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1.
Pediatr Cardiol ; 2024 Apr 30.
Artículo en Inglés | MEDLINE | ID: mdl-38689021

RESUMEN

Prospective electrocardiogram (ECG)-triggered cardiovascular computed tomography (CCT) is primarily utilized for anatomical information in congenital heart disease (CHD) and has not been utilized for calculation of the end-diastolic volume (EDV); however, the mid-diastolic volume (MDV) may be measured. The objective of this study was to evaluate the feasibility and agreement between ventricular EDV and MDV. 31 retrospectively ECG-gated CCT were analyzed for the study of the 450 consecutive CCT. CCT images were processed using syngo.via with automatic contouring followed by manual adjustment of the endocardial borders of the left ventricles (LV) and right ventricles (RV) at end-diastolic and mid-diastolic phase (measured at 70% of cardiac cycle). The correlation and agreements between EDV and MDV were demonstrated using Spearman rank coefficient and intraclass correlation coefficient (ICC), respectively. Mean age ± SD was 28.8 ± 12.5 years, 19 were male (61.3%) and tetralogy of Fallot (TOF) was the most common diagnosis (58.1%), 35% (11/31) patients with a pacemaker, ICD or other such contraindication for a CMRI, 23% (7/31) with claustrophobia, and 6.5% (2/31) with developmental delay with refusal for sedation did not have a previous CMRI. The mean ± SD indexed LV EDV and LV MDV were 91.1 ± 24.5 and 84.8 ± 22.3 ml/m2, respectively. The mean ± SD indexed RV EDV and RV MDV were 136.8 ± 41 and 130.2 ± 41.5 ml/m2, respectively. EDV and MDV had a strong positive correlation and good agreement (ICC 0.92 for LV and 0.95 for RV). This agreement was preserved in a subset of patients (21) with dilated RV (indexed RV EDV z-score > 2). Intra-observer reliability (0.97 and 0.98 for LV and RV MDV, respectively) and inter-observer reliability (0.96 and 0.90 for LV and RV MDV, respectively) were excellent. In a select group of patients with CHD, measuring MDV by CCT is feasible and these values have good agreements with EDV. This may be used to derive functional data from prospectively ECG-triggered CCT studies. Further large-scale analysis is needed to determine accuracy and clinical correlation.

2.
World J Pediatr Congenit Heart Surg ; 15(1): 133-136, 2024 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-37728165

RESUMEN

Surgical repair of right aortic arch and aberrant left subclavian artery has traditionally involved ligamentum division. Such patients can have stenosis at the origin of the aberrant subclavian artery either at the time of presentation or later. The more recently popularized repair involving resection of Kommerell diverticulum with transfer of the subclavian artery to the left carotid artery allows resection of the stenotic segment and serves as an effective treatment for subclavian stenosis as well. We present three cases of early repair of this arch anomaly with associated subclavian stenosis repaired successfully in that manner.


Asunto(s)
Anomalías Cardiovasculares , Divertículo , Cardiopatías Congénitas , Humanos , Arteria Subclavia/diagnóstico por imagen , Arteria Subclavia/cirugía , Arteria Subclavia/anomalías , Aorta Torácica/diagnóstico por imagen , Aorta Torácica/cirugía , Aorta Torácica/anomalías , Constricción Patológica , Divertículo/complicaciones , Divertículo/diagnóstico por imagen , Divertículo/cirugía , Anomalías Cardiovasculares/complicaciones , Anomalías Cardiovasculares/diagnóstico por imagen , Anomalías Cardiovasculares/cirugía , Cardiopatías Congénitas/complicaciones
3.
J Neurol Surg Rep ; 84(4): e156-e162, 2023 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-38124781

RESUMEN

Introduction Clival tumors are rare and heterogeneous. Although some benign prototypical sellar lesions may present as clival tumors, the likelihood of malignant disease is higher. Here we define a novel algorithm for the workup and management of clival masses through an illustrative case of colorectal adenocarcinoma metastasis to the clivus. Methods In this case report, the best practice guidelines for managing clival masses are described through a literature review and refined by senior author consensus. We conducted a focused systematic review to characterize the present case in the context of clival metastasis from gastrointestinal malignancy. Results An 83-year-old woman presented with 4 weeks of headaches and blurry vision. Examination revealed partial right abducens and left oculomotor palsies. Magnetic resonance imaging (MRI) identified a large, weakly enhancing sellar and clival mass with sphenoid sinus extension. An aggressive subtotal endoscopic endonasal resection was performed with removal of all sphenoid, clival, and sellar disease without cavernous sinus wall resection. Pathology confirmed colorectal adenocarcinoma; computed tomography (CT) imaging identified an ascending colon mass with metastases to the liver and mesenteric nodes. Palliative oncologic therapies were recommended, but she elected hospice, and died 3 months after initial presentation. Gastrointestinal clival metastases are exceedingly rare among sellar and clival pathologies, with eight prior cases reported, most of which presented with diplopia from abducens nerve involvement. Conclusion Clival masses are uncommon skull base lesions that are associated with more aggressive diseases. We present a consolidated framework for decision-making in these challenging patients, alongside an unusual case example that illustrates the importance of increased suspicion for malignant clinical entities in this setting.

4.
JACC Case Rep ; 14: 101839, 2023 May 17.
Artículo en Inglés | MEDLINE | ID: mdl-37152701

RESUMEN

We describe a neonate with a unique variant of truncus arteriosus with interrupted aortic arch, an absent ascending aorta, persistent right dorsal aorta, and an unusual brachiocephalic artery pattern in which all head and neck vessels were supplied from the ductal arch-descending aorta continuum. (Level of Difficulty: Beginner.).

5.
Ann Thorac Surg ; 116(3): 588-597, 2023 09.
Artículo en Inglés | MEDLINE | ID: mdl-35690136

RESUMEN

BACKGROUND: Heart transplantation (HT) is standard therapy for end-stage hypertrophic cardiomyopathy (HCM); however, few studies have described outcomes of older children and young adults with HCM listed for HT. Our objective was to compare waitlist and post-HT outcomes among pediatric and young adult patients with HCM and dilated cardiomyopathy (DCM). METHODS: The Scientific Registry of Transplant Recipients was queried for patients with HCM and DCM listed at ≤25 years of age. Patient characteristics, waitlist and post-HT survival were compared between younger (≤5 years of age) and older (>5 to ≤25 years of age) HCM patients and between HCM and DCM patients. RESULTS: Among 6252 patients listed for HT at ≤25 years of age with DCM and HCM, 3926 and 250 were in the older cohort and 1944 and 132 were in the younger cohort, respectively. Older HCM patients were less likely to be critically ill at listing compared with younger HCM patients (P = .0001). Waitlist mortality was similar between HCM and DCM patients in both age cohorts. Post-HT survival in HCM patients was similar between the age cohorts. In the younger cohort, early post-HT survival was worse in HCM compared with DCM (P = .009), with no difference in long-term survival. Survival was similar between the older cohorts. CONCLUSIONS: Older children and young adults with HCM are less critically ill than the younger cohort and show waitlist and post-HT survival similar to DCM patients. The young children with HCM had worse early posttransplantation survival, though long-term survival was same as DCM.


Asunto(s)
Cardiomiopatía Dilatada , Cardiomiopatía Hipertrófica , Trasplante de Corazón , Humanos , Adulto Joven , Niño , Adolescente , Preescolar , Adulto , Enfermedad Crítica , Cardiomiopatía Hipertrófica/cirugía , Cardiomiopatía Dilatada/cirugía , Listas de Espera
6.
Front Nephrol ; 2: 916308, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-37675024

RESUMEN

Progression of chronic kidney disease (CKD) is a substantial threat because it is associated with reduced healthy life expectancy and quality of life, and increase in economic burden. Research indicates people with nondialysis CKD often have lower physical functioning and that improvement of physical activity may contribute to maintaining renal health. Another issue with the current treatment of CKD is that the synergistic effects of rural depopulation due to aging and uncontrolled rural city sprawling will increase the number of under-served healthcare areas. To ensure the quality of renal health care, hospital integration is desirable, under the condition of reconstruction of the public transport system for physically and socially vulnerable people. Recently, medical and non-medical scientists advocate the challenge of city planning for population health. The links between city design and health such as cardiovascular disease, obesity, type 2 diabetes and mental disorders, have been widely studied, except for renal health. Based on our experience in a Kidney and Lifestyle-related Disease Center, we propose the idea that city planning be prioritized to improve renal health through two main streams: 1) Improve physical status by use of public and active transportation including daily walking and cycling; and 2) Equal accessibility to renal health services. Many countries, including Japan, have enacted plans and public policy initiatives that encourage increased levels of physical activity. We should focus on the impact of such movement on renal as well as general health.

7.
J Neurosci Methods ; 360: 109262, 2021 08 01.
Artículo en Inglés | MEDLINE | ID: mdl-34146592

RESUMEN

BACKGROUND: Functional near-infrared spectroscopy (fNIRS) has been increasingly employed to monitor cerebral hemodynamics in normal and diseased conditions. However, fNIRS suffers from its susceptibility to superficial activity and systemic physiological noise. The objective of the study was to establish a noise reduction method for fNIRS in a whole-head montage. NEW METHOD: We have developed an automated denoising method for whole-head fNIRS. A high-density montage consisting of 109 long-separation channels and 8 short-separation channels was used for recording. Auxiliary sensors were also used to measure motion, respiration and pulse simultaneously. The method incorporates principal component analysis and general linear model to identify and remove a globally uniform superficial component. Our denoising method was evaluated in experimental data acquired from a group of healthy human subjects during a visually cued motor task and further compared with a minimal preprocessing method and three established denoising methods in the literature. Quantitative metrics including contrast-to-noise ratio, within-subject standard deviation and adjusted coefficient of determination were evaluated. RESULTS: After denoising, whole-head topography of fNIRS revealed focal activations concurrently in the primary motor and visual areas. COMPARISON WITH EXISTING METHODS: Analysis showed that our method improves upon the four established preprocessing methods in the literature. CONCLUSIONS: An automatic, effective and robust preprocessing pipeline was established for removing physiological noise in whole-head fNIRS recordings. Our method can enable fNIRS as a reliable tool in monitoring large-scale, network-level brain activities for clinical uses.


Asunto(s)
Encéfalo , Espectroscopía Infrarroja Corta , Encéfalo/diagnóstico por imagen , Mapeo Encefálico , Hemodinámica , Humanos , Modelos Lineales
8.
J Am Soc Nephrol ; 32(5): 1071-1083, 2021 05 03.
Artículo en Inglés | MEDLINE | ID: mdl-33789951

RESUMEN

BACKGROUND: Myeloperoxidase ANCA-associated vasculitis is a major cause of ESKD. Efficacy of anti-CD20 mAb treatment was tested in a mouse model of the disease. METHODS: MPO immunization induced anti-MPO autoimmunity, and a subnephritogenic dose of sheep anti-mouse GBM globulin triggered GN. RESULTS: Anti-CD20 mAb treatment increased the numbers and immunomodulatory capacity of MPO-specific T regulatory cells (Tregs) and attenuated T cell-mediated and humoral anti-MPO autoimmunity and GN. Disabling of Tregs negated the therapeutic benefit of anti-CD20 treatment. The mechanism of enhancement of Treg activity could be attributed to anti-CD20 mAb effects on inducing B cell apoptosis. Administering anti-CD20 mAb-induced apoptotic splenocytes to mice developing anti-MPO GN was as effective as anti-CD20 mAb treatment in inducing Tregs and attenuating both anti-MPO autoimmunity and GN. A nonredundant role for splenic macrophages in mediating the anti-CD20 mAb-induced immunomodulation was demonstrated by showing that administration of anti-CD20 mAb ex vivo-induced apoptotic splenocytes to unmanipulated mice attenuated autoimmunity and GN, whereas deletion of splenic marginal zone macrophages prevented anti-CD20 mAb-induced immunomodulation and treatment efficacy. Six days after administering anti-CD20 mAb to mice with murine anti-MPO GN, cell-mediated anti-MPO responses and GN were attenuated, and Tregs were enhanced, but ANCA levels were unchanged, suggesting humoral autoimmunity was redundant at this time point. CONCLUSIONS: Collectively, these data suggest that, as well as reducing humoral autoimmunity, anti-CD20 mAb more rapidly induces protective anti-MPO Treg-mediated immunomodulation by splenic processing of anti-CD20-induced apoptotic B cells.


Asunto(s)
Vasculitis Asociada a Anticuerpos Citoplasmáticos Antineutrófilos/tratamiento farmacológico , Factores Inmunológicos/uso terapéutico , Rituximab/uso terapéutico , Animales , Vasculitis Asociada a Anticuerpos Citoplasmáticos Antineutrófilos/etiología , Vasculitis Asociada a Anticuerpos Citoplasmáticos Antineutrófilos/patología , Apoptosis , Linfocitos B/efectos de los fármacos , Modelos Animales de Enfermedad , Masculino , Ratones , Peroxidasa , Linfocitos T Reguladores/efectos de los fármacos
9.
Annu Int Conf IEEE Eng Med Biol Soc ; 2020: 948-951, 2020 07.
Artículo en Inglés | MEDLINE | ID: mdl-33018141

RESUMEN

Functional near-infrared spectroscopy (fNIRS) has the potential to become the next common noninvasive neuroimaging technique for routine clinical use. Compared to the current standard for neuroimaging, functional magnetic resonance imaging (fMRI), fNIRS boasts several advantages which increase its likelihood for clinical adoption. However, fNIRS suffers from an intrinsic interference from the superficial tissues, which the near-infrared light must penetrate before reaching the deeper cerebral cortex. Therefore, the removal of signals captured by SS channels has been proposed to attenuate the systematic interference. This study aimed to investigate the task-related systemic artefacts, in a high-density montage covering the sensorimotor cortex. We compared the association between LS and SS channels over the contralateral motor cortex which was activated by a hand clenching task, with that over the ipsilateral cortex where no task-related activation was expected. Our findings provide important guidelines regarding how to removal SS signals in a high-density whole-head montage.


Asunto(s)
Corteza Motora , Espectroscopía Infrarroja Corta , Artefactos , Imagen por Resonancia Magnética , Neuroimagen
10.
PLoS One ; 15(10): e0239282, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-33095778

RESUMEN

OBJECTIVES: To determine if the URO-MCP-1 mouse model for bladder IC/BPS is associated with in vivo bladder hyper-permeability, as measured by contrast-enhanced MRI (CE-MRI), and assess whether molecular-targeted MRI (mt-MRI) can visualize in vivo claudin-2 expression as a result of bladder hyper-permeability. Interstitial cystitis/bladder pain syndrome (IC/BPS) is a chronic, painful condition of the bladder that affects primarily women. It is known that permeability plays a substantial role in IC/BPS. Claudins are tight junction membrane proteins that are expressed in epithelia and endothelia and form paracellular barriers and pores that determine tight junction permeability. Claudin-2 is a molecular marker that is associated with increased hyperpermeability in the urothelium. MATERIALS AND METHODS: CE-MRI was used to measure bladder hyper-permeability in the URO-MCP-1 mice. A claudin-2-specific mt-MRI probe was used to assess in vivo levels of claudin-2. The mt-MRI probe consists of an antibody against claudin-2 conjugated to albumin that had Gd-DTPA (gadolinium diethylenetriamine pentaacetate) and biotin attached. Verification of the presence of the mt-MRI probe was done by targeting the biotin moiety for the probe with streptavidin-horse radish peroxidase (SA-HRP). Trans-epithelial electrical resistance (TEER) was also used to assess bladder permeability. RESULTS: The URO-MCP-1 mouse model for IC/BPS was found to have a significant increase in bladder permeability, following liposaccharide (LPS) exposure, compared to saline-treated controls. mt-MRI- and histologically-detectable levels of the claudin-2 probe were found to increase with LPS -induced bladder urothelial hyper-permeability in the URO-MCP-1 IC mouse model. Levels of protein expression for claudin-2 were confirmed with immunohistochemistry and immunofluorescence imaging. Claudin-2 was also found to highly co-localize with zonula occlidens-1 (ZO-1), a tight junction protein. CONCLUSION: The combination of CE-MRI and TEER approaches were able to demonstrate hyper-permeability, a known feature associated with some IC/BPS patients, in the LPS-exposed URO-MCP-1 mouse model. This MRI approach could be clinically translated to establish which IC/BPS patients have bladder hyper-permeability and help determine therapeutic options. In addition, the in vivo molecular-targeted imaging approach can provide invaluable information to enhance our understanding associated with bladder urothelium hyper-permeability in IC/BPS patients, and perhaps be used to assist in developing further therapeutic strategies.


Asunto(s)
Claudina-2/metabolismo , Cistitis Intersticial/patología , Imagen por Resonancia Magnética/métodos , Sondas Moleculares/química , Vejiga Urinaria/fisiopatología , Animales , Anticuerpos/química , Anticuerpos/inmunología , Claudina-2/inmunología , Cistitis Intersticial/metabolismo , Modelos Animales de Enfermedad , Gadolinio DTPA/química , Inmunohistoquímica , Lipopolisacáridos/toxicidad , Ratones , Permeabilidad/efectos de los fármacos , Albúmina Sérica/química
11.
Nanoscale Adv ; 2(10): 4798-4812, 2020 Oct 13.
Artículo en Inglés | MEDLINE | ID: mdl-36132939

RESUMEN

The use of nanodiamonds for biomedical and consumer applications is growing rapidly. As their use becomes more widespread, so too do concerns around their cytotoxicity. The cytotoxicity of nanodiamonds correlates with their cellular internalisation and circulation time in the body. Both internalisation and circulation time are influenced by the formation of a protein corona on the nanodiamond surface. However, a precise understanding of both how the corona forms and evolves and its influence on cytotoxicity is lacking. Here, we investigated protein corona formation and evolution in response to two classes of nanodiamonds, pristine and aminated, and two types of proteins, bovine serum albumin and fibronectin. Specifically, we found that a corona made of bovine serum albumin (BSA), which represents the most abundant protein in blood plasma, reduced nanodiamond agglomeration. Fibronectin (FN9-10), the second most abundant protein found in the plasma, exhibited a significantly higher nanodiamond binding affinity than BSA, irrespective of the nanodiamond surface charge. Finally, nanodiamonds with a BSA corona displayed less cytotoxicity towards nonphagocytic liver cells. However, regardless of the type of corona (FN9-10 or BSA), both classes of nanodiamonds induced substantial phagocytic cell death. Our results emphasise that a precise understanding of the corona composition is fundamental to determining the fate of nanoparticles in the body.

12.
Annu Int Conf IEEE Eng Med Biol Soc ; 2019: 4779-4782, 2019 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-31946930

RESUMEN

Functional near-infrared spectroscopy (fNIRS) is a non-invasive optical functional neuroimaging that has seen rapid development and increasing use in studying human brain under normal and diseased conditions. Compared with blood-oxygenation-level dependent functional magnetic resonance imaging (BOLD fMRI), fNIRS offers advantages including its low cost, portability and compatibility with implanted medical devices. Thus, fNIRS can be used to monitor brain activity particularly in infants, elders and patients who are unable to undergo routine fMRI scans. However, fNIRS suffers from its susceptibility to scalp and to systemic physiological noises. Fluctuations originated from heartbeat, respiration and low-frequency oscillations lead to contamination of cerebral activity. In order to tap the full potential of fNIRS, it is essential to eliminate these confounding noises from fNIRS measurements. Therefore, the present study aims to understand the underlying relationship between superficial signals and the compound signals respectively measured by short channels and long channels of fNIRS optodes in a whole head configuration. Our results reveal that: 1) 49.56% of total variances in long-channel data are contributed by a global component shared across all long channels; 2) this global component is significantly correlated with the superficial fluctuations extracted from short-channel data. Finally, our findings indicate that compound signals measured by long channels of fNIRS are contaminated by superficial fluctuations and that careful removal of these fluctuations from long-channel data is critical in obtaining accurate images of cerebral activity with fNIRS.


Asunto(s)
Encéfalo , Neuroimagen Funcional , Espectroscopía Infrarroja Corta , Anciano , Encéfalo/diagnóstico por imagen , Encéfalo/fisiopatología , Humanos , Imagen por Resonancia Magnética , Cuero Cabelludo
13.
Langmuir ; 33(18): 4461-4476, 2017 05 09.
Artículo en Inglés | MEDLINE | ID: mdl-28414245

RESUMEN

The molecular structure of a surfactant molecule is known to have a great effect on the interfacial properties and the type of nanostructures formed. In this work, we have performed molecular dynamics simulations on six isomers of an alkyl benzenesulfonate surfactant to investigate the effect of the degree and position of aromatic substitution on the interfacial properties and on the collapse of the surfactant monolayer at a decane-water interface. The surface pressure of the monolayers was shown to increase with increasing surface coverage, until some of the monolayers become mechanically unstable and form large undulations. Shifting the primary alkyl chain of the surfactant from the para to the meta position was found to significantly affect the orientation of the surfactant head groups, while the attachment position of the benzene ring along the primary alkyl chain plays a greater role in the orientation of the surfactant tails. In general, to the extent considered in this work, our results suggest that additional alkyl substitution and meta substitution of the primary alkyl chains increase both the effectiveness and efficiency of the surfactants, and accelerate the onset of monolayer collapse. The interface was found to consist of an inner Helmholtz layer of partially dehydrated counterions in contact with the surfactant head groups, an outer Helmholtz layer of hydrated counterions, and a diffuse layer. The di- and trisubstituted surfactants formed nearly spherical swollen micelles encapsulating pure decane, which effectively solubilizes decane in water as a microemulsion. The monosubstituted surfactants formed elongated buds that protrude from the interface, but did not detach from the monolayer. To our knowledge, the role of aromatic substitution on interfacial properties has not been investigated by molecular simulations previously. The results from this work could provide insights to design improved surfactants by exploiting aromatic substitution to encapsulate material for drug delivery and other applications.

14.
Autism ; 19(7): 774-84, 2015 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-25922445

RESUMEN

Daily living skills (DLS), such as personal hygiene, meal preparation, and money management, are important to independent living. Research suggests that many individuals with autism spectrum disorder exhibit impairments in daily living skills relative to their cognitive skills. This study examined predictors of daily living skills attainment and trajectories of daily living skills in a longitudinal sample referred for possible autism spectrum disorder and followed from 2 to 21 years of age. Consistent with previous studies, participants with autism spectrum disorder and nonspectrum diagnoses showed continual development of daily living skills throughout childhood and adolescence. Early childhood nonverbal mental age was the strongest predictor of daily living skills attainment for both diagnostic groups. Group-based modeling suggested two distinct trajectories of daily living skills development for participants with autism spectrum disorder. Skill levels for both groups of young adults with autism spectrum disorder remained considerably below age level expectations. Whereas the "High-DLS" group gained approximately 12 years in daily living skills from T2 to T21, the "Low-DLS" group's daily living skills improved 3-4 years over the 16- to 19-year study period. Nonverbal mental age, receptive language, and social-communication impairment at 2 years predicted High- versus Low-DLS group membership. Receiving greater than 20 h of parent-implemented intervention before age 3 was also associated with daily living skills trajectory. Results suggest that daily living skills should be a focus of treatment plans for individuals with autism spectrum disorder, particularly adolescents transitioning to young adulthood.


Asunto(s)
Actividades Cotidianas/psicología , Trastorno del Espectro Autista/psicología , Adolescente , Trastorno del Espectro Autista/diagnóstico , Trastorno del Espectro Autista/terapia , Niño , Preescolar , Femenino , Desarrollo Humano , Humanos , Pruebas de Inteligencia , Pruebas del Lenguaje , Estudios Longitudinales , Masculino , Índice de Severidad de la Enfermedad , Adulto Joven
15.
J Phys Chem B ; 119(1): 316-29, 2015 Jan 08.
Artículo en Inglés | MEDLINE | ID: mdl-25434738

RESUMEN

The dynamics of amphiphilic peptide-mimicking polycarbonate polymers are investigated, considering variations in polymer length, monomer sequence, and monomer modification. The polymers are simulated in aqueous solution with atomistic molecular dynamics simulations and an empirical force field. Various structural polymer properties, interaction strengths, and solvation free energies are derived. It is found that water is a less favorable solvent for these polymers than for peptides. Moreover, polymers readily adopt irreversibly a compact state that consists of a variety of distinct compact conformations that are adopted through frequent transitions. Furthermore, the polymers exhibit a strong propensity to form large aggregates. The driving forces for these processes appear to be a hydrophobic effect and more favorable polymer-solvent interactions of aggregates that overcome the otherwise strong mutual repulsion between the positively charged polymers. Replacing hydrophobic residues with polar side chains destabilizes the compact conformations of the polymers. Our results also indicate that the monomer sequence has little effect on the overall solvation properties of the polymer molecule. However, the sequence influences flexibility and compactness of the monomer in solution. Overall, the results of this work confirm the protein-like characteristics of these polymers and elucidate the role of single residues in influencing the structure and aggregation in aqueous solution.


Asunto(s)
Simulación de Dinámica Molecular , Cemento de Policarboxilato/química , Agua/química , Interacciones Hidrofóbicas e Hidrofílicas , Estructura Molecular , Programas Informáticos
16.
J Phys Chem B ; 118(35): 10444-59, 2014 Sep 04.
Artículo en Inglés | MEDLINE | ID: mdl-25153890

RESUMEN

The impact of five different imidazolium-based ionic liquids (ILs) diluted in water on the properties of a bacterial plasma membrane is investigated using molecular dynamics (MD) simulations. Cations considered are 1-octyl-3-methylimidazolium (OMIM), 1-octyloxymethyl-3-methylimidazolium (OXMIM), and 1-tetradecyl-3-methylimidazolium (TDMIM), as well as the anions chloride and lactate. The atomistic model of the membrane bilayer is designed to reproduce the lipid composition of the plasma membrane of Gram-negative Escherichia coli. Spontaneous insertion of cations into the membrane is observed in all ILs. Substantially more insertions of OMIM than of OXMIM occur and the presence of chloride reduces cation insertions compared to lactate. In contrast, anions do not adsorb onto the membrane surface nor diffuse into the bilayer. Once inserted, cations are oriented in parallel to membrane lipids with cation alkyl tails embedded into the hydrophobic membrane core, while the imidazolium-ring remains mostly exposed to the solvent. Such inserted cations are strongly associated with one to two phospholipids in the membrane. The overall order of lipids decreased after OMIM and OXMIM insertions, while on the contrary the order of lipids in the vicinity of TDMIM increased. The short alkyl tails of OMIM and OXMIM generate voids in the bilayer that are filled by curling lipids. This cation induced lipid disorder also reduces the average membrane thickness. This effect is not observed after TDMIM insertions due to the similar length of cation alkyl chain and the fatty acids of the lipids. This lipid-mimicking behavior of inserted TDMIM indicates a high membrane affinity of this cation that could lead to an enhanced accumulation of cations in the membrane over time. Overall, the simulations reveal how cations are inserted into the bacterial membrane and how such insertions change its properties. Moreover, the different roles of cations and anions are highlighted and the fundamental importance of cation alkyl chain length and its functionalization is demonstrated.


Asunto(s)
Membrana Celular/química , Líquidos Iónicos/química , Solventes/química , Agua/química , Aniones/química , Cationes/química , Cloruros/química , Deuterio/química , Difusión , Escherichia coli , Ácidos Grasos/química , Imidazoles/química , Ácido Láctico/química , Membrana Dobles de Lípidos/química , Simulación de Dinámica Molecular , Estructura Molecular , Fosfolípidos/química
17.
Proc Natl Acad Sci U S A ; 110(2): 519-24, 2013 Jan 08.
Artículo en Inglés | MEDLINE | ID: mdl-23267112

RESUMEN

The self-assembly of abnormally folded proteins into amyloid fibrils is a hallmark of many debilitating diseases, from Alzheimer's and Parkinson diseases to prion-related disorders and diabetes type II. However, the fundamental mechanism of amyloid aggregation remains poorly understood. Core sequences of four to seven amino acids within natural amyloid proteins that form toxic fibrils have been used to study amyloidogenesis. We recently reported a class of systematically designed ultrasmall peptides that self-assemble in water into cross-ß-type fibers. Here we compare the self-assembly of these peptides with natural core sequences. These include core segments from Alzheimer's amyloid-ß, human amylin, and calcitonin. We analyzed the self-assembly process using circular dichroism, electron microscopy, X-ray diffraction, rheology, and molecular dynamics simulations. We found that the designed aliphatic peptides exhibited a similar self-assembly mechanism to several natural sequences, with formation of α-helical intermediates being a common feature. Interestingly, the self-assembly of a second core sequence from amyloid-ß, containing the diphenylalanine motif, was distinctly different from all other examined sequences. The diphenylalanine-containing sequence formed ß-sheet aggregates without going through the α-helical intermediate step, giving a unique fiber-diffraction pattern and simulation structure. Based on these results, we propose a simplified aliphatic model system to study amyloidosis. Our results provide vital insight into the nature of early intermediates formed and suggest that aromatic interactions are not as important in amyloid formation as previously postulated. This information is necessary for developing therapeutic drugs that inhibit and control amyloid formation.


Asunto(s)
Proteínas Amiloidogénicas/química , Amiloidosis/metabolismo , Modelos Moleculares , Péptidos/química , Conformación Proteica , Secuencia de Aminoácidos , Amiloide , Proteínas Amiloidogénicas/genética , Calcitonina , Dicroismo Circular , Humanos , Microscopía Electrónica de Rastreo , Simulación de Dinámica Molecular , Datos de Secuencia Molecular , Péptidos/genética , Reología , Difracción de Rayos X
18.
J Chem Phys ; 139(24): 244506, 2013 Dec 28.
Artículo en Inglés | MEDLINE | ID: mdl-24387381

RESUMEN

The partial molar volumes, V(i), of the gas solutes H2, CO, and CO2, solvated in acetone, methanol, heptane, and diethylether are determined computationally in the limit of infinite dilution and standard conditions. Solutions are described with molecular dynamics simulations in combination with the OPLS-aa force field for solvents and customized force field for solutes. V(i) is determined with the direct method, while the composition of V(i) is studied with Kirkwood-Buff integrals (KBIs). Subsequently, the amount of unoccupied space and size of pre-formed cavities in pure solvents is determined. Additionally, the shape of individual solvent cages is analyzed. Calculated V(i) deviate only 3.4 cm(3) mol(-1) (7.1%) from experimental literature values. Experimental V(i) variations across solutions are reproduced qualitatively and also quantitatively in most cases. The KBI analysis identifies differences in solute induced solvent reorganization in the immediate vicinity of H2 (<0.7 nm) and solvent reorganization up to the third solvation shell of CO and CO2 (<1.6 nm) as the origin of V(i) variations. In all solutions, larger V(i) are found in solvents that exhibit weak internal interactions, low cohesive energy density and large compressibility. Weak internal interactions facilitate solvent displacement by thermal solute movement, which enhances the size of solvent cages and thus V(i). Additionally, attractive electrostatic interactions of CO2 and the solvents, which do not depend on internal solvent interactions only, partially reversed the V(i) trends observed in H2 and CO solutions where electrostatic interactions with the solvents are absent. More empty space and larger pre-formed cavities are found in solvents with weak internal interactions, however, no evidence is found that solutes in any considered solvent are accommodated in pre-formed cavities. Individual solvent cages are found to be elongated in the negative direction of solute movement. This wake behind the moving solute is more pronounced in case of mobile H2 and in solvents with weaker internal interactions. However, deviations from a spherical solvent cage shape do not influence solute-solvent radial distribution functions after averaging over all solvent cage orientations and hence do not change V(i). Overall, the applied methodology reproduces V(i) and its variations reliably and the used V(i) decompositions identify the underlying reasons behind observed V(i) variations.

19.
Langmuir ; 28(36): 13008-17, 2012 Sep 11.
Artículo en Inglés | MEDLINE | ID: mdl-22891705

RESUMEN

The epicuticle is the outermost layer of the human hair, and consists of a monolayer of fatty acids that is predominantly 18-methyleicosanoic acid (18-MEA) covalently bound to a protein matrix. Surprisingly, despite the clear scientific and industrial importance, the detailed molecular structure of this fatty acid layer is still poorly understood. In this work, we aim to gain insight into the structure of this so-called F-layer by performing molecular dynamics simulations on a simplified hair surface model consisting of a monolayer of 18-MEA covalently attached to graphene sheets at various separation distances. The relative free energy of the fatty acid layer was calculated as a function of separation distance in order to obtain the optimal packing density of the fatty acids. Conformational properties such as the thickness, tilt angle, and order parameter of the fatty acid layers were also calculated to characterize the structure of the F-layer. Simulations of the structurally similar eicosanoic acid (EA) were also performed as a comparison and to investigate the role of the anteiso-methyl side chain at the 18th position of 18-MEA. The degree of water penetration into the fatty acid layer at the various separation distances was also investigated. Our simulations suggest that the optimal spacing for the fatty acids is between 0.492 and 0.651 nm, in contrast to the generally accepted literature value of around 0.9-1.0 nm. This results in a packing density of between 0.21 and 0.37 nm(2) per fatty acid molecule and a thickness of around 2.01-2.64 nm. We also show that, at larger separation distances, the 18-MEA fatty acid provides a slightly better hydrophobic layer than the EA fatty acid, suggesting that the 18-MEA fatty acid may have been naturally selected to provide better protection for the hair when it loses some of the fatty acids due to daily wear and tear. To our knowledge, this is the first attempt to systematically investigate the hair surface structure and properties with molecular simulations.


Asunto(s)
Ácidos Eicosanoicos/química , Cabello/química , Liposomas/química , Simulación de Dinámica Molecular , Humanos , Modelos Moleculares , Estructura Molecular , Propiedades de Superficie
20.
PLoS One ; 7(6): e39854, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22768145

RESUMEN

Predicting the trajectories of moving objects in our surroundings is important for many life scenarios, such as driving, walking, reaching, hunting and combat. We determined human subjects' performance and task-related brain activity in a motion trajectory prediction task. The task required spatial and motion working memory as well as the ability to extrapolate motion information in time to predict future object locations. We showed that the neural circuits associated with motion prediction included frontal, parietal and insular cortex, as well as the thalamus and the visual cortex. Interestingly, deactivation of many of these regions seemed to be more closely related to task performance. The differential activity during motion prediction vs. direct observation was also correlated with task performance. The neural networks involved in our visual motion prediction task are significantly different from those that underlie visual motion memory and imagery. Our results set the stage for the examination of the effects of deficiencies in these networks, such as those caused by aging and mental disorders, on visual motion prediction and its consequences on mobility related daily activities.


Asunto(s)
Mapeo Encefálico , Percepción de Movimiento/fisiología , Percepción Visual/fisiología , Adulto , Sensibilidad de Contraste , Femenino , Humanos , Masculino , Análisis y Desempeño de Tareas
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