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1.
Osteoporos Int ; 32(2): 363-375, 2021 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-32885317

RESUMO

The incidence of localized periosteal thickening (LPT, also termed beaking) of the lateral cortex that often precedes an atypical femoral fracture (AFF) was not high in patients with rheumatoid arthritis (RA) but incomplete AFFs developed in two patients. Higher-dose prednisolone was a significant risk factor for LPT in patients with RA. INTRODUCTION: Atypical femoral fractures (AFFs) are stress fractures; bisphosphonate (BP) use is a major risk factor for the development of such fractures. Localized periosteal thickening (LPT, also termed beaking) of the lateral cortex often precedes a complete or incomplete AFF. We evaluated the incidence of latent LPT in patients with rheumatoid arthritis (RA), to evaluate LPT progression, and to define LPT risk factors. METHODS: A total of 254 patients with RA were included; all underwent annual X-ray evaluation, dual-energy X-ray absorptiometry, and analyses of serum and bone metabolic markers for 2-3 years. LPT of the lateral cortex was sought in femoral X-rays. RESULTS: The incidence of LPT was 2.4% (6/254). Among patients on both BP and prednisolone (PSL) at enrollment, the incidence was 2.3% (3/131). Two femurs of two patients with LPT developed incomplete AFFs; LPT was extensive and associated with endosteal thickening. One patient had been on BP and PSL and microscopic polyangiitis was comorbidity. The other was on a selective estrogen receptor modulator and PSL. A daily PSL dose >5 mg (OR 11.4; 95%CI 2.15-60.2; p = 0.004) and higher-dose methotrexate (OR 1.22; 95%CI 1.01-1.49; p = 0.043) were significant risk factors for LPT. CONCLUSIONS: The incidence of latent LPT was not high (2.4%) but incomplete AFFs developed in two RA patients. Higher-dose PSL because of a comorbid disease requiring glucocorticoid treatment other than RA or refractory RA were risk factors for LPT; X-ray screening for latent LPT would usefully prevent complete AFFs.


Assuntos
Artrite Reumatoide , Conservadores da Densidade Óssea , Fraturas do Fêmur , Artrite Reumatoide/complicações , Artrite Reumatoide/tratamento farmacológico , Artrite Reumatoide/epidemiologia , Difosfonatos , Fraturas do Fêmur/induzido quimicamente , Fraturas do Fêmur/diagnóstico por imagem , Fraturas do Fêmur/epidemiologia , Fêmur , Humanos , Incidência
2.
Biochem Biophys Res Commun ; 503(2): 1141-1147, 2018 09 05.
Artigo em Inglês | MEDLINE | ID: mdl-29944883

RESUMO

This paper reports isolation of two monoclonal antibodies (mAbs) that bind to both a membrane protein and a cytoplasmic protein. Most Abs established as markers for autoimmune disease bind to cytoplasmic or nuclear substances. However, it remains unknown how these Abs are produced. On the other hand, there were examples where clones originally isolated as Abs that bind to membrane proteins also showed binding activity to cytoplasmic or nuclear substances. Based on these results, the following hypothesis has been proposed. The Abs that had been originally produced against a membrane protein showed cross-reactivity against cytoplasmic or nuclear substances. In the present study we reported isolation of Abs that bound to both a membrane protein, CADM1, and a cytoplasmic protein, α-actinin-4. The method adopted in the present study could be generally applicable to isolation of Abs showing such dual specificity. Firstly, we constructed a huge human Ab library using various organs including naïve B-cell-rich organs such as bone marrow and umbilical cords. Then, we developed a comprehensive screening method for isolation of Abs that bound to cell surface antigens. Through extensive screenings with many kinds of cell we newly obtained a library composed of around 4000 independent clones that bind to membrane proteins. We screened this library with α-actinin-4 and succeeded in isolating two Abs. They bound to α-actinin-4 and a membrane protein CADM1. Furthermore, they are encoded by naïve heavy and light chain variable genes (VH & VL). These results suggested that cross-reactive Abs to both a membrane protein and a cytoplasmic protein could be present in germline repertoire of Ab in humans. This methodology adopted in the present study could be applied to isolation of cross-reactive Abs possibly involved in autoimmune diseases.


Assuntos
Actinina/imunologia , Anticorpos Monoclonais/imunologia , Molécula 1 de Adesão Celular/imunologia , Sequência de Aminoácidos , Anticorpos Monoclonais/química , Anticorpos Monoclonais/genética , Linhagem Celular , Reações Cruzadas , Células Hep G2 , Humanos , Região Variável de Imunoglobulina/química , Região Variável de Imunoglobulina/genética , Região Variável de Imunoglobulina/imunologia , Imunoprecipitação
3.
Int J Sports Med ; 36(8): 666-71, 2015 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-25958945

RESUMO

We investigated the effect of a training program consisting of planned overreaching and subsequent short-term detraining on sprint performance. 24 physically active men participated in an 18-day sprint-training program. They were divided into 2 groups: the overreaching-detraining (OR-DT) and the control (CON) groups. Subjects in the OR-DT group performed 12 consecutive days of maximal cycle sprint training followed by 6 days of detraining, whereas a rest day was provided after every 2 successive training days for the CON group. Peak power output during maximal pedaling increased significantly after 6 days of detraining in the OR-DT group compared with the baseline (P<0.05), whereas no change was observed in CON group. Intramuscular phosphocreatine concentration increased significantly after 12 days of daily training in the OR-DT group (69.3±45.8% increase vs. baseline, P<0.05), and it was maintained after the detraining period (46.6±33.6% increase vs. baseline, P<0.05). However, no change was observed in CON group. No significant changes in blood variables were observed after the training period except significant reduction of serum cortisol in the CON group. Daily sprint training and subsequent short-term detraining enhanced peak power output after the detraining period.


Assuntos
Desempenho Atlético/fisiologia , Ciclismo/fisiologia , Adaptação Fisiológica/fisiologia , Adulto , Limiar Anaeróbio/fisiologia , Biomarcadores/metabolismo , Humanos , Espectroscopia de Ressonância Magnética , Masculino , Consumo de Oxigênio/fisiologia , Fosfocreatina/metabolismo , Descanso/fisiologia
4.
Pharmazie ; 69(3): 192-7, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-24716408

RESUMO

It has been reported that losartan, an angiotensin II receptor blocker, alters the circadian rhythm of melatonin secretion and significantly reduces melatonin production. However, this finding has been confirmed at the animal experiment level only, and there are no reports of studies in humans. Therefore, we performed this study to confirm the reproducibility of the aforementioned findings of animal experiments in humans. Ten male subjects who were in good general health and free from any medical condition were recruited for this study. After a preliminary observation period of 7 days, the subjects received oral losartan treatment, 50 mg daily for 7 days. Blood samplings for measurement of the plasma melatonin concentrations were performed on day 7 of the preliminary observation period and day 7 of the losartan treatment period. The circadian rhythm of melatonin secretion after the 7-day treatment with losartan showed no significant difference from that recorded before the losartan administration. The significant decrease of the home blood pressure was observed on the afternoons. The blood samples showed significant decrease of the serum sodium and uric acid levels, along with a significant increase of the serum potassium level. The pharmacological actions of losartan at the ordinarily used clinical dose level were confirmed in humans, however, no significant inhibitory effect of the drug on melatonin secretion could be confirmed. These results are expected to be useful for guiding the proper use of angiotensin II receptor blockers.


Assuntos
Bloqueadores do Receptor Tipo 1 de Angiotensina II/farmacologia , Ritmo Circadiano/efeitos dos fármacos , Losartan/farmacologia , Melatonina/metabolismo , Adulto , Contagem de Células Sanguíneas , Pressão Sanguínea/efeitos dos fármacos , Feminino , Humanos , Masculino , Sódio/sangue , Ácido Úrico/sangue , Adulto Jovem
5.
J Exp Med ; 155(1): 201-18, 1982 Jan 01.
Artigo em Inglês | MEDLINE | ID: mdl-6798155

RESUMO

We have identified, cloned, and sequenced eight different DNA segments encoding the diversity (D) regions of mouse immunoglobulin heavy-chain genes. Like the two D segments previously characterized (16, 17), all eight D segments are flanked by characteristic heptamers and nonamers separated by 12-bp spacers. These 10 D segments, and several more D segments identified but not yet sequenced, can be classified into three families based on the extent of sequence homology. The SP2 family consists of nine highly homologous D segments that are all 17-bp long and clustered in a chromosomal region of approximately 60 kb. The FL16 family consists of up to four D segments, two of which were mapped in the 5' end region of the SP2-D cluster. The two FL16D segments are 23 and 17 bp long. The third, the Q52 family, is a single-member family of the 10-bp-long DQ52, located 700 bp 5' to the JH cluster. We argue that the D-region sequences of the majority of heavy chain genes arise from these germline D segments by various somatic mechanisms, including joining of multiple D segments. We present a specific model of D-D joining that does not violate the 12/23-bp spacer rule.


Assuntos
DNA/imunologia , Cadeias Pesadas de Imunoglobulinas/genética , Sequência de Aminoácidos , Animais , Fenômenos Químicos , Química , Clonagem Molecular , DNA/genética , Hibridização Genética , Camundongos , Mieloma Múltiplo/genética , Nucleotídeos , Recombinação Genética
6.
Am J Transplant ; 10(1): 40-6, 2010 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19889124

RESUMO

The programmed death-1 (PD-1)/B7-H1 pathway acts as an important negative regulator of immune responses. We herein investigated the role of the PD-1/B7-H1 pathway in establishing an immunological spontaneous tolerance status in mouse liver allografting. B7-H1 is highly expressed on the donor-derived tissue cells and it is also associated with the apoptosis of infiltrating T cells in the allografts. Strikingly, a blockade of the PD-1/B7-H1 pathway via anti-B7-H1mAb or using B7-H1 knockout mice as a donor led to severe cell infiltration as well as hemorrhaging and necrosis, thus resulting in mortality within 12 days. Furthermore, the expression of the FasL, perforin, granzyme B, iNOS and OPN mRNA in the liver allografts increased in the antibody-treated group in comparison to the controls. Taken together, these data revealed that the B7-H1 upregulation on the tissue cells of liver allografts thus plays an important role in the apoptosis of infiltrating cells, which might play a critical role of the induction of the spontaneous tolerance after hepatic transplantation in mice.


Assuntos
Antígenos de Superfície/imunologia , Proteínas Reguladoras de Apoptose/imunologia , Antígeno B7-1/imunologia , Transplante de Fígado/imunologia , Glicoproteínas de Membrana/imunologia , Peptídeos/imunologia , Animais , Anticorpos Monoclonais/administração & dosagem , Apoptose , Proteínas Reguladoras de Apoptose/antagonistas & inibidores , Antígeno B7-1/genética , Antígeno B7-H1 , Rejeição de Enxerto/imunologia , Rejeição de Enxerto/patologia , Sobrevivência de Enxerto/imunologia , Tolerância Imunológica , Transplante de Fígado/patologia , Masculino , Glicoproteínas de Membrana/antagonistas & inibidores , Glicoproteínas de Membrana/deficiência , Glicoproteínas de Membrana/genética , Camundongos , Camundongos Endogâmicos C3H , Camundongos Endogâmicos C57BL , Camundongos Knockout , Peptídeos/antagonistas & inibidores , Peptídeos/deficiência , Peptídeos/genética , Receptor de Morte Celular Programada 1 , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Linfócitos T/imunologia , Linfócitos T/patologia , Quimeras de Transplante/imunologia , Transplante Homólogo
7.
Science ; 269(5224): 693-5, 1995 Aug 04.
Artigo em Inglês | MEDLINE | ID: mdl-7624800

RESUMO

By presenting antigenic peptides to T lymphocytes, major histocompatibility complex (MHC) class I molecules play important roles in the human immune system. Knowledge is limited on the evolutionary history of human MHC class I-related molecules. An expressed class I gene, MR1, has now been identified on human chromosome 1q25, outside the MHC. In contrast to other known human divergent class I genes, MR1 encodes peptide-binding domains similar to those encoded by human leukocyte antigen (HLA) class I genes on chromosome 6 and by nonmammalian classical MHC class I genes. This gene may thus contribute to understanding the evolution of the MHC.


Assuntos
Cromossomos Humanos Par 1 , Genes MHC Classe I , Antígenos de Histocompatibilidade Classe I/genética , Complexo Principal de Histocompatibilidade , Sequência de Aminoácidos , Animais , Sequência de Bases , Evolução Biológica , Mapeamento Cromossômico , Cromossomos Humanos Par 6 , Antígenos de Histocompatibilidade Classe I/química , Humanos , Antígenos de Histocompatibilidade Menor , Dados de Sequência Molecular
8.
Neuron ; 6(4): 583-94, 1991 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-1673055

RESUMO

Transgenic mice carrying multiple copies of the human tyrosine hydroxylase (TH) gene have been produced. The transgenes were transcribed correctly and expressed specifically in brain and adrenal gland. The level of human TH mRNA in brain was about 50-fold higher than that of endogenous mouse TH mRNA. In situ hybridization demonstrated an enormous region-specific expression of the transgene in substantia nigra and ventral tegmental area. TH immunoreactivity in these regions, though not comparable to the increment of the mRNA, was definitely increased in transgenic mice. This observation was also supported by Western blot analysis and TH activity measurements. However, catecholamine levels in transgenics were not significantly different from those in nontransgenics. These results suggest unknown regulatory mechanisms for human TH gene expression and for the catecholamine levels in transgenic mice.


Assuntos
Regulação da Expressão Gênica , Camundongos Transgênicos/fisiologia , Tirosina 3-Mono-Oxigenase/genética , Glândulas Suprarrenais/metabolismo , Animais , Encéfalo/metabolismo , Catecolaminas/metabolismo , Humanos , Imuno-Histoquímica , Camundongos , Hibridização de Ácido Nucleico , RNA Mensageiro/metabolismo , Transcrição Gênica
9.
J Clin Invest ; 85(6): 1722-7, 1990 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-2347911

RESUMO

We established a transformed B cell line expressing both IgM and IgG on the cell surface from a patient with hyper IgM immunodeficiency using Epstein-Barr viruses. DNA and RNA of the cells were analyzed. DNA rearrangements of Ig JH gene loci were observed on both chromosomes. Cloning and DNA sequence analyses showed that one has a VHDHJH structure while the other has a DHJH structure. Southern hybridization with 5'-S mu and S gamma region-containing probes indicated germline configuration in the switch regions of mu and gamma genes on both chromosomes. To test expression of mu and gamma chains in the transformed cells at the mRNA-level, we used the polymerase chain reaction with three kinds of synthetic oligonucleotides as primers, one of which was part of the VH gene, while the other two were complementary to parts of C mu and C gamma genes. Sequence analysis of the amplified products showed that the same VHDHJH sequence is directly connected with either the C mu or the C gamma sequence in the mRNAs. This is direct evidence showing that in double isotype-bearing cells one VHDHJH exon in the transcript is alternatively spliced to C mu or C gamma without DNA rearrangement. The defect in this disease could be at the S-S recombination stage.


Assuntos
Rearranjo Gênico de Cadeia Pesada de Linfócito B , Imunoglobulina G/metabolismo , Imunoglobulina M/deficiência , Imunoglobulina M/metabolismo , Síndromes de Imunodeficiência/genética , Sequência de Aminoácidos , Sequência de Bases , Southern Blotting , Linhagem Celular , Genes de Troca , Humanos , Isotipos de Imunoglobulinas/metabolismo , Síndromes de Imunodeficiência/metabolismo , Dados de Sequência Molecular , Reação em Cadeia da Polimerase , Splicing de RNA , Recombinação Genética , Mapeamento por Restrição
10.
Cancer Res ; 50(11): 3167-71, 1990 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-1970754

RESUMO

In an effort to devise an effective treatment for human drug-resistant cancers, we have generated a monoclonal antibody, MRK16, reactive to the multidrug transporter P-glycoprotein. The monoclonal antibody inhibited the growth of human drug-resistant tumor cells in a xenograft model, suggesting its potential usefulness in the immunotherapy of drug-resistant cancers. In this study, we have developed a recombinant chimeric antibody in which the antigen-recognizing variable regions of MRK16 are joined with the constant regions of human antibodies. When human effector cells were used, the chimeric antibody, MH162, was more effective in killing drug-resistant tumor cells than the all-mouse monoclonal MRK16. The chimeric antibody against the multidrug transporter P-glycoprotein will be a useful agent in immunotherapy of human drug-resistant cancers.


Assuntos
Anticorpos Monoclonais/imunologia , Imunoglobulina G/imunologia , Glicoproteínas de Membrana/imunologia , Transfecção/imunologia , Membro 1 da Subfamília B de Cassetes de Ligação de ATP , Animais , Citotoxicidade Celular Dependente de Anticorpos/imunologia , Resistência a Medicamentos , Humanos , Cadeias Pesadas de Imunoglobulinas , Cadeias Leves de Imunoglobulina , Camundongos , Mieloma Múltiplo/genética , Mieloma Múltiplo/imunologia , Proteínas Recombinantes/imunologia
11.
Oncogene ; 11(12): 2705-10, 1995 Dec 21.
Artigo em Inglês | MEDLINE | ID: mdl-8545129

RESUMO

In a previous paper (Proc. Natl. Acad. Sci. USA 84, 4264, 1987) we reported that a DNA fragment containing a gene for the T-cell receptor beta chain, which had been excised from chromosome 7q35 during D beta-J beta joining, was inserted into chromosome 6p21.3 in a patient with acute T-cell leukemia. We have since screened for genes in the vicinity of the insertion point and have identified a gene that is equivalent to the murine TIS11d gene, a member of TIS11 early response gene family, that contains unique Cysteine-Histidine motifs. The human TIS11d gene consists of two exons and encodes a polypeptide of 492 amino acids. The insertion of the DNA fragment observed in this patient is located at the carboxy-terminal portion of the TIS11d protein.


Assuntos
Proteínas de Ligação a DNA , Proteínas Imediatamente Precoces , Leucemia-Linfoma de Células T do Adulto/genética , Proteínas/genética , Receptores de Antígenos de Linfócitos T alfa-beta/genética , Sequência de Aminoácidos , Animais , Sequência de Bases , Cromossomos Humanos Par 6 , Sequência Conservada , Rearranjo Gênico , Humanos , Camundongos , Dados de Sequência Molecular , Proteínas/química , RNA Mensageiro/análise , Tristetraprolina
12.
J Mol Biol ; 248(4): 729-32, 1995 May 12.
Artigo em Inglês | MEDLINE | ID: mdl-7752235

RESUMO

Effects of mutations on antigen-antibody interactions were energetically examined using several kinds of Fv fragments, derivatives of a monoclonal antibody, D1.3, that is specific for hen egg-white lysozyme. According to the transition-state theory, the thermodynamic parameters involved in pre and post-processes of formation of the activated complex were estimated separately. In the pre-process, there is a strong compensation between changes in entropy and changes in enthalpy caused by substitutions of amino acid residues. Thus, the differences in the association constant (KA) caused by mutations are not related to the pre-process but to the post-process.


Assuntos
Reações Antígeno-Anticorpo , Fragmentos de Imunoglobulinas/metabolismo , Mutação , Animais , Galinhas , Fragmentos de Imunoglobulinas/genética , Cinética , Muramidase/metabolismo , Termodinâmica
13.
Mol Immunol ; 30(5): 461-7, 1993 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-8464428

RESUMO

The nucleotide sequence of a 4621 base pair fragment of DNA, from a position upstream of DSQ52 to the S mu region within immunoglobulin heavy-chain gene loci of Suncus murinus was determined. The sequence contained one D gene, three JH genes and an enhancer. Suncus murinus is an insectivore and is one of the most primitive mammals. Both primates and rodents are thought to have originated from insectivores and to have evolved separately. We also determined the nucleotide sequence of a region between human JH genes and the enhancer which has not previously been reported. Thus, the sequences of the entire region from each of the three species, Suncus murinus, human and mouse are now available. Comparison of the nucleotide sequence of this region between these three species indicated that D and JH genes, consisting of coding and signal regions, are highly conserved. Moreover, although extensive sequence homology in the region between JH and S mu was observed between mouse and human, only core portions of the enhancer region of Suncus murinus exhibited homology to those of mouse and human. Sequence conservation of JH genes in Suncus murinus, mouse and human was observed not only at the amino-acid level, but also at the nucleotide level, including the third letters of the codons. It is suggested that JH genes may play a role in the metabolism of the DNA and/or RNA.


Assuntos
Genes de Imunoglobulinas , Cadeias Pesadas de Imunoglobulinas/genética , Região de Junção de Imunoglobulinas/genética , Cadeias mu de Imunoglobulina/genética , Algoritmos , Animais , Sequência de Bases , Mapeamento Cromossômico , Simulação por Computador , DNA/química , Elementos Facilitadores Genéticos/genética , Humanos , Camundongos , Dados de Sequência Molecular , Homologia de Sequência do Ácido Nucleico , Musaranhos
14.
Mol Immunol ; 28(10): 1063-72, 1991 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-1922102

RESUMO

The variable region nucleotide sequences of seven monoclonal anti-steroid antibodies that are specific for the closely related progesterone derivative, 11-deoxycortisol or 17 alpha-hydroxyprogesterone (17-OHP), have been determined by genomic cloning and DNA-sequencing or by direct mRNA-sequencing. As for their heavy chain variable regions, the nucleotide sequences of the SCET.M8.1 (SCET) and OHP 4B2.2.1 (4B2) antibodies were classified into the VH-9 family, while OHP 7D7.2.3 (7D7), 1E9.3.1 (1E9), 57.G6.1 (57) and 138.H8.1 (138) used VH-3 family genes. OHP 101.B11.1 (101) used a gene of the VH-1 family. For their light chain variable regions, SCET and 57 used VK-28 group genes, while 4B2, 7D7, 1E9, 101 and 138 antibodies used genes of the VK-21 subgroups (21A, 21B or 21C). All of the antibodies used different combinations of genes in the VH families and VK groups or subgroups. This indicates that the antibody response against the steroid hapten, 17-OHP, is fairly polyclonal, and several VH/VL combinations show high affinity for progesterone-related steroids. Although the primary structures of hypervariable loop regions of the mAbs were relatively diverse, generally, hydrophobic and aromatic amino acids were rich in these regions. Moreover, the length of heavy chain CDR3 was constant in all the antibodies investigated in this paper as well as the previously reported anti-progesterone monoclonal antibodies (mAbs). This suggests that the length of VH CDR3 in these mAbs has a considerable influence on the formation of antigen-combining pockets. The pH-reactivity profiles for the anti-17-OHP mAbs indicated that the the steroid-mAb binding was independent of pH between pH 4 and 11 in most of the mAbs. The results suggest that the steroid-mAb interactions are not largely affected by the electrostatic environments near the combining sites of these mAbs. Taken together, these data imply that the shape of hydrophobic depressions in the combining sites is important for the binding of relatively large, hydrophobic and rigid haptens like steroids.


Assuntos
Anticorpos Monoclonais/genética , Cortodoxona/imunologia , Hidroxiprogesteronas/imunologia , 17-alfa-Hidroxiprogesterona , Sequência de Aminoácidos , Animais , Afinidade de Anticorpos , Diversidade de Anticorpos , Sequência de Bases , Genes de Imunoglobulinas , Concentração de Íons de Hidrogênio , Cadeias Pesadas de Imunoglobulinas/genética , Região Variável de Imunoglobulina/genética , Cadeias kappa de Imunoglobulina/genética , Camundongos , Dados de Sequência Molecular , Oligonucleotídeos/química , RNA Mensageiro/genética , Mapeamento por Restrição
15.
Gene ; 129(1): 135-9, 1993 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-8335252

RESUMO

We measured the frequencies of recombination in a yeast host between two homologous segments of DNA that had been inserted with the same polarity in a yeast artificial chromosome (YAC) vector. Three kinds of YAC clones were constructed in which the gene encoding neomycin(Nm) resistance was sandwiched between two homologous segments of DNA, such as the IS3 elements of Escherichia coli or human Alu sequences. Frequencies of homologous recombination in yeast were measured in terms of loss of resistance to Nm. In the case of IS3 fragments, homologous recombination between them did occur at a relatively high frequency (5 x 10(-4). In contrast, recombination between two Alu sequences did not occur at a detectable level during a 30-day incubation. Thus, the frequency was less than 10(-5). These results indicate that the Alu sequences do not sufficiently promote the frequency of recombination between two homologous fragments in yeast as to induce rearrangements of DNA in a substantial fraction of YAC clones in libraries.


Assuntos
Cromossomos Fúngicos , Vetores Genéticos , Recombinação Genética , Saccharomyces cerevisiae/genética , Sequência de Bases , DNA Fúngico/genética , DNA Recombinante , Dados de Sequência Molecular , Oligodesoxirribonucleotídeos/química , Mapeamento por Restrição , Homologia de Sequência do Ácido Nucleico
16.
Gene ; 130(1): 153-4, 1993 Aug 16.
Artigo em Inglês | MEDLINE | ID: mdl-8344524

RESUMO

More than half of the products of PCR contain an extra A residue at the 3' end, which is the result of the template-independent activity of Taq polymerase. To facilitate cloning of the products of PCR without modification, T vectors, which have a single overhanging T residue at the 3' end, have been developed. In the present study, we constructed new T vectors which can be prepared in the laboratory by simple digestion with the restriction enzymes AspEI or Eam1 105I.


Assuntos
Clonagem Molecular/métodos , Vetores Genéticos , Reação em Cadeia da Polimerase , Sequência de Aminoácidos , Sequência de Bases , Desoxirribonucleases de Sítio Específico do Tipo II , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Timina
17.
Gene ; 118(1): 87-91, 1992 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-1511888

RESUMO

For unknown reasons, levels of expression of foreign genes inserted into expression vectors in Escherichia coli have frequently been undetectable. The most critical step in the successful production of foreign proteins seems to be the initiation of translation. Since most prokaryotic genes are transcribed in a polycistronic form, we have devised a new prokaryotic expression system utilizing dicistronic gene organization. Downstream from a strong promoter and the gene encoding glutathione S-transferase from Schistosoma japonicum, various foreign genes were connected via a ribosome-binding site, a stop codon and a start codon. The VH domain of an immunoglobulin fused to the alpha subunit of tryptophan synthase, FK506-binding protein, cyclophilin, and a domain of a major histocompatibility complex antigen were successfully produced in E. coli as discrete polypeptides by this method.


Assuntos
Clonagem Molecular/métodos , Escherichia coli/genética , Vetores Genéticos/genética , Proteínas Recombinantes/biossíntese , Isomerases de Aminoácido/biossíntese , Isomerases de Aminoácido/efeitos dos fármacos , Isomerases de Aminoácido/genética , Sequência de Aminoácidos , Animais , Sequência de Bases , Proteínas de Transporte/biossíntese , Proteínas de Transporte/efeitos dos fármacos , Proteínas de Transporte/genética , Genes , Genes de Imunoglobulinas , Glutationa Transferase/biossíntese , Glutationa Transferase/genética , Glutationa Transferase/metabolismo , Região Variável de Imunoglobulina/biossíntese , Região Variável de Imunoglobulina/efeitos dos fármacos , Região Variável de Imunoglobulina/genética , Complexo Principal de Histocompatibilidade/genética , Dados de Sequência Molecular , Peptidilprolil Isomerase , Proteínas Recombinantes/metabolismo , Sequências Reguladoras de Ácido Nucleico/genética , Schistosoma japonicum/enzimologia , Schistosoma japonicum/genética , Proteínas de Ligação a Tacrolimo , Triptofano Sintase/biossíntese , Triptofano Sintase/genética , Triptofano Sintase/metabolismo
18.
Gene ; 102(1): 67-70, 1991 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-1864511

RESUMO

A simple and fast method for introducing a series of mutations in cloned DNA has been developed. The polymerase chain reaction (PCR) has been used for site-directed mutagenesis. Because mutations can be introduced only within the primer sequences used for PCR, a suitable restriction site in the vicinity of the mutated nucleotide is required to permit recloning. Several methods have been devised to overcome this limitation. Our present method is a modification of the overlap extension method [Ho et al., Gene 77 (1989) 51-57], and has some advantages over this and other published methods. In our method, three common primers and a series of primers specific for various mutations are chemically synthesized. Once the proper oligodeoxyribonucleotides are selected as common primers, each mutation requires only one additional primer. Therefore, this method is very useful for introducing many mutations in various sites of the target DNA. We describe our protocol for the site-directed mutagenesis and an example of the introduction of several mutations in the hen egg-white lysozyme-encoding gene.


Assuntos
Muramidase/genética , Mutagênese Sítio-Dirigida , Reação em Cadeia da Polimerase/métodos , Animais , Sequência de Bases , Galinhas , Clonagem Molecular , DNA de Cadeia Simples/genética , Dados de Sequência Molecular
19.
Gene ; 194(1): 35-46, 1997 Jul 18.
Artigo em Inglês | MEDLINE | ID: mdl-9266670

RESUMO

We prepared three kinds of phagemid vector that permit the simultaneous introduction of highly diverged sequences into six complementarity-determining regions (CDRs) of an antibody (Ab) by the polymerase chain reaction (PCR) with degenerate oligodeoxynucleotide (oligo) primers. The phages expressed either the Fv, single-chain Fv (sc Fv) or Fab form of an Ab fused with a half-molecule of cpIII on the surface of M13 phage. A phage-display library, composed of 2 x 10(8) independent clones, was constructed; the phages that were specific for hen egg-white lysozyme (HEL) were selected by three rounds of panning; and 20 clones were isolated. The isolated clones consisted of 17 different clones. Among them, 16 clones expressed proteins that were able to bind to HEL. The association constants for binding of the encoded proteins to HEL ranged from 1.48 x 10(6) to 7.71 x 10(6)/M. These vectors allowed us to prepare many libraries of artificial Ab in which the sequences of six CDRs were very different and reflected the artificial sequences that had been designed for the degenerate oligo that we used as primers for PCR. The libraries should be also useful for the analysis of relationships between the sequences of the CDRs and antigen (Ag) specificity.


Assuntos
Anticorpos/química , Vetores Genéticos , Fragmentos Fab das Imunoglobulinas/química , Região Variável de Imunoglobulina/química , Muramidase/imunologia , Sequência de Aminoácidos , Animais , Especificidade de Anticorpos , Bacteriófago M13 , Sequência de Bases , Calorimetria , Galinhas , Clonagem Molecular , Primers do DNA , Fragmentos Fab das Imunoglobulinas/biossíntese , Região Variável de Imunoglobulina/biossíntese , Dados de Sequência Molecular , Mutagênese Insercional , Mutagênese Sítio-Dirigida , Biblioteca de Peptídeos , Reação em Cadeia da Polimerase , Proteínas Recombinantes de Fusão/biossíntese , Proteínas Recombinantes de Fusão/química , Mapeamento por Restrição , Alinhamento de Sequência
20.
Gene ; 107(1): 27-35, 1991 Oct 30.
Artigo em Inglês | MEDLINE | ID: mdl-1660429

RESUMO

Long-range physical mapping with rare-cutting restriction enzymes (rare cutters) is an important step for structural analysis of complex genomes. Combination of two types of DNA clones bearing the rare-cutter sites, linking clones and jumping clones (Fig. 1a), facilitates the physical mapping [Poustka et al., Nature 325 (1987) 353-355]. A step followed by the physical mapping is the cloning of the large (rare-cutter-generated) restriction fragment of interest. For facilitating this step, we devised a method to directly clone a long restriction fragment without constructing the whole genomic DNA library using the jumping clone as starting material. The short DNA segments of a jumping clone, which are derived from the 5' and 3' terminal regions of the large restriction fragment, are inserted into the yeast artificial chromosome plasmid (pYAC) vector, and then converted into single strands with T7 gene 6-encoded 5'----3' exonuclease. The total genomic DNA digested with the restriction enzyme is also treated with the exonuclease to convert the terminal regions of the restriction fragments into single strands. In the resulting products, only the fragment corresponding to the jumping clone can form hybrids with the just-mentioned, single-stranded DNAs, which are connected to the pYAC, and only this fragment is cloned in yeast. We describe the protocol of this method with Escherichia coli DNA as a model experiment. Judging from the cloning efficiency, this method could be applied to cloning single-copy regions of the human genome, provided a jumping clone is available. The instability of inserts in the pYAC vector is also discussed.


Assuntos
Cromossomos Fúngicos , Clonagem Molecular/métodos , Escherichia coli/genética , Vetores Genéticos/genética , Sequência de Bases , Elementos de DNA Transponíveis/genética , DNA Bacteriano/metabolismo , DNA de Cadeia Simples/genética , Exodesoxirribonucleases/metabolismo , Dados de Sequência Molecular , Plasmídeos/genética , Mapeamento por Restrição , Fagos T/enzimologia
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