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Identifying potential drug targets for idiopathic pulmonary fibrosis: a mendelian randomization study based on the druggable genes.
Liu, Zetao; Peng, Zhiyu; Lin, Huahang; Zhou, Ke; Liang, Linchuan; Cao, Jie; Huang, Zhaokang; Mei, Jiandong.
Afiliação
  • Liu Z; Department of Thoracic Surgery, West China Hospital, Sichuan University, Chengdu, 610041, China.
  • Peng Z; Western China Collaborative Innovation Center for Early Diagnosis and Multidisciplinary Therapy of Lung Cancer, Sichuan University, Chengdu, China.
  • Lin H; Department of Thoracic Surgery, West China Hospital, Sichuan University, Chengdu, 610041, China.
  • Zhou K; Western China Collaborative Innovation Center for Early Diagnosis and Multidisciplinary Therapy of Lung Cancer, Sichuan University, Chengdu, China.
  • Liang L; Department of Thoracic Surgery, West China Hospital, Sichuan University, Chengdu, 610041, China.
  • Cao J; Western China Collaborative Innovation Center for Early Diagnosis and Multidisciplinary Therapy of Lung Cancer, Sichuan University, Chengdu, China.
  • Huang Z; Department of Thoracic Surgery, West China Hospital, Sichuan University, Chengdu, 610041, China.
  • Mei J; Western China Collaborative Innovation Center for Early Diagnosis and Multidisciplinary Therapy of Lung Cancer, Sichuan University, Chengdu, China.
Respir Res ; 25(1): 217, 2024 May 23.
Article em En | MEDLINE | ID: mdl-38783236
ABSTRACT

BACKGROUND:

Idiopathic pulmonary fibrosis (IPF) is a chronic fibrotic interstitial lung disease characterized by progressive dyspnea and decreased lung function, yet its exact etiology remains unclear. It is of great significance to discover new drug targets for IPF.

METHODS:

We obtained the cis-expression quantitative trait locus (cis-eQTL) of druggable genes from eQTLGen Consortium as exposure and the genome wide association study (GWAS) of IPF from the International IPF Genetics Consortium as outcomes to simulate the effects of drugs on IPF by employing mendelian randomization analysis. Then colocalization analysis was performed to calculate the probability of both cis-eQTL of druggable genes and IPF sharing a causal variant. For further validation, we conducted protein quantitative trait locus (pQTL) analysis to reaffirm our findings.

RESULTS:

The expression of 45 druggable genes was significantly associated with IPF susceptibility at FDR < 0.05. The expression of 23 and 15 druggable genes was significantly associated with decreased forced vital capacity (FVC) and diffusing capacity of the lungs for carbon monoxide (DLco) in IPF patients, respectively. IPF susceptibility and two significant genes (IL-7 and ABCB2) were likely to share a causal variant. The results of the pQTL analysis demonstrated that high levels of IL-7 in plasma are associated with a reduced risk of IPF (OR = 0.67, 95%CI 0.47-0.97).

CONCLUSION:

IL-7 stands out as the most promising potential drug target to mitigate the risk of IPF. Our study not only sheds light on potential drug targets but also provides a direction for future drug development in IPF.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Fibrose Pulmonar Idiopática / Estudo de Associação Genômica Ampla / Análise da Randomização Mendeliana Limite: Female / Humans / Male Idioma: En Revista: Respir Res Ano de publicação: 2024 Tipo de documento: Article País de afiliação: China

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Fibrose Pulmonar Idiopática / Estudo de Associação Genômica Ampla / Análise da Randomização Mendeliana Limite: Female / Humans / Male Idioma: En Revista: Respir Res Ano de publicação: 2024 Tipo de documento: Article País de afiliação: China