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1.
Nucleic Acids Res ; 52(2): 856-871, 2024 Jan 25.
Artigo em Inglês | MEDLINE | ID: mdl-38084890

RESUMO

Shiga toxin (Stx) released by Shiga toxin producing Escherichia coli (STEC) causes life-threatening illness. Its production and release require induction of Stx-encoding prophage resident within the STEC genome. We identified two different STEC strains, PA2 and PA8, bearing Stx-encoding prophage whose sequences primarily differ by the position of an IS629 insertion element, yet differ in their abilities to kill eukaryotic cells and whose prophages differ in their spontaneous induction frequencies. The IS629 element in ϕPA2, disrupts an ORF predicted to encode a DNA adenine methyltransferase, whereas in ϕPA8, this element lies in an intergenic region. Introducing a plasmid expressing the methyltransferase gene product into ϕPA2 bearing-strains increases both the prophage spontaneous induction frequency and virulence to those exhibited by ϕPA8 bearing-strains. However, a plasmid bearing mutations predicted to disrupt the putative active site of the methyltransferase does not complement either of these defects. When complexed with a second protein, the methyltransferase holoenzyme preferentially uses 16S rRNA as a substrate. The second subunit is responsible for directing the preferential methylation of rRNA. Together these findings reveal a previously unrecognized role for rRNA methylation in regulating induction of Stx-encoding prophage.


Assuntos
Metiltransferases , Prófagos , Escherichia coli Shiga Toxigênica , Humanos , Infecções por Escherichia coli/microbiologia , Metiltransferases/genética , Prófagos/genética , RNA Ribossômico 16S , Escherichia coli Shiga Toxigênica/genética , Escherichia coli Shiga Toxigênica/patogenicidade , Escherichia coli Shiga Toxigênica/virologia , Virulência
2.
BMC Genomics ; 20(1): 504, 2019 Jun 17.
Artigo em Inglês | MEDLINE | ID: mdl-31208335

RESUMO

BACKGROUND: Enterohemorrhagic Escherichia coli (E. coli) are intestinal pathogenic bacteria that cause life-threatening disease in humans. Their cardinal virulence factor is Shiga toxin (Stx), which is encoded on lambdoid phages integrated in the chromosome. Stx phages can infect and lysogenize susceptible bacteria, thus either increasing the virulence of already pathogenic bacterial hosts or transforming commensal strains into potential pathogens. There is increasing evidence that Stx phage-encoded factors adaptively regulate bacterial host gene expression. Here, we investigated the effects of Stx phage carriage in E. coli K-12 strain MG1655. We compared the transcriptome and phenotype of naive MG1655 and two lysogens carrying closely related Stx2a phages: ϕO104 from the exceptionally pathogenic 2011 E. coli O104:H4 outbreak strain and ϕPA8 from an E. coli O157:H7 isolate. RESULTS: Analysis of quantitative RNA sequencing results showed that, in comparison to naive MG1655, genes involved in mixed acid fermentation were upregulated, while genes encoding NADH dehydrogenase I, TCA cycle enzymes and proteins involved in the transport and assimilation of carbon sources were downregulated in MG1655::ϕO104 and MG1655::ϕPA8. The majority of the changes in gene expression were found associated with the corresponding phenotypes. Notably, the Stx2a phage lysogens displayed moderate to severe growth defects in minimal medium supplemented with single carbon sources, e.g. galactose, ribose, L-lactate. In addition, in phenotype microarray assays, the Stx2a phage lysogens were characterized by a significant decrease in the cell respiration with gluconeogenic substrates such as amino acids, nucleosides, carboxylic and dicarboxylic acids. In contrast, MG1655::ϕO104 and MG1655::ϕPA8 displayed enhanced respiration with several sugar components of the intestinal mucus, e.g. arabinose, fucose, N-acetyl-D-glucosamine. We also found that prophage-encoded factors distinct from CI and Cro were responsible for the carbon utilization phenotypes of the Stx2a phage lysogens. CONCLUSIONS: Our study reveals a profound impact of the Stx phage carriage on E. coli carbon source utilization. The Stx2a prophage appears to reprogram the carbon metabolism of its bacterial host by turning down aerobic metabolism in favour of mixed acid fermentation.


Assuntos
Carbono/metabolismo , Escherichia coli O157/genética , Escherichia coli O157/metabolismo , Regulação Bacteriana da Expressão Gênica , Prófagos/fisiologia , Toxina Shiga/metabolismo , Escherichia coli O157/crescimento & desenvolvimento , Escherichia coli O157/virologia , Perfilação da Expressão Gênica , Fenótipo , Prófagos/metabolismo
3.
Int J Med Microbiol ; 308(7): 956-961, 2018 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-30030029

RESUMO

Shiga toxin-producing Escherichia coli (STEC) are a diverse group of strains that are implicated in over 270,000 cases of human illness annually in the United States alone. Shiga toxin (Stx), encoded by a resident temperate lambdoid bacteriophage, is the main STEC virulence factor. Although the population structure of E. coli O157:H7, the most common disease-causing STEC strain, is highly homogenous, the range of clinical illness caused by this strain varies by dramatically outbreak, suggesting that human virulence is evolving. However, the factors governing this variation in disease severity are poorly understood. STEC evolved from an O55:H7-like progenitor into a human pathogen. In addition to causing human disease, Stx released from STEC kill bacterivorous protist predators and enhance bacterial survival in the face of protist predation. Cattle are the primary reservoir for STEC and protists and bacteria occur together within the ruminant intestinal tract. Cattle associated STEC are not highly pathogenic to humans. These observations suggest that disease causing STEC strains evolved from cattle-associated "antipredator" STEC strains. To test this idea and to gain insight into the features that govern the evolution of STEC from a commensal strain of ruminants strain to virulent human pathogen, we compared the predation resistance of STEC strains isolated from asymptomatic infected cows and human patients. We find that STEC O157:H7 progenitor lineages and clades are more effective than human associated ones at killing the types of protist predators. In addition, our results indicate that the presence of Stx2c-containing bacteriophage is associated with more efficient amoeba killing. Also, these phage apparently also encode Q21-like version of the Q antitermination protein, the protein that controls expression of Stx.


Assuntos
Acanthamoeba castellanii/microbiologia , Escherichia coli O157/genética , Escherichia coli O157/patogenicidade , Toxina Shiga II/genética , Toxina Shiga II/metabolismo , Acanthamoeba castellanii/crescimento & desenvolvimento , Animais , Proteínas de Bactérias/genética , Bacteriófagos/genética , Bovinos , Doenças dos Bovinos/microbiologia , Infecções por Escherichia coli/microbiologia , Humanos , Proteínas de Ligação a RNA/genética , Fatores de Virulência/genética , Fatores de Virulência/metabolismo
4.
Cell Microbiol ; 18(10): 1459-70, 2016 10.
Artigo em Inglês | MEDLINE | ID: mdl-26990156

RESUMO

Predation by phagocytic predators is a major source of bacterial mortality. The first steps in protozoan predation are recognition and consumption of their bacterial prey. However, the precise mechanisms governing prey recognition and phagocytosis by protists, and the identities of the molecular and cellular factors involved in these processes are, as yet, ill-characterized. Here, we show that that the ability of the phagocytic bacterivorous amoebae, Acanthamoeba castellanii, to recognize and internalize Escherichia coli, a bacterial prey, varies with LPS structure and composition. The presence of an O-antigen carbohydrate is not required for uptake of E. coli by A. castellanii. However, O1-antigen types, not O157 O-antigen types, inhibit recognition and uptake of bacteria by amoeba. This finding implies that O-antigen may function as an antipredator defence molecule. Recognition and uptake of E. coli by A. castellanii is mediated by the interaction of mannose-binding protein located on amoebae's surface with LPS carbohydrate. Phagocytic mammalian cells also use mannose-binding lectins to recognize and/or mediate phagocytosis of E. coli. Nonetheless, A. castellanii's mannose binding protein apparently displays no sequence similarity with any known metazoan mannose binding protein. Hence, the similarity in bacterial recognition mechanisms of amoebae and mammalian phagocytes may be a result of convergent evolution.


Assuntos
Acanthamoeba castellanii/microbiologia , Escherichia coli O157/fisiologia , Acanthamoeba castellanii/imunologia , Acanthamoeba castellanii/metabolismo , Células Cultivadas , Interações Hospedeiro-Patógeno , Lipopolissacarídeos/farmacologia , Lectina de Ligação a Manose/fisiologia
5.
J Biol Chem ; 290(36): 22101-10, 2015 Sep 04.
Artigo em Inglês | MEDLINE | ID: mdl-26195629

RESUMO

ETS1 is the archetype of the ETS transcription factor (TF) family. ETS TFs share a DNA-binding domain, the ETS domain. All ETS TFs recognize a core GGA(A/T) binding site, and thus ETS TFs are found to redundantly regulate the same genes. However, each ETS TF has unique targets as well. One prevailing hypotheses explaining this duality is that protein-protein interactions, including homodimerization, allow each ETS TF to display distinct behavior. The behavior of ETS1 is further regulated by autoinhibition. Autoinhibition apparently modulates ETS1 DNA binding affinity, but the mechanism of this inhibition is not completely understood. We sought to characterize the relationship between DNA binding and ETS1 homodimer formation. We find that ETS1 interrogates DNA and forms dimers even when the DNA does not contain an ETS recognition sequence. Mutational studies also link nonspecific DNA backbone contacts with dimer formation, in addition to providing a new role for the recognition helix of ETS1 in maintaining the autoinhibited state. Finally, in showing that residues in the DNA recognition helix affect autoinhibition, we define a new function of ETS1 autoinhibition: maintenance of a monomeric state in the absence of DNA. The conservation of relevant amino acid residues across all ETS TFs indicates that the mechanisms of nonspecific DNA interrogation and protein oligomer formation elucidated here may be common to all ETS proteins that autoinhibit.


Assuntos
DNA/química , Multimerização Proteica , Proteína Proto-Oncogênica c-ets-1/química , Fatores de Transcrição/química , Sítios de Ligação/genética , Ligação Competitiva , Dicroísmo Circular , DNA/metabolismo , Pegada de DNA/métodos , Desoxirribonuclease I/metabolismo , Humanos , Proteínas Mutantes/química , Proteínas Mutantes/metabolismo , Mutação , Oligonucleotídeos/química , Oligonucleotídeos/metabolismo , Ligação Proteica , Proteína Proto-Oncogênica c-ets-1/genética , Proteína Proto-Oncogênica c-ets-1/metabolismo , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo
6.
Nucleic Acids Res ; 42(22): 14053-9, 2014 Dec 16.
Artigo em Inglês | MEDLINE | ID: mdl-25429976

RESUMO

The DNA sequence preferences of nearly all sequence specific DNA binding proteins are influenced by the identities of bases that are not directly contacted by protein. Discrimination between non-contacted base sequences is commonly based on the differential abilities of DNA sequences to allow narrowing of the DNA minor groove. However, the factors that govern the propensity of minor groove narrowing are not completely understood. Here we show that the differential abilities of various DNA sequences to support formation of a highly ordered and stable minor groove solvation network are a key determinant of non-contacted base recognition by a sequence-specific binding protein. In addition, disrupting the solvent network in the non-contacted region of the binding site alters the protein's ability to recognize contacted base sequences at positions 5-6 bases away. This observation suggests that DNA solvent interactions link contacted and non-contacted base recognition by the protein.


Assuntos
Proteínas de Ligação a DNA/química , DNA/química , Sequência de Bases , Sítios de Ligação , DNA/metabolismo , Proteínas de Ligação a DNA/metabolismo , Modelos Moleculares , Conformação de Ácido Nucleico , Regiões Operadoras Genéticas , Ligação Proteica , Proteínas Repressoras/química , Proteínas Repressoras/metabolismo , Proteínas Virais/química , Proteínas Virais/metabolismo
7.
Environ Microbiol ; 16(2): 454-66, 2014 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23981100

RESUMO

Phage-encoded Shiga toxin (Stx) acts as a bacterial defence against the eukaryotic predator Tetrahymena. To function as an effective bacterial anti-predator defence, Stx must kill a broad spectrum of predators. Consistent with that assertion, we show here that bacterially encoded Stx efficiently kills the bacteriovore Acanthamoeba castellanii in co-culture. We also show that, in addition to Stx, the phage-encoded exotoxin, diphtheria toxin (Dtx) expressed by Corynebacterium diphtheriae also can function as part of an anti-predator strategy; it kills Acanthamoeba in co-culture. Interestingly, only exotoxins produced by bacteria internalized by the Acanthamoeba predator are cytolethal; the presence of purified Dtx or Stx in culture medium has no effect on predator viability. This finding is consistent with our results indicating that intoxication of Acanthamoeba by these exotoxins does not require a receptor. Thus bacteria, in the disguise of a food source, function as a 'Trojan Horse', carrying genes encoding an exotoxin into target organisms. This 'Trojan Horse' mechanism of exotoxin delivery into predator cells allows intoxication of predators that lack a cell surface receptor for the particular toxin, allowing bacteria-bearing exotoxins to kill a broader spectrum of predators, increasing the fitness of the otherwise 'defenceless' prey bacteria.


Assuntos
Acanthamoeba castellanii/microbiologia , Antibiose , Corynebacterium diphtheriae/fisiologia , Toxina Shiga/toxicidade , Acanthamoeba castellanii/metabolismo , Bacteriófagos , Técnicas de Cocultura , Meios de Cultura , Toxina Diftérica/toxicidade , Exotoxinas/toxicidade , Fagocitose , Receptores de Superfície Celular
8.
Appl Environ Microbiol ; 79(16): 4821-8, 2013 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-23747699

RESUMO

Water is a major route for infection of humans by exotoxin-producing bacteria, including Shiga toxin-producing Escherichia coli (STEC). While STEC has the potential to be present in nearly every type of water source, its distribution is sporadic, and an understanding of factors that govern its emergence and persistence within water is lacking. In this study, we examined the influence of microbe content on STEC persistence in freshwater. We found that depletion of microbes in the water leads to a considerable increase in the persistence of STEC, an effect that can be mitigated by adding grazing protists to the water. STEC strains appear to be more resistant to the impact of grazing protists than E. coli strains that lack the Shiga toxin (stx) gene. Our results demonstrate that the microcosm can dramatically influence the persistence of STEC in aquatic ecosystems and that the overall impact by microbes on STEC strains is fundamentally different from that of non-STEC strains of bacteria. Overall, these results provide insight into why STEC and possibly other exotoxin-producing bacterial pathogens display such variability in abundance, distribution, and persistence in aquatic ecosystems.


Assuntos
Proteínas de Escherichia coli/genética , Cadeia Alimentar , Água Doce/microbiologia , Toxinas Shiga/genética , Escherichia coli Shiga Toxigênica/fisiologia , Contagem de Colônia Microbiana , Proteínas de Escherichia coli/metabolismo , Pennsylvania , Reação em Cadeia da Polimerase , Toxinas Shiga/metabolismo , Escherichia coli Shiga Toxigênica/genética
9.
Microbiol Spectr ; 11(1): e0293022, 2023 02 14.
Artigo em Inglês | MEDLINE | ID: mdl-36648221

RESUMO

Protozoan predation is a major cause of bacterial mortality. The first step of predation for phagocytic amoebae is the recognition of their prey. Lipopolysaccharide (LPS) is a major component of Gram-negative bacteria and is only present on the outer leaflet of the outer membrane lipid bilayer. LPS consists of three distinct regions: lipid A, an oligosaccharide core, and O-polysaccharide. Previous research in our lab determined that the oligosaccharide (OS) region of LPS mediates the recognition and internalization of Escherichia coli by Acanthamoeba castellanii. The oligosaccharide region is conceptually divided into the inner core and outer core. The LPS of any given E. coli strain contains only one of five different OS structures: K-12 and R1 to R4. All OSs contain the same inner core sugars but different outer core sugars. Here, we show that the Kdo2 moiety of the inner core is necessary and sufficient for E. coli recognition and internalization by A. castellanii. We also show that the precise composition of the variable outer core OS region modulates the efficiency with which A. castellanii consumes bacteria. The latter finding indicates that outer core OS composition plays a role in bacterial defense against phagocytic predators. IMPORTANCE Rather than being transmitted from host to host, most opportunistic bacterial pathogens reside in the environment for significant amounts of time. Protist predation is a major cause of bacterial mortality. To enhance their survival in the environment, bacteria have evolved various defense strategies such as filamentation, increased motility, biofilm formation, toxin release, and modification of cell wall structure; strategies which also enhance their virulence to humans. This work shows that the major component of the bacterial cell wall, LPS, also known as bacterial endotoxin, is a "dual use" factor, regulating amoeba predation of bacteria in addition to its well-known role as a human virulence factor. Both these functions are governed by the same parts of LPS. Thus, the structure and composition of this "dual use" factor likely evolved as a response to constant voracious protist grazing pressure in the environment, rather than during short-term infections of human and animals.


Assuntos
Acanthamoeba castellanii , Escherichia coli , Animais , Humanos , Escherichia coli/fisiologia , Lipopolissacarídeos , Acanthamoeba castellanii/microbiologia , Comportamento Predatório , Oligossacarídeos , Açúcares
10.
Front Oncol ; 12: 933446, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35992795

RESUMO

MDM2 and MDM4 proteins are key negative regulators of tumor suppressor p53. MDM2 and MDM4 interact via their RING domains and form a heterodimer polyubiquitin E3 ligase essential for p53 degradation. MDM4 also forms heterodimer E3 ligases with MDM2 isoforms that lack p53-binding domains, which regulate p53 and MDM4 stability. We are working to identify small-molecule inhibitors targeting the RING domain of MDM2-MDM4 (MMRi) that can inactivate the total oncogenic activity of MDM2-MDM4 heterodimers. Here, we describe the identification and characterization of MMRi62 as an MDM4-degrader and apoptosis inducer in leukemia cells. Biochemically, in our experiments, MMRi62 bound to preformed RING domain heterodimers altered the substrate preference toward MDM4 ubiquitination and promoted MDM2-dependent MDM4 degradation in cells. This MDM4-degrader activity of MMRi62 was found to be associated with potent apoptosis induction in leukemia cells. Interestingly, MMRi62 effectively induced apoptosis in p53 mutant, multidrug-resistant leukemia cells and patient samples in addition to p53 wild-type cells. In contrast, MMRi67 as a RING heterodimer disruptor and an enzymatic inhibitor of the MDM2-MDM4 E3 complex lacked MDM4-degrader activity and failed to induce apoptosis in these cells. In summary, this study identifies MMRi62 as a novel MDM2-MDM4-targeting agent and suggests that small molecules capable of promoting MDM4 degradation may be a viable new approach to killing leukemia cells bearing non-functional p53 by apoptosis.

11.
J Bacteriol ; 193(13): 3313-23, 2011 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-21551291

RESUMO

Our data show that unlike bacteriophage λ, repressor bound at O(L) of bacteriophage 933W has no role in regulation of 933W repressor occupancy of 933W O(R)3 or the transcriptional activity of 933W P(RM). This finding suggests that a cooperative long-range loop between repressor tetramers bound at O(R) and O(L) does not form in bacteriophage 933W. Nonetheless, 933W forms lysogens, and 933W prophage display a threshold response to UV induction similar to related lambdoid phages. Hence, the long-range loop thought to be important for constructing a threshold response in lambdoid bacteriophages is dispensable. The lack of a loop requires bacteriophage 933W to use a novel strategy in regulating its lysis-lysogeny decisions. As part of this strategy, the difference between the repressor concentrations needed to bind O(R)2 and activate 933W P(RM) transcription or bind O(R)3 and repress transcription from P(RM) is <2-fold. Consequently, P(RM) is never fully activated, reaching only ∼25% of the maximum possible level of repressor-dependent activation before repressor-mediated repression occurs. The 933W repressor also apparently does not bind cooperatively to the individual sites in O(R) and O(L). This scenario explains how, in the absence of DNA looping, bacteriophage 933W displays a threshold effect in response to DNA damage and suggests how 933W lysogens behave as "hair triggers" with spontaneous induction occurring to a greater extent in this phage than in other lambdoid phages.


Assuntos
Bacteriólise , Bacteriófagos/fisiologia , Regulação Viral da Expressão Gênica , Lisogenia , Bacteriófagos/genética , Bacteriófagos/crescimento & desenvolvimento , Regiões Operadoras Genéticas , Regiões Promotoras Genéticas , Ligação Proteica , Proteínas Repressoras/metabolismo
12.
J Bacteriol ; 191(16): 5116-22, 2009 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-19502393

RESUMO

Bacterially derived exotoxins kill eukaryotic cells by inactivating factors and/or pathways that are universally conserved among eukaryotic organisms. The genes that encode these exotoxins are commonly found in bacterial viruses (bacteriophages). In the context of mammals, these toxins cause diseases ranging from cholera to diphtheria to enterohemorrhagic diarrhea. Phage-carried exotoxin genes are widespread in the environment and are found with unexpectedly high frequency in regions lacking the presumed mammalian "targets," suggesting that mammals are not the primary targets of these exotoxins. We suggest that such exotoxins may have evolved for the purpose of bacterial antipredator defense. We show here that Tetrahymena thermophila, a bacterivorous predator, is killed when cocultured with bacteria bearing a Shiga toxin (Stx)-encoding temperate bacteriophage. In cocultures with Tetrahymena, the Stx-encoding bacteria display a growth advantage over those that do not produce Stx. Tetrahymena is also killed by purified Stx. Disruption of the gene encoding the StxB subunit or addition of an excess of the nontoxic StxB subunit substantially reduced Stx holotoxin toxicity, suggesting that this subunit mediates intake and/or trafficking of Stx by Tetrahymena. Bacterially mediated Tetrahymena killing was blocked by mutations that prevented the bacterial SOS response (recA mutations) or by enzymes that breakdown H(2)O(2) (catalase), suggesting that the production of H(2)O(2) by Tetrahymena signals its presence to the bacteria, leading to bacteriophage induction and production of Stx.


Assuntos
Viabilidade Microbiana/genética , Toxinas Shiga/farmacologia , Tetrahymena thermophila/efeitos dos fármacos , Tetrahymena thermophila/microbiologia , Animais , Bacteriófagos/genética , Bacteriófagos/metabolismo , Bacteriófagos/fisiologia , Técnicas de Cocultura , Escherichia coli/genética , Escherichia coli/crescimento & desenvolvimento , Escherichia coli/metabolismo , Peróxido de Hidrogênio/metabolismo , Inibidores da Síntese de Proteínas/farmacologia , Toxinas Shiga/genética , Toxinas Shiga/metabolismo , Tetrahymena thermophila/metabolismo
13.
Mycologia ; 101(6): 764-72, 2009.
Artigo em Inglês | MEDLINE | ID: mdl-19927742

RESUMO

The glycosylphosphatidylinositol (GPI) transamidase contains five known subunits and functions in the lumen of the ER to produce GPI-anchored proteins. The transamidase cleaves proteins containing a GPI anchor attachment signal at their C terminus and generates an amide bond between the newly generated carboxyl terminus of the protein and a GPI anchor. We have identified and characterized GPIT-1 and GPIT-2, two of the transamidase subunits from Neurospora crassa. GPIT-1 and GPIT-2 are homologs of the human PIG-T and PIG-U transamidase subunits respectively. We demonstrated that GPIT-2 is required for the addition of GPI anchors onto GPI-anchored proteins. We employed the Neurospora RIP (repeat-induced point mutation) phenomenon to generate 106 "noncritical" amino acid changes in GPIT-1 and 84 "noncritical" amino acid changes in GPIT-2. We used the data to evaluate three-dimensional models for the structures of GPIT-1 and GPIT-2. The mutational data for GPIT-1 is consistent with a multiple-blade propeller structure containing a central channel. The mutational analysis for GPIT-2 supports a structural model based on the karyopherin alpha subunit.


Assuntos
Aciltransferases/metabolismo , Neurospora crassa/enzimologia , Subunidades Proteicas/metabolismo , Aciltransferases/química , Aciltransferases/genética , Substituição de Aminoácidos , Análise Mutacional de DNA , DNA Fúngico/genética , DNA Fúngico/metabolismo , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Genes Bacterianos , Humanos , Inositol/metabolismo , Conformação Molecular , Neurospora crassa/genética , Mutação Puntual , Subunidades Proteicas/química , Subunidades Proteicas/genética , Homologia de Sequência de Aminoácidos
14.
Microbiologyopen ; 8(2): e00636, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-29675935

RESUMO

Temperate phage encoded Shiga toxin (Stx) kills the bacterivorous predator, Tetrahymena thermophila, providing Stx+ Escherichia coli with a survival advantage over Stx- cells. Although bacterial death accompanies Stx release, since bacteria grow clonally the fitness benefits of predator killing accrue to the kin of the sacrificed organism, meaning Stx-mediated protist killing is a form of self-destructive cooperation. We show here that the fitness benefits of Stx production are not restricted to the kin of the phage-encoding bacteria. Instead, nearby "free loading" bacteria, irrespective of their genotype, also reap the benefit of Stx-mediated predator killing. This finding indicates that the phage-borne Stx exotoxin behaves as a public good. Stx is encoded by a mobile phage. We find that Stx-encoding phage can use susceptible bacteria in the population as surrogates to enhance toxin and phage production. Moreover, our findings also demonstrate that engulfment and concentration of Stx-encoding and susceptible Stx- bacteria in the Tetrahymena phagosome enhances the transfer of Stx-encoding temperate phage from the host to the susceptible bacteria. This transfer increases the population of cooperating bacteria within the community. Since these bacteria now encode Stx, the predation-stimulated increase in phage transfer increases the population of toxin encoding bacteria in the environment.


Assuntos
Antibiose , Colífagos/genética , Escherichia coli/crescimento & desenvolvimento , Escherichia coli/virologia , Toxinas Shiga/toxicidade , Tetrahymena thermophila/efeitos dos fármacos , Tetrahymena thermophila/crescimento & desenvolvimento , Interações Microbianas , Toxinas Shiga/genética , Toxinas Shiga/metabolismo
15.
Viruses ; 10(5)2018 04 29.
Artigo em Inglês | MEDLINE | ID: mdl-29710828

RESUMO

Shiga toxin (Stx)-encoding E. coli (STEC) strains are responsible for sporadic outbreaks of food poisoning dating to 1982, when the first STEC strain, E. coli O157:H7, was isolated. Regardless of STEC serotype, the primary symptoms of STEC infections are caused by Stx that is synthesized from genes resident on lambdoid prophage present in STEC. Despite similar etiology, the severity of STEC-mediated disease varies by outbreak. However, it is unclear what modulates the severity of STEC-mediated disease. Stx production and release is controlled by lytic growth of the Stx-encoding bacteriophage, which in turn, is controlled by the phage repressor. Here, we confirm our earlier suggestion that the higher spontaneous induction frequency of Stx-encoding prophage is a consequence, in part, of lower intracellular repressor levels in STEC strains versus non-STEC strains. We also show that this lowered intracellular repressor concentration is a consequence of the utilization of alternative binding/regulatory strategies by the phage repressor. We suggest that a higher spontaneous induction frequency would lead to increased virulence.


Assuntos
Prófagos/genética , Toxina Shiga/genética , Escherichia coli Shiga Toxigênica/virologia , Bacteriófagos/genética , Escherichia coli Shiga Toxigênica/patogenicidade , Transcrição Gênica , Virulência
16.
FEMS Microbiol Ecol ; 93(4)2017 04 01.
Artigo em Inglês | MEDLINE | ID: mdl-28334205

RESUMO

The microbial communities in natural environments such as soil, pond water, or animal rumens are composed of a diverse mixture of bacteria and protozoa including ciliates or flagellates. In such microbiomes, a major source of bacterial mortality is grazing by phagocytic protists. Many protists are omnivorous heterotrophs, feeding on a range of different bacterial species. Due to this indiscriminate feeding, different bacterial species can assemble together in the same phagocytic vesicles where they can potentially exchange genetic material. Here we show that Tetrahymena thermophila imports and accumulates phage donor and recipient bacterial strains in its phagocytic vesicles and that under laboratory conditions the ingested bacteria remain viable for ≥2 h. Prophages in the ingested bacteria induce immediately after ingestion, and the released phages are concentrated in the phagocytic vesicles of the ciliate. These phages retain their ability to infect phage-susceptible bacterial strains. As a consequence of being confined within the phagosome, the frequency of lysogen formation in these vesicles increases 6-fold as compared with the bulk solution. Collectively, these observations suggest that T. thermophila aids in dissemination of bacteriophages by accumulating susceptible bacteria and phages in their phagocytic vesicles.


Assuntos
Bacteriófagos/fisiologia , Animais , Bactérias/genética , Bacteriófagos/genética , Ecologia , Eucariotos , Água Doce , Fagocitose , Tetrahymena thermophila
17.
Toxins (Basel) ; 8(4): 96, 2016 Mar 31.
Artigo em Inglês | MEDLINE | ID: mdl-27043626

RESUMO

Phages 933W, BAA2326, 434, and λ are evolutionarily-related temperate lambdoid phages that infect Escherichia coli. Although these are highly-similar phages, BAA2326 and 933W naturally encode Shiga toxin 2 (Stx⁺), but phage 434 and λ do not (Stx(-)). Previous reports suggest that the 933W Stx⁺ prophage forms less stable lysogens in E. coli than does the Stx(-) prophages λ, P22, and 434. The higher spontaneous induction frequency of the Stx⁺ prophage may be correlated with both virulence and dispersion of the Stx2-encoding phage. Here, we examined the hypothesis that lysogen instability is a common feature of Stx⁺ prophages. We found in both the absence and presence of prophage inducers (DNA damaging agents, salts), the Stx⁺ prophages induce at higher frequencies than do Stx(-) prophages. The observed instability of Stx⁺ prophages does not appear to be the result of any differences in phage development properties between Stx⁺ and Stx(-) phages. Our results indicate that differential stability of Stx⁺ and Stx(-) prophages results from both RecA-dependent and RecA-independent effects on the intracellular concentration of the respective cI repressors.


Assuntos
Bacteriófago lambda/fisiologia , Prófagos/fisiologia , Toxina Shiga II/genética , Bacteriófago lambda/genética , Escherichia coli/virologia , Lisogenia , Prófagos/genética
18.
J Mol Biol ; 340(3): 445-57, 2004 Jul 09.
Artigo em Inglês | MEDLINE | ID: mdl-15210346

RESUMO

The bacteriophage 434 repressor distinguishes between its six naturally occurring binding sites using indirect readout. In indirect readout, sequence-dependent differences in the structure and flexibility of non-contacted bases in a protein's DNA-binding site modulate the affinity of DNA for protein. The conformation and flexibility of a DNA sequence can be influenced by the interaction of the DNA bases or backbone with solution components. We examined the effect of changing the cation-type present in solution on the stability and structure of 434 repressor complexes with wild-type and mutant OR1 and OR3, binding sites that differ in their contacted and non-contacted base sequences. We find that the affinity of repressor for OR1, but not for OR3, depends remarkably on the type and concentration of monovalent cation. Moreover, the formation of a stable, specific repressor-OR1 complex requires the presence of monovalent cations; however, repressor-OR3 complex formation has no such requirement. Changing monovalent cation type alters the ability of repressor to protect OR1, but not OR3, from *OH radical cleavage. Altering the relative length of the poly(dA) x poly(dT) tract in the non-contacted regions of the OR1 and OR3 can reverse the cation sensitivity of repressor's affinities for these two sites. Taken together these findings show that cation-dependent alterations in DNA structure underlies indirect readout of DNA sequence by 434 repressor and perhaps other proteins.


Assuntos
Colífagos/metabolismo , DNA/metabolismo , Proteínas Repressoras/metabolismo , Sequência de Bases , Cátions Monovalentes , DNA/química , DNA/genética , Modelos Moleculares , Dados de Sequência Molecular , Homologia de Sequência do Ácido Nucleico , Proteínas Virais
20.
Viruses ; 5(1): 111-26, 2013 Jan 09.
Artigo em Inglês | MEDLINE | ID: mdl-23303392

RESUMO

In a λ(imm434) lysogen, two proteins are expressed from the integrated prophage. Both are encoded by the same mRNA whose transcription initiates at the P(RM) promoter. One protein is the 434 repressor, needed for the establishment and maintenance of lysogeny. The other is Hex which is translated from an open reading frame that apparently partially overlaps the 434 repressor coding region. In the wild type host, disruption of the gene encoding Hex destabilizes λ(imm434) lysogens. However, the hex mutation has no effect on lysogen stability in a recA(-) host. These observations suggest that Hex functions by modulating the ability of RecA to stimulate 434 repressor autocleavage. We tested this hypothesis by identifying and purifying Hex to determine if this protein inhibited RecA­stimulated autocleavage of 434 repressor in vitro. Our results show that in vitro a fragment of Hex prevents RecA-stimulated autocleavage of 434 repressor, as well as the repressors of the closely related phage P22. Surprisingly, Hex does not prevent RecA­stimulated autocleavage of phage lambda repressor, nor the E. coli LexA repressor.


Assuntos
Bacteriófago lambda/metabolismo , Proteínas de Escherichia coli/metabolismo , Escherichia coli/enzimologia , Escherichia coli/virologia , Recombinases Rec A/metabolismo , Proteínas Repressoras/metabolismo , Proteínas Virais Reguladoras e Acessórias/metabolismo , Bacteriófago lambda/genética , Escherichia coli/genética , Proteínas de Escherichia coli/genética , Interações Hospedeiro-Patógeno , Lisogenia , Processamento de Proteína Pós-Traducional , Recombinases Rec A/genética , Proteínas Repressoras/genética , Proteínas Virais Reguladoras e Acessórias/genética
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