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1.
Conserv Biol ; 38(4): e14259, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-38571448

RESUMO

Approximately one quarter of the earth's population directly harvests natural resources to meet their daily needs. These individuals are disproportionately required to alter their behaviors in response to increasing climatic variability and global biodiversity loss. Much of the ever-ambitious global conservation agenda relies on the voluntary uptake of conservation behaviors in such populations. Thus, it is critical to understand how such individuals perceive environmental change and use conservation practices as a tool to protect their well-being. We developed a participatory mapping activity to elicit spatially explicit perceptions of forest change and its drivers across 43 mangrove-dependent communities in Pemba, Tanzania. We administered this activity along with a questionnaire regarding conservation preferences and behaviors to 423 individuals across those 43 communities. We analyzed these data with a set of Bayesian hierarchical statistical models. Perceived cover loss in 50% of a community's mangrove area drove individuals to decrease proposed limits on fuelwood bundles from 2.74 (forest perceived as intact) to 2.37 if participants believed resultant gains in mangrove cover would not be stolen by outsiders. Conversely, individuals who believed their community mangrove forests were at high risk of theft loosened their proposed harvest limits from 1.26 to 2.75 bundles of fuelwood in response to the same perceived forest decline. High rates of intergroup competition and mangrove loss were thus driving a self-reinforcing increase in unsustainable harvesting preferences in community forests in this system. This finding demonstrates a mechanism by which increasing environmental decline may cause communities to forgo conservation practices, rather than adopt them, as is often assumed in much community-based conservation planning. However, we also found that when effective boundaries were present, individuals were willing to limit their own harvests to stem such perceived decline.


Efectos de las percepciones del cambio forestal y la competencia intergrupal en los comportamientos de conservación comunitarios Resumen Aproximadamente una cuarta parte de la población mundial aprovecha directamente los recursos naturales para satisfacer sus necesidades diarias. Estos individuos se ven desproporcionadamente obligados a alterar sus comportamientos en respuesta a la creciente variabilidad climática y la pérdida de biodiversidad global. Gran parte de la ambiciosa agenda de conservación global se basa en la adopción voluntaria de comportamientos de conservación en dichas poblaciones. Por lo tanto, es fundamental comprender cómo esas personas perciben el cambio ambiental y utilizan las prácticas de conservación como herramienta para proteger su bienestar. Desarrollamos una actividad de mapeo participativo para generar percepciones espacialmente explícitas del cambio forestal y sus causantes en 43 comunidades dependientes de manglares en Pemba, Tanzania. Administramos esta actividad junto con un cuestionario sobre preferencias y comportamientos de conservación a 423 personas en esas 43 comunidades. Analizamos estos datos mediante un conjunto de modelos estadísticos jerárquicos bayesianos. La pérdida de cobertura percibida en el 50% del área de manglares de una comunidad llevó a los individuos a reducir los límites propuestos para los paquetes de leña de 2.74 (bosque percibido como intacto) a 2.37 si los participantes creían que las ganancias resultantes en la cobertura de manglares no serían robadas por personas ajenas a la comunidad. Por el contrario, las personas que creían que los bosques de manglares de su comunidad corrían un alto riesgo de robo flexibilizaron los límites de cosecha propuestos de 1.26 a 2.75 haces de leña en respuesta a la misma disminución percibida del bosque. Por lo tanto, las altas tasas de competencia entre grupos y pérdida de manglares estaban impulsando un aumento, que se auto reforzaba, en las preferencias de aprovechamiento insostenibles en los bosques comunitarios de este sistema. Este hallazgo muestra un mecanismo por el cual el creciente deterioro ambiental puede hacer que las comunidades renuncien a las prácticas de conservación, en lugar de adoptarlas, como a menudo se supone en gran parte de la planificación de la conservación basada en la comunidad. Sin embargo, también encontramos que cuando existían límites efectivos, los individuos estaban dispuestos a restringir sus propias cosechas para frenar esa disminución percibida.


Assuntos
Conservação dos Recursos Naturais , Florestas , Tanzânia , Humanos , Teorema de Bayes , Agricultura Florestal , Percepção
2.
Eur Radiol ; 32(10): 7237-7247, 2022 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-36006428

RESUMO

OBJECTIVES: Relapse occurs in ~20% of patients with classical Hodgkin lymphoma (cHL) despite treatment adaption based on 2-deoxy-2-[18F]fluoro-D-glucose positron emission tomography/computed tomography response. The objective was to evaluate pre-treatment FDG PET/CT-derived machine learning (ML) models for predicting outcome in patients with cHL. METHODS: All cHL patients undergoing pre-treatment PET/CT at our institution between 2008 and 2018 were retrospectively identified. A 1.5 × mean liver standardised uptake value (SUV) and a fixed 4.0 SUV threshold were used to segment PET/CT data. Feature extraction was performed using PyRadiomics with ComBat harmonisation. Training (80%) and test (20%) cohorts stratified around 2-year event-free survival (EFS), age, sex, ethnicity and disease stage were defined. Seven ML models were trained and hyperparameters tuned using stratified 5-fold cross-validation. Area under the curve (AUC) from receiver operator characteristic analysis was used to assess performance. RESULTS: A total of 289 patients (153 males), median age 36 (range 16-88 years), were included. There was no significant difference between training (n = 231) and test cohorts (n = 58) (p value > 0.05). A ridge regression model using a 1.5 × mean liver SUV segmentation had the highest performance, with mean training, validation and test AUCs of 0.82 ± 0.002, 0.79 ± 0.01 and 0.81 ± 0.12. However, there was no significant difference between a logistic model derived from metabolic tumour volume and clinical features or the highest performing radiomic model. CONCLUSIONS: Outcome prediction using pre-treatment FDG PET/CT-derived ML models is feasible in cHL patients. Further work is needed to determine optimum predictive thresholds for clinical use. KEY POINTS: • A fixed threshold segmentation method led to more robust radiomic features. • A radiomic-based model for predicting 2-year event-free survival in classical Hodgkin lymphoma patients is feasible. • A predictive model based on ridge regression was the best performing model on our dataset.


Assuntos
Doença de Hodgkin , Tomografia por Emissão de Pósitrons combinada à Tomografia Computadorizada , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Fluordesoxiglucose F18/metabolismo , Doença de Hodgkin/diagnóstico por imagem , Doença de Hodgkin/terapia , Humanos , Aprendizado de Máquina , Masculino , Pessoa de Meia-Idade , Recidiva Local de Neoplasia , Tomografia por Emissão de Pósitrons combinada à Tomografia Computadorizada/métodos , Tomografia por Emissão de Pósitrons/métodos , Estudos Retrospectivos , Adulto Jovem
3.
Conserv Biol ; 36(4): e13918, 2022 08.
Artigo em Inglês | MEDLINE | ID: mdl-35554972

RESUMO

The pink pigeon (Nesoenas mayeri) is an endemic species of Mauritius that has made a remarkable recovery after a severe population bottleneck in the 1970s to early 1990s. Prior to this bottleneck, an ex situ population was established from which captive-bred individuals were released into free-living subpopulations to increase population size and genetic variation. This conservation rescue led to rapid population recovery to 400-480 individuals, and the species was twice downlisted on the International Union for the Conservation of Nature (IUCN) Red List. We analyzed the impacts of the bottleneck and genetic rescue on neutral genetic variation during and after population recovery (1993-2008) with restriction site-associated sequencing, microsatellite analyses, and quantitative genetic analysis of studbook data of 1112 birds from zoos in Europe and the United States. We used computer simulations to study the predicted changes in genetic variation and population viability from the past into the future. Genetic variation declined rapidly, despite the population rebound, and the effective population size was approximately an order of magnitude smaller than census size. The species carried a high genetic load of circa 15 lethal equivalents for longevity. Our computer simulations predicted continued inbreeding will likely result in increased expression of deleterious mutations (i.e., a high realized load) and severe inbreeding depression. Without continued conservation actions, it is likely that the pink pigeon will go extinct in the wild within 100 years. Conservation rescue of the pink pigeon has been instrumental in the recovery of the free-living population. However, further genetic rescue with captive-bred birds from zoos is required to recover lost variation, reduce expression of harmful deleterious variation, and prevent extinction. The use of genomics and modeling data can inform IUCN assessments of the viability and extinction risk of species, and it helps in assessments of the conservation dependency of populations.


La paloma rosada (Nesoenas mayeri) es una especie endémica de Mauricio que se ha recuperado impresionantemente después de un grave cuello de botella poblacional a principios de la década de 1970 que duró hasta inicios de la década de 1990. Antes de este cuello de botella se había establecido una población ex situ de la cual se liberaban individuos reproducidos en cautiverio a las subpoblaciones en libertad para incrementar la variación genética y el tamaño poblacional. Este rescate de conservación derivó en una recuperación rápida de la población (400-480 individuos) y la especie cambió positivamente de categoría dos veces en la Lista Roja de la Unión Internacional para la Conservación de la Naturaleza (UICN). Analizamos los impactos del cuello de botella y el rescate genético sobre la variación genética neutral durante y después de la recuperación poblacional (de 1993 a 2008) mediante secuenciación RAD, análisis de microsatélites y análisis genéticos cuantitativos de los datos del libro genealógico de 1112 aves ubicadas en zoológicos de Europa y los Estados Unidos. Usamos simulaciones por computadora para estudiar los cambios pronosticados en la variación genética y en la viabilidad poblacional del pasado hacia el futuro. La variación genética declinó rápidamente, a pesar de la recuperación poblacional, y el tamaño efectivo de la población fue aproximadamente un orden de magnitud más pequeño que el tamaño del censo. La especie contó con una carga genética elevada de casi 15 equivalentes letales para la longevidad. Nuestras simulaciones pronostican que la endogamia continua probablemente resultará en un incremento en la expresión de mutaciones deletéreas (es decir, una carga realizada elevada) y en una depresión endogámica severa. Sin acciones continuas para la conservación, es probable que la paloma rosada esté extinta en vida libre dentro de cien años. El rescate de conservación de la paloma rosada ha sido fundamental en la recuperación de la población silvestre; sin embargo, se requiere de un rescate genético adicional con las aves de reproducción en cautiverio de los zoológicos para recuperar la variación perdida, reducir la expresión de la variación deletérea dañina y prevenir la extinción. El uso de la genómica y los datos modelados puede orientar las valoraciones de la UICN sobre la viabilidad y el riesgo de extinción de las especies, además de que ayuda en la evaluación de la dependencia que tienen las poblaciones de la conservación.


Assuntos
Aves , Conservação dos Recursos Naturais , Animais , Aves/genética , Espécies em Perigo de Extinção , Europa (Continente) , Variação Genética , Genômica , Densidade Demográfica
4.
Heredity (Edinb) ; 125(6): 396-416, 2020 12.
Artigo em Inglês | MEDLINE | ID: mdl-32616877

RESUMO

Crop populations derived from experimental crosses enable the genetic dissection of complex traits and support modern plant breeding. Among these, multi-parent populations now play a central role. By mixing and recombining the genomes of multiple founders, multi-parent populations combine many commonly sought beneficial properties of genetic mapping populations. For example, they have high power and resolution for mapping quantitative trait loci, high genetic diversity and minimal population structure. Many multi-parent populations have been constructed in crop species, and their inbred germplasm and associated phenotypic and genotypic data serve as enduring resources. Their utility has grown from being a tool for mapping quantitative trait loci to a means of providing germplasm for breeding programmes. Genomics approaches, including de novo genome assemblies and gene annotations for the population founders, have allowed the imputation of rich sequence information into the descendent population, expanding the breadth of research and breeding applications of multi-parent populations. Here, we report recent successes from crop multi-parent populations in crops. We also propose an ideal genotypic, phenotypic and germplasm 'package' that multi-parent populations should feature to optimise their use as powerful community resources for crop research, development and breeding.


Assuntos
Produtos Agrícolas , Genômica , Melhoramento Vegetal , Mapeamento Cromossômico , Produtos Agrícolas/genética , Genoma de Planta , Locos de Características Quantitativas
5.
Opt Express ; 27(18): 25064-25071, 2019 Sep 02.
Artigo em Inglês | MEDLINE | ID: mdl-31510385

RESUMO

This report introduces a novel time resolved Brillouin spectrometer, consisting of an opto-acoustic transducer which resides on the tip of a single-mode optical fiber of arbitrary length with 125 µm outer diameter and 5 µm sensing diameter. Demonstrated here are proof of concept spectroscopic measurements - shifts in Brillouin frequency - with sensitivities of 41±3MHz/%wt and 2.5±0.6 MHz/°C for changes in water-salinity and water-temperature, respectively, and an interpolated frequency resolution of 9±2 MHz. The technique benefits from low-cost raw materials, scalable fabrication, scalable pixel density, easy alignment, and data acquisition speeds down to 0.4 s: traits which make this compatible with in vivo applications.

6.
J Environ Manage ; 243: 88-94, 2019 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-31082755

RESUMO

In recent years, visitation to U.S. National Parks has been increasing, with the majority of this increase occurring in a subset of parks. As a result, managers in these parks must respond quickly to increasing visitor-related challenges. Improved visitation forecasting would allow managers to more proactively plan for such increases. In this study, we leverage internet search data that is freely available through Google Trends to create a forecasting model. We compare this Google Trends model to a traditional autoregressive forecasting model. Overall, our Google Trends model accurately predicted 97% of the total visitation variation to all parks one year in advance from 2013 to 2017 and outperformed the autoregressive model by all metrics. While our Google Trends model performs better overall, this was not the case for each park unit individually; the accuracy of this model varied significantly from park to park. We hypothesized that park attributes related to trip planning would correlate with the accuracy of our Google Trends model, but none of the variables tested produced overly compelling results. Future research can continue exploring the utility of Google Trends to forecast visitor use in protected areas, or use methods demonstrated in this paper to explore alternative data sources to improve visitation forecasting in U.S. National Parks.


Assuntos
Parques Recreativos , Previsões
7.
Opt Express ; 24(19): 21921-38, 2016 Sep 19.
Artigo em Inglês | MEDLINE | ID: mdl-27661927

RESUMO

Laser ultrasonics is a technique where lasers are employed to generate and detect ultrasound. A data collection method (full matrix capture) and a post processing imaging algorithm, the total focusing method, both developed for ultrasonic arrays, are modified and used in order to enhance the capabilities of laser ultrasonics for nondestructive testing by improving defect detectability and increasing spatial resolution. In this way, a laser induced ultrasonic phased array is synthesized. A model is developed and compared with experimental results from aluminum samples with side drilled holes and slots at depths of 5 - 20 mm from the surface.

8.
Appl Opt ; 54(28): 8388-98, 2015 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-26479614

RESUMO

At low frequencies ultrasound is a valuable tool to mechanically characterize and image biological tissues. There is much interest in using high-frequency ultrasound to investigate single cells. Mechanical characterization of vegetal and biological cells by measurement of Brillouin oscillations has been demonstrated using ultrasound in the GHz range. This paper presents a method to extend this technique from the previously reported single-point measurements and line scans into a high-resolution acoustic imaging tool. Our technique uses a three-layered metal-dielectric-metal film as a transducer to launch acoustic waves into the cell we want to study. The design of this transducer and measuring system is optimized to overcome the vulnerability of a cell to the exposure of laser light and heat without sacrificing the signal-to-noise ratio. The transducer substrate shields the cell from the laser radiation, efficiently generates acoustic waves, facilitates optical detection in transmission, and aids with heat dissipation away from the cell. This paper discusses the design of the transducers and instrumentation and presents Brillouin frequency images on phantom, fixed, and living cells.


Assuntos
Acústica , Técnicas Citológicas , Transdutores , Células 3T3 , Animais , Materiais Biocompatíveis , Simulação por Computador , Fibroblastos/citologia , Temperatura Alta , Lasers , Luz , Camundongos , Óptica e Fotônica , Oscilometria/métodos , Imagens de Fantasmas , Refratometria , Espalhamento de Radiação , Razão Sinal-Ruído , Estresse Mecânico , Ultrassonografia/métodos
9.
J Acoust Soc Am ; 137(1): 219-27, 2015 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-25618053

RESUMO

In order to work at higher ultrasonic frequencies, for instance, to increase the resolution, it is necessary to fabricate smaller and higher frequency transducers. This paper presents an ultrasonic transducer capable of being made at a very small size and operated at GHz frequencies. The transducers are activated and read optically using pulsed lasers and without physical contact between the instrumentation and the transducer. This removes some of the practical impediments of traditional piezoelectric architectures (such as wiring) and allows the devices to be placed immediately on or within samples, reducing the significant effect of attenuation which is very strong at frequencies above 1 GHz. The transducers presented in this paper exploit simultaneous optical and mechanical resonances to couple the optical input into ultrasonic waves and vice versa. This paper discusses the mechanical and optical design of the devices at a modest scale (a few µm) and explores the scaling of the transducers toward the sub-micron scale. Results are presented that show how the transducers response changes depending on its local environment and how the resonant frequency shifts when the transducer is loaded by a printed protein sample.


Assuntos
Nanotecnologia/instrumentação , Técnicas Fotoacústicas/instrumentação , Transdutores , Ultrassom/instrumentação , Desenho de Equipamento , Lasers , Modelos Teóricos , Soroalbumina Bovina/análise , Razão Sinal-Ruído
10.
Opt Express ; 22(22): 27094-101, 2014 Nov 03.
Artigo em Inglês | MEDLINE | ID: mdl-25401860

RESUMO

A novel system has been developed that can capture the wide-field interference pattern generated by interfering two independent and incoherent laser sources. The interferograms are captured using a custom CMOS modulated light camera (MLC) which is capable of demodulating light in the megahertz region. Two stabilised HeNe lasers were constructed in order to keep the optical frequency difference (beat frequency) between the beams within the operational range of the camera.This system is based on previously reported work of an ultrastable heterodyne interferometer [Opt. Express 20, 17722 (2012)]. The system used an electronic feedback system to mix down the heterodyne signal captured at each pixel on the camera to cancel out the effects of time varying piston phase changes observed across the array. In this paper, a similar technique is used to track and negate the effects of beat frequency variations across the two laser pattern. This technique makes it possible to capture the full field interferogram caused by interfering two independent lasers even though the beat frequency is effectively random.As a demonstration of the system's widefield interferogram capture capability, an image of a phase shifting object is taken using a very simple two laser interferometer.

11.
Nat Ecol Evol ; 8(10): 1804-1814, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-39242871

RESUMO

Many attempts to scale conservation actions have failed to deliver their intended benefits, caused unintended harm or later been abandoned, hampering efforts to bend the curve on biodiversity loss. Here we encourage those calling for scaling to pause and reflect on past scaling efforts, which offer valuable lessons: the total impact of an action depends on both its effectiveness and scalability; effectiveness can change depending on scale for multiple reasons; feedback processes can change socio-ecological conditions influencing future adoption; and the drive to scale can incentivize bad practices that undermine long-term outcomes. Cutting across these themes is the recognition that monitoring scaling can enhance evidence-informed adaptive management, reporting and research. We draw on evidence and concepts from disparate fields, explore new linkages between often isolated concepts and suggest strategies for practitioners, policymakers and researchers. Reflecting on these five lessons may help in the scaling of effective conservation actions in responsible ways to meet the triple goals of reversing biodiversity loss, combating climate change and supporting human wellbeing.


Assuntos
Biodiversidade , Conservação dos Recursos Naturais , Mudança Climática
12.
Commun Biol ; 7(1): 451, 2024 Apr 15.
Artigo em Inglês | MEDLINE | ID: mdl-38622287

RESUMO

This report presents an optical fibre-based endo-microscopic imaging tool that simultaneously measures the topographic profile and 3D viscoelastic properties of biological specimens through the phenomenon of time-resolved Brillouin scattering. This uses the intrinsic viscoelasticity of the specimen as a contrast mechanism without fluorescent tags or photoacoustic contrast mechanisms. We demonstrate 2 µm lateral resolution and 320 nm axial resolution for the 3D imaging of biological cells and Caenorhabditis elegans larvae. This has enabled the first ever 3D stiffness imaging and characterisation of the C. elegans larva cuticle in-situ. A label-free, subcellular resolution, and endoscopic compatible technique that reveals structural biologically-relevant material properties of tissue could pave the way toward in-vivo elasticity-based diagnostics down to the single cell level.


Assuntos
Imageamento Tridimensional , Microscopia , Animais , Microscopia/métodos , Imageamento Tridimensional/métodos , Caenorhabditis elegans , Elasticidade , Biologia
13.
J Acoust Soc Am ; 133(2): 760-9, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23363095

RESUMO

Titanium metal matrix composites (TiMMCs) offer advantages over traditional materials for aerospace applications due to the increased mechanical strength of the materials. But the non-destructive inspection of these materials, especially with ultrasound, is in an infancy stage. If the manufacturing process of TiMMC is not correctly controlled, then disbonds and voids between the fibers can result. The effective microstructure of the composite makes difficulty to interpret results from traditional ultrasound techniques because of the scattering caused by fibers; the scattering prevents the ultrasound from penetrating far into the composite region and produces a background signal masking any reflections from voids. In this paper, relatively low frequency ultrasound is used to probe the composite region, and the state of the composite (porosity) is inferred from the velocity of the ultrasound traversing the composite. The relationship between the velocity and porosity is complex in this regime, so finite element (FE) analysis is used to model the composite regions and relate the velocity to the porosity. The FE simulated results are validated by ultrasound velocity measurements.


Assuntos
Aeronaves , Ligas/química , Análise de Elementos Finitos , Modelos Lineares , Teste de Materiais/métodos , Som , Titânio/química , Ultrassom , Simulação por Computador , Estrutura Molecular , Movimento (Física) , Porosidade , Reprodutibilidade dos Testes , Fatores de Tempo
14.
Sci Rep ; 13(1): 16228, 2023 09 27.
Artigo em Inglês | MEDLINE | ID: mdl-37758808

RESUMO

There is a consensus about the strong correlation between the elasticity of cells and tissue and their normal, dysplastic, and cancerous states. However, developments in cell mechanics have not seen significant progress in clinical applications. In this work, we explore the possibility of using phonon acoustics for this purpose. We used phonon microscopy to obtain a measure of the elastic properties between cancerous and normal breast cells. Utilising the raw time-resolved phonon-derived data (300 k individual inputs), we employed a deep learning technique to differentiate between MDA-MB-231 and MCF10a cell lines. We achieved a 93% accuracy using a single phonon measurement in a volume of approximately 2.5 µm3. We also investigated means for classification based on a physical model that suggest the presence of unidentified mechanical markers. We have successfully created a compact sensor design as a proof of principle, demonstrating its compatibility for use with needles and endoscopes, opening up exciting possibilities for future applications.


Assuntos
Aprendizado Profundo , Neoplasias , Fônons , Acústica , Linhagem Celular , Consenso
15.
Acta Biomater ; 166: 317-325, 2023 08.
Artigo em Inglês | MEDLINE | ID: mdl-37137402

RESUMO

Microrheology, the study of fluids on micron length-scales, promises to reveal insights into cellular biology, including mechanical biomarkers of disease and the interplay between biomechanics and cellular function. Here a minimally-invasive passive microrheology technique is applied to individual living cells by chemically binding a bead to the surface of a cell, and observing the mean squared displacement of the bead at timescales ranging from milliseconds to 100s of seconds. Measurements are repeated over the course of hours, and presented alongside analysis to quantify changes in the cells' low-frequency elastic modulus, G0', and the cell's dynamics over the time window ∼10-2 s to 10 s. An analogy to optical trapping allows verification of the invariant viscosity of HeLa S3 cells under control conditions and after cytoskeletal disruption. Stiffening of the cell is observed during cytoskeletal rearrangement in the control case, and cell softening when the actin cytoskeleton is disrupted by Latrunculin B. These data correlate with conventional understanding that integrin binding and recruitment triggers cytoskeletal rearrangement. This is, to our knowledge, the first time that cell stiffening has been measured during focal adhesion maturation, and the longest time over which such stiffening has been quantified by any means. STATEMENT OF SIGNIFICANCE: Here, we present an approach for studying mechanical properties of live cells without applying external forces or inserting tracers. Regulation of cellular biomechanics is crucial to healthy cell function. For the first time in literature, we can non-invasively and passively quantify cell mechanics during interactions with functionalised surface. Our method can monitor the maturation of adhesion sites on the surface of individual live cells without disrupting the cell mechanics by applying forces to the cell. We observe a stiffening response in cells over tens of minutes after a bead chemically binds. This stiffening reduces the deformation rate of the cytoskeleton, although the internal force generation increases. Our method has potential for applications to study mechanics during cell-surface and cell-vesicle interactions.


Assuntos
Citoesqueleto , Pinças Ópticas , Citoesqueleto/metabolismo , Membrana Celular/metabolismo , Módulo de Elasticidade , Citoesqueleto de Actina
16.
Photoacoustics ; 31: 100493, 2023 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-37180958

RESUMO

In this paper, we show a proof-of-concept method to parallelise phonon microscopy measurements for cell elasticity imaging by demonstrating a 3-fold increase in acquisition speed which is limited by current acquisition hardware. Phonon microscopy is based on time-resolved Brillouin scattering, which uses a pump-probe method with asynchronous optical sampling (ASOPS) to generate and detect coherent phonons. This enables access to the cell elasticity via the Brillouin frequency with sub-optical axial resolution. Although systems based on ASOPS are typically faster compared to the ones built with a mechanical delay line, they are still very slow to study real time changes at the cellular level. Additionally, the biocompatibility is reduced due to long light exposure and scanning time. Using a multi-core fibre bundle rather than a single channel for detection, we acquire 6 channels simultaneously allowing us to speed-up measurements, and open a way to scale-up this method.

17.
Opt Express ; 20(16): 17722-33, 2012 Jul 30.
Artigo em Inglês | MEDLINE | ID: mdl-23038324

RESUMO

A novel ultrastable widefield interferometer is presented. This uses a modulated light camera (MLC) to capture and stabilise the interferogram in the widefield heterodyne interferometer. This system eliminates the contribution of piston phase to the interferogram without the need for common path optics and results in a highly stable widefield interferometer. The MLC uses quadrature demodulation circuitry built into each pixel to demodulate the light signal and extract phase information using an electronic reference signal. In contrast to the work previously presented [Opt. Express 19, 24546 (2011)], the reference signal is derived from one of the pixels on board the MLC rather than an external source. This local reference signal tracks the instantaneous modulation frequency detected by the other pixels and eliminates the contribution of piston phase to the interferogram, substantially removing the contributions of unwanted vibrations and microphonics to the interferogram. Interferograms taken using the ultrastable system are presented with one of the interferometer mirrors moving at up to 85 mm s(-1) over a variety of frequencies from 18 Hz to 20 kHz (giving a variation in optical path length of 220 µm, or 350 wavelengths at 62 Hz). This limit was the result of complex motion in the mirror mount rather than the stability limit of the system. The system is shown to be insensitive to pure piston phase variations equivalent to an object velocity of over 3 m s(-1).

18.
J Acoust Soc Am ; 132(2): 738-45, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22894196

RESUMO

A previously described laser ultrasonic technique known as spatially resolved acoustic spectroscopy (SRAS) can be used to image surface microstructure, using the local surface acoustic wave (SAW) velocity as a contrast mechanism. It is shown here that measuring the SAW velocity in multiple directions can be used to determine the crystallographic orientation of grains. The orientations are determined by fitting experimentally measured velocities to theoretical velocities. Using this technique the orientations of 12 nickel and 3 aluminum single crystal samples have been measured, and these are compared with x-ray Laue backreflection (LBR) measurements with good agreement. The root mean square difference between SRAS and LBR measurements in terms of an R-value is less than 4.1°. The influence of systematic errors in the SAW velocity determination due to instrument miscalibration, which affects the accurate determination of the planes, is discussed. SRAS has great potential for complementary measurements or even for replacing established orientation determination and imaging techniques.


Assuntos
Alumínio/química , Cristalografia , Níquel/química , Análise Espectral , Ultrassom , Calibragem , Cristalografia/instrumentação , Cristalografia/normas , Cristalografia por Raios X , Elasticidade , Lasers , Modelos Químicos , Estrutura Molecular , Movimento (Física) , Reprodutibilidade dos Testes , Análise Espectral/instrumentação , Análise Espectral/normas , Propriedades de Superfície , Ultrassom/instrumentação , Ultrassom/normas
19.
ACS Photonics ; 9(6): 1919-1925, 2022 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-35726241

RESUMO

In this paper, we show for the first time the polarization-sensitive super-resolution phononic reconstruction of multiple nanostructures in a liquid environment by overcoming the diffraction limit of the optical system (1 µm). By using time-resolved pump-probe spectroscopy, we measure the acoustic signature of nanospheres and nanorods at different polarizations. This enables the size, position, and orientation characterization of multiple nanoparticles in a single point spread function with the precision of 5 nm, 3 nm, and 1.4°, respectively. Unlike electron microscopy where a high vacuum environment is needed for imaging, this technique performs measurements in liquids at ambient pressure, ideal to study the insights of living specimens. This is a potential path toward super-resolution phononic imaging where the acoustic signatures of multiple nanostructures could act as an alternative to fluorescent labels. In this context, phonons also offer the opportunity to extract information about the mechanical properties of the surrounding medium as well as access to subsurface features.

20.
Opt Express ; 19(24): 24546-56, 2011 Nov 21.
Artigo em Inglês | MEDLINE | ID: mdl-22109482

RESUMO

In this paper a method of taking widefield heterodyne interferograms using a prototype modulated light camera is described. This custom CMOS modulated light camera (MLC) uses analogue quadrature demodulation at each pixel to output the phase and amplitude of the modulated light as DC voltages. The heterodyne interference fringe patterns are generated using an acousto-optical frequency shifter (AOFS) in an arm of a Mach-Zehnder interferometer. Widefield images of fringe patterns acquired using the prototype MLC are presented. The phase can be measured to an accuracy of ±6.6°. The added value of this method to acquire widefield images are discussed along with the advantages.


Assuntos
Interferometria/instrumentação , Fotografação/instrumentação , Semicondutores , Processamento de Sinais Assistido por Computador/instrumentação , Desenho de Equipamento , Análise de Falha de Equipamento
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