Detalhe da pesquisa
1.
Size-exclusion chromatography combined with DIA-MS enables deep proteome profiling of extracellular vesicles from melanoma plasma and serum.
Cell Mol Life Sci;
81(1): 90, 2024 Feb 14.
Artigo
em Inglês
| MEDLINE
| ID: mdl-38353833
2.
Optimizing Spectronaut Search Parameters to Improve Data Quality with Minimal Proteome Coverage Reductions in DIA Analyses of Heterogeneous Samples.
J Proteome Res;
23(6): 1926-1936, 2024 Jun 07.
Artigo
em Inglês
| MEDLINE
| ID: mdl-38691771
3.
MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets.
Mol Cell Proteomics;
21(1): 100178, 2022 01.
Artigo
em Inglês
| MEDLINE
| ID: mdl-34798331
4.
Biomarker Candidates for Tumors Identified from Deep-Profiled Plasma Stem Predominantly from the Low Abundant Area.
J Proteome Res;
21(7): 1718-1735, 2022 07 01.
Artigo
em Inglês
| MEDLINE
| ID: mdl-35605973
5.
Combining Precursor and Fragment Information for Improved Detection of Differential Abundance in Data Independent Acquisition.
Mol Cell Proteomics;
19(2): 421-430, 2020 02.
Artigo
em Inglês
| MEDLINE
| ID: mdl-31888964
6.
Analysis of 1508 Plasma Samples by Capillary-Flow Data-Independent Acquisition Profiles Proteomics of Weight Loss and Maintenance.
Mol Cell Proteomics;
18(6): 1242-1254, 2019 06.
Artigo
em Inglês
| MEDLINE
| ID: mdl-30948622
7.
Systematic Comparison of Strategies for the Enrichment of Lysosomes by Data Independent Acquisition.
J Proteome Res;
19(1): 371-381, 2020 01 03.
Artigo
em Inglês
| MEDLINE
| ID: mdl-31738065
8.
Comparison of Protein Quantification in a Complex Background by DIA and TMT Workflows with Fixed Instrument Time.
J Proteome Res;
18(3): 1340-1351, 2019 03 01.
Artigo
em Inglês
| MEDLINE
| ID: mdl-30726097
9.
Optimization of Experimental Parameters in Data-Independent Mass Spectrometry Significantly Increases Depth and Reproducibility of Results.
Mol Cell Proteomics;
16(12): 2296-2309, 2017 Dec.
Artigo
em Inglês
| MEDLINE
| ID: mdl-29070702
10.
WITHDRAWN: Heralds of parallel MS: Data-independent acquisition surpassing sequential identification of data dependent acquisition in proteomics.
Mol Cell Proteomics;
2017 Apr 20.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28428241
11.
New targeted approaches for the quantification of data-independent acquisition mass spectrometry.
Proteomics;
17(9)2017 May.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28319648
12.
Extending the limits of quantitative proteome profiling with data-independent acquisition and application to acetaminophen-treated three-dimensional liver microtissues.
Mol Cell Proteomics;
14(5): 1400-10, 2015 May.
Artigo
em Inglês
| MEDLINE
| ID: mdl-25724911
13.
High-precision iRT prediction in the targeted analysis of data-independent acquisition and its impact on identification and quantitation.
Proteomics;
16(15-16): 2246-56, 2016 08.
Artigo
em Inglês
| MEDLINE
| ID: mdl-27213465
14.
Ubiquitylation of the chemokine receptor CCR7 enables efficient receptor recycling and cell migration.
J Cell Sci;
125(Pt 19): 4463-74, 2012 Oct 01.
Artigo
em Inglês
| MEDLINE
| ID: mdl-22797918
15.
Purification and identification of endogenous polySUMO conjugates.
EMBO Rep;
12(2): 142-8, 2011 Feb.
Artigo
em Inglês
| MEDLINE
| ID: mdl-21252943
16.
Cdc48/p97 promotes reformation of the nucleus by extracting the kinase Aurora B from chromatin.
Nature;
450(7173): 1258-62, 2007 Dec 20.
Artigo
em Inglês
| MEDLINE
| ID: mdl-18097415
17.
Limited Proteolysis-Mass Spectrometry to Identify Metabolite-Protein Interactions.
Methods Mol Biol;
2554: 69-89, 2023.
Artigo
em Inglês
| MEDLINE
| ID: mdl-36178621
18.
Different syngeneic tumors show distinctive intrinsic tumor-immunity and mechanisms of actions (MOA) of anti-PD-1 treatment.
Sci Rep;
12(1): 3278, 2022 02 28.
Artigo
em Inglês
| MEDLINE
| ID: mdl-35228603
19.
DIA label-free proteomic analysis of murine bone-marrow-derived macrophages.
STAR Protoc;
3(4): 101725, 2022 12 16.
Artigo
em Inglês
| MEDLINE
| ID: mdl-36166358
20.
Global, in situ analysis of the structural proteome in individuals with Parkinson's disease to identify a new class of biomarker.
Nat Struct Mol Biol;
29(10): 978-989, 2022 10.
Artigo
em Inglês
| MEDLINE
| ID: mdl-36224378