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1.
J Helminthol ; 98: e28, 2024 Mar 22.
Artículo en Inglés | MEDLINE | ID: mdl-38516701

RESUMEN

A new species of trematode of anaporrhutine gorgoderid, from the gill chambers of the Munda round ray Urotrygon munda in Costa Rica is described, based on an integrative taxonomic approach that includes the use of light and scanning electron microscopy, ITS2 and 28S rDNA sequencing, and phylogenetic analysis. Anaporrhutum mundae sp. nov. can be distinguished from congeneric species by a combination of morphological traits and particularly by having the genital pore opening at the level of the intestinal bifurcation. The new species also can be distinguished from all other species of Anaporrhutum, except A. euzeti Curran, Blend & Overstreet, 2003, by having fewer testicular follicles per testis. Anaporrhutum mundae sp. nov. also differs from A. euzeti in its forebody shape and by having different morphology and location of the vitellaria. The study of the tegumental surface of A. mundae sp. nov., as revealed by scanning electron microscopy, allowed detection of new morphological characters for a member of Anaporrhutinae that may be of taxonomic value. These are: a stylet cavity dorsal to the oral sucker with a large penetration gland opening on each side of the cavity and small penetration gland openings located ventral to the stylet cavity, arranged in a circle around the mouth. This represents the first record of an Anaporrhutum species from Costa Rica. Further, A. mundae sp. nov. represents the first parasite described or reported in this host.


Asunto(s)
Parásitos , Trematodos , Infecciones por Trematodos , Masculino , Animales , Infecciones por Trematodos/parasitología , Filogenia , Costa Rica
2.
PLoS One ; 18(12): e0296335, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-38153939

RESUMEN

Stelliferinae is the third most speciose subfamily of Sciaenidae, with 51 recognized species arranged in five genera. Phylogenies derived from both morphological and molecular data support the monophyly of this subfamily, although there is no general consensus on the intergeneric relationships or the species diversity of this group. We used the barcoding region of the cytochrome oxidase C subunit I (COI) gene to verify the delimitation of Stelliferinae species based on the Automatic Barcode Gap Discovery (ABGD), Generalized Mixed Yule Coalescence (GMYC), and Bayesian Poisson Tree Process (bPTP) methods. In general, the results of these different approaches were congruent, delimiting 30-32 molecular operational taxonomic units (MOTUs), most of which coincided with valid species. Specimens of Stellifer menezesi and Stellifer gomezi were attributed to a single species, which disagrees with the most recent review of this genus. The evidence also indicated that Odontoscion xanthops and Corvula macrops belong to a single MOTU. In contrast, evidence also indicates presence of distinct lineages in both Odontoscion dentex and Bairdiella chrysoura. Such results are compatible with the existence of cryptic species, which is supported by the genetic divergence and haplotype genealogy. Therefore, the results of the present study indicate the existence of undescribed diversity in the Stelliferinae, which reinforces the need for an ample taxonomic review of the fish in this subfamily.


Asunto(s)
Código de Barras del ADN Taxonómico , Perciformes , Animales , Código de Barras del ADN Taxonómico/métodos , Teorema de Bayes , ADN , Filogenia , Perciformes/genética
3.
Zootaxa ; 5376(1): 1-89, 2023 Nov 27.
Artículo en Inglés | MEDLINE | ID: mdl-38220798

RESUMEN

Based on a combination of intensive literature review, electronic database searches, re-identification of museum specimens, and fieldwork, we provide an updated checklist of the continental fishes of Nicaragua. This checklist, systematically arranged at the ordinal and familial level, includes nomenclatural revisions, distributional information, conservation status, and when appropriate, cross-references to previous lists and revisionary works on the fish fauna of the country and region (Central America); illustrations and descriptions to the family level and color photographs of some representative species are also included. According to our results, the native Nicaraguan continental fish fauna is composed of 244 species, divided into 111 genera, 45 families, 24 orders, and two classes; increasing by 60 (i.e., 32.6%) the number of species originally reported by Villa (1982; i.e., the most comprehensive work published to date). The majority of the Nicaraguan native continental fish species, according to their supposed tolerance to salinity, are peripheral (68.9%), followed by secondary freshwater fishes (23.8%), and primary freshwater fishes (only 7.4%). Fish diversity in the 19 major river basins ranged between 21 and 90 species (mean = 58 species, median = 60); the Escondido (Es; 87 species), in the Atlantic, and the Pacfico de Nicaragua (PN; 90), in the Pacific, presented the highest species richness. Most species (188) are restricted to elevations between 0 and 100 meters above sea level (masl); only a few species (18), in contrast, were found at elevations greater than 500 masl (up to 780 masl). Fourteen species in this revision are listed as endemic to Nicaragua. Regarding their conservation status, 22 species (9.0%) are categorized, according to the International Union for Conservation of Nature (IUCN), as Data Deficient, 186 (76.2%) as Least Concern, and seven (2.9%) as Near Threatened; while 24 species (9.8%) are listed as Threatened, thirteen (5.3%) as Vulnerable, two (0.8%) as Endangered, and nine (3.7%) as Critically Endangered. Five species (2.0%) have not yet been evaluated. Six exotic species are also reported. Our results provide a framework for future taxonomic and biogeographic works on fishes from this country and region (Central America), particularly by providing up-to-date knowledge on nomenclature and distributions. In addition, the data provided in this revision will help to monitor fish distributional changes in the future due to human introductions and global change and will aid in conservation decisions concerning Nicaraguan continental fishes.


Asunto(s)
Agua Dulce , Ríos , Humanos , Animales , Nicaragua , Peces
4.
Sci Rep ; 12(1): 22162, 2022 12 22.
Artículo en Inglés | MEDLINE | ID: mdl-36550282

RESUMEN

Microphilypnus and Leptophilypnion are miniaturized genera within the family Eleotridae. The evolutionary relationships among these taxa are still poorly understood, and molecular analyses are restricted to mitochondrial genes, which have not been conclusive. We compiled both mitochondrial and nuclear genes to study the phylogenetic position of Microphilypnus and the evolutionary history and relationships of eleotrids. We propose that Microphilypnus and Leptophilypnus (a non-miniature genus) are not sister groups as suggested by previous studies, but rather separate lineages that arose in the early Eocene, with Leptophilypnus recovered as a sister group to the other analyzed eleotrids. In fact, Microphilypnus is currently associated with the Neotropical clade Guavina/Dormitator/Gobiomorus. We also identified a well-supported clade that indicated Gobiomorus and Hemieleotris as paraphyletic groups, besides a close relationship among Calumia godeffroyi, Bunaka gyrinoides, Eleotris and Erotelis species. This is the first comprehensive report about the evolutionary relationships in members of the family Eleotridae, including multiloci and multispecies approaches. Therefore, we provided new insights about the phylogenetic position of some taxa absent in previous studies, such as the miniature genus Microphilypnus and a recently described species of Eleotris from South America.


Asunto(s)
Peces , Perciformes , Animales , Filogenia , Análisis de Secuencia de ADN , Peces/genética , Perciformes/genética , Evolución Biológica , ADN Mitocondrial/genética
5.
Zootaxa ; 5182(6): 528-540, 2022 Sep 09.
Artículo en Inglés | MEDLINE | ID: mdl-36095668

RESUMEN

In this paper we report the rediscovery of the endangered cichlid fish Amphilophus lyonsi (Gosse 1966) in the southern Pacific region of Costa Rica. Additionally, we provide new and updated information on the morphology, growth, habitat use and distribution of the species based on data and specimens recently collected as well as on museum material. This information will be relevant for future taxonomic and conservation studies/purposes, contributing to a better understanding on the biology of the species.


Asunto(s)
Cíclidos , Animales , Costa Rica , Ecosistema
6.
Plants (Basel) ; 11(14)2022 Jul 13.
Artículo en Inglés | MEDLINE | ID: mdl-35890473

RESUMEN

The Adapting Agriculture to Climate Change Project set out to improve the diversity, quantity, and accessibility of germplasm collections of crop wild relatives (CWR). Between 2013 and 2018, partners in 25 countries, heirs to the globetrotting legacy of Nikolai Vavilov, undertook seed collecting expeditions targeting CWR of 28 crops of global significance for agriculture. Here, we describe the implementation of the 25 national collecting programs and present the key results. A total of 4587 unique seed samples from at least 355 CWR taxa were collected, conserved ex situ, safety duplicated in national and international genebanks, and made available through the Multilateral System (MLS) of the International Treaty on Plant Genetic Resources for Food and Agriculture (Plant Treaty). Collections of CWR were made for all 28 targeted crops. Potato and eggplant were the most collected genepools, although the greatest number of primary genepool collections were made for rice. Overall, alfalfa, Bambara groundnut, grass pea and wheat were the genepools for which targets were best achieved. Several of the newly collected samples have already been used in pre-breeding programs to adapt crops to future challenges.

7.
Mitochondrial DNA B Resour ; 7(6): 994-995, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35692640

RESUMEN

We herein describe the complete mitochondrial genome of Paralonchurus dumerilii (Sciaenidae) and infer its phylogenetic position within the family. The genome is 16,498 bp long and featured by 13 protein-coding genes (PCGs), two rRNAs, 22 tRNAs, and a control region (D-loop). Our phylogenetic analysis suggests a basal position of P. dumerilii as the sister group of the other species of Sciaenidae analyzed.

8.
Mol Phylogenet Evol ; 173: 107496, 2022 08.
Artículo en Inglés | MEDLINE | ID: mdl-35569809

RESUMEN

The Panamic Clingfish Gobiesox adustus is widely distributed in the Tropical Eastern Pacific (TEP), from the central Gulf of California, Mexico to Ecuador, including the oceanic Revillagigedo Archipelago, and Isla del Coco. This cryptobenthic species is restricted to very shallow rocky-reef habitats. Here, we used one mitochondrial and three nuclear DNA markers from 155 individuals collected across the distribution range of the species in order to evaluate if geographically structured populations exist and to elucidate its evolutionary history. Phylogenetic analyses recovered a monophyletic group, with four well-supported, allopatric subgroups. Each subgroup corresponded to one of the following well-known biogeographic regions/provinces: 1) the Revillagigedo Archipelago, 2) the Cortez + Mexican provinces (Mexico), 3) the Panamic province (from El Salvador to Ecuador), and 4) Isla del Coco. A molecular-clock analysis showed a mean date for the divergence between clade I (the Revillagigedos and Cortez + Mexican provinces) and clade II (Panamic province and Isla del Coco) in the Pliocene, at ca. 5.33 Mya. Within clade I, the segregation between the Revillagigedos and Cortez + Mexican province populations was dated at ca. 1.18 Mya, during the Pleistocene. Within clade II, the segregation between samples of Isla del Coco and the Panamic province samples was dated at ca. 0.77 Mya, during the Pleistocene. The species tree, Bayesian species delimitation tests (BPP and STACEY), the ΦST, AMOVA, and the substantial genetic distances that exist between those four subgroups, indicate that they are independent evolutionary units. These cladogenetic events seem to be related to habitat discontinuities, and oceanographic and geological processes that produce barriers to gene flow for G. adustus, effects of which are enhanced by the intrinsic ecological characteristics of this species.


Asunto(s)
Evolución Biológica , Peces , Animales , Teorema de Bayes , ADN Mitocondrial/genética , Peces/genética , Humanos , Filogenia , Filogeografía
9.
Mol Phylogenet Evol ; 166: 107316, 2022 01.
Artículo en Inglés | MEDLINE | ID: mdl-34537324

RESUMEN

Marine species that are widely distributed in the Tropical Eastern Pacific (TEP) has served as a model for studying biogeographic patterns resulting from the effects of intraregional habitat discontinuities and oceanographic processes on the diversification and evolution of cryptobenthic reef fishes. Tomicodon petersii, a clingfish (Gobiesocidae) endemic to the TEP, is found on very shallow rocky reefs from central Mexico to northern Peru, and in the Cocos and Galapagos islands. We evaluated the effect of likely biogeographic barriers in different parts of the TEP on the diversification process of this species. We used one mitochondrial and three nuclear DNA markers from 112 individuals collected across the distribution range of T. petersii. Our phylogenetic results showed the samples constituted a monophyletic group, with three well-supported, allopatric subgroups: in the Mexican province, the Panamic province (from El Salvador to Ecuador), and the Galapagos Islands. The split between the Mexican and more southerly clades was estimated to occur at the end of the Miocene ca. 5.74 Mya, and the subsequent cladogenetic event separating the Galapagos population from the Panamic population at the junction of the Pliocene and Pleistocene, ca. 2.85 Mya. The species tree, Bayesian species delimitation tests (BPP), STACEY, and substantial genetic distances separating these three populations indicate that these three independent evolutionary units likely include two unnamed species. The cladogenetic events that promoted the formation of those genetically differentiated groups are consistent with disruptive effects on gene flow of habitat discontinuities and oceanographic processes along the mainland shoreline in the TEP and of ocean-island isolation, in conjunction with the species intrinsic life-history characteristics.


Asunto(s)
Peces , Especiación Genética , Animales , Teorema de Bayes , ADN Mitocondrial/genética , Ecosistema , Peces/genética , Filogenia
10.
Rev. biol. trop ; 69(supl. 1)mar. 2021.
Artículo en Inglés | LILACS-Express | LILACS | ID: biblio-1507783

RESUMEN

Introduction: The family Carapidae includes about 40 species of marine fishes distributed in coastal habitats worldwide. The family includes some free-living species, however, most of them are found as commensal inquilines or parasites of marine invertebrates, including several echinoderm species. In the Eastern Tropical Pacific, the biology and host use of the representatives of the Carapidae is relatively poorly known. Objective: The present study reports the occurrence of the Star pearlfish Carapus mourlani within three previously unknown hosts in the region: the sea stars Nidorellia armata, Phataria unifascialis, and the sea cucumber Stichopus horrens. Some ecological implications and considerations regarding such symbiotic relationships are raised and discussed. Additional morphometric and meristic data for the fish and the echinoderms are also provided and discussed. Methods: Echinoderms were collected, from 25 localities along the North Pacific coast of Costa Rica, and were carefully examined searching for commensal/parasitic fishes. Echinoderms and fishes were identified and characterized in accordance with the specialized literature. Results: A total of 497 echinoderms, including about 60 species, were collected and examined. Commensal/parasitic fish (a single species represented by 13 specimens) were found in three echinoderm specimens/species. Conclusions: The list of echinoderm hosts for this carapid fish, through its whole distribution range, rises to 12 species (six sea stars and six sea cucumbers) and that could be a consequence of its wide geographic distribution, its generalist feeding habits and opportunistic commensal behavior.


Introducción: La familia Carapidae está compuesta por alrededor de 40 especies de peces marinos, presentes en hábitats costeros alrededor de todo el mundo. Se incluyen dentro de esta familia algunas especies de vida libre, no obstante, la mayoría de carápidos son inquilinos oportunistas o parásitos de algunos grupos de invertebrados marinos, incluyendo varias especies de equinodermos. En el Pacífico Tropical Oriental (PTO), se sabe relativamente poco sobre la biología de estos peces, así como de las diversas asociaciones existentes y de los hospederos utilizados. Objetivo: En este trabajo reportamos la ocurrencia del Pez perla estrella Carapus mourlani en tres nuevos hospederos: las estrellas de mar Nidorellia armata y Phataria unifascialis, y el pepino de mar Stichopus horrens. También se discuten algunas implicaciones y consideraciones ecológicas relacionadas a estas asociaciones simbióticas. Además, se proveen y discuten datos morfométricos y merísticos de los peces y sus hospederos. Métodos: Se realizaron recolectas de equinodermos, entre 2018 y 2019, en un total de 25 localidades distribuidas al norte de la costa Pacífico de Costa Rica, los cuales fueron cuidadosamente revisados en búsqueda de peces comensales/parásitos. Los equinodermos y los peces fueron identificados y caracterizados de acuerdo con la literatura especializada. Resultados: Se recolectaron y examinaron un total de 497 equinodermos, incluyendo alrededor de 60 especies, de los cuales solo tres individuos-especies estuvieron ocupados por peces comensales/parásitos. Conclusiones: La lista de hospederos equinodermos de C. mourlani a lo largo de su ámbito de distribución geográfico llega a 12 especies (seis estrellas de mar y seis pepinos de mar), lo cual podría ser un reflejo de su amplia distribución geográfica, de sus hábitos de alimentación generalistas y de su comportamiento oportunista en lo relativo al uso de hospederos.

11.
Rev. biol. trop ; 69(supl. 1)mar. 2021.
Artículo en Español | LILACS-Express | LILACS | ID: biblio-1507795

RESUMEN

Introducción: El intermareal rocoso constituye un paisaje marino costero dominante en el Pacífico Tropical Oriental, albergando comunidades biológicas altamente diversas y funcionalmente complejas. El conocimiento sobre la diversidad y los diversos procesos biológicos que ocurren en tales ambientes es, no obstante, bastante limitado a escala regional. Objetivo: Cuantificar, describir y comparar (a escala regional) la diversidad ictiológica asociada al intermareal rocoso del Área de Conservación Guanacaste (ACG), Costa Rica, así como evaluar y discutir algunos patrones biogeográficos y ecológicos. Métodos: Entre 2014 y 2019 se muestrearon un total de 49 pozas de marea en siete ubicaciones dentro del ACG. Se obtuvieron datos sobre diversidad absoluta (presencia/ausencia de especies), además de algunos datos ecológicos (estatus de residencia, estadio(s) de desarrollo, gremio trófico, hábitos de agrupación y crípticos y distribución generalizada) los cuales se compararon con datos publicados de otros estudios/inventarios llevados a cabo en diversas localidades (20) a lo largo de la costa del Pacífico Oriental. Por medio de un análisis de similitud se evaluaron posibles patrones de agrupamiento entre localidades (según su composición de especies) y, bajo una perspectiva biogeográfica, hipótesis previas de regionalización. Resultados: Se registraron un total de 67 especies de peces óseos asociadas al intermareal rocoso del ACG, siendo la localidad con datos publicados, más diversa a nivel del Pacífico Oriental. En el ACG los componentes/categorías transitorio con 30 especies (44.8 %), juveniles con 38 especies (55.9 %), carnívoros con 47 especies (70.1 %), solitarios con 32 especies (47.8 %) y endémico del PTO con 66 especies (98 %), fueron dominantes. A nivel regional se recopilaron datos para un total de 246 especies. Los resultados del análisis de similitud soportaron el esquema de división biogeográfico, definido a priori, a nivel regional, con las localidades ubicadas dentro de las provincias Californiana, Cortez, Mexicana, Panámica y Peruana-Chilena recuperadas como grupos altamente consistentes. Esta estructura es consecuente con el efecto de barreras como las brechas arenosas de Sinaloa y Centroamericana, entre otras, limitando el flujo de especies entre unidades biogeográficas. Conclusiones: El ACG presenta una elevada diversidad ictiológica asociada a su intermareal rocoso producto de una combinación de factores única a nivel regional. Los resultados de este estudio refuerzan además la necesidad de realizar más estudios básicos y aplicados a diferentes escalas local y regional con el objetivo de ayudar a comprender y conocer mejor diversos aspectos clave de la dinámica y procesos físico-químico-biológicos ocurriendo en las zonas intermareales, de su riqueza biológica asociada, de su importancia dentro del paisaje marino-costero como un continuo y de las posibles afectaciones que estos podrían sufrir debido al impacto de las actividades humanas.


Introduction: The rocky intertidal constitutes a dominant coastal seascape in the Eastern Tropical Pacific, harboring highly diverse and functionally complex biological communities. The knowledge about the diversity and the diverse biological processes that occur in such environments is, however, quite limited on a regional scale. Objective: Quantify, describe and compare (on a regional scale) the ichthyological diversity associated with the rocky intertidal zone of the Guanacaste Conservation Area (ACG), Costa Rica, as well as to evaluate and discuss some biogeographic and ecological patterns. Methods: A total of 49 tide pools were sampled between 2014 and 2019, at seven locations within the ACG. Data on absolute diversity (presence/absence of species) were obtained, in addition to some ecological data (residence status, development stage (s), trophic guild, aggregation and cryptic habits and generalized geographic distribution), these data were compared with published records from other surveys/inventories carried out at various locations (20) along the Eastern Pacific coast. Through a similarity analysis, both possible clustering patterns between localities (according to their species composition) and previous hypotheses of regionalization, under a biogeographic perspective, were evaluated. Results: A total of 67 species of bony fish were recorded in the rocky intertidal area of the ACG, being this the most diverse locality (with published data) in the Eastern Pacific. The components/categories "transitory" with 30 species (44.8 %), "juveniles" with 38 species (55.9 %), "carnivores" with 47 species (70.1 %), "solitary" with 32 species (47.8 %) and "endemic to the ETP" with 66 species (98 %), were dominant (in terms of the total number of species) within the ACG. The results of the similarity analysis supported the biogeographic division scheme, defined a priori; with the localities within the Californian, Cortez, Mexican, Panamic and Peruvian-Chilean provinces recovered as highly consistent groups. This structure is consistent with the effect of barriers such as the sandy gaps of Sinaloa and Central America, among others, limiting the flow of species between biogeographic units. Conclusions: The ACG has a high ichthyological diversity associated with its rocky intertidal zone, which is product of a unique combination of factors at the regional level. The results of this study reinforce the need to carry out more basic and applied studies with the aim of helping to better understand and know different key aspects of the dynamics and physical-chemical-biological processes occurring in intertidal zones, of its associated biological diversity, of its importance within the marine-coastal landscape as a continuum and of the possible effects that these environments could suffer due to the impact of human activities.

12.
Zootaxa ; 5072(2): 165-172, 2021 Nov 29.
Artículo en Inglés | MEDLINE | ID: mdl-35390875

RESUMEN

Anelasma squalicola is a parasitic barnacle of members of the deep-water shark families Etmopteridae, Pentanchidae and Scyliorhinidae. We report the first published confirmation of this species in the Eastern Pacific Ocean, based on material collected off Costa Rica, its first record as a parasite of the Ninja lantern shark, Etmopterus benchley (Etmopteridae), and a new size record for the host. The information presented herein expands the knowledge (distribution and host usage) of this enigmatic species.


Asunto(s)
Parásitos , Tiburones , Thoracica , Animales , Humanos , Océano Pacífico , Tiburones/parasitología
13.
Zootaxa ; 5083(1): 1-72, 2021 Dec 23.
Artículo en Inglés | MEDLINE | ID: mdl-35390941

RESUMEN

The knowledge of the Costa Rican freshwater fish fauna continues to grow given the discovery of new taxa, the recognition of taxa resurrected from synonymy and the corroboration of new country records and new range extensions. Moreover, recent advances in the understanding of the phylogenetic relationships and status of many supraspecific groups have led to numerous taxonomic and nomenclatural changes. Given this, the purpose of this paper is to update the known composition, distribution and clasification of the Costa Rican freshwater fish fauna taking as reference the most recent list for the country published by Angulo et al. (2013). A total of 23 new country records (i.e., species; distributed in 17 families and 21 genera), 33 new range extensions (distributed in 20 families and 30 genera) and several nomenclatural changes are reported, illustrated and discussed here. An updated and annotated checklist of the freshwater fishes of the country (including data for a total of 283 species, 13 of which are exotic, distributed in two classes, 27 orders, 55 families and 136 genera) is also provided.


Asunto(s)
Peces , Agua Dulce , Animales , Costa Rica , Humanos , Filogenia
14.
Zootaxa ; 4890(2): zootaxa.4890.2.7, 2020 Dec 02.
Artículo en Inglés | MEDLINE | ID: mdl-33311237

RESUMEN

During a recreational fishing trip on May 2017 to Isla Montuosa, Pacific coast of Panama (7.467472, -82.266556; 30 m depth), a specimen belonging to the genus Caranx was captured. The specimen showed an unusual combination of external characters, intermediate among the species known to occur in the Tropical Eastern Pacific (TEP), which caught the attention of the fishermen. A detailed analysis involving traditional morphology and molecular techniques revealed that the specimen corresponds to a hybrid of the species C. melampygus and C. sexfasciatus. This represents, to the best of our knowledge, the first confirmed record of hybridization within the genus and family in the TEP and the second record for the entire Pacific Ocean.


Asunto(s)
Perciformes , Animales , Hibridación Genética , Océano Pacífico
15.
Zootaxa ; 4852(1): zootaxa.4852.1.8, 2020 Sep 14.
Artículo en Inglés | MEDLINE | ID: mdl-33056713

RESUMEN

The checklist by Robertson et al. (2017) of fishes from the tropical eastern Pacific included information on three members of the family Triglidae: Bellator loxias (Jordan, 1897), Prionotus ruscarius and P. stephanophrys Lockington, 1881. Unfortunately, the identification of four specimens as P. ruscarius is incorrect, as they are Bellator gymnostethus. We thank Benjamin Victor for bringing these misidentifications to our notice through his work with mtDNA sequence data from the Barcode of Life Database (BOLD: http://www.boldsystems.org). The photographs of the four specimens on the BOLD website clearly depict a Bellator species rather than a Prionotus. However, the photograph in the 2017 paper (Figure 75, page 78), is correctly identified and labelled as P. ruscarius, and this species was collected on the cruise of the Miguel Oliver discussed in Robertson et al. (2017), see Benavides Moreno et al. (2019). This correction brings the number of triglids collected on that cruise to four species.


Asunto(s)
Perciformes , Animales , ADN Mitocondrial , Peces
16.
Zootaxa ; 4751(1): zootaxa.4751.1.1, 2020 Mar 16.
Artículo en Inglés | MEDLINE | ID: mdl-32230429

RESUMEN

A checklist of the fishes of the Coto River basin, southern Pacific, Costa Rica, compiled from field and museum surveys is presented. A total of 61 species, representing 48 genera, 26 families and 11 orders are listed. Peripheral species were dominant (44.3%), whereas secondary and primary freshwater species represented 32.8% and 23.9% of the total diversity. The orders Cyprinodontiformes (12 spp.) and Perciformes (11) and the families Poeciliidae (8) and Cichlidae (7) were the most diverse. Two species (Lutjanus guttatus and Polydactylus approximans) were new records for Costa Rican freshwaters and ten additional species were found to have expanded geographical ranges. An identification key and a complete photographic album of all fish species recorded are presented. This investigation provides a framework for future studies on fishes from this area complementing previous efforts seeking to increase our knowledge about the freshwater ichthyofauna of the central and southern Pacific regions of Costa Rica.


Asunto(s)
Perciformes , Ríos , Animales , Costa Rica , Peces , Agua Dulce , Océano Pacífico
17.
Rev. biol. trop ; 68mar. 2020.
Artículo en Inglés | LILACS-Express | LILACS | ID: biblio-1507604

RESUMEN

Introduction: Isla del Coco is an important protected area for marine fauna in the Eastern Tropical Pacific. In this area, the species that inhabit the intertidal zone have been subject to few studies. One of the species inhabiting these areas is the clingfish Gobiesox adustus (Gobiesocidae). Objective: To analyze for the first time the mitochondrial gene cytochrome oxidase subunit 1 (cox1) of G. adustus' population from Isla del Coco and compare it with those of continental coast of Costa Rica and Ecuador. Methods: We constructed a haplotype network for these samples. Genetic diversity, distance and structure were calculated by several software. The historical demography of Isla del Coco samples was assessed with the method Bayesian skyline plot as implemented in BEAST2. Results: The samples segregate into three haplogroups: one consisting of the Isla del Coco samples, a second consisting of a subset of the Ecuador samples, and a third consisting of Costa Rica and the remaining Ecuador samples. The genetic distances between the three haplogroups range between 1.6% and 2.1% (uncorrected p-distance), and pairwise ΦST and AMOVA results between the three haplogroups show high and significant values. Conclusions: The Isla del Coco haplogroup showed a Pleistocene population growth, which agrees with demographic patterns found in other marine organisms. The history of isolation of the G. adustus population from Isla del Coco demonstrates the evolutionary independence of this population.


Introducción: Isla del Coco es un área protegida importante para la fauna marina en el Pacifico Oriental Tropical. En esta área, las especies que habitan la zona intermareal han sido objeto de pocos estudios. Una de las especies que habitan en estas áreas es el clingfish Gobiesox adustus (Gobiesocidae). Objetivo: Analizar por primera vez el gen mitocondrial citocromo oxidasa sub unidad 1 (cox1) de poblaciones de Isla del Coco y compararlo con las de la zona continental de Costa Rica y Ecuador. Métodos: Se construyó una red de haplotipos. La diversidad, la distancia y la estructura genética fueron calculadas por diversos programas. La demografía histórica de las muestras de Isla del Coco fue evaluada con el método Bayesian skyline plot implementado en BEAST2. Resultados: Las muestras se agruparon en tres haplogrupos: en un haplogrupo se incluyó a los individuos de Isla del Coco, otro haplogrupo integró las muestras de Ecuador y un tercer grupo incluyó las muestras restantes de Costa Rica y Ecuador. Las distancias genéticas entre los tres haplogrupos oscilan entre 1.6% y 2.1% (p-distancia, no corregida), las distancias ΦST y los resultados de AMOVA entre los tres haplogrupos muestran valores altos y significativos. Conclusiones: El haplogrupo de Isla del Coco mostró un crecimiento poblacional datado en el Pleistoceno, coincidiendo con la demografía poblacional encontrada en otros organismos marinos. La historia de aislamiento de la población de G. adustus de Isla del Coco demostró la independencia evolutiva de esta población.

18.
Rev. biol. trop ; 67(2)abr. 2019.
Artículo en Inglés | LILACS-Express | LILACS | ID: biblio-1507508

RESUMEN

Common bean is a crop recalcitrant to in vitro regeneration and therefore it lacks an efficient transformation protocol that can be reproduced using A. tumefaciens. The main goal of this study was to establish a protocol for A. tumefaciens mediated transformation of Phaseolus vulgaris var. Brunca by marker genes (gusA and nptII) together with the gene for trehalose-6-phosphate synthase from Saccharomyces cerevisiae (TPS1) used in other species to increase tolerance to abiotic stress. The β-glucuronidase activity was detected in 45 % of the LBA4404 ElectroMAX® pCAMBIA1301 infected explants. Transformed explants regenerated new shoots after four to five months period in a kanamycin rich media. Surviving plants were evaluated by PCR and presented an 0.5 % efficiency of transformation. The established protocol for genetic transformation of common bean has two additional advantages with respect to previous reports: (1) it allows for obtaining transformed regenerants and (2) the genetic transformation was stable for the selective gene.


El frijol común en un cultivo recalcitrante a la regeneración in vitro y se carece de un protocolo eficiente y reproducible de transformación genética usando A. tumefaciens. Desarrollamos un protocolo de transformación genética mediada por A. tumefaciens de frijol común variedad Brunca utilizando genes marcadores (gusA y nptII) junto con el gen de la trehalosa-6-fosfato sintasa de levadura (TPS1) utilizado para incrementar tolerancia a estrés abiótico. La actividad de la β-glucoronidasa fue detectada en 45 % de los explantes infectados con la cepa LBA4404 de A. tumefaciens transformada con pCAMBIA1301. Después de 4 o 5 meses se regeneraron tallos en un medio adicionado con kanamicina. Los explantes supervivientes se evaluaron mediante PCR y presentaron una eficiencia de transformación de 0.5 %. El protocolo de transformación genética de frijol común establecido tiene dos ventajas adicionales con respecto a los reportes previos: (1) permite la obtención de regenerares transformados y (2) la transformación genética fue estable para el gen selectivo.

19.
Zootaxa ; 4559(2): 281-313, 2019 Feb 20.
Artículo en Inglés | MEDLINE | ID: mdl-30791017

RESUMEN

The ichthyology collection at the Natural History Museum of El Salvador (MUHNES) was established in 1970. Herein, we provide the first quantitative and qualitative description of the collection; and the first public record of the specimens and taxa therein represented. The MUHNES fish collection is the largest and most important of El Salvador, hosting 3791 specimens in 1005 lots representing 26 orders, 75 families, 159 genera and 248 species from both marine and freshwater environments, including larval, juvenile and mainly adult specimens. MUHNES specimens include 39% of the 587 species reported in the official national checklist of fishes of El Salvador, and support the inclusion of 47 additional species for a new total of 634. Furthermore, MUHNES specimens support (1) the occurrence of Cathorops fuerthii along the coast of El Salvador, extending its distribution from northern Costa Rica; (2) the occurrence of Atherinella starksi in El Salvador, reducing a gap for records between Nicaragua and México and (3) the extension in the distribution range of Profundulus kreiseri to Morazán, El Salvador. This study represents an advance on the understanding of diversity and distribution of the national ichthyofauna.


Asunto(s)
Peces , Museos , Animales , Costa Rica , El Salvador , México , Nicaragua
20.
Zootaxa ; 4420(4): 530-550, 2018 May 18.
Artículo en Inglés | MEDLINE | ID: mdl-30313523

RESUMEN

Trichomycterus striatus is herein redescribed, based on examination of the types and recently collected specimens, and its geographic distribution is updated. This species can be diagnosed from all other northeastern South American congeners by its variable coloration pattern consisting of a yellowish to light brown background with a black lateral band and/or small dark brown spots on sides or uniformly light brown and by the following combination of characters: teeth conical arranged in three to four irregular rows in both jaws; anterior section of infraorbital canal (sensory pores i1 and i3) present; sensory pores s6 paired, 11-23 opercular odontodes; 27-44 interopercular odontodes; seven to eight pectoral-fin branched rays; 36-37 free vertebrae; 12-14 ribs; cleithrum pierced by several foramina; and caudal fin truncate to rounded. Trichomycterus striatus occurs from southern Costa Rica [from the Pirrís (herein reported for the first time), Térraba and Coto River basins] to eastern Panama (in most of the main river basins in both the Pacific and Atlantic versants), being the sole representative of the family in lower Central American waters.


Asunto(s)
Bagres , Animales , Costa Rica , Panamá , Ríos
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