Detalhe da pesquisa
1.
Artificial intelligence to guide precision anticancer therapy with multitargeted kinase inhibitors.
BMC Cancer;
22(1): 1211, 2022 Nov 24.
Artigo
em Inglês
| MEDLINE
| ID: mdl-36434556
2.
Binding site matching in rational drug design: algorithms and applications.
Brief Bioinform;
20(6): 2167-2184, 2019 11 27.
Artigo
em Inglês
| MEDLINE
| ID: mdl-30169563
3.
BionoiNet: ligand-binding site classification with off-the-shelf deep neural network.
Bioinformatics;
36(10): 3077-3083, 2020 05 01.
Artigo
em Inglês
| MEDLINE
| ID: mdl-32053156
4.
DeepDrug3D: Classification of ligand-binding pockets in proteins with a convolutional neural network.
PLoS Comput Biol;
15(2): e1006718, 2019 02.
Artigo
em Inglês
| MEDLINE
| ID: mdl-30716081
5.
Elucidating the druggability of the human proteome with eFindSite.
J Comput Aided Mol Des;
33(5): 509-519, 2019 05.
Artigo
em Inglês
| MEDLINE
| ID: mdl-30888556
6.
Comparative assessment of strategies to identify similar ligand-binding pockets in proteins.
BMC Bioinformatics;
19(1): 91, 2018 03 09.
Artigo
em Inglês
| MEDLINE
| ID: mdl-29523085
7.
Cysteines and N-Glycosylation Sites Conserved among All Alphaherpesviruses Regulate Membrane Fusion in Herpes Simplex Virus 1 Infection.
J Virol;
91(21)2017 11 01.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28835497
8.
Across-proteome modeling of dimer structures for the bottom-up assembly of protein-protein interaction networks.
BMC Bioinformatics;
18(1): 257, 2017 May 12.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28499419
9.
Herpes Simplex Virus 1 UL37 Protein Tyrosine Residues Conserved among All Alphaherpesviruses Are Required for Interactions with Glycoprotein K, Cytoplasmic Virion Envelopment, and Infectious Virus Production.
J Virol;
90(22): 10351-10361, 2016 Nov 15.
Artigo
em Inglês
| MEDLINE
| ID: mdl-27630233
10.
Predicting protein interface residues using easily accessible on-line resources.
Brief Bioinform;
16(6): 1025-34, 2015 Nov.
Artigo
em Inglês
| MEDLINE
| ID: mdl-25797794
11.
PDID: database of molecular-level putative protein-drug interactions in the structural human proteome.
Bioinformatics;
32(4): 579-86, 2016 Feb 15.
Artigo
em Inglês
| MEDLINE
| ID: mdl-26504143
12.
Break Down in Order To Build Up: Decomposing Small Molecules for Fragment-Based Drug Design with eMolFrag.
J Chem Inf Model;
57(4): 627-631, 2017 04 24.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28346786
13.
Template-based identification of protein-protein interfaces using eFindSitePPI.
Methods;
93: 64-71, 2016 Jan 15.
Artigo
em Inglês
| MEDLINE
| ID: mdl-26235816
14.
Use of protein cross-linking and radiolytic footprinting to elucidate PsbP and PsbQ interactions within higher plant Photosystem II.
Proc Natl Acad Sci U S A;
111(45): 16178-83, 2014 Nov 11.
Artigo
em Inglês
| MEDLINE
| ID: mdl-25349426
15.
Use of Protein Cross-Linking and Radiolytic Labeling To Elucidate the Structure of PsbO within Higher-Plant Photosystem II.
Biochemistry;
55(23): 3204-13, 2016 06 14.
Artigo
em Inglês
| MEDLINE
| ID: mdl-27203407
16.
Deletion of a Predicted ß-Sheet Domain within the Amino Terminus of Herpes Simplex Virus Glycoprotein K Conserved among Alphaherpesviruses Prevents Virus Entry into Neuronal Axons.
J Virol;
90(5): 2230-9, 2015 Dec 09.
Artigo
em Inglês
| MEDLINE
| ID: mdl-26656706
17.
GeauxDock: A novel approach for mixed-resolution ligand docking using a descriptor-based force field.
J Comput Chem;
36(27): 2013-26, 2015 Oct 15.
Artigo
em Inglês
| MEDLINE
| ID: mdl-26250822
18.
Prediction of protein-protein interaction sites from weakly homologous template structures using meta-threading and machine learning.
J Mol Recognit;
28(1): 35-48, 2015 Jan.
Artigo
em Inglês
| MEDLINE
| ID: mdl-26268369
19.
Predicted binding site information improves model ranking in protein docking using experimental and computer-generated target structures.
BMC Struct Biol;
15: 23, 2015 Nov 23.
Artigo
em Inglês
| MEDLINE
| ID: mdl-26597230
20.
eMatchSite: sequence order-independent structure alignments of ligand binding pockets in protein models.
PLoS Comput Biol;
10(9): e1003829, 2014 Sep.
Artigo
em Inglês
| MEDLINE
| ID: mdl-25232727