Combining near infrared spectra of feces and geostatistics to generate forage nutritional quality maps across landscapes.

An important asset for the management of wild ungulates is recognizing the spatial distribution of forage quality across heterogeneous landscapes. To do so typically requires knowledge of which plant species are eaten, in what abundance they are eaten, and what their nutritional quality might be. Acquiring such data, however, may be difficult and time consuming. Here, we are proposing a rapid and cost-effective forage quality monitoring tool that combines near infrared (NIR) spectra of fecal samples and easily obtained data on plant community composition. Our approach rests on the premise that NIR spectra of fecal samples collected within low population density exclosures reflect the optimal forage quality of a given landscape. Forage quality can thus be based on the Mahalanobis distance of fecal spectral scans across the landscape relative to fecal spectral scans inside exclosures (referred to as DISTEX). The Gi* spatial autocorrelation statistic can then be applied among neighboring DISTEX values to detect and map "hot spots" and "cold spots" of nutritional quality over the landscape. We tested our approach in a heterogeneous boreal landscape on Anticosti Island (Québec, Canada), where white-tailed deer (Odocoileus virginianus) populations over the landscape have ranged from 20 to 50 individuals/km2 for at least 80 years, resulting in a loss of most palatable and nutritious plant species. Our results suggest that hot spots of forage quality occur when old-growth balsam fir stands comprise >39.8% of 300 ha neighborhoods, whereas cold spots occur in laggs (i.e., transition zones from forest to peatland). In terms of ground-level indicator plant species, the presence of Canada bunchberry (Cornus canadensis) was highly correlated with hot spots, whereas tamarack (Larix laricina) was highly correlated with cold spots. Mean DISTEX values were positively and significantly correlated with the neutral detergent fiber and acid detergent lignin contents of feces. While our approach would need more independent field trials before it is fully validated, its low cost and ease of execution should make it a valuable tool for advancing both the basic and applied ecology of large herbivores.

Non-native earthworms increase the abundance and diet quality of a common woodland salamander in its northern range.

Non-native earthworms found in Eastern Canada substantially affect soil properties and plant diversity, but less is known about their impacts on higher faunal species. We investigated the effects of non-native earthworms on populations of Plethodon cinereus, a common woodland salamander. We hypothesized that earthworms could adversely affect P. cinereus by consuming the forest floor, thereby decreasing soil moisture and the abundance of native preys. Conversely, earthworms could positively affect P. cinereus by providing refuge in their abandoned burrows and by being a novel prey. We installed 25 coverboards in 38 mature sugar maple (Acer saccharum) forests, 24 of which were earthworm-free. Over the next two years, we monitored earthworm and salamander populations using hot mustard extractions and visible implant elastomers, respectively. At a subset of four sites, two with and two without earthworms, we determined salamander diets in the spring (May-June), summer (July-August) and fall (September-October) seasons, using gastric lavage techniques. Forest floor depth decreased, whereas population density, body size and total prey volume of P. cinereus increased, with earthworm abundance. Earthworms, which are soft-bodied and nutritious prey, composed most of the salamander diet at sites with earthworms, volumetrically accounting for > 50% of total prey volume. Despite this, we found fewer prey items in the stomach of salamanders at earthworm-invaded sites, indicating that salamanders are getting a higher caloric intake per feeding while expending less energy. We conclude that non-native earthworms have a net beneficial effect on P. cinereus populations in Eastern Canada, mainly by improving diet quality. Supplementary Information: The online version contains supplementary material available at 10.1007/s10530-023-03168-3.

Global data on earthworm abundance, biomass, diversity and corresponding environmental properties.

Earthworms are an important soil taxon as ecosystem engineers, providing a variety of crucial ecosystem functions and services. Little is known about their diversity and distribution at large spatial scales, despite the availability of considerable amounts of local-scale data. Earthworm diversity data, obtained from the primary literature or provided directly by authors, were collated with information on site locations, including coordinates, habitat cover, and soil properties. Datasets were required, at a minimum, to include abundance or biomass of earthworms at a site. Where possible, site-level species lists were included, as well as the abundance and biomass of individual species and ecological groups. This global dataset contains 10,840 sites, with 184 species, from 60 countries and all continents except Antarctica. The data were obtained from 182 published articles, published between 1973 and 2017, and 17 unpublished datasets. Amalgamating data into a single global database will assist researchers in investigating and answering a wide variety of pressing questions, for example, jointly assessing aboveground and belowground biodiversity distributions and drivers of biodiversity change.

Lowbush blueberry fruit yield and growth response to inorganic and organic N-fertilization when competing with two common weed species.

Inorganic N fertilizers are commonly used in commercial blueberry fields; however, this form of N can favor increased weed species' growth, which can ultimately reduce the benefits of fertilization. We hypothesized that chipped ramial wood (CRW) compost is an effective alternative organic fertilizer for blueberry plants when weeds are present, as ericaceous shrub species are generally more efficient in utilizing organic N than herbaceous weed species. In this study, we measured the growth, fruit yield, and foliar N response of lowbush blueberry (Vaccinium angustifolium Aiton) to an application of 45 kg N ha-1 in the form of organic (CRW) or inorganic N (ammonium sulfate) in two areas of a commercial field colonized by either poverty oat grass (Danthonia spicata (L.) Beauv.) or sweet fern (Comptonia peregrina (L.) Coult.). We also assessed the impact of the fertilization treatments on litter decomposition rates. Contrary to our hypothesis, we found no significant increase in blueberry fruit yield or growth using CRW. By contrast, inorganic N-fertilization increased fruit yield by 70%. The effect was higher in the area colonized by D. spicata (+83%) than by C. peregrina (+45%). Blueberry fruit yield was on average twice higher in the area of the field having D. spicata than C. peregrina, suggesting a stronger competition with the latter. However, the increase in D. spicata density from 0-1 to >25 plants m-2 reduced fruit production by three-fold and strongly impacted vegetative growth in both fertilized and unfertilized plots. The impact of increased C. peregrina density was comparatively much lower, especially on vegetative growth, which was much higher in the area having C. peregrina. These patterns are likely due to a lower competition for N uptake with C. peregrina as this species can derive N from the atmosphere. Interestingly, the higher fruit yield in the area colonized by D. spicata occurred even in plots where the weeds were nearly absent (density of 0-1 plant m-2), revealing the influence of unidentified variables on blueberry fruit yield. We hypothesized that this difference resulted from over-optimal foliar N concentrations in the area colonized by C. peregrina as suggested by the significantly higher foliar N concentrations and by the negative correlation between foliar N concentrations and fruit yields in this area. The possibility of an influence of C. peregrina on flowering and pollination success, as well as of unidentified local site conditions is discussed. The tested N-fertilization treatments did not affect foliar N concentrations or litter decomposition rates. Overall, our results show that ammonium sulfate is very effective at increasing fruit yields but that both fruit yields and the efficiency of the N-fertilization treatment are decreased by increased D. spicata density, especially above 25 plants m-2. Although CRW did not significantly enhance fruit yields in the short term, this fertilizer may have a long-term beneficial effect.

Contrasting impacts of two weed species on lowbush blueberry fertilizer nitrogen uptake in a commercial field.

Numerous studies have speculated that lowbush blueberry (Vaccinium angustifolium) is less efficient than weed species at taking up inorganic nitrogen (N) derived from fertilizers, thus raising questions as to the effectiveness of N fertilization in commercial fields. However, competition for acquiring N as well as specific interactions between blueberry and companion weeds characterized by contrasted functional traits remain poorly documented. Here, we assessed fertilizer-derived N acquisition efficiency and biomass production in lowbush blueberry and two common weed species that have different functional traits-sweet fern (Comptonia peregrina), a N2-fixing shrub, and poverty oat grass (Danthonia spicata), a perennial grass-in a commercial blueberry field in Québec, Canada. In 2015, 15N-labelled ammonium sulfate was applied at a rate of 45 kg ha-1 to 1 m2 field plots containing lowbush blueberry and one of the two weeds present at several different density levels (0 to 25 plants m-2). In 2016, each plot was harvested to determine vegetative biomass and the percentage of fertilizer-derived N recovered (PFNR) in each species. The PFNR was higher in blueberry (24.4 ± 9.3%) than in sweet fern (13.4 ± 2.6%) and poverty oat grass (3.3 ± 2.9%). However, lowbush blueberry required about four times more root biomass than sweet fern and poverty oat grass to uptake an equivalent amount of N from ammonium sulfate. The PFNR in poverty oat grass increased with plant density (from 0.8% to 6.4% at 2-3 and >6 plants m-2, respectively), which resulted in a decrease in blueberry's PFNR (from 26.0 ± 1.4% to 8.6 ± 1.8%) and aboveground vegetative biomass production (from 152 ± 58 to 80 ± 28 g m-2). The increase in biomass production and N content in sweet fern with increasing plant density was not accompanied by an increase in PFNR (29.7 ± 8.4%), suggesting an increasing contribution of atmospherically-derived N. This mechanism (i.e., N sparing) likely explained blueberry's higher biomass production and N concentration in association with sweet fern than with poverty oat grass. Overall, our study confirms lowbush blueberry low efficiency (on a mass basis) at taking up N derived from the fertilizer as compared to weeds and reveals contrasted and complex interactions between blueberry and both weed species. Our results also suggest that the use of herbicides may not be necessary when poverty oat grass is present at a low density (<15 plants of poverty oat grass m-2) and that adding inorganic N fertilizer is counterproductive when this species is present at a high density as it takes up as much fertilizer as lowbush blueberry.

Nine years of in situ soil warming and topography impact the temperature sensitivity and basal respiration rate of the forest floor in a Canadian boreal forest.

The forest floor of boreal forest stores large amounts of organic C that may react to a warming climate and increased N deposition. It is therefore crucial to assess the impact of these factors on the temperature sensitivity of this C pool to help predict future soil CO2 emissions from boreal forest soils to the atmosphere. In this study, soil warming (+2-4°C) and canopy N addition (CNA; +0.30-0.35 kg·N·ha-1·yr-1) were replicated along a topographic gradient (upper, back and lower slope) in a boreal forest in Quebec, Canada. After nine years of treatment, the forest floor was collected in each plot, and its organic C composition was characterized through solid-state 13C nuclear magnetic resonance (NMR) spectroscopy. Forest floor samples were incubated at four temperatures (16, 24, 32 and 40°C) and respiration rates (RR) measured to assess the temperature sensitivity of forest floor RR (Q10 = e10k) and basal RR (B). Both soil warming and CNA had no significant effect on forest floor chemistry (e.g., C, N, Ca and Mg content, amount of soil organic matter, pH, chemical functional groups). The NMR analyses did not show evidence of significant changes in the forest floor organic C quality. Nonetheless, a significant effect of soil warming on both the Q10 of RR and B was observed. On average, B was 72% lower and Q10 45% higher in the warmed, versus the control plots. This result implies that forest floor respiration will more strongly react to changes in soil temperature in a future warmer climate. CNA had no significant effect on the measured soil and respiration parameters, and no interaction effects with warming. In contrast, slope position had a significant effect on forest floor organic C quality. Upper slope plots had higher soil alkyl C:O-alkyl C ratios and lower B values than those in the lower slope, across all different treatments. This result likely resulted from a relative decrease in the labile C fraction in the upper slope, characterized by lower moisture levels. Our results point towards higher temperature sensitivity of RR under warmer conditions, accompanied by an overall down-regulation of RR at low temperatures (lower B). Since soil C quantity and quality were unaffected by the nine years of warming, the observed patterns could result from microbial adaptations to warming.

Global distribution of earthworm diversity.

Soil organisms, including earthworms, are a key component of terrestrial ecosystems. However, little is known about their diversity, their distribution, and the threats affecting them. We compiled a global dataset of sampled earthworm communities from 6928 sites in 57 countries as a basis for predicting patterns in earthworm diversity, abundance, and biomass. We found that local species richness and abundance typically peaked at higher latitudes, displaying patterns opposite to those observed in aboveground organisms. However, high species dissimilarity across tropical locations may cause diversity across the entirety of the tropics to be higher than elsewhere. Climate variables were found to be more important in shaping earthworm communities than soil properties or habitat cover. These findings suggest that climate change may have serious implications for earthworm communities and for the functions they provide.

The spread of Kalmia angustifolia on black spruce forest cutovers contributes to the spatial heterogeneity of soil resources.

Kalmia angustifolia is a boreal ericaceous shrub that can rapidly spread on black spruce forest cutovers in eastern Canada, where CPRS (i.e. Cutting with Protection of Regeneration and Soils") is practiced. The proliferation of Kalmia often coincides with a reduction in the growth rate of regenerating black spruce seedlings. We report on a study where we compared the local effects of Kalmia and black spruce seedling patches (i.e. two types of "Vegetation") on chemical and biochemical soil properties in CPRS cutovers within mesic spruce-moss and xeric spruce-lichen ecosystems, as well as in four mature spruce-moss forests (i.e. three "Site Types"). Results from 13C-CPMAS-NMR revealed lower O-alkyl C (i.e. carbohydrates), higher aromatic C (i.e. lignin and other phenolics) and higher carbonyl-C (i.e. amide-C and carboxyl groups) in spruce-moss than in spruce-lichen forest floors (F-horizon). In spite of these distinctions, we observed only a small number of Site Type x Vegetation interactions controlling soil properties. Vegetation had a significant effect on ten forest floor properties. Most notably, Kalmia patches had higher concentrations of condensed tannins and lower mineral N cycling. On the other hand, Site Type had a relatively greater effect on the deeper podzolic-B horizons, where mineral N and microbial activity were higher in mature spruce-moss forests than in the cutovers. Green and senescent Kalmia leaves collected at these sites had higher N, tannin and phenolic concentrations than green and senescent spruce needles. A 25 month litter bag study found lower decomposition of Kalmia leaf litter in spruce patches on spruce-lichen cutovers compared to spruce patches on spruce-moss cutovers, or to Kalmia patches on spruce-lichen cutovers. Given that black spruce seedlings obtain most of their nutrients from the forest floor, our results suggest that CPRS may have long-term negative effects on black spruce forest productivity if the spread of Kalmia is left unchecked.

Anthropogenic deposition of heavy metals and phosphorus may reduce biological N2 fixation in boreal forest mosses.

A study was undertaken to test the effects of molybdenum (Mo) and phosphorus (P) amendments on biological nitrogen (N) fixation (BNF) by boreal forest moss-associated cyanobacteria. Feather moss (Pleurozium schreberi) samples were collected on five sites, on two dates and at different roadside distances (0-100m) corresponding to an assumed gradient of reactive N deposition. Potential BNF of Mo and P amended moss samples was measured using the acetylene reduction assay. Total N, P and heavy metal concentrations of mosses collected at 0 and 100m from roadsides were also measured. Likewise, the needles from Norway spruce trees (Picea abies) at different roadside distances were collected in late summer and analyzed for total N, P and heavy metals. There was a significant increase in BNF with roadside distance on 7-of-10 individual Site×Date combinations. We found no clear evidence of an N gradient across roadside distances. Elemental analyses of feather moss and Norway spruce needle tissues suggested decreasing deposition of heavy metals (Mo-Co-Cr-Ni-V-Pb-Ag-Cu) as well as P with increasing distance from the roadside. The effects of Mo and P amendments on BNF were infrequent and inconsistent across roadside distances and across sites. One particular site, however, displayed greater concentrations of heavy metals near the roadside, as well as a steeper P fertility gradient with roadside distance, than the other sites. Here, BNF increased with roadside distance only when moss samples were amended with P. Also at this site, BNF across all roadside distances was higher when mosses were amended with both Mo and P, suggesting a co-limitation of these two nutrients in controlling BNF. In summary, our study showed a potential for car emissions to increase heavy metals and P along roadsides and underscored the putative roles of these anthropogenic pollutants on BNF in northern latitudes.

Effects of preconditioning the rhizosphere of different plant species on biotic methane oxidation kinetics.

The rhizosphere is known as the most active biogeochemical layer of the soil. Therefore, it could be a beneficial environment for biotic methane oxidation. The aim of this study was to document - by means of batch incubation tests - the kinetics of CH4 oxidation in rhizosphere soils that were previously exposed to methane. Soils from three pre-exposure to CH4 zones were sampled: the never-before pre-exposed (NEX), the moderately pre-exposed (MEX) and the very pre-exposed (VEX). For each pre-exposure zone, the rhizosphere of several plant species was collected, pre-incubated, placed in glass vials and submitted to CH4 concentrations varying from 0.5% to 10%. The time to the beginning of CH4 consumption and the CH4 oxidation rate were recorded. The results showed that the fastest CH4 consumption occurred for the very pre-exposed rhizosphere. Specifically, a statistically significant difference in CH4 oxidation half-life was found between the rhizosphere of the VEX vegetated with a mixture of different plants and the NEX vegetated with ryegrass. This difference was attributed to the combined effect of the preconditioning level and plant species as well as to the organic matter content. Regardless of the preconditioning level, the oxidation rate values obtained in this study were comparable to those reported in the reviewed literature for mature compost.

Does vegetation affect the methane oxidation efficiency of passive biosystems?

It is often reported in the technical literature that the presence of vegetation improves the methane oxidation efficiency of biosystems; however, the phenomena involved and biosystem performance results are still poorly documented, particularly in the field. This triggered a study to assess the importance of vegetation in methane oxidation efficiency (MOE). In this study, 4 large scale columns, each filled with sand, topsoil and a mixture of compost and topsoil were tested under controlled conditions in the laboratory and partially controlled conditions in the field. Four series of laboratory tests and two series of field tests were performed. 4 different plant covers were tested for each series: Trifolium repens L. (White clover), Phleum pratense L. (Timothy grass), a mixture of both, and bare soil as the control biosystem. The study results indicated that up to a loading equal to 100 g CH4/m(2)/d, the type of plant cover did not influence the oxidation rates, and the MOE was quite high (⩾ 95%) in all columns. Beyond this point, the oxidation rate continued to increase, reaching 253 and 179 g CH4/m(2)/d in laboratory and field tests respectively. In the end, the bare soil achieved as high or higher MOEs than vegetated biosystems. Despite the fact that the findings of this study cannot be generalized to other types of biosystems and plants and that the vegetation types tested were not fully grown, it was shown that for the short-term tests performed and the types of substrates and plants used herein, vegetation does not seem to be a key factor for enhancing biosystem performance. This key conclusion does not corroborate the conclusion of the relatively few studies published in the technical literature assessing the importance of vegetation in MOE.

A trait-based framework to understand life history of mycorrhizal fungi.

Despite the growing appreciation for the functional diversity of arbuscular mycorrhizal (AM) fungi, our understanding of the causes and consequences of this diversity is still poor. In this opinion article, we review published data on AM fungal functional traits and attempt to identify major axes of life history variation. We propose that a life history classification system based on the grouping of functional traits, such as Grime's C-S-R (competitor, stress tolerator, ruderal) framework, can help to explain life history diversification in AM fungi, successional dynamics, and the spatial structure of AM fungal assemblages. Using a common life history classification framework for both plants and AM fungi could also help in predicting probable species associations in natural communities and increase our fundamental understanding of the interaction between land plants and AM fungi.

Forest floor bacterial community composition and catabolic profiles in relation to landscape features in Québec's southern boreal forest.

Bacterial communities mediate many of the processes in boreal forest floors that determine the functioning of these ecosystems, yet it remains uncertain whether the composition of these communities is distributed nonrandomly across the landscape. In a study performed in the southern boreal mixed wood forest of Québec, Canada, we tested the hypothesis that stand type (spruce/fir, aspen, paper birch), stand age (57, 78-85, and 131 years old), and geologic parent material (clay and till) were correlated with forest floor bacterial community composition. Forest floors in 54 independent forest stands were sampled to comprise a full factorial array of the three predictor variables. Bacterial community structure was examined by terminal restriction fragment (T-RF) length polymorphism analysis of genes encoding for 16S rRNA. Distance-based redundancy analysis of T-RF assemblages revealed that each predictor variable, as well as their interaction terms, had a significant effect on bacterial community composition, geologic parent material being the most discriminating factor. A survey of the 15 T-RFs with the highest percentage fit on the first two ordination axes describing the main effects indicated that each landscape feature correlated to a distinct group of bacteria. A survey of the most discriminant T-RFs describing the effect of stand type within each combination of stand age and geologic parent material indicated a strong dependency of several T-RFs on geologic parent material. Given the possible link between bacterial community composition and forest floor functioning, we also assessed the effects of the same three landscape features on community-level catabolic profiles (CLCP) of the extractable forest floor microbiota. Geologic parent material and stand type had significant effects on CLCPs. On clay plots, the effects of landscape features on T-RF patterns were highly consistent with their effects on CLCPs. In light of our results, we suggest that future research examine whether bacterial community composition or CLCPs can be used to detect latent environmental changes across landscape units.