Aromatic oligoesters as novel helix mimetic scaffolds.

The design, synthesis, and conformational analysis of a novel aromatic oligoester helix mimetic scaffold is reported. A range of amino acid-type side-chain functionality can be readily incorporated into monomer building blocks over three facile synthetic steps. Analysis of representative dimers revealed a stable conformer capable of effective mimicry of a canonical α-helix and the scaffold was found to be surprisingly stable to degradation in aqueous solutions at acidic and neutral pH.

Correction: Estimating the cooperativity of PROTAC-induced ternary complexes using 19F NMR displacement assay.

[This corrects the article DOI: 10.1039/D1MD00215E.].

Estimating the cooperativity of PROTAC-induced ternary complexes using 19F NMR displacement assay.

Cooperativity is an important parameter to understand the ternary complexes formed by protein degraders. We developed fluorine NMR competition binding experiments to determine cooperativity of PROTACs. We show applicability to estimate both positive and negative cooperativity, also with homo-dimerizers, and highlight key features and considerations for optimal assay development.

Spy vs. spy: selecting the best reporter for 19F NMR competition experiments.

Systematic characterization of a series of fluorinated VHL ligands, varying binding affinity and position of the trifluoromethyl group, qualifies a spy molecule for competitive 19F NMR screening and reveals guiding principles to develop highly sensitive assays with low material consumption.