Detalhe da pesquisa
1.
Enhancer target prediction: state-of-the-art approaches and future prospects.
Biochem Soc Trans;
51(5): 1975-1988, 2023 10 31.
Artigo
em Inglês
| MEDLINE
| ID: mdl-37830459
2.
DeepCellState: An autoencoder-based framework for predicting cell type specific transcriptional states induced by drug treatment.
PLoS Comput Biol;
17(10): e1009465, 2021 10.
Artigo
em Inglês
| MEDLINE
| ID: mdl-34610009
3.
ReFeaFi: Genome-wide prediction of regulatory elements driving transcription initiation.
PLoS Comput Biol;
17(9): e1009376, 2021 09.
Artigo
em Inglês
| MEDLINE
| ID: mdl-34491989
4.
Promoter analysis and prediction in the human genome using sequence-based deep learning models.
Bioinformatics;
35(16): 2730-2737, 2019 08 15.
Artigo
em Inglês
| MEDLINE
| ID: mdl-30601980
5.
DEEPre: sequence-based enzyme EC number prediction by deep learning.
Bioinformatics;
34(5): 760-769, 2018 03 01.
Artigo
em Inglês
| MEDLINE
| ID: mdl-29069344
6.
TSSPlant: a new tool for prediction of plant Pol II promoters.
Nucleic Acids Res;
45(8): e65, 2017 05 05.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28082394
7.
Sequence2Vec: a novel embedding approach for modeling transcription factor binding affinity landscape.
Bioinformatics;
33(22): 3575-3583, 2017 Nov 15.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28961686
8.
HMD-ARG: hierarchical multi-task deep learning for annotating antibiotic resistance genes.
Microbiome;
9(1): 40, 2021 02 08.
Artigo
em Inglês
| MEDLINE
| ID: mdl-33557954
9.
Analysis of transcript-deleterious variants in Mendelian disorders: implications for RNA-based diagnostics.
Genome Biol;
21(1): 145, 2020 06 17.
Artigo
em Inglês
| MEDLINE
| ID: mdl-32552793
10.
A deep learning framework to predict binding preference of RNA constituents on protein surface.
Nat Commun;
10(1): 4941, 2019 10 30.
Artigo
em Inglês
| MEDLINE
| ID: mdl-31666519
11.
Recognition of prokaryotic and eukaryotic promoters using convolutional deep learning neural networks.
PLoS One;
12(2): e0171410, 2017.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28158264
12.
ACRE: Absolute concentration robustness exploration in module-based combinatorial networks.
Synth Biol (Oxf);
2(1): ysx001, 2017 Jan.
Artigo
em Inglês
| MEDLINE
| ID: mdl-32995502
13.
SBOLme: a Repository of SBOL Parts for Metabolic Engineering.
ACS Synth Biol;
6(4): 732-736, 2017 04 21.
Artigo
em Inglês
| MEDLINE
| ID: mdl-28076956