Individual and combined impacts of carbon dioxide enrichment, heatwaves, flow velocity variability, and fine sediment deposition on stream invertebrate communities.

Climate change and land-use change are widely altering freshwater ecosystem functioning and there is an urgent need to understand how these broad stressor categories may interact in future. While much research has focused on mean temperature increases, climate change also involves increasing variability of both water temperature and flow regimes and increasing concentrations of atmospheric CO2, all with potential to alter stream invertebrate communities. Deposited fine sediment is a pervasive land-use stressor with widespread impacts on stream invertebrates. Sedimentation may be managed at the catchment scale; thus, uncovering interactions with these three key climate stressors may assist mitigation of future threats. This is the first experiment to investigate the individual and combined effects of enriched CO2, heatwaves, flow velocity variability, and fine sediment on realistic stream invertebrate communities. Using 128 mesocosms simulating small stony-bottomed streams in a 7-week experiment, we manipulated dissolved CO2 (ambient; enriched), fine sediment (no sediment; 300 g dry sediment), temperature (ambient; two 7-day heatwaves), and flow velocity (constant; variable). All treatments changed community composition. CO2 enrichment reduced abundances of Orthocladiinae and Chironominae and increased Copepoda abundance. Variable flow velocity had only positive effects on invertebrate abundances (7 of 13 common taxa and total abundance), in contrast to previous experiments showing negative impacts of reduced velocity. CO2 was implicated in most stressor interactions found, with CO2 × sediment interactions being most common. Communities forming under enriched CO2 conditions in sediment-impacted mesocosms had ~20% fewer total invertebrates than those with either treatment alone. Copepoda abundances doubled in CO2-enriched mesocosms without sediment, whereas no CO2 effect occurred in mesocosms with sediment. Our findings provide new insights into potential future impacts of climate change and land use in running freshwaters, in particular highlighting the potential for elevated CO2 to interact with fine sediment deposition in unpredictable ways.

High-throughput amplicon sequencing and stream benthic bacteria: identifying the best taxonomic level for multiple-stressor research.

Disentangling the individual and interactive effects of multiple stressors on microbial communities is a key challenge to our understanding and management of ecosystems. Advances in molecular techniques allow studying microbial communities in situ and with high taxonomic resolution. However, the taxonomic level which provides the best trade-off between our ability to detect multiple-stressor effects versus the goal of studying entire communities remains unknown. We used outdoor mesocosms simulating small streams to investigate the effects of four agricultural stressors (nutrient enrichment, the nitrification inhibitor dicyandiamide (DCD), fine sediment and flow velocity reduction) on stream bacteria (phyla, orders, genera, and species represented by Operational Taxonomic Units with 97% sequence similarity). Community composition was assessed using amplicon sequencing (16S rRNA gene, V3-V4 region). DCD was the most pervasive stressor, affecting evenness and most abundant taxa, followed by sediment and flow velocity. Stressor pervasiveness was similar across taxonomic levels and lower levels did not perform better in detecting stressor effects. Community coverage decreased from 96% of all sequences for abundant phyla to 28% for species. Order-level responses were generally representative of responses of corresponding genera and species, suggesting that this level may represent the best compromise between stressor sensitivity and coverage of bacterial communities.

Predicting improved optical water quality in rivers resulting from soil conservation actions on land.

Deforestation in New Zealand has led to increased soil erosion and sediment loads in rivers. Increased suspended fine sediment in water reduces visual clarity for humans and aquatic animals and reduces penetration of photosynthetically available radiation to aquatic plants. To mitigate fine-sediment impacts in rivers, catchment-wide approaches to reducing soil erosion are required. Targeting soil conservation for reducing sediment loads in rivers is possible through existing models; however, relationships between sediment loads and sediment-related attributes of water that affect both ecology and human uses of water are poorly understood. We present methods for relating sediment loads to sediment concentration, visual clarity, and euphotic depth. The methods require upwards of twenty concurrent samples of sediment concentration, visual clarity, and euphotic depth at a river site where discharge is measured continuously. The sediment-related attributes are related to sediment concentration through regressions. When sediment loads are reduced by soil conservation action, percentiles of sediment concentration are necessarily reduced, and the corresponding percentiles of visual clarity and euphotic depth are increased. The approach is demonstrated on the Wairua River in the Northland region of New Zealand. For this river we show that visual clarity would increase relatively by approximately 1.4 times the relative reduction of sediment load. Median visual clarity would increase from 0.75m to 1.25m (making the river more often suitable for swimming) after a sediment load reduction of 50% associated with widespread soil conservation on pastoral land. Likewise euphotic depth would increase relatively by approximately 0.7 times the relative reduction of sediment load, and the median euphotic depth would increase from 1.5m to 2.0m with a 50% sediment load reduction.

Long-term effects of local disturbance history on mobile stream invertebrates.

The patchy distribution of benthic invertebrates in streams and rivers is an important and widely researched phenomenon. Previous studies on reasons for this patchiness have neglected the potential role of local disturbance history, probably because most lotic invertebrates are mobile and any effect of disturbance history was thought to be short-lived. Here we demonstrate for a New Zealand gravel-bed stream that local disturbance history can have long-term effects on the distribution of highly mobile stream invertebrates. Buried scour chains (100 at each of three 20-m sites within a 350-m reach) indicated that a spate with a return period of 5 months caused a mosaic of bed patches with different stabilities. More than 2 months after the spate, we took random, quantitative samples at each site from five patches that had experienced 4 cm or more of scour during the spate, from five patches with 4 cm or more of fill, and from five stable patches. Density of the dominant invertebrate taxon, the highly mobile mayfly Deleatidium spp., and densities of another three of the seven most common taxa differed significantly between patch stability categories. Larvae of Deleatidium, the black fly Austrosimulium spp. and the dipteran Eriopterini were most abundant in fill patches, whereas Isopoda were most abundant in scour patches. Total invertebrate densities and densities of six common taxa also differed between sites, although these were only 95-120 m apart. These results show that local disturbance history can have long-term effects on lotic invertebrates and be an important cause of invertebrate patchiness. The observed effects might have been even stronger had we sampled sooner after the spate or after a large flood. Disturbance history may influence invertebrates both directly (through dislodgement or mortality) and indirectly, through effects on the spatial distribution of their resources. Our results suggest that the role of disturbance in structuring animal communities dominated by mobile species may be more important than previously thought.

Prevalence of Giardia and Cryptosporidium spp in calves from a region in New Zealand experiencing intensification of dairying.

AIM: To investigate the prevalence of Giardia and Cryptosporidium spp in calves born during two spring-calving seasons in a rapidly intensifying dairying region in the South Island; to evaluate potential correlations between the prevalence of the organism and age, characteristics of faeces, and animal-housing practices; and to compare the results with those from established dairying regions in the North Island. METHODS: A longitudinal study was conducted in 2005 and 2006 on 10 dairy farms located in the Otago region, South Island, New Zealand. A total of 1,190 faecal samples were collected from calves 1-7 weeks old. Direct immunofluorescent microscopy was used to screen the faecal samples for Giardia cysts and Cryptosporidium oocysts. The prevalence of Giardia and Cryptosporidium spp detected in calves in Otago was compared with that previously measured in calves from dairying regions in the Waikato and Manawatu, in the North Island . RESULTS: On average, Giardia and Cryptosporidium spp were detected in 31% and 2.6% of all samples, respectively. The prevalence of Giardia spp cysts in faeces was higher in calves >or=3 weeks of age in 2005 (por=2 weeks of age in 2006 (p=0.07) than in younger calves. No age-related pattern was observed for Cryptosporidium spp in either year. No correlations were evident between characteristics of faeces or animal housing practices and the prevalence of either organism, which did not differ between the two dairy farming regions. CONCLUSIONS: Prevalence rates of Giardia and Cryptosporidium spp in calves 1-7 weeks old did not differ between the two geographical regions, nor did the regions' distinct climate conditions appear to influence the prevalence of either pathogen. Considering data from both years together, the presence of Giardia spp cysts in faeces appeared to increase in the first week or two after birth, so that, on average, 30-40% of animals from 3-6 weeks of age were affected. CLINICAL RELEVANCE: This is the first study to report the prevalence of Giardia and Cryptosporidium spp in dairy calves in the South Island of New Zealand.