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1.
Bioengineering (Basel) ; 11(9)2024 Aug 26.
Artículo en Inglés | MEDLINE | ID: mdl-39329608

RESUMEN

Electroretinography (ERG) is a non-invasive method of assessing retinal function by recording the retina's response to a brief flash of light. This study focused on optimizing the ERG waveform signal classification by utilizing Short-Time Fourier Transform (STFT) spectrogram preprocessing with a machine learning (ML) decision system. Several window functions of different sizes and window overlaps were compared to enhance feature extraction concerning specific ML algorithms. The obtained spectrograms were employed to train deep learning models alongside manual feature extraction for more classical ML models. Our findings demonstrated the superiority of utilizing the Visual Transformer architecture with a Hamming window function, showcasing its advantage in ERG signal classification. Also, as a result, we recommend the RF algorithm for scenarios necessitating manual feature extraction, particularly with the Boxcar (rectangular) or Bartlett window functions. By elucidating the optimal methodologies for feature extraction and classification, this study contributes to advancing the diagnostic capabilities of ERG analysis in clinical settings.

2.
Bioengineering (Basel) ; 11(9)2024 Sep 19.
Artículo en Inglés | MEDLINE | ID: mdl-39329682

RESUMEN

Optical coherence tomography (OCT) is a non-invasive imaging technique widely used in ophthalmology for visualizing retinal layers, aiding in the early detection and monitoring of retinal diseases. OCT is useful for detecting diseases such as age-related macular degeneration (AMD) and diabetic macular edema (DME), which affect millions of people globally. Over the past decade, the area of application of artificial intelligence (AI), particularly deep learning (DL), has significantly increased. The number of medical applications is also rising, with solutions from other domains being increasingly applied to OCT. The segmentation of biomarkers is an essential problem that can enhance the quality of retinal disease diagnostics. For 3D OCT scans, AI is beneficial since manual segmentation is very labor-intensive. In this paper, we employ the new SAM 2 and MedSAM 2 for the segmentation of OCT volumes for two open-source datasets, comparing their performance with the traditional U-Net. The model achieved an overall Dice score of 0.913 and 0.902 for macular holes (MH) and intraretinal cysts (IRC) on OIMHS and 0.888 and 0.909 for intraretinal fluid (IRF) and pigment epithelial detachment (PED) on the AROI dataset, respectively.

3.
Sci Data ; 11(1): 365, 2024 Apr 11.
Artículo en Inglés | MEDLINE | ID: mdl-38605088

RESUMEN

Optical coherence tomography (OCT) is a non-invasive imaging technique with extensive clinical applications in ophthalmology. OCT enables the visualization of the retinal layers, playing a vital role in the early detection and monitoring of retinal diseases. OCT uses the principle of light wave interference to create detailed images of the retinal microstructures, making it a valuable tool for diagnosing ocular conditions. This work presents an open-access OCT dataset (OCTDL) comprising over 2000 OCT images labeled according to disease group and retinal pathology. The dataset consists of OCT records of patients with Age-related Macular Degeneration (AMD), Diabetic Macular Edema (DME), Epiretinal Membrane (ERM), Retinal Artery Occlusion (RAO), Retinal Vein Occlusion (RVO), and Vitreomacular Interface Disease (VID). The images were acquired with an Optovue Avanti RTVue XR using raster scanning protocols with dynamic scan length and image resolution. Each retinal b-scan was acquired by centering on the fovea and interpreted and cataloged by an experienced retinal specialist. In this work, we applied Deep Learning classification techniques to this new open-access dataset.


Asunto(s)
Aprendizaje Profundo , Retina , Enfermedades de la Retina , Tomografía de Coherencia Óptica , Humanos , Retinopatía Diabética/diagnóstico por imagen , Edema Macular/diagnóstico por imagen , Retina/diagnóstico por imagen , Enfermedades de la Retina/diagnóstico por imagen
4.
Sensors (Basel) ; 23(21)2023 Oct 26.
Artículo en Inglés | MEDLINE | ID: mdl-37960427

RESUMEN

The electroretinogram (ERG) is a clinical test that records the retina's electrical response to light. Analysis of the ERG signal offers a promising way to study different retinal diseases and disorders. Machine learning-based methods are expected to play a pivotal role in achieving the goals of retinal diagnostics and treatment control. This study aims to improve the classification accuracy of the previous work using the combination of three optimal mother wavelet functions. We apply Continuous Wavelet Transform (CWT) on a dataset of mixed pediatric and adult ERG signals and show the possibility of simultaneous analysis of the signals. The modern Visual Transformer-based architectures are tested on a time-frequency representation of the signals. The method provides 88% classification accuracy for Maximum 2.0 ERG, 85% for Scotopic 2.0, and 91% for Photopic 2.0 protocols, which on average improves the result by 7.6% compared to previous work.


Asunto(s)
Visión de Colores , Análisis de Ondículas , Adulto , Humanos , Niño , Electrorretinografía/métodos , Retina/fisiología , Aprendizaje Automático
5.
Comput Methods Programs Biomed ; 190: 105377, 2020 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-32065933

RESUMEN

BACKGROUND AND OBJECTIVE: The influence of biophysical parameters on the formation of microwave radiation of the human head is poorly studied. Existing approaches to modeling microwave radiation of the human head have limitations associated with simplifying the geometry of human anatomy. The article proposes methodological solutions for numerical modeling of microwave radiation of the brain biological tissues using the geometry obtained from MRI data. METHODS: The geometrical characteristics of biological tissues in model are determined using an MRI image of the head. The methodology proposed in the article allows simulation of a human body voxel models performed the Pennes bio-heat transfer equation using the Fenix software package. RESULTS: Modeling evaluations have shown that anatomical tissues heterogeneities on the surface of the head form temperature gradient of up to 2.0 K, and changes of the microwave radiation up to 0.3 K. CONCLUSIONS: Verification data made by IR thermograph practically coincide with the results of numerical modeling. The fluctuations of the brain microwave radiation are not only the result of thermal processes in its tissues, but are determined by the dynamics of its thermoregulation processes and are an indicator of changes in the physiological processes occurring in it.


Asunto(s)
Cabeza/efectos de la radiación , Microondas , Termodinámica , Algoritmos , Simulación por Computador , Humanos , Imagen por Resonancia Magnética , Modelos Biológicos
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