RESUMO
In familial searching in forensic genetics, a query DNA profile is tested against a database to determine whether it represents a relative of a database entrant. We examine the potential for using linkage disequilibrium to identify pairs of profiles as belonging to relatives when the query and database rely on nonoverlapping genetic markers. Considering data on individuals genotyped with both microsatellites used in forensic applications and genome-wide SNPs, we find that â¼30%-32% of parent-offspring pairs and â¼35%-36% of sib pairs can be identified from the SNPs of one member of the pair and the microsatellites of the other. The method suggests the possibility of performing familial searches of microsatellite databases using query SNP profiles, or vice versa. It also reveals that privacy concerns arising from computations across multiple databases that share no genetic markers in common entail risks, not only for database entrants, but for their close relatives as well.
Assuntos
Família , Genética Forense/métodos , Genética Populacional/métodos , Técnicas de Genotipagem/métodos , Polimorfismo de Nucleotídeo Único , Feminino , Humanos , Desequilíbrio de Ligação , Masculino , Repetições de Microssatélites , Modelos Genéticos , Modelos Estatísticos , LinhagemRESUMO
The coalescent is a powerful statistical framework that allows us to infer past population dynamics leveraging the ancestral relationships reconstructed from sampled molecular sequence data. In many biomedical applications, such as in the study of infectious diseases, cell development, and tumorgenesis, several distinct populations share evolutionary history and therefore become dependent. The inference of such dependence is a highly important, yet a challenging problem. With advances in sequencing technologies, we are well positioned to exploit the wealth of high-resolution biological data for tackling this problem. Here, we present adaPop, a probabilistic model to estimate past population dynamics of dependent populations and to quantify their degree of dependence. An essential feature of our approach is the ability to track the time-varying association between the populations while making minimal assumptions on their functional shapes via Markov random field priors. We provide nonparametric estimators, extensions of our base model that integrate multiple data sources, and fast scalable inference algorithms. We test our method using simulated data under various dependent population histories and demonstrate the utility of our model in shedding light on evolutionary histories of different variants of SARS-CoV-2.
Assuntos
COVID-19 , Humanos , Teorema de Bayes , COVID-19/epidemiologia , SARS-CoV-2/genética , Dinâmica Populacional , Modelos Estatísticos , Algoritmos , Modelos Genéticos , Genética PopulacionalRESUMO
The prospect of utilizing CRISPR-based gene-drive technology for controlling populations has generated much excitement. However, the potential for spillovers of gene-drive alleles from the target population to non-target populations has raised concerns. Here, using mathematical models, we investigate the possibility of limiting spillovers to non-target populations by designing differential-targeting gene drives, in which the expected equilibrium gene-drive allele frequencies are high in the target population but low in the non-target population. We find that achieving differential targeting is possible with certain configurations of gene-drive parameters, but, in most cases, only under relatively low migration rates between populations. Under high migration, differential targeting is possible only in a narrow region of the parameter space. Because fixation of the gene drive in the non-target population could severely disrupt ecosystems, we outline possible ways to avoid this outcome. We apply our model to two potential applications of gene drives-field trials for malaria-vector gene drives and control of invasive species on islands. We discuss theoretical predictions of key requirements for differential targeting and their practical implications.
Assuntos
Tecnologia de Impulso Genético/métodos , Marcação de Genes/métodos , Malária/transmissão , Alelos , Animais , Sistemas CRISPR-Cas , Ecossistema , Frequência do Gene , Espécies Introduzidas/estatística & dados numéricos , Modelos Genéticos , Modelos Teóricos , RoedoresRESUMO
Gene drive technology, in which fast-spreading engineered drive alleles are introduced into wild populations, represents a promising new tool in the fight against vector-borne diseases, agricultural pests and invasive species. Due to the risks involved, gene drives have so far only been tested in laboratory settings while their population-level behaviour is mainly studied using mathematical and computational models. The spread of a gene drive is a rapid evolutionary process that occurs over timescales similar to many ecological processes. This can potentially generate strong eco-evolutionary feedback that could profoundly affect the dynamics and outcome of a gene drive release. We, therefore, argue for the importance of incorporating ecological features into gene drive models. We describe the key ecological features that could affect gene drive behaviour, such as population structure, life-history, environmental variation and mode of selection. We review previous gene drive modelling efforts and identify areas where further research is needed. As gene drive technology approaches the level of field experimentation, it is crucial to evaluate gene drive dynamics, potential outcomes, and risks realistically by including ecological processes.
Assuntos
Tecnologia de Impulso Genético , Evolução Biológica , Alelos , Retroalimentação , Dinâmica PopulacionalRESUMO
BACKGROUND: Sleep deprivation is known to be a risk factor for premenstrual syndrome and primary dysmenorrhea in adults. However, it has rarely been investigated in adolescents. The aim of this study was to investigate whether sleep pattern, duration, and quality independently affect premenstrual syndrome and primary dysmenorrhea in adolescent girls. An additional purpose was to investigate the sleep status in Korean adolescent girls during the COVID-19 pandemic. METHODS: A cross-sectional survey study was conducted in 519 high school girls aged 15 to 18 years in Gyeonggido, South Korea, in 2021 during the COVID-19 lockdown. Menstrual pain intensity and menstrual symptoms were assessed using the visual analogue scale (VAS) and Cox menstrual symptom scale (CMSS), respectively. Premenstrual syndrome was assessed by the premenstrual symptoms screening tool (PSST). Sleep was assessed by the Pittsburgh Sleep Quality Index (PSQI). The known risk factors of dysmenorrhea, including menstrual and lifestyle characteristics and stress, were assessed as covariates. RESULTS: During the pandemic, approximately 68% of girls slept 7 h or less, while about 60% reported poor sleep quality. Additionally, 64% of participants had a bedtime later after 1AM, and 34% woke up later after 8AM. Late bedtime significantly affected VAS (P = 0.05), CMSS severity and frequency (both P < 0.01), and PSST symptom (P < 0.01). Waking up late affected CMSS severity (P < 0.05), PSST symptom (P = 0.05), and PSST function (P < 0.05). However, the significance of these effects disappeared after controlling for covariates. Sleeping less than 5 h affected CMSS frequency (P < 0.05) and PSST symptoms (P < 0.001). After controlling for covariates, the significance of the effect on PSST symptom remained (P < 0.05). General sleep quality and PSQI components, including subjective sleep quality, sleep latency, sleep disturbance, use of sleeping medication, and daytime dysfunction, significantly affected CMSS frequency and severity and PSST symptom after controlling for covariates (P < 0.05, P < 0.01, or P < 0.001). The multiple regression analysis revealed that among sleep characteristics, sleep quality was the most important risk factor of premenstrual syndrome and dysmenorrhea. CONCLUSION: Our study result heightens the importance of healthy sleep hygiene, especially sleep quality in the management of premenstrual syndrome and dysmenorrhea in adolescent girls.
Assuntos
COVID-19 , Síndrome Pré-Menstrual , Feminino , Adolescente , Adulto , Humanos , Dismenorreia/epidemiologia , Estudos Transversais , Pandemias , Controle de Doenças Transmissíveis , Síndrome Pré-Menstrual/epidemiologia , Sono , República da Coreia/epidemiologiaRESUMO
Genealogical tree modeling is essential for estimating evolutionary parameters in population genetics and phylogenetics. Recent mathematical results concerning ranked genealogies without leaf labels unlock opportunities in the analysis of evolutionary trees. In particular, comparisons between ranked genealogies facilitate the study of evolutionary processes of different organisms sampled at multiple time periods. We propose metrics on ranked tree shapes and ranked genealogies for lineages isochronously and heterochronously sampled. Our proposed tree metrics make it possible to conduct statistical analyses of ranked tree shapes and timed ranked tree shapes or ranked genealogies. Such analyses allow us to assess differences in tree distributions, quantify estimation uncertainty, and summarize tree distributions. We show the utility of our metrics via simulations and an application in infectious diseases.
Assuntos
Genética Populacional/métodos , Análise de Sequência de DNA/métodos , Evolução Biológica , Simulação por Computador , Modelos Genéticos , Linhagem , FilogeniaRESUMO
Soft-tissue calcifications in the head and neck are relatively common and are the result of a wide variety of benign and malignant pathologies. They can present a diagnostic challenge given the broad range of underlying etiologies. Uremic tumoral calcinosis (UTC) is a rare complication of end-stage renal disease (ESRD) resulting from metastatic soft tissue calcification. Common sites include periarticular soft tissues of the shoulders, elbows, and hands (Pan and Chen, 2016). UTC can also affect the cervical spine and mimic osteosarcomas (Zhou et al., 2018). We present the case of a 71-year-old female with hypertension, left carotid artery stenosis, mitral valve prolapse, and ESRD secondary to diabetes mellitus type II (DMII) on peritoneal dialysis who was found to have large, heterogeneous, bilateral calcified neck masses. Given her clinical history, laboratory results, and imaging findings, she was diagnosed with UTC. In addition to this case, we provide an overview of tumoral calcinosis (TC) and a differential diagnosis for calcified lesions of the head and neck.
Assuntos
Calcinose , Falência Renal Crônica , Humanos , Feminino , Idoso , Calcinose/complicações , Calcinose/diagnóstico por imagem , Pescoço , Falência Renal Crônica/complicações , Falência Renal Crônica/terapia , Vértebras Cervicais , CabeçaRESUMO
Wireless sensor networks (WSNs) have been utilized as communication infrastructure for smart grid applications. The primary requirement of WSNs for smart grid applications is to transmit delay-critical data from smart grid assets ether at the maximum rate or by reducing collision rates. Additionally, WSNs should utilize the limited resources of the network to provide the required long-term QoS. The achievement of these objectives requires a remarkable design of WSN protocols to satisfy the requirements of smart grid applications. In this study, a multi-channel cluster tree protocol is proposed to prevent collisions and increase network performance. In the proposed scheme, the cluster head serves to broadcast a beacon frame containing information on the allocated channels and time slots. This enables the new node to determine its channel and timeslot. A performance analysis reveals that the proposed scheme can achieve a low end-to-end delay and low collision rates compared with the well-known IEEE 802.15.4 MAC protocols widely used in the literature to provide QoS to smart-grid applications.
Assuntos
Redes de Comunicação de Computadores , Tecnologia sem FioRESUMO
Genomic surveillance of SARS-CoV-2 has been instrumental in tracking the spread and evolution of the virus during the pandemic. The availability of SARS-CoV-2 molecular sequences isolated from infected individuals, coupled with phylodynamic methods, have provided insights into the origin of the virus, its evolutionary rate, the timing of introductions, the patterns of transmission, and the rise of novel variants that have spread through populations. Despite enormous global efforts of governments, laboratories, and researchers to collect and sequence molecular data, many challenges remain in analyzing and interpreting the data collected. Here, we describe the models and methods currently used to monitor the spread of SARS-CoV-2, discuss long-standing and new statistical challenges, and propose a method for tracking the rise of novel variants during the epidemic.
RESUMO
The IEEE 802.15.4 standard is recognized as one of the most successful for short-range low-rate wireless communications and is used in Internet of Things (IoT) applications. To improve the performance of wireless networks, interest in protocols that rely on interaction between different layers has increased. Cross-layer design has become an issue in wireless communication systems as it can improve the capacity of wireless networks by optimizing cooperation between multiple layers that constitute network systems. Power efficiency and network scalability must be addressed to spread IoT. In multi-hop networks, many devices share wireless media and are geographically distributed; consequently, efficient medium access control (MAC) and routing protocols are required to mitigate interference and improve reliability. Cross-layer design is a novel network design approach to support flexible layer techniques in IoT. We propose a cross-layer protocol for the MAC layer and routing layer to satisfy the requirements of various networks. The proposed scheme enables scalable and reliable mesh networking using the IEEE 802.15.4 standard and provides robust connectivity and efficient path discovery procedures. It also proposes a novel address-allocation technique to improve address-allocation methods that cannot support large sensor networks. Simulation results indicate that the proposed scheme could improve reliability and reduce end-to-end delay.
Assuntos
Redes de Comunicação de Computadores , Tecnologia sem Fio , Reprodutibilidade dos Testes , Simulação por Computador , InternetRESUMO
A smart grid is a next-generation intelligent power grid that can maximize energy efficiency by monitoring power information in real time and by controlling the flow of power by introducing IT communication technology to the existing power grid. In order to apply a wireless communication network to a smart grid, it is necessary to be able to efficiently process large amounts of power-related data while enabling a high level of reliability and quality of service (QoS) support. In addition, international standards-based design is essential considering compatibility and scalability. The IEEE 802.15.4 standard is considered to be the most powerful communication method for processing data through the smart grid AMI. To reduce the energy consumption, as the duty cycle of the superframe increases, the probability of the congestion increases. However, this binary exponential algorithm in IEEE 802.15.4 standard does not account for the application of traffic characteristics that essentially negatively affect the smart grid network performances in terms of packet delivery ratio and time delay. Therefore, in this paper, we propose a new transmission scheme to reduce performance degradation by excessive collisions in the content access period (CAP), when data transmission is performed in IEEE 802.15.4 applied to smart grids. In addition, we investigated the main research topics required when applying wireless networking technology to smart grids and suggested improvement measures. Simulation results showed that the proposed scheme increased the data delivery rate and reduced the latency, and it was confirmed that reliability was improved.
Assuntos
Sistemas Computacionais , Projetos de Pesquisa , Reprodutibilidade dos Testes , Probabilidade , Tecnologia da InformaçãoRESUMO
OBJECTIVES: In genetic admixture processes, source groups for an admixed population possess distinct patterns of genotype and phenotype at the onset of admixture. Particularly in the context of recent and ongoing admixture, such differences are sometimes taken to serve as markers of ancestry for individuals-that is, phenotypes initially associated with the ancestral background in one source population are assumed to continue to reflect ancestry in that population. Such phenotypes might possess ongoing significance in social categorizations of individuals, owing in part to perceived continuing correlations with ancestry. However, genotypes or phenotypes initially associated with ancestry in one specific source population have been seen to decouple from overall admixture levels, so that they no longer serve as proxies for genetic ancestry. Here, we aim to develop an understanding of the joint dynamics of admixture levels and phenotype distributions in an admixed population. METHODS: We devise a mechanistic model, consisting of an admixture model, a quantitative trait model, and a mating model. We analyze the behavior of the mechanistic model in relation to the model parameters. RESULTS: We find that it is possible for the decoupling of genetic ancestry and phenotype to proceed quickly, and that it occurs faster if the phenotype is driven by fewer loci. Positive assortative mating attenuates the process of dissociation relative to a scenario in which mating is random with respect to genetic admixture and with respect to phenotype. CONCLUSIONS: The mechanistic framework suggests that in an admixed population, a trait that initially differed between source populations might serve as a reliable proxy for ancestry for only a short time, especially if the trait is determined by few loci. It follows that a social categorization based on such a trait is increasingly uninformative about genetic ancestry and about other traits that differed between source populations at the onset of admixture.
Assuntos
Frequência do Gene/genética , Genética Populacional , Antropologia Física , Feminino , Fluxo Gênico/genética , Genoma Humano/genética , Genótipo , Humanos , Masculino , Fenótipo , Pigmentação da Pele/genéticaRESUMO
BACKGROUND: Reduction malarplasty has been popular among Asians with a wide facial width. In general, malar setback after bony resection is regarded as the standard objective of reduction malarplasty. However, unnecessary bony resection may lead to various postoperative complications. Therefore, we suggest the use of reduction malarplasty without bony resection to achieve a similar narrowing effect of the facial width, based on radiographic analysis of malar arch movement. PATIENTS AND METHODS: This retrospective study analyzed 48 patients with a wide midface who underwent reduction malarplasty between September 2018 and December 2019. We included 40 cases of advancement repositioning malarplasty (AR) without bony resection and 8 cases of setback reduction malarplasty (SR) with bony resection. The three-dimensional position of the malar arch expressed by coordinates (x, y, and z) on three-dimensional computed tomography scans was used to compare the positional change between the surgical methods. The paired t-test, Wilcoxon text, and independent t-test were used in data analysis, and statistical analysis was performed using SPSS 23.0 software. RESULTS: Medial and superior movement of the freed malar arch segment was significantly different between AR and SR (P < 0.05). Although medialization and superiorization were not significantly different between AR and SR, there was a significant difference in anterior-posterior movement between AR and SR (P < 0.05). CONCLUSION: The radiologic analysis based on malar arch movement between AR and SR showed similar narrowing effects on medialization and superiorization of the malar arch regardless of bony resection. Therefore, the AR can be effectively applied in case of arch dominant type or malar asymmetry. In addition, further comprehensive study including analysis on movement of facial soft tissue following malar bony movement is expected based on this study in near future.
Assuntos
Procedimentos de Cirurgia Plástica , Zigoma , Humanos , Osteotomia , Estudos Retrospectivos , Tomografia Computadorizada por Raios X , Zigoma/diagnóstico por imagem , Zigoma/cirurgiaRESUMO
BACKGROUND: Oxidative stress induced by chronic hyperglycemia is recognized as a significant mechanistic contributor to the development of diabetic kidney disease (DKD). Nonphagocytic nicotinamide adenine dinucleotide phosphate oxidase 4 (Nox4) is a major source of reactive oxygen species (ROS) in many cell types and in the kidney tissue of diabetic animals. We designed this study to explore the therapeutic potential of chloroquine (CQ) and amodiaquine (AQ) for inhibiting mitochondrial Nox4 and diabetic tubular injury. METHODS: Human renal proximal tubular epithelial cells (hRPTCs) were cultured in high-glucose media (30 mM D-glucose), and diabetes was induced with streptozotocin (STZ, 50 mg/kg i.p. for 5 days) in male C57BL/6J mice. CQ and AQ were administered to the mice via intraperitoneal injection for 14 weeks. RESULTS: CQ and AQ inhibited mitochondrial Nox4 and increased mitochondrial mass in hRPTCs under high-glucose conditions. Reduced mitochondrial ROS production after treatment with the drugs resulted in decreased endoplasmic reticulum (ER) stress, suppressed inflammatory protein expression and reduced cell apoptosis in hRPTCs under high-glucose conditions. Notably, CQ and AQ treatment diminished Nox4 activation and ER stress in the kidneys of STZ-induced diabetic mice. In addition, we observed attenuated inflammatory protein expression and albuminuria in STZ-induced diabetic mice after CQ and AQ treatment. CONCLUSION: We substantiated the protective actions of CQ and AQ in diabetic tubulopathy associated with reduced mitochondrial Nox4 activation and ER stress alleviation. Further studies exploring the roles of mitochondrial Nox4 in the pathogenesis of DKD could suggest new therapeutic targets for patients with DKD.
Assuntos
Amodiaquina/farmacologia , Cloroquina/farmacologia , Estresse do Retículo Endoplasmático/efeitos dos fármacos , Mitocôndrias/metabolismo , NADPH Oxidase 4/metabolismo , Amodiaquina/química , Amodiaquina/metabolismo , Amodiaquina/uso terapêutico , Animais , Apoptose/efeitos dos fármacos , Células Cultivadas , Cloroquina/química , Cloroquina/metabolismo , Cloroquina/uso terapêutico , Diabetes Mellitus Experimental/induzido quimicamente , Diabetes Mellitus Experimental/tratamento farmacológico , Diabetes Mellitus Experimental/patologia , Diabetes Mellitus Tipo 1/patologia , Glucose/farmacologia , Humanos , Túbulos Renais Proximais/citologia , Túbulos Renais Proximais/metabolismo , Masculino , Camundongos , Camundongos Endogâmicos C57BL , NADPH Oxidase 4/antagonistas & inibidores , Espécies Reativas de Oxigênio/metabolismoRESUMO
This paper presents an energy-optimized electronic performance tracking system (EPTS) device for analyzing the athletic movements of football players. We first develop a tiny battery-operated wearable device that can be attached to the backside of field players. In order to analyze the strategic performance, the proposed wearable EPTS device utilizes the GNSS-based positioning solution, the IMU-based movement sensing system, and the real-time data acquisition protocol. As the life-time of the EPTS device is in general limited due to the energy-hungry GNSS sensing operations, for the energy-efficient solution extending the operating time, in this work, we newly develop the advanced optimization methods that can reduce the number of GNSS accesses without degrading the data quality. The proposed method basically identifies football activities during the match time, and the sampling rate of the GNSS module is dynamically relaxed when the player performs static movements. A novel deep convolution neural network (DCNN) is newly developed to provide the accurate classification of human activities, and various compression techniques are applied to reduce the model size of the DCNN algorithm, allowing the on-device DCNN processing even at the memory-limited EPTS device. Experimental results show that the proposed DCNN-assisted sensing control can reduce the active power by 28%, consequently extending the life-time of the EPTS device more than 1.3 times.
Assuntos
Compressão de Dados , Futebol , Dispositivos Eletrônicos Vestíveis , Algoritmos , Humanos , Redes Neurais de ComputaçãoRESUMO
We examined the effects of empagliflozin, a selective inhibitor of Na+-glucose cotransporter 2, on mitochondrial quality control and autophagy in renal tubular cells in a diabetic environment in vivo and in vitro. Human renal proximal tubular cells (hRPTCs) were incubated under high-glucose conditions. Diabetes was induced with streptozotocin in male C57BL/6J mice. Improvements in mitochondrial biogenesis and balanced fusion-fission protein expression were noted in hRPTCs after treatment with empagliflozin in high-glucose media. Empagliflozin also increased autophagic activities in renal tubular cells in the high-glucose environment, which was accompanied with mammalian target of rapamycin inhibition. Moreover, reduced mitochondrial reactive oxygen species production and decreased apoptotic and fibrotic protein expression were observed in hRPTCs after treatment with empagliflozin, even in the hyperglycemic circumstance. Importantly, empagliflozin restored AMP-activated protein kinase-α phosphorylation and normalized levels of AMP-to-ATP ratios in hRPTCs subjected to a high-glucose environment, which suggests the way that empagliflozin is involved in mitochondrial quality control. Empagliflozin effectively suppressed Na+-glucose cotransporter 2 expression and ameliorated renal morphological changes in the kidneys of streptozotocin-induced diabetic mice. Electron microscopy analysis showed that mitochondrial fragmentation was decreased and 8-hydroxy-2'-deoxyguanosine content was low in renal tubular cells of empagliflozin treatment groups compared with those of the diabetic control group. We suggest one mechanism related to the renoprotective actions of empagliflozin, which reverse mitochondrial dynamics and autophagy.
Assuntos
Autofagia/efeitos dos fármacos , Compostos Benzidrílicos/uso terapêutico , Nefropatias Diabéticas/tratamento farmacológico , Nefropatias Diabéticas/patologia , Glucosídeos/uso terapêutico , Mitocôndrias/efeitos dos fármacos , Mitocôndrias/patologia , Inibidores do Transportador 2 de Sódio-Glicose/uso terapêutico , Monofosfato de Adenosina/metabolismo , Trifosfato de Adenosina/metabolismo , Animais , Proteínas Reguladoras de Apoptose/antagonistas & inibidores , Linhagem Celular , Diabetes Mellitus Experimental/tratamento farmacológico , Diabetes Mellitus Experimental/genética , Diabetes Mellitus Experimental/patologia , Expressão Gênica/efeitos dos fármacos , Humanos , Túbulos Renais Proximais/efeitos dos fármacos , Túbulos Renais Proximais/patologia , Masculino , Camundongos , Camundongos Endogâmicos C57BL , Biogênese de Organelas , Espécies Reativas de Oxigênio/metabolismo , Transportador 2 de Glucose-Sódio/metabolismoRESUMO
The neighbor-joining algorithm for phylogenetic inference (NJ) has been seen to have three specific properties when applied to distance matrices that contain an admixed taxon: (1) antecedence of clustering, in which the admixed taxon agglomerates with one of its source taxa before the two source taxa agglomerate with each other; (2) intermediacy of distances, in which the distance on an inferred NJ tree between an admixed taxon and either of its source taxa is smaller than the distance between the two source taxa; and (3) intermediacy of path lengths, in which the number of edges separating the admixed taxon and either of its source taxa is less than or equal to the number of edges between the source taxa. We examine the behavior of neighbor-joining on distance matrices containing an admixed group, investigating the occurrence of antecedence of clustering, intermediacy of distances, and intermediacy of path lengths. We first mathematically predict the frequency with which the properties are satisfied for a labeled unrooted binary tree selected uniformly at random in the absence of admixture. We then introduce a taxon constructed by a linear admixture of distances from two source taxa, examining three admixture scenarios by simulation: a model in which distance matrices are chosen at random, a model in which an admixed taxon is added to a set of taxa that reflect treelike evolution, and a model that introduces a perturbation of the treelike scenario. In contrast to previous conjectures, we observe that the three properties are sometimes violated by distance matrices that include an admixed taxon. However, we also find that they are satisfied more often than is expected by chance when the distance matrix contains an admixed taxon, especially when evolution among the non-admixed taxa is treelike. The results contribute to a deeper understanding of the nature of evolutionary trees constructed from data that do not necessarily reflect a treelike evolutionary process.
Assuntos
Algoritmos , Filogenia , Análise por Conglomerados , Biologia Computacional , Simulação por Computador , Evolução Molecular , Conceitos Matemáticos , Modelos Genéticos , Modelos Estatísticos , ProbabilidadeRESUMO
BACKGROUND: A complete release of the transverse nasalis aponeurotic fibers (TNAFs) during Asian rhinoplasty is critical for accurate positioning of the nasal implant and lengthening of the short nose. The objectives of this article are to clarify the anatomy of the TNAFs using cadaveric dissections and to present the clinical results after complete TNAF release in Asian rhinoplasty. METHODS: An anatomical dissection was performed in 8 cadavers to study the TNAFs, specifically the origin, insertion, and boundary of the TNAFs and the effect of the TNAF release on nasal length. Between January 2012 and December 2014, 2314 open implant augmentation rhinoplasties (1777 primary and 537 secondary) were performed by the senior author (J.J.). The records of these patients were retrospectively reviewed for results of TNAF release. A separately designed prospective clinical study was performed to document the nasal envelope extension after TNAF release in 52 consecutive patients. RESULTS: In the cadaver study, the anatomy and the boundaries of the TNAFs were clearly visualized and documented. With accurate release of the TNAFs, the ideal pocket for nasal implant can be defined, and the effect of the release of the TNAFs recorded. Release of the TNAFs also allows extension of the nasal envelope. However, measurements of the nasal envelope were not studied in the cadaver because the skin was degloved.From the clinical study with a follow-up ranging from 6 months to 1.5 years, the overall complication of open rhinoplasty using silicone implants incorporating TNAF release was 6%. In this group, 3.4% of patients required revision rhinoplasty. Releasing the TNAFs ensures an accurate implant pocket reducing the risk of implant deviation and implant visibility and increases the nasal length by 2.1 mm. CONCLUSIONS: Complete release of the TNAFs is especially important in Asian rhinoplasty to facilitate accurate pocket dissection, allowing the extension of the nasal envelope in order to correct short nose or secondary contracted nose.
Assuntos
Povo Asiático , Nariz/inervação , Rinoplastia/métodos , Adulto , Cadáver , Dissecação , Feminino , Humanos , Masculino , Próteses e ImplantesRESUMO
BACKGROUND: DNA microarrays offer motivation and hope for the simultaneous study of variations in multiple genes. Gene expression is a temporal process that allows variations in expression levels with a characterized gene function over a period of time. Temporal gene expression curves can be treated as functional data since they are considered as independent realizations of a stochastic process. This process requires appropriate models to identify patterns of gene functions. The partitioning of the functional data can find homogeneous subgroups of entities for the massive genes within the inherent biological networks. Therefor it can be a useful technique for the analysis of time-course gene expression data. We propose a new self-consistent partitioning method of functional coefficients for individual expression profiles based on the orthonormal basis system. RESULTS: A principal points based functional partitioning method is proposed for time-course gene expression data. The method explores the relationship between genes using Legendre coefficients as principal points to extract the features of gene functions. Our proposed method provides high connectivity in connectedness after clustering for simulated data and finds a significant subsets of genes with the increased connectivity. Our approach has comparative advantages that fewer coefficients are used from the functional data and self-consistency of principal points for partitioning. As real data applications, we are able to find partitioned genes through the gene expressions found in budding yeast data and Escherichia coli data. CONCLUSIONS: The proposed method benefitted from the use of principal points, dimension reduction, and choice of orthogonal basis system as well as provides appropriately connected genes in the resulting subsets. We illustrate our method by applying with each set of cell-cycle-regulated time-course yeast genes and E. coli genes. The proposed method is able to identify highly connected genes and to explore the complex dynamics of biological systems in functional genomics.
Assuntos
Perfilação da Expressão Gênica/métodos , Regulação Bacteriana da Expressão Gênica , Regulação Fúngica da Expressão Gênica , Algoritmos , Análise por Conglomerados , Escherichia coli/genética , Ontologia Genética , Análise de Sequência com Séries de Oligonucleotídeos , Saccharomyces cerevisiae/genética , Processos EstocásticosRESUMO
Wrinkle-free graphene was used to form the source-drain electrodes in thin film transistors based on a zinc tin oxide (ZTO) semiconductor. A 10 nm thick titanium adhesion layer was applied prior to transferring a conductive graphene film on top of it by chemical detachment. The formation of an interlayer oxide between titanium and graphene allows the achievement of uniform surface roughness over the entire substrate area. The resulting devices were thermally treated in ambient air, and a substantial decrease in field effect mobility is observed with increasing annealing temperature. The increase in electrical resistivity of the graphene film at higher annealing temperatures may have some influence, however the growth of the oxide interlayer at the ZTO/Ti boundary is suggested to be most influential, thereby inducing relatively high contact resistance.