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1.
Biochim Biophys Acta ; 1840(1): 113-9, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-24016601

RESUMO

BACKGROUND: Native starch accumulates as granules containing two glucose polymers: amylose and amylopectin. Phosphate (0.2-0.5%) and proteins (0.1-0.7%) are also present in some starches. Phosphate groups play a major role in starch metabolism while granule-bound starch synthase 1 (GBSS1) which represents up to 95% of the proteins bound to the granule is responsible for amylose biosynthesis. METHODS: Synchrotron micro-X-ray fluorescence (µXRF) was used for the first time for high-resolution mapping of GBSS1 and phosphate groups based on the XRF signal of sulfur (S) and phosphorus (P), respectively. Wild-type starches were studied as well as their related mutants lacking GBSS1 or starch-phosphorylating enzyme. RESULTS: Wild-type potato and maize starch exhibited high level of phosphorylation and high content of sulfur respectively when compared to mutant potato starch lacking glucan water dikinase (GWD) and mutant maize starch lacking GBSS1. Phosphate groups are mostly present at the periphery of wild-type potato starch granules, and spread all over the granule in the amylose-free mutant. P and S XRF were also measured within single small starch granules from Arabidopsis or Chlamydomonas not exceeding 3-5µm in diameter. CONCLUSIONS: Imaging GBSS1 (by S mapping) in potato starch sections showed that the antisense technique suppresses the expression of GBSS1 during biosynthesis. P mapping confirmed that amylose is mostly present in the center of the granule, which had been suggested before. GENERAL SIGNIFICANCE: µXRF is a potentially powerful technique to analyze the minor constituents of starch and understand starch structure/properties or biosynthesis by the use of selected genetic backgrounds.


Assuntos
Grânulos Citoplasmáticos/metabolismo , Fósforo/metabolismo , Solanum tuberosum/metabolismo , Espectrometria por Raios X/métodos , Sintase do Amido/metabolismo , Amido/metabolismo , Enxofre/metabolismo , Síncrotrons , Triticum/metabolismo , Solanum tuberosum/crescimento & desenvolvimento , Espectrometria por Raios X/instrumentação , Triticum/crescimento & desenvolvimento
2.
Biochim Biophys Acta ; 1830(1): 2167-77, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23041072

RESUMO

BACKGROUND: Glycogen and starch branching enzymes catalyze the formation of α(1→6) linkages in storage polysaccharides by rearrangement of preexisting α-glucans. This reaction occurs through the cleavage of α(1→4) linkage and transfer in α(1→6) of the fragment in non-reducing position. These enzymes define major elements that control the structure of both glycogen and starch. METHODS: The kinetic parameters of the branching enzyme of Rhodothermus obamensis (RoBE) were established after in vitro incubation with different branched or unbranched α-glucans of controlled structure. RESULTS: A minimal chain length of ten glucosyl units was required for the donor substrate to be recognized by RoBE that essentially produces branches of DP 3-8. We show that RoBE preferentially creates new branches by intermolecular mechanism. Branched glucans define better substrates for the enzyme leading to the formation of hyper-branched particles of 30-70nm in diameter (dextrins). Interestingly, RoBE catalyzes an additional α-4-glucanotransferase activity not described so far for a member of the GH13 family. CONCLUSIONS: RoBE is able to transfer α(1→4)-linked-glucan in C4 position (instead of C6 position for the branching activity) of a glucan to create new α(1→4) linkages yielding to the elongation of linear chains subsequently used for further branching. This result is a novel case for the thin border that exists between enzymes of the GH13 family. GENERAL SIGNIFICANCE: This work reveals the original catalytic properties of the thermostable branching enzyme of R. obamensis. It defines new approach to produce highly branched α-glucan particles in vitro.


Assuntos
Enzima Ramificadora de 1,4-alfa-Glucana/química , Enzima Ramificadora de 1,4-alfa-Glucana/isolamento & purificação , Proteínas de Bactérias/química , Proteínas de Bactérias/isolamento & purificação , Rhodothermus/enzimologia , Enzima Ramificadora de 1,4-alfa-Glucana/metabolismo , Proteínas de Bactérias/metabolismo , Catálise , Estabilidade Enzimática , Especificidade por Substrato/fisiologia
3.
J Exp Bot ; 65(18): 5179-92, 2014 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-25056772

RESUMO

Brachypodium distachyon is a non-domesticated cereal. Nonetheless, Brachypodium was recently introduced as a model plant for temperate cereals. This study compares grain starch metabolism in Brachypodium and barley (Hordeum vulgare). In Brachypodium, we identified and annotated 28 genes involved in starch metabolism and identified important motifs including transit peptides and putative carbohydrate-binding modules (CBMs) of the families CBM20, CBM45, CBM48, and CBM53. Starch content was markedly lower in Brachypodium grains (12%) compared to barley grains (47%). Brachypodium starch granules were doughnut shaped and bimodally distributed into distinct small B-type (2.5-10 µm) and very small C-type (0.5-2.5 µm) granules. Large A-type granules, typical of cereals, were absent. Starch-bound phosphate, important for starch degradation, was 2-fold lower in Brachypodium compared with barley indicating different requirements for starch mobilization. The amylopectin branch profiles were similar and the amylose content was only slightly higher compared with barley cv. Golden Promise. The crystallinity of Brachypodium starch granules was low (10%) compared to barley (20%) as determined by wide-angle X-ray scattering (WAXS) and molecular disorder was confirmed by differential scanning calorimetry (DSC). The expression profiles in grain for most genes were distinctly different for Brachypodium compared to barley, typically showing earlier decline during the course of development, which can explain the low starch content and differences in starch molecular structure and granule characteristics. High transitory starch levels were observed in leaves of Brachypodium (2.8% after 14h of light) compared to barley (1.9% after 14h of light). The data suggest important pre-domesticated features of cereals.


Assuntos
Brachypodium/metabolismo , Amido/metabolismo , Varredura Diferencial de Calorimetria , Hordeum/metabolismo , Proteínas de Plantas/metabolismo
4.
Biopolymers ; 101(3): 257-71, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-23828181

RESUMO

Morphology, molecular structure, and thermal properties of potato starch granules with low to high phosphate content were studied as an effect of mild acid hydrolysis (lintnerization) to 80% solubilization at two temperatures (25 and 45°C). Light microscopy showed that the lintners contained apparently intact granules, which disintegrated into fragments upon dehydration. Transmission electron microscopy of rehydrated lintners revealed lacy networks of smaller subunits. The molecular composition of the lintners suggested that they largely consisted of remnants of crystalline lamellae. When lintnerization was performed at 45°C, the lintners contained more of branched dextrins compared to 25°C in both low and intermediate phosphate-containing samples. High-phosphate-containing starch was, however, unaffected by temperature and this was probably due to an altered amylopectin structure rather than the phosphate content. After lintnerization, the melting endotherms were broad with decreased onset and increased peak melting temperatures. The relative crystallinity was lower in lintners prepared at 45°C. A hypothesis that combines the kinetics of lintnerization with the molecular and thermal characteristics of the lintners is presented.


Assuntos
Amilopectina , Solanum tuberosum , Amilose/química , Hidrólise , Estrutura Molecular , Fosforilação , Amido
5.
Anal Bioanal Chem ; 406(6): 1607-18, 2014 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-24220756

RESUMO

Asymmetrical flow field flow fractionation (AF4) has proven to be a very powerful and quantitative method for the determination of the macromolecular structure of high molar mass branched biopolymers, when coupled with multi-angle laser light scattering (MALLS). This work describes a detailed investigation of the macromolecular structure of native glycogens and hyperbranched α-glucans (HBPs), with average molar mass ranging from 2 × 10(6) to 4.3 × 10(7) g mol(-1), which are not well fractionated by means of classical size-exclusion chromatography. HBPs were enzymatically produced from sucrose by the tandem action of an amylosucrase and a branching enzyme mimicking in vitro the elongation and branching steps involved in glycogen biosynthesis. Size and molar mass distributions were studied by AF4, coupled with online quasi-elastic light scattering (QELS) and transmission electron microscopy. AF4-MALLS-QELS has shown a remarkable agreement between hydrodynamic radii obtained by online QELS and by AF4 theory in normal mode with constant cross flow. Molar mass, size, and dispersity were shown to significantly increase with initial sucrose concentration, and to decrease when the branching enzyme activity increases. Several populations with different size range were observed: the amount of small size molecules decreasing with increasing sucrose concentration. The spherical and dense global conformation thus highlighted was partly similar to native glycogens. A more detailed study of HBPs synthesized from low and high initial sucrose concentrations was performed using complementary enzymatic hydrolysis of external chains and chromatography. It emphasized a more homogeneous branching pattern than native glycogens with a denser core and shorter external chains.


Assuntos
Fracionamento por Campo e Fluxo , Glucanos/química , Glicogênio/química , Amilases/metabolismo , Bactérias/enzimologia , Fracionamento por Campo e Fluxo/métodos , Glucanos/isolamento & purificação , Glucanos/metabolismo , Glucosiltransferases/metabolismo , Glicogênio/isolamento & purificação , Glicogênio/metabolismo , Luz , Estrutura Molecular , Peso Molecular , Espalhamento de Radiação , Sacarose/metabolismo
6.
Biomacromolecules ; 14(2): 438-47, 2013 Feb 11.
Artigo em Inglês | MEDLINE | ID: mdl-23311582

RESUMO

Glycogen biosynthesis requires the coordinated action of elongating and branching enzymes, of which the synergetic action is still not clearly understood. We have designed an experimental plan to develop and fully exploit a biomimetic system reproducing in vitro the activities involved in the formation of α(1,4) and α(1,6) glycosidic linkages during glycogen biosynthesis. This method is based on the use of two bacterial transglucosidases, the amylosucrase from Neisseria polysaccharea and the branching enzyme from Rhodothermus obamensis . The α-glucans synthesized from sucrose, a low cost agroresource, by the tandem action of the two enzymes, have been characterized by using complementary enzymatic, chromatographic, and imaging techniques. In a single step, linear and branched α-glucans were obtained, whose proportions, morphology, molar mass, and branching degree depended on both the initial sucrose concentration and the ratio between elongating and branching enzymes. In particular, spherical hyperbranched α-glucans with a controlled mean diameter (ranging from 10 to 150 nm), branching degree (from 10 to 13%), and weight-average molar mass (3.7 × 10(6) to 4.4 × 10(7) g.mol(-1)) were synthesized. Despite their structure, which is similar to that of natural glycogens, the mechanisms involved in their in vitro synthesis appeared to be different from those involved in the biosynthesis of native hyperbranched α-glucans.


Assuntos
Enzima Ramificadora de 1,4-alfa-Glucana/metabolismo , Glucanos/síntese química , Glucosiltransferases/metabolismo , Neisseria/enzimologia , Rhodothermus/enzimologia , Enzima Ramificadora de 1,4-alfa-Glucana/genética , Biomimética , Glucanos/química , Glucanos/ultraestrutura , Glucosiltransferases/genética , Glutationa Transferase/genética , Glutationa Transferase/metabolismo , Amido/metabolismo
7.
BMC Plant Biol ; 12: 223, 2012 Nov 21.
Artigo em Inglês | MEDLINE | ID: mdl-23171412

RESUMO

BACKGROUND: Starch is stored in higher plants as granules composed of semi-crystalline amylopectin and amorphous amylose. Starch granules provide energy for the plant during dark periods and for germination of seeds and tubers. Dietary starch is also a highly glycemic carbohydrate being degraded to glucose and rapidly absorbed in the small intestine. But a portion of dietary starch, termed "resistant starch" (RS) escapes digestion and reaches the large intestine, where it is fermented by colonic bacteria producing short chain fatty acids (SCFA) which are linked to several health benefits. The RS is preferentially derived from amylose, which can be increased by suppressing amylopectin synthesis by silencing of starch branching enzymes (SBEs). However all the previous works attempting the production of high RS crops resulted in only partly increased amylose-content and/or significant yield loss. RESULTS: In this study we invented a new method for silencing of multiple genes. Using a chimeric RNAi hairpin we simultaneously suppressed all genes coding for starch branching enzymes (SBE I, SBE IIa, SBE IIb) in barley (Hordeum vulgare L.), resulting in production of amylose-only starch granules in the endosperm. This trait was segregating 3:1. Amylose-only starch granules were irregularly shaped and showed peculiar thermal properties and crystallinity. Transgenic lines retained high-yield possibly due to a pleiotropic upregualtion of other starch biosynthetic genes compensating the SBEs loss. For gelatinized starch, a very high content of RS (65 %) was observed, which is 2.2-fold higher than control (29%). The amylose-only grains germinated with same frequency as control grains. However, initial growth was delayed in young plants. CONCLUSIONS: This is the first time that pure amylose has been generated with high yield in a living organism. This was achieved by a new method of simultaneous suppression of the entire complement of genes encoding starch branching enzymes. We demonstrate that amylopectin is not essential for starch granule crystallinity and integrity. However the slower initial growth of shoots from amylose-only grains may be due to an important physiological role played by amylopectin ordered crystallinity for rapid starch remobilization explaining the broad conservation in the plant kingdom of the amylopectin structure.


Assuntos
Enzima Ramificadora de 1,4-alfa-Glucana/genética , Amilose/biossíntese , Genes de Plantas/genética , Hordeum/enzimologia , Hordeum/genética , Supressão Genética , Varredura Diferencial de Calorimetria , Segregação de Cromossomos/genética , Expressão Gênica , Regulação da Expressão Gênica de Plantas , Inativação Gênica , Pleiotropia Genética , Germinação , Hordeum/anatomia & histologia , Hordeum/crescimento & desenvolvimento , Microscopia de Polarização , Peso Molecular , Fenótipo , Plantas Geneticamente Modificadas , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Sementes/anatomia & histologia , Sementes/ultraestrutura , Solubilidade , Temperatura , Transformação Genética , Transgenes/genética , Difração de Raios X , beta-Glucanas/metabolismo
8.
Biomacromolecules ; 13(1): 187-95, 2012 Jan 09.
Artigo em Inglês | MEDLINE | ID: mdl-22098057

RESUMO

Seven dextran types, displaying from 3 to 20% α(1→3) glycosidic linkages, were synthesized in vitro from sucrose by mutants of dextransucrase DSR-S from Leuconostoc mesenteroides NRRL B-512F, obtained by combinatorial engineering. The structural and physicochemical properties of these original biopolymers were characterized. When asymmetrical flow field flow fractionation coupled with multiangle laser light scattering was used, it was determined that weight average molar masses and radii of gyration ranged from 0.76 to 6.02 × 10(8) g·mol(-1) and from 55 to 206 nm, respectively. The ν(G) values reveal that dextrans Gcn6 and Gcn7, which contain 15 and 20% α(1→3) linkages, are highly branched and contain long ramifications, while Gcn1 is rather linear with only 3% α(1→3) linkages. Others display intermediate molecular structures. Rheological investigation shows that all of these polymers present a classical non-Newtonian pseudoplastic behavior. However, Gcn_DvΔ4N, Gcn2, Gcn3, and Gcn7 form weak gels, while others display a viscoelastic behavior that is typical of entangled polymer solutions. Finally, glass transition temperature T(g) was measured by differential scanning calorimetry. Interestingly, the T(g) of Gcn1 and Gcn5 are equal to 19.0 and 29.8 °C, respectively. Because of this low T(g), these two original dextrans are able to form rubber and flexible films at ambient temperature without any plasticizer addition. The mechanical parameters determined for Gcn1 films from tensile tests are very promising in comparison to the films obtained with other polysaccharides extracted from plants, algae or microbial fermentation. These results lead the way to using these dextrans as innovative biosourced materials.


Assuntos
Proteínas de Bactérias/química , Dextranos/biossíntese , Dextranos/química , Glucosiltransferases/química , Leuconostoc/enzimologia , Mutação , Proteínas de Bactérias/genética , Configuração de Carboidratos , Glucosiltransferases/genética , Leuconostoc/genética , Engenharia de Proteínas/métodos , Viscosidade
9.
Anal Chem ; 83(3): 989-93, 2011 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-21182244

RESUMO

Synchrotron UV fluorescence microscopy was used for the first time to visualize the adsorption and diffusion of an enzyme while degrading a solid substrate. The degradation pathway of single starch granules by two amylases, optimized for biofuel production and industrial starch hydrolysis, was followed by tryptophan fluorescence (excitation at 280 nm, emission filter at 300-400 nm) and visible light imaging. Thus, both the adsorption of enzyme onto starch granules at 283 nm resolution and the resulting morphological changes were recorded at different stages of hydrolysis. It is the first time that amylases were localized on starch without staining or adding a fluorescent probe at such high resolution. This technique presents a very high potential for imaging proteins in complex systems. Its sensitivity was demonstrated by the detection of GBSS (the granular bound starch synthase) at high recording times, GBSS being present at very low levels in maize starch granules.


Assuntos
Amilases/metabolismo , Microscopia de Fluorescência/métodos , Amido/análise , Zea mays/química , Difusão , Microscopia de Fluorescência/instrumentação , Amido/metabolismo , Síncrotrons/instrumentação , Raios Ultravioleta
10.
Biomacromolecules ; 12(1): 34-42, 2011 Jan 10.
Artigo em Inglês | MEDLINE | ID: mdl-21158480

RESUMO

A new α-amylase from Rhizomucor sp. (RA) was studied in detail due to its very efficient hydrolysis of raw starch granules at low temperature (32 °C). RA contains a starch binding domain (SBD) connected to the core amylase catalytic domain by a O-glycosylated linker. The mode of degradation of native maize starch granules and, in particular, the changes in the starch structure during the hydrolysis, was monitored for hydrolysis of raw starch at concentrations varying between 0.1 and 31%. RA was compared to porcine pancreatic α-amylase (PPA), which has been widely studied either on resistant starch or as a model enzyme in solid starch hydrolysis studies. RA is particularly efficient on native maize starch and release glucose only. The hydrolysis rate reaches 75% for a 31% starch solution and is complete at 0.1% starch concentration. The final hydrolysis rate was dependent on both starch concentration and enzyme amount applied. RA is also very efficient in hydrolyzing the crystalline domains in the maize starch granule. The major A-type crystalline structure is more rapidly degraded than amorphous domains in the first stages of hydrolysis. This is in agreement with the observed preferential hydrolysis of amylopectin, the starch constituent that forms the backbone of the crystalline part of the granule. Amylose-lipid complexes present in most cereal starches are degraded in a second stage, yielding amylose fragments that then reassociate into B-type crystalline structures, forming the final resistant fraction.


Assuntos
Proteínas Fúngicas/química , Rhizomucor/enzimologia , Amido/química , alfa-Amilases/química , Amilopectina/química , Amilose/química , Animais , Hidrólise , Estrutura Terciária de Proteína , Suínos , Zea mays/química
11.
Biomacromolecules ; 11(11): 3049-58, 2010 Nov 08.
Artigo em Inglês | MEDLINE | ID: mdl-20873857

RESUMO

Model A-type amylose single crystals were prepared by recrystallizing dextrins from acid-hydrolyzed native starch and narrow fractions of short chains of enzymatically synthesized amylose, in dilute water/acetone solutions. In most cases, spindle-shaped crystals with a sharp, round or flat apical end were formed, organized in rosettes or fan-like assemblies. The morphology and crystal size were shown to strongly depend on the average degree of polymerization (DP), distribution width (DW), and degree of branching of the chains. The largest and most clearly faceted single crystals were prepared using fractions of synthetic amylose. Typically, 5-10 µm long crystals were obtained from fractions with 17 ≤ DP ≤ 20 and DW ≤ 8. Chains with DP > 40 and a high polydispersity formed ill-defined networks of smaller crystallites. Fractions of branched and more polydisperse limit dextrins yielded crystals smaller than those obtained from narrow fractions of synthetic amylose. The morphological analysis of faceted single crystals combined with electron diffraction data confirmed that the double helices were oriented along the long dimension of the crystal and packed into lamellae with a parallelogram cross section defined by the a and b directions of the monoclinic unit cell of A-amylose. The lamellae are stacked along the c-axis that is oriented parallel but opposite to the growth direction of the crystal.


Assuntos
Amilose/química , Tamanho da Partícula , Difração de Pó , Soluções , Propriedades de Superfície
12.
Biomacromolecules ; 11(6): 1417-28, 2010 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-20433133

RESUMO

We report a study of xyloglucan (XG)-cellulose interactions made possible by the preparation of various well-defined cellulosic and xyloglucosidic substrates. Bacterial microcrystalline cellulose (BMCC) as well as cellulose whiskers (CellWhisk) were used as cellulosic substrates. Xyloglucosidic substrates were obtained from Rubus cells and Tamarindus indica seeds. Different primary structure characteristics of XGs such as the backbone length and the nature of the side chains, as well as their repartition, were considered in order to examine the influence of the primary structure on their interaction capacity. Two complementary approaches were carried out: first, the determination of adsorption isotherms and its associated models, and second, an enthalpic study using isothermal titration calorimetry (ITC). This study highlighted that an increase of XG interaction capacity occurred with increasing XG molecular weight. Furthermore, we determined that a minimum of 12 glucosyl residues on the backbone is required to observe significant interactions. Moreover, both the presence of trisaccharidic side chains with fucosyl residues and an increase of unsubstituted glucosyl residues enhanced XG-cellulose interactions. The evolution of adsorption isotherms with temperature and ITC measurements showed that two different processes were occurring, one exothermic and one endothermic, respectively. Although the presence of an exothermic interaction mechanism has long been established, the presence of an endothermic interaction mechanism has never been reported.


Assuntos
Celulose/química , Glucanos/química , Xilanos/química , Configuração de Carboidratos , Parede Celular/química , Celulose/isolamento & purificação , Glucanos/isolamento & purificação , Gluconacetobacter xylinus/química , Modelos Moleculares , Rosaceae/química , Sementes/química , Tamarindus/química , Termodinâmica , Xilanos/isolamento & purificação
13.
Mol Biol Evol ; 25(3): 536-48, 2008 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-18093994

RESUMO

Eukaryotic cells are composed of a variety of membrane-bound organelles that are thought to derive from symbiotic associations involving bacteria, archaea, or other eukaryotes. In addition to acquiring the plastid, all Archaeplastida and some of their endosymbiotic derivatives can be distinguished from other organisms by the fact that they accumulate starch, a semicrystalline-storage polysaccharide distantly related to glycogen and never found elsewhere. We now provide the first evidence for the existence of starch in a particular species of single-cell diazotrophic cyanobacterium. We provide evidence for the existence in the eukaryotic host cell at the time of primary endosymbiosis of an uridine diphosphoglucose (UDP-glucose)-based pathway similar to that characterized in amoebas. Because of the monophyletic origin of plants, we can define the genetic makeup of the Archaeplastida ancestor with respect to storage polysaccharide metabolism. The most likely enzyme-partitioning scenario between the plastid's ancestor and its eukaryotic host immediately suggests the precise nature of the ancient metabolic symbiotic relationship. The latter consisted in the export of adenosine diphosphoglucose (ADP-glucose) from the cyanobiont in exchange for the import of reduced nitrogen from the host. We further speculate that the monophyletic origin of plastids may lie in an organism with close relatedness to present-day group V cyanobacteria.


Assuntos
Cianobactérias/genética , Filogenia , Plantas/metabolismo , Amido/metabolismo , Simbiose/fisiologia , Adenosina Difosfato Glucose/metabolismo , Evolução Biológica , Compartimento Celular/genética , Compartimento Celular/fisiologia , Cianobactérias/metabolismo , Glucose/metabolismo , Nitrogênio/metabolismo , Plantas/genética , Simbiose/genética , Uridina Difosfato Glucose/metabolismo
14.
Eukaryot Cell ; 7(5): 872-80, 2008 May.
Artigo em Inglês | MEDLINE | ID: mdl-18310353

RESUMO

The nature of the cytoplasmic pathway of starch biosynthesis was investigated in the model heterotrophic dinoflagellate Crypthecodinium cohnii. The storage polysaccharide granules were shown to be composed of both amylose and amylopectin fractions with a chain length distribution and crystalline organization very similar to those of green algae and land plant starch. Preliminary characterization of the starch pathway demonstrated that C. cohnii contains multiple forms of soluble starch synthases and one major 110-kDa granule-bound starch synthase. All purified enzymes displayed a marked substrate preference for UDP-glucose. At variance with most other microorganisms, the accumulation of starch in the dinoflagellate occurs during early and mid-log phase, with little or no synthesis witnessed when approaching stationary phase. In order to establish a genetic system allowing the study of cytoplasmic starch metabolism in eukaryotes, we describe the isolation of marker mutations and the successful selection of random recombinant populations after homothallic crosses.


Assuntos
Citoplasma/metabolismo , Dinoflagellida/genética , Dinoflagellida/metabolismo , Modelos Genéticos , Amido/metabolismo , Proteínas de Algas/análise , Proteínas de Algas/metabolismo , Animais , Cruzamentos Genéticos , Dinoflagellida/enzimologia , Dinoflagellida/crescimento & desenvolvimento , Processos Heterotróficos , Mutagênese , Proteínas de Protozoários/análise , Proteínas de Protozoários/metabolismo , Recombinação Genética , Amido/isolamento & purificação , Amido/ultraestrutura , Amido Fosforilase/análise , Amido Fosforilase/metabolismo , Sintase do Amido/análise , Sintase do Amido/metabolismo , Uridina Difosfato Glucose/metabolismo
15.
Eukaryot Cell ; 7(2): 247-57, 2008 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-18055913

RESUMO

The nature of the cytoplasmic pathway of starch biosynthesis was investigated in the model glaucophyte Cyanophora paradoxa. The storage polysaccharide granules are shown to be composed of both amylose and amylopectin fractions, with a chain length distribution and crystalline organization similar to those of green algae and land plant starch. A preliminary characterization of the starch pathway demonstrates that Cyanophora paradoxa contains several UDP-glucose-utilizing soluble starch synthase activities related to those of the Rhodophyceae. In addition, Cyanophora paradoxa synthesizes amylose with a granule-bound starch synthase displaying a preference for UDP-glucose. A debranching enzyme of isoamylase specificity and multiple starch phosphorylases also are evidenced in the model glaucophyte. The picture emerging from our biochemical and molecular characterizations consists of the presence of a UDP-glucose-based pathway similar to that recently proposed for the red algae, the cryptophytes, and the alveolates. The correlative presence of isoamylase and starch among photosynthetic eukaryotes is discussed.


Assuntos
Cyanophora/metabolismo , Citosol/metabolismo , Modelos Biológicos , Amido Fosforilase/metabolismo , Sintase do Amido/metabolismo , Amido/metabolismo , Uridina Difosfato Glucose/metabolismo , Amilopectina/metabolismo , Clonagem Molecular , Cyanophora/ultraestrutura , DNA Complementar/genética , Isoamilase/metabolismo , Filogenia , Amido/química , Amido Fosforilase/química , Sintase do Amido/química
16.
Biomacromolecules ; 8(12): 3950-8, 2007 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-18039004

RESUMO

Films of acid-hydrolyzed hydroxypropylated pea starch with average molecular weight M w ranging from 3.3 x 10 (4) g/mol to 1.6 x 10 (6) g/mol were prepared from 25% (w/w) solution by casting. The structure of the films was investigated by means X-ray diffraction and calorimetry, evidencing a B-type crystalline structure. In similar drying conditions, 25 degrees C and 40% of relative humidity, the crystallinity varied from 24% for the low molecular weight (A5) to almost none for the highest molecular weight (A160). The influence of the drying temperature was also investigated. A reduction of the crystallinity from 16% to almost none was found when increasing temperature from 25 to 65 degrees C. The glass transition temperature ( T g) at different water contents was determined. The difference of T g between the first and the second scan was interpreted by changes in the water distribution between phases into the B-type crystalline structure. Mechanical properties of the films determined by tensile tests and by DMTA in the glassy state showed no effect of the average molecular weight or of crystallinity. In contrast, thermomechanical experiments by DMTA showed that the average molecular weight of the sample influenced the mechanical relaxation and the moduli in the rubbery state.


Assuntos
Amido/análise , Amido/química , Hidrólise , Estrutura Molecular , Pisum sativum , Estresse Mecânico , Relação Estrutura-Atividade
17.
Carbohydr Polym ; 157: 380-390, 2017 Feb 10.
Artigo em Inglês | MEDLINE | ID: mdl-27987942

RESUMO

The changes in physicochemical properties of standard maize starch (SMS) by three hydrothermal treatments; DV-HMT (Direct Vapor-Heat Moisture Treatment), RP-HMT (Reduced Pressurized-Heat Moisture Treatment) and DIC (instantaneous controlled pressure drop) were investigated at different processing conditions; steam pressure (SP) varied from 1 to 3bar during 20min. Starch was steamed by direct contact, whose interest was to intensify the heat transfer phenomenon but also the water transfer. The physicochemical changes of SMS depended on process conditions and their extent followed this order: DIC>RP-HMT>DV-HMT. All treatments significantly increased gelatinization temperatures and decreased the enthalpies, confirmed by loss of granules birefringence. From 2bar, the crystalline structure changed from A-type to Vh-type, revealing formation of amylose-lipid complexes during steaming. The results clearly showed that the particle size distribution depends on the melting extent of crystalline structure during treatment. At severe processing conditions the melted fraction increased and more complex aggregates of different sizes have been formed.


Assuntos
Amido/química , Vapor , Zea mays/química , Amilose/química , Temperatura Alta , Água
18.
PLoS One ; 12(1): e0170524, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28114419

RESUMO

Lignocellulosic materials from municipal solid waste emerge as attractive resources for anaerobic digestion biorefinery. To increase the knowledge required for establishing efficient bioprocesses, dynamics of batch fermentation by the cellulolytic bacterium Ruminiclostridium cellulolyticum were compared using three cellulosic materials, paper handkerchief, cotton discs and Whatman filter paper. Fermentation of paper handkerchief occurred the fastest and resulted in a specific metabolic profile: it resulted in the lowest acetate-to-lactate and acetate-to-ethanol ratios. By shotgun proteomic analyses of paper handkerchief and Whatman paper incubations, 151 proteins with significantly different levels were detected, including 20 of the 65 cellulosomal components, 8 non-cellulosomal CAZymes and 44 distinct extracytoplasmic proteins. Consistent with the specific metabolic profile observed, many enzymes from the central carbon catabolic pathways had higher levels in paper handkerchief incubations. Among the quantified CAZymes and cellulosomal components, 10 endoglucanases mainly from the GH9 families and 7 other cellulosomal subunits had lower levels in paper handkerchief incubations. An in-depth characterization of the materials used showed that the lower levels of endoglucanases in paper handkerchief incubations could hypothetically result from its lower crystallinity index (50%) and degree of polymerization (970). By contrast, the higher hemicellulose rate in paper handkerchief (13.87%) did not result in the enhanced expression of enzyme with xylanase as primary activity, including enzymes from the "xyl-doc" cluster. It suggests the absence, in this material, of molecular structures that specifically lead to xylanase induction. The integrated approach developed in this work shows that subtle differences among cellulosic materials regarding chemical and structural characteristics have significant effects on expressed bacterial functions, in particular the cellulolysis machinery, resulting in different metabolic patterns and degradation dynamics.


Assuntos
Proteínas de Bactérias/metabolismo , Celulose/metabolismo , Clostridium/metabolismo , Proteoma , Fermentação , Frações Subcelulares/metabolismo , Espectrometria de Massas em Tandem
19.
Carbohydr Polym ; 146: 411-9, 2016 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-27112891

RESUMO

In this paper, a detailed characterization of the mechanisms at the origin of the shape-memory effect in amorphous potato starch is presented. Using different treatments (annealing) and preparation methods (hot casting and extrusion), the local structures responsible for the shape-memory were disrupted, as evidenced in the first part of the article detailing the macroscopic properties: mechanical, calorimetric and shape-memory. In the second part the macromolecular scale is investigated using X-rays diffraction and CP-MAS NMR, and thus allows making the link between the structural differences and the macroscopic properties. Finally we discuss the origin of shape-memory in amorphous starch.


Assuntos
Solanum tuberosum/química , Amido/química , Configuração de Carboidratos , Temperatura Alta , Espectroscopia de Ressonância Magnética , Difração de Raios X
20.
Carbohydr Polym ; 133: 497-506, 2015 Nov 20.
Artigo em Inglês | MEDLINE | ID: mdl-26344307

RESUMO

The many studies about amylolysis have collected considerable information regarding the contribution of the starch physico-chemical properties. But the inherent elaborate and variable structure of granular starch and, consequently, the multifactorial condition of the system hinders the interpretation of the experimental results. The immediate benefit of multivariate statistical analysis approaches with that regard is twofold: considering the factors, possibly interrelated, all together and not independently, providing a first estimation of the magnitude and confidence level of the relations between factors and amylolysis kinetic parameters. Based on data of amylolysis of 13 starch samples from wild type, single and double mutants of maize by porcine pancreatic α-amylase (PPA), a multivariate analysis is proposed. Amylolysis progress-curves were fitted by a Weibull function, as proposed in a previous work, to extract three kinetic parameters: the reaction rate coefficient during the first time-unit, k, the reaction rate retardation over time, h, and the final hydrolysis extent, X∞. Multivariate models relate the macromolecular composition and the fractions of crystalline polymorphic types to the kinetic parameters. h and X∞ are found to be highly related to the measured properties. Thus the amylose content appears to be significantly correlated to the hydrolysis rate retardation, which sheds some light on the probable contribution of the amylose molecules contained in the granules. The multivariate models give correct prediction performances except for k whose a part of variability remains unexplained. A further analysis points out the extent of the characterisation effort of the granule structure needed to extend the fraction of explained variability.


Assuntos
Modelos Estatísticos , Mutação , Amido/metabolismo , Zea mays/genética , Zea mays/metabolismo , Hidrólise , Cinética , Análise Multivariada
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