: Twenty-one extensive mobile phone users (average use = 5.5 +/- 2.2 years at 2.4 +/- 1.1 hours/day) and 15 control subjects were recruited and submitted to a 1H MRS brain examination at 1.5 Tesla. Data were recorded in the most exposed right temporal and pontobulbar areas as well as in the contralateral left temporal area. The ratios of N-acetylaspartate (NAA), choline (Cho) and myo-inositol (mI) to creatine/phosphocreatine (Cr) were measured. RESULTS: No statistically significant changes in the NAA/Cr, Cho/Cr and mI/Cr ratios were measured between mobile phone users and control subjects and between the exposed and contralateral temporal areas. CONCLUSION: These results indicate that extensive exposition to mobile phone radiation does not cause MRS-detectable brain metabolic changes.


Assuntos
Encéfalo/metabolismo , Encéfalo/efeitos da radiação , Telefone Celular , Espectroscopia de Ressonância Magnética/métodos , Micro-Ondas , Neurotransmissores/análise , Monitoramento de Radiação/métodos , Adulto , Carga Corporal (Radioterapia) , Feminino , Humanos , Masculino , Prótons , Doses de Radiação , Eficiência Biológica Relativa
5.
Br J Radiol ; 79(940): 308-14, 2006 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-16585723

RESUMO

The assessment of the effectiveness of MRI-guided focused ultrasound surgery (MRIgFUS) of breast carcinomas can be performed by dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) parameters which monitor the presence of residual tumour. The aim of this study was to evaluate the effect of the post-treatment delay on this assessment. DCE-MRI data were acquired immediately and 3-14 days after MRIgFUS treatment of 26 tumours (<7 days, n = 6; = or > ge;7 days, n = 20). The percentage of residual tumour was determined histologically on the resected mass and correlated with two DCE-MRI parameters: increase in signal intensity (ISI) and positive enhancement integral (PEI). No correlation could be found between DCE-MRI data acquired immediately after treatment and the percentage of residual tumour. Good correlation coefficients were found for data acquired several days after treatment (ISI, r = 0.749; PEI, r = 0.778). However, they were higher when the post-treatment time interval was 7 days or more (ISI, r = 0.962; PEI, r = 0.934). These results suggest that a post-treatment delay of 7 days is necessary for the accurate assessment of the presence of residual tumour by DCE-MRI parameters.


Assuntos
Neoplasias da Mama/diagnóstico , Carcinoma Ductal de Mama/diagnóstico , Aumento da Imagem , Imageamento por Ressonância Magnética/métodos , Neoplasia Residual/diagnóstico , Terapia por Ultrassom/métodos , Idoso , Idoso de 80 Anos ou mais , Neoplasias da Mama/patologia , Neoplasias da Mama/terapia , Carcinoma Ductal de Mama/patologia , Carcinoma Ductal de Mama/terapia , Feminino , Humanos , Processamento de Imagem Assistida por Computador , Pessoa de Meia-Idade , Neoplasia Residual/patologia , Neoplasia Residual/terapia , Curva ROC , Sensibilidade e Especificidade , Fatores de Tempo , Ultrassonografia Mamária
6.
Biochim Biophys Acta ; 607(1): 65-80, 1980 Mar 28.
Artigo em Inglês | MEDLINE | ID: mdl-6989402

RESUMO

Glutaminyl-tRNA synthetase from Escherichia coli has been purified to homogeneity with a yield of about 50%. It is a monomer of about 69 000 daltons. Arginyl and glutamyl-tRNA synthetases are also monomeric synthetases of molecular weight significantly lower than 100 000. In addition it is well known that these three synthetases require their cognate tRNA to catalyze the [32P]PPi-ATP exchange. Like arginyl-tRNA synthetase, but unlike glutamyl-tRNA synthetase, glutaminyl-tRNA synthetase seems to contain some repeated sequences. Therefore no correlation can be established between the tRNA requirement of these synthetases for the catalysis of the isotope-exchange and the presence or the absence of sequence duplication. In the native enzyme four sulfhydryl groups react with dithiobisnitrobenzoic acid causing a loss of both the aminoacylation and the [32P]PPi-ATP exchange activities. The rate-limiting steps of the overall aminoacylation and its reverse reaction correspond, respectively, to the catalysis of the aminoacylation of tRNA Gln and of the the deacylation of glutaminyl-tRNA Gln. At acidic pH, glutaminyl-tRNA synthetase catalyzes the synthesis of the glutaminyl-tRNA Gln and its deacylation at significantly lower rates than the [32P]PPi-ATP exchange, indicating than glutaminyl-tRNA Gln cannot be an obligatory intermediate in this isotope exchange. These results suggest the existence of a two-step aminoacylation mechanism catalyzed by this enzyme.


Assuntos
Aminoacil-tRNA Sintetases/isolamento & purificação , Escherichia coli/enzimologia , Aminoácidos/análise , Aminoacil-tRNA Sintetases/metabolismo , Glutamato-tRNA Ligase/metabolismo , Glutamina/isolamento & purificação , Cinética , Peso Molecular , Espermidina/farmacologia , Compostos de Sulfidrila/metabolismo
7.
Biochim Biophys Acta ; 624(1): 130-41, 1980 Jul 24.
Artigo em Inglês | MEDLINE | ID: mdl-6996739

RESUMO

Recent studies have shown that those synthetases with subunits greater than 85,000 daltons contain extensive repeated sequences, whilst those with small subunits (40,000 daltons) do not. We have undertaken a comparative study of four aminoacyl-tRNA synthetases (glutamyl-, arginyl-, valyl-, and phenylalanyl-tRNA synthetases) with subunit sizes ranging from 56,000 to 130,000 daltons in an attempt to correlate the occurrence and extent of the repeats with the length of the polypeptide chain. Our results show that monomeric glutamyl-tRNA synthetase from Escherichia coli (56,000 daltons) contains few repeated sequences, whereas both subunits of yeast phenylalanyl-tRNA synthetase (alpha, 73,000 daltons; beta, 62,000 daltons) and yeast arginyl-tRNA synthetase (74,000 daltons) do have a significant amount of repeats. Thus 56,000 dalton appears to be the minimum size compatible with the existence of such repeats.


Assuntos
Aminoacil-tRNA Sintetases/análise , Arginina-tRNA Ligase/análise , Glutamato-tRNA Ligase/análise , Fenilalanina-tRNA Ligase/análise , Valina-tRNA Ligase/análise , Sequência de Aminoácidos , Escherichia coli/enzimologia , Peso Molecular , Fragmentos de Peptídeos/isolamento & purificação , Tripsina
8.
Biochim Biophys Acta ; 856(1): 85-90, 1986 Mar 27.
Artigo em Inglês | MEDLINE | ID: mdl-3955036

RESUMO

The interaction of the local anesthetic tetracaine with phosphatidylserine-containing model membranes has been studied by 2H-NMR. Charged tetracaine exhibited an unusually large partition coefficient into multilamellar dispersions of phosphatidylserine. The 2H-NMR spectra consisted of a Pake doublet and a narrow line, with the former corresponding to tetracaine in the bilayer and the latter to tetracaine free in solution. A strong pH dependence of the quadrupole splittings indicated different membrane locations for charged and uncharged tetracaine. In equimolar mixtures of phosphatidylserine and phosphatidylcholine the partition coefficients and 2H-NMR spectra were much more like those observed in neat phosphatidylcholine than in neat phosphatidylserine. Dilution studies at pH 5.5 indicated that in phosphatidylserine/phosphatidylcholine mixtures tetracaine experiences a three-site exchange similar to that found earlier for tetracaine in phosphatidylcholine. Tetracaine is in fast exchange between sites weakly bound to membrane and free in solution, and in slow exchange with a strongly bound site in the membrane.


Assuntos
Bicamadas Lipídicas , Fosfatidilserinas , Tetracaína , Deutério , Concentração de Íons de Hidrogênio , Espectroscopia de Ressonância Magnética , Fosfatidilcolinas , Solubilidade
9.
Biochim Biophys Acta ; 685(3): 315-28, 1982 Mar 08.
Artigo em Inglês | MEDLINE | ID: mdl-7199938

RESUMO

The binding of the local anesthetics tetracaine and procaine to model membranes of egg phosphatidylcholine and bovine phosphatidylserine has been studied by 2H-NMR and light absorption. Dispersions of drug-lipid mixtures in 0.1 M NaCl were centrifuged and the concentration of drug in the supernatant was measured by ultraviolet light absorption. Several freeze-thaw cycles of the sample were used before centrifugation to facilitate equilibration of the drug between the bilayers. Binding curves for the drug were obtained as a function of pH. The results were simulated by a theoretical model based on the Gouy-Chapman theory, in which both the charged and the uncharged forms of the drug, and the equilibrium between them, were included. Two deuterated forms of the drugs, [2H6] tetracaine and [2H4] procaine, were used for the 2H-NMR experiments. In most cases the 2H-NMR spectrum contained a broad central resonance and an underlying quadrupolar pattern. However, after five freeze-thaw cycles only a single broad resonance was observed under most conditions. Particle size measurements showed that freeze-thawing resulted in a more uniform population of liposomes of smaller average diameter than those obtained by simple vortex mixing. The single broad resonance observed in both cases is interpreted as due to rapid exchange of the anesthetic between lipid and bulk solution. In the absence of freeze-thawing, the quadrupolar pattern is attributed to anesthetic species in exchange with only a limited amount of water. The data suggest that a true equilibrium between lipid, water and anesthetic is only attained after freeze-thawing.


Assuntos
Bicamadas Lipídicas , Fosfatidilcolinas , Fosfatidilserinas , Procaína , Tetracaína , Animais , Bovinos , Galinhas , Gema de Ovo , Feminino , Congelamento , Concentração de Íons de Hidrogênio , Espectroscopia de Ressonância Magnética , Matemática , Relação Estrutura-Atividade
10.
Biochim Biophys Acta ; 741(2): 244-50, 1983 Nov 17.
Artigo em Inglês | MEDLINE | ID: mdl-6360212

RESUMO

Phenylalanyl-tRNA synthetase (EC 6.1.1.20) has been purified to homogeneity from a 100-fold overproducing Escherichia coli strain carrying a hybrid pBR322 plasmid containing the pheS-pheT locus. The purified enzyme is identical to the phenylalanyl-tRNA synthetase isolated form an haploid strain. The enzyme was found to dissociate in the presence of 0.5 M NaSCN and the alpha- and beta-subunits composing the native alpha 2 beta 2 enzyme were separated by gel filtration. Neither isolated subunit showed significant catalytic activity. A complex indistinguishable from the native enzyme with full catalytic activity is recovered upon mixing the subunits. The N- and C-terminal sequences and the amino acid composition of each subunit were determined. They are compared to the available data concerning the primary structure of the subunits, as deduced from nucleotide sequencing of the pheS-pheT operon.


Assuntos
Aminoacil-tRNA Sintetases/isolamento & purificação , Escherichia coli/enzimologia , Fenilalanina-tRNA Ligase/isolamento & purificação , Sequência de Aminoácidos , Escherichia coli/genética , Substâncias Macromoleculares , Peso Molecular , Fragmentos de Peptídeos/análise , Fenilalanina-tRNA Ligase/genética
11.
Biochim Biophys Acta ; 697(1): 71-7, 1982 Apr 26.
Artigo em Inglês | MEDLINE | ID: mdl-6805515

RESUMO

Chloroplastic and cytoplasmic valyl- and leucyl-tRNA synthetases purified from Euglena gracilis show a monomeric structure. The molecular weights of the two valyl-tRNA synthetases are identical (126,000) while those of the leucyl-tRNA synthetases are different (100 000 for the chloroplastic and 116 000 for the cytoplasmic enzyme). The tryptic maps and the amino acid compositions reveal differences between the chloroplastic valyl- and leucyl-tRNA synthetases and their cytoplasmic homologues. These results suggest that a chloroplastic aminoacyl-tRNA synthetase and its cytoplasmic counterpart are coded for by distinct genes.


Assuntos
Aminoacil-tRNA Sintetases/isolamento & purificação , Cloroplastos/enzimologia , Euglena gracilis/enzimologia , Leucina-tRNA Ligase/isolamento & purificação , Valina-tRNA Ligase/isolamento & purificação , Aminoácidos/análise , Animais , Citoplasma/enzimologia , Genes , Leucina-tRNA Ligase/genética , Leucina-tRNA Ligase/metabolismo , Peso Molecular , Fragmentos de Peptídeos/análise , Valina-tRNA Ligase/genética , Valina-tRNA Ligase/metabolismo
12.
FEBS Lett ; 163(2): 175-80, 1983 Nov 14.
Artigo em Inglês | MEDLINE | ID: mdl-6357853

RESUMO

Several lines of evidence establish that the crystallizable aspartyl-tRNA synthetase from Baker's yeast contains some covalently bound glucose: (i) a positive staining of the enzyme was obtained after polyacrylamide gel electrophoresis followed by the concanavalin A-peroxidase test which is specific for glucose and mannose containing proteins; (ii) thin-layer chromatography and gas-liquid chromatography revealed the presence of glucose in enzyme hydrolysates; (iii) immunoaffinoelectrophoresis in agarose gels containing concanavalin A and antibodies raised against aspartyl-tRNA synthetase showed that the enzyme was able to precipitate entirely in the lectin. Finally incubation of the enzyme with [14C]glucose or [14C]glucose 6-phosphate led to the incorporation of radioactivity into trichloroacetic acid-precipitable protein. Indeed immunoprecipitation of [14C]glucose-labelled aspartyl-tRNA synthetase with specific antibodies using the rocket method followed by autoradiography gave a radioactive peak. This last result also demonstrates the possibility of in vitro glycosylation of yeast aspartyl-tRNA synthetase.


Assuntos
Aminoacil-tRNA Sintetases/metabolismo , Aspartato-tRNA Ligase/metabolismo , Saccharomyces cerevisiae/enzimologia , Marcadores de Afinidade , Fenômenos Químicos , Química , Eletroforese/métodos , Glucose/metabolismo , Glucose-6-Fosfato , Glucofosfatos/metabolismo , Imunoeletroforese , Ligação Proteica
13.
FEBS Lett ; 242(2): 351-6, 1989 Jan 02.
Artigo em Inglês | MEDLINE | ID: mdl-2644133

RESUMO

Native cytoplasmic phenylalanyl-tRNA synthetase from baker's yeast is a tetramer of the alpha 2 beta 2 type. On mild tryptic cleavage it gives rise to a modified alpha 2 beta 2 form that has lost the tRNA(Phe) binding capacity but is still able to activate phenylalanine. In this paper are presented data concerning peptides released by this limited proteolytic conversion as well as those arising from exhaustive tryptic digestion of the truncated beta subunit. Each purified peptide was unambiguously assigned to a unique stretch of the beta subunit amino acid sequence that was recently determined via gene cloning and DNA sequencing. Together with earlier results from affinity labelling studies the present data show that the Lys 172-Ile 173 bond is the unique target of trypsin under mild conditions and that the N-terminal domain of each beta subunit (residues 1-172) contains the major tRNA(Phe) binding sites.


Assuntos
Aminoacil-tRNA Sintetases , Fenilalanina-tRNA Ligase , RNA de Transferência Aminoácido-Específico , RNA de Transferência de Fenilalanina , Saccharomyces cerevisiae/enzimologia , Sequência de Aminoácidos , Sítios de Ligação , Dados de Sequência Molecular , Estrutura Molecular , Fragmentos de Peptídeos/análise
14.
Biochimie ; 65(7): 379-88, 1983 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-6414527

RESUMO

The cristallizable aspartyl-tRNA synthetase from Baker's yeast is a dimer made up of identical subunits (Mr 60,000). We report here the results of tryptic digestion and cyanogen bromide cleavage which enabled us to align two lon stretches of sequence of 106 and 111 amino acids, respectively.


Assuntos
Aminoacil-tRNA Sintetases , Aspartato-tRNA Ligase , Fragmentos de Peptídeos/análise , Saccharomyces cerevisiae/enzimologia , Sequência de Aminoácidos , Aminoácidos/análise , Fenômenos Químicos , Química , Brometo de Cianogênio , Hidrólise , Tripsina
15.
Biochimie ; 70(9): 1179-84, 1988 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-3147710

RESUMO

Datura stramonium contains a compound that impairs learning retention in mice. It has been purified to homogeneity and its structure has been established as that of a gamma-L-glutamyl-L-aspartate. The biological activity of this pseudodipeptide has been found to be identical with that of the corresponding synthetic one. It has also been compared to those of various synthetic di- and tripeptides containing L- and/or D-enantiomers of the constitutive amino acids. The results show that the activity is associated with a peptidic structure containing only one type of enantiomer.


Assuntos
Aprendizagem da Esquiva/efeitos dos fármacos , Datura stramonium/análise , Dipeptídeos/isolamento & purificação , Plantas Medicinais , Plantas Tóxicas , Sequência de Aminoácidos , Animais , Dipeptídeos/farmacologia , Eletroforese em Gel de Poliacrilamida , Camundongos
16.
Biochimie ; 67(6): 607-13, 1985 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-3902099

RESUMO

The crystallizable cytoplasmic aspartyl-tRNA synthetase from Saccharomyces cerevisiae is a dimer made up of identical subunits (Mr 63 000). Its primary structure was established using peptide sequences from four different digests of the native and citraconylated enzyme with trypsin, cyanogen bromide and staphylococcal protease. The oligonucleotide sequence of the structural gene was used as a template for the final alignment of the various peptides in the correct order.


Assuntos
Aminoacil-tRNA Sintetases , Aspartato-tRNA Ligase , Metaloendopeptidases , Saccharomyces cerevisiae/enzimologia , Sequência de Aminoácidos , Aminoacil-tRNA Sintetases/metabolismo , Aspartato-tRNA Ligase/metabolismo , Brometo de Cianogênio , Citoplasma/enzimologia , Endopeptidases/metabolismo , Fragmentos de Peptídeos/metabolismo , Tripsina/metabolismo
17.
Biochimie ; 68(10-11): 1225-30, 1986.
Artigo em Inglês | MEDLINE | ID: mdl-3098307

RESUMO

Monguine, a thermostable toxic protein was extracted from the seeds of Croton mongue (Euphorbiaceae) and purified by ion-exchange chromatography on DEAE-cellulose and gel filtration on Sephadex G-25 and G-15. Polyacrylamide gel electrophoresis of purified monguine in the presence of sodium dodecyl sulfate and after treatment with 2-mercaptoethanol showed one band corresponding to a molecular weight of 9000. The same molecular weight was determined by analytical centrifugation. Amino acid analysis revealed a high content in both aspartic and glutamic acids (or the corresponding amides). The LD50 (24 h) is 12 mg/kg of mouse body weight. Monguine inhibits protein synthesis in hepatoma tissue culture cells and globin synthesis in a rabbit reticulocyte lysate.


Assuntos
Sementes/análise , Toxinas Biológicas/isolamento & purificação , Aminoácidos/análise , Animais , Bioensaio , Fenômenos Químicos , Físico-Química , Cromatografia , Eletroforese em Gel de Poliacrilamida , Dose Letal Mediana , Neoplasias Hepáticas Experimentais/metabolismo , Masculino , Camundongos , Biossíntese de Proteínas , Coelhos , Reticulócitos/metabolismo , Toxinas Biológicas/farmacologia , Toxinas Biológicas/toxicidade
18.
Biochimie ; 68(10-11): 1217-23, 1986.
Artigo em Inglês | MEDLINE | ID: mdl-3098306

RESUMO

A toxic protein of Mr 22,000, called bolaffinine, has been purified from the mushroom, Boletus affinis Peck (Boletaceae), with a 0.65% yield using a procedure involving four steps: ammonium sulfate precipitation, two chromatographies on ion-exchange columns and gel filtration on Sephadex G-75. It is thermolabile and can be inactivated by organic solvents. Its isoelectric point lies between pH 9 and 10. It contains 234 amino acids, no free SH groups and one disulfide bridge as evidenced by reactions with 5-5'-dithiobis-nitrobenzoate (DTNB) and 2-mercaptoethanol. When injected into mice, it provokes the death of animals within 16-24 h. The 24 h LD50 is 61 mg/kg of body weight. Bolaffinine inhibits protein synthesis in hepatoma tissue culture and in a rabbit reticulocyte lysate.


Assuntos
Basidiomycota/análise , Proteínas Fúngicas/isolamento & purificação , Micotoxinas , Aminoácidos/análise , Animais , Bioensaio , Fenômenos Químicos , Precipitação Química , Físico-Química , Cromatografia , Proteínas Fúngicas/farmacologia , Proteínas Fúngicas/toxicidade , Dose Letal Mediana , Neoplasias Hepáticas Experimentais/metabolismo , Masculino , Camundongos , Biossíntese de Proteínas , Coelhos , Reticulócitos/efeitos dos fármacos , Reticulócitos/metabolismo
19.
Biochimie ; 57(10): 1167-76, 1975.
Artigo em Inglês | MEDLINE | ID: mdl-4150

RESUMO

Two forms of baker's yease valyl-tRNA synthetase have been purified to apparent homogeneity by classical methods. It was demonstrated that one of the two forms of the enzyme originates from the other by proteolysis, the respective amounts of each form depending on the physiological state of the yeast. The species mainly isolated from exponential growing yeast cells is a monomer of 130,000 daltons molecular weight. In stationary phase cells or in commercial yeast the major species is a degraded monomer of 120,000 daltons molecular weight ; however when the purification is carried out in the presence of phenylmethyl-sulphonyl fluoride, or diisopropylfluorophosphate large amounts of the not - degreded monomer can be obtained. Of great practical usefulness is the fact that large amounts of the native enzyme can be obtained pure after only two chromatographic steps on DEAE-cellulose and hydroxylapatite. The kinetic constants for valine, ATP and tRNAVal were determined, as well as the optimum aminoacylation conditions. It was found that the specific activity of the nondegraded valyl-tRNA synthetase is higher than that of the proteolysed enzyme for the aminoacylation reaction. On the contrary, both forms have the same ATP-pyroposphate exchange activity. The amino acids composition of the native enzyme was established. The tryptic fingerprints of the two valyl-tRNA synthetases were studied. Essentially similar maps were obtained. The number of the spots in the fingerprints indicates that the enzymes contain a high proportion of repeated sequences.


Assuntos
Aminoacil-tRNA Sintetases/metabolismo , Saccharomyces cerevisiae/enzimologia , Valina-tRNA Ligase/metabolismo , Trifosfato de Adenosina/metabolismo , Aminoácidos/análise , Divisão Celular , Difosfatos/metabolismo , Concentração de Íons de Hidrogênio , Isoflurofato , Cinética , Magnésio/farmacologia , Peso Molecular , Fluoreto de Fenilmetilsulfonil , RNA de Transferência/metabolismo , Tripsina , Valina/metabolismo , Valina-tRNA Ligase/isolamento & purificação
20.
J Med Chem ; 39(13): 2492-8, 1996 Jun 21.
Artigo em Inglês | MEDLINE | ID: mdl-8691446

RESUMO

The YSPTSPSY peptide is a DNA-bisintercalator that can adopt nonrandom conformations in solution. Strategies based on random conformational search and energy minimizations have been applied to generate populations of conformers characterizing YSPTSPSY. Subsequent analysis based on statistical methods and clustering allowed to determine the existence of four classes of conformers containing beta- and/or gamma-turns. NMR spectra of YSPTSPSY in solution provide evidence for such structures. Employing a Monte Carlo-based docking procedure, the YSPTSPSY peptide was docked in a DNA double-helical fragment with the sequence [d(GACGTC)]2. The peptide binds on the minor groove of DNA stacking the central CG base pairs, in a manner similar to that observed in complexes of triostin A with DNA. Upon binding, the structure of the C-terminal segment is modified into a type I beta-turn. Five intermolecular hydrogen bonds are observed, but the van der Waals interactions constitute the major stabilization factor for the complex. NMR chemical shifts, coupling constants, and NOESY connectivities are in agreement with the molecular model.


Assuntos
DNA/metabolismo , Substâncias Intercalantes/química , Substâncias Intercalantes/metabolismo , Oligopeptídeos/química , Oligopeptídeos/metabolismo , Sequência de Aminoácidos , Antibacterianos/metabolismo , Composição de Bases , Ligação de Hidrogênio , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Dados de Sequência Molecular , Método de Monte Carlo , Oligopeptídeos/farmacologia , Conformação Proteica , Estrutura Secundária de Proteína , Quinoxalinas/química , Quinoxalinas/metabolismo
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