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1.
Photosynth Res ; 124(2): 131-5, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25829026

RESUMEN

UNLABELLED: On January 16, 2015, Professor Andrew Alm Benson, one of the leading plant biochemists of the twentieth century, died in La Jolla, California, at the age of 97; he was born on September 24, 1917. Benson was known especially for his pioneering studies on photosynthesis (CO2 assimilation, carbon reduction cycle) and plant lipids (phospholipid phosphatidyl glycerol; and the sulfolipid, sulfoquinovosyl diglyceride). A photograph of Benson is shown in Fig. 1. Fig. 1 Photograph of Andrew A. Benson. SOURCE: Annual Review of Plant Biology, Vol. 53, 2002, published with permission.


Asunto(s)
Bioquímica/historia , Fotosíntesis , Distinciones y Premios , Historia del Siglo XX , Historia del Siglo XXI , Lípidos/historia , Plantas/metabolismo , Estados Unidos
2.
Photosynth Res ; 123(2): 115-6, 2015 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-25373526

RESUMEN

We present a brief account of the 97th birthday celebration of Andrew A. Benson, a scientific legend who is known, among other contributions, for his pioneering work on the path of carbon in photosynthesis (the Calvin-Benson cycle).


Asunto(s)
Distinciones y Premios , Fotosíntesis , Lectinas de Plantas/fisiología
3.
Proc Natl Acad Sci U S A ; 111(43): E4560-7, 2014 Oct 28.
Artículo en Inglés | MEDLINE | ID: mdl-25313036

RESUMEN

In animal and plant cells, the ATP/ADP ratio and/or energy charge are generally considered key parameters regulating metabolism and respiration. The major alternative issue of whether the cytosolic and mitochondrial concentrations of ADP and ATP directly mediate cell respiration remains unclear, however. In addition, because only free nucleotides are exchanged by the mitochondrial ADP/ATP carrier, whereas MgADP is the substrate of ATP synthase (EC 3.6.3.14), the cytosolic and mitochondrial Mg(2+) concentrations must be considered as well. Here we developed in vivo/in vitro techniques using (31)P-NMR spectroscopy to simultaneously measure these key components in subcellular compartments. We show that heterotrophic sycamore (Acer pseudoplatanus L.) cells incubated in various nutrient media contain low, stable cytosolic ADP and Mg(2+) concentrations, unlike ATP. ADP is mainly free in the cytosol, but complexed by Mg(2+) in the mitochondrial matrix, where [Mg(2+)] is tenfold higher. In contrast, owing to a much higher affinity for Mg(2+), ATP is mostly complexed by Mg(2+) in both compartments. Mg(2+) starvation used to alter cytosolic and mitochondrial [Mg(2+)] reversibly increases free nucleotide concentration in the cytosol and matrix, enhances ADP at the expense of ATP, decreases coupled respiration, and stops cell growth. We conclude that the cytosolic ADP concentration, and not ATP, ATP/ADP ratio, or energy charge, controls the respiration of plant cells. The Mg(2+) concentration, remarkably constant and low in the cytosol and tenfold higher in the matrix, mediates ADP/ATP exchange between the cytosol and matrix, [MgADP]-dependent mitochondrial ATP synthase activity, and cytosolic free ADP homeostasis.


Asunto(s)
Acer/citología , Adenosina Difosfato/metabolismo , Adenosina Trifosfato/metabolismo , Citosol/metabolismo , Magnesio/metabolismo , Mitocondrias/metabolismo , Compartimento Celular , Extractos Celulares , Respiración de la Célula , Homeostasis , Espectroscopía de Resonancia Magnética , Modelos Biológicos , Células Vegetales/metabolismo
4.
J Biol Chem ; 287(26): 22367-76, 2012 Jun 22.
Artículo en Inglés | MEDLINE | ID: mdl-22577137

RESUMEN

Glutamine amidotransferase/aminodeoxychorismate synthase (GAT-ADCS) is a bifunctional enzyme involved in the synthesis of p-aminobenzoate, a central component part of folate cofactors. GAT-ADCS is found in eukaryotic organisms autonomous for folate biosynthesis, such as plants or parasites of the phylum Apicomplexa. Based on an automated screening to search for new inhibitors of folate biosynthesis, we found that rubreserine was able to inhibit the glutamine amidotransferase activity of the plant GAT-ADCS with an apparent IC(50) of about 8 µM. The growth rates of Arabidopsis thaliana, Toxoplasma gondii, and Plasmodium falciparum were inhibited by rubreserine with respective IC(50) values of 65, 20, and 1 µM. The correlation between folate biosynthesis and growth inhibition was studied with Arabidopsis and Toxoplasma. In both organisms, the folate content was decreased by 40-50% in the presence of rubreserine. In both organisms, the addition of p-aminobenzoate or 5-formyltetrahydrofolate in the external medium restored the growth for inhibitor concentrations up to the IC(50) value, indicating that, within this range of concentrations, rubreserine was specific for folate biosynthesis. Rubreserine appeared to be more efficient than sulfonamides, antifolate drugs known to inhibit the invasion and proliferation of T. gondii in human fibroblasts. Altogether, these results validate the use of the bifunctional GAT-ADCS as an efficient drug target in eukaryotic cells and indicate that the chemical structure of rubreserine presents interesting anti-parasitic (toxoplasmosis, malaria) potential.


Asunto(s)
Ácido 4-Aminobenzoico/farmacología , Apicomplexa/metabolismo , Ácido Fólico/metabolismo , Fisostigmina/análogos & derivados , Extractos Vegetales/farmacología , Animales , Antiparasitarios/farmacología , Arabidopsis/metabolismo , Relación Dosis-Respuesta a Droga , Escherichia coli/metabolismo , Concentración 50 Inhibidora , Cinética , Modelos Químicos , Fisostigmina/farmacología , Fitoterapia/métodos , Plasmodium falciparum/metabolismo , Proteínas Recombinantes/metabolismo , Toxoplasma/metabolismo
5.
New Phytol ; 189(1): 135-47, 2011 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20819175

RESUMEN

• In plant cells, sugar starvation triggers a cascade of effects at the scale of 1-2 days. However, very early metabolic response has not yet been investigated. • Soluble phosphorus (P) compounds and intracellular pHs were analysed each 2.5 min intervals in heterotrophic sycamore (Acer pseudoplatanus) cells using in vivo phosphorus nuclear magnetic resonance ((31)P-NMR). • Upon external-sugar withdrawal, the glucose 6-P concentration dropped in the cytosol, but not in plastids. The released inorganic phosphate (Pi) accumulated transiently in the cytosol before influx into the vacuole; nucleotide triphosphate concentration doubled, intracellular pH increased and cell respiration decreased. It was deduced that the cytosolic free-sugar concentration was low, corresponding to only 0.5 mM sucrose in sugar-supplied cells. • The release of sugar from the vacuole and from plastids is insufficient to fully sustain the cell metabolism during starvation, particularly in the very short term. Similarly to Pi-starvation, the cell's first response to sugar starvation occurs in the cytosol and is of a metabolic nature. Unlike the cytoplasm, cytosolic homeostasis is not maintained during starvation. The important metabolic changes following cytosolic sugar exhaustion deliver early endogenous signals that may contribute to trigger rescue metabolism.


Asunto(s)
Acer/fisiología , Metabolismo de los Hidratos de Carbono , Carbono/metabolismo , Citosol/metabolismo , Fosfatos/metabolismo , Acer/metabolismo , Metabolismo Energético , Concentración de Iones de Hidrógeno , Resonancia Magnética Nuclear Biomolecular , Fosforilación , Factores de Tiempo
6.
Plant Physiol ; 151(3): 1646-57, 2009 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-19755536

RESUMEN

In vivo (31)P-NMR analyses showed that the phosphate (Pi) concentration in the cytosol of sycamore (Acer pseudoplatanus) and Arabidopsis (Arabidopsis thaliana) cells was much lower than the cytoplasmic Pi concentrations usually considered (60-80 mum instead of >1 mm) and that it dropped very rapidly following the onset of Pi starvation. The Pi efflux from the vacuole was insufficient to compensate for the absence of external Pi supply, suggesting that the drop of cytosolic Pi might be the first endogenous signal triggering the Pi starvation rescue metabolism. Successive short sequences of Pi supply and deprivation showed that added Pi transiently accumulated in the cytosol, then in the stroma and matrix of organelles bounded by two membranes (plastids and mitochondria, respectively), and subsequently in the vacuole. The Pi analog methylphosphonate (MeP) was used to analyze Pi exchanges across the tonoplast. MeP incorporated into cells via the Pi carrier of the plasma membrane; it accumulated massively in the cytosol and prevented Pi efflux from the vacuole. This blocking of vacuolar Pi efflux was confirmed by in vitro assays with purified vacuoles. Subsequent incorporation of Pi into the cells triggered a massive transfer of MeP from the cytosol to the vacuole. Mechanisms for Pi exchanges across the tonoplast are discussed in the light of the low cytosolic Pi level, the cell response to Pi starvation, and the Pi/MeP interactive effects.


Asunto(s)
Acer/metabolismo , Arabidopsis/metabolismo , Citosol/metabolismo , Compuestos Organofosforados/metabolismo , Fosfatos/metabolismo , Acer/citología , Arabidopsis/citología , Transporte Biológico Activo , Espectroscopía de Resonancia Magnética , Vacuolas/metabolismo
7.
Plant Cell Environ ; 32(1): 82-92, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-19021881

RESUMEN

Metabolic profiling using phosphorus nuclear magnetic resonance ((31)P-NMR) revealed that the leaves of different herbs and trees accumulate 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEcDP), an intermediate of the methylerythritol 4-phosphate (MEP) pathway, during bright and hot days. In spinach (Spinacia oleracea L.) leaves, its accumulation closely depended on irradiance and temperature. MEcDP was the only (31)P-NMR-detected MEP pathway intermediate. It remained in chloroplasts and was a sink for phosphate. The accumulation of MEcDP suggested that its conversion rate into 4-hydroxy-3-methylbut-2-enyl diphosphate, catalysed by (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase (GcpE), was limiting under oxidative stress. Indeed, O(2) and ROS produced by photosynthesis damage this O(2)-hypersensitive [4Fe-4S]-protein. Nevertheless, as isoprenoid synthesis was not inhibited, damages were supposed to be continuously repaired. On the contrary, in the presence of cadmium that reinforced MEcDP accumulation, the MEP pathway was blocked. In vitro studies showed that Cd(2+) does not react directly with fully assembled GcpE, but interferes with its reconstitution from recombinant GcpE apoprotein and prosthetic group. Our results suggest that MEcDP accumulation in leaves may originate from both GcpE sensitivity to oxidative environment and limitations of its repair. We propose a model wherein GcpE turnover represents a bottleneck of the MEP pathway in plant leaves simultaneously exposed to high irradiance and hot temperature.


Asunto(s)
Eritritol/análogos & derivados , Metaboloma , Hojas de la Planta/metabolismo , Fosfatos de Azúcar/metabolismo , Terpenos/metabolismo , Transferasas Alquil y Aril/metabolismo , Cadmio/metabolismo , Eritritol/biosíntesis , Eritritol/metabolismo , Calor , Proteínas Hierro-Azufre/metabolismo , Luz , Estrés Oxidativo , Proteínas de Plantas/metabolismo , Spinacia oleracea/enzimología
8.
New Phytol ; 182(1): 137-145, 2009.
Artículo en Inglés | MEDLINE | ID: mdl-19076298

RESUMEN

* Tetrahydrofolate derivatives are central cofactors of C1 metabolism. Using methotrexate as a specific inhibitor of folate biosynthesis, we altered the folate status in 10-d-old etiolated pea (Pisum sativum) leaves and followed the rate of chlorophyll synthesis upon illumination. * In our conditions, the folate concentration decreased only from 5.7 to 4.2 nmol g(-1) FW, but the amount of chlorophyll after 24 h of illumination was reduced 2.5 times. Folate status and rate of chlorophyll synthesis were apparently correlated through the methyl cycle. * Indeed, we observed that methyl-tetrahydrofolate was the folate derivative most affected by the treatment; the decrease of methyl-tetrahydrofolate was associated with a sharp rise in homocysteine and S-adenosylhomocysteine concentrations, which are normally maintained at very low values, shifting the methylation index (S-adenosylmethionine/S-adenosylhomocysteine ratio) from 7 to 1; the decrease of the methylation index reduced by a factor of 3 the activity of the Mg-protoporphyrin IX methyltransferase (CHLM), an essential enzyme for chlorophyll synthesis. CHLM gene expression and protein concentration remained unchanged, suggesting that this inhibition relied essentially on metabolic regulation. * These results point out that an even moderate change in the folate status may affect plant development and adaptation.


Asunto(s)
Arabidopsis/enzimología , Carbono/metabolismo , Clorofila/biosíntesis , Ácido Fólico/metabolismo , Metiltransferasas/metabolismo , Pisum sativum/enzimología , Arabidopsis/efectos de los fármacos , Arabidopsis/efectos de la radiación , Luz , Metotrexato/farmacología , Metilación/efectos de los fármacos , Metilación/efectos de la radiación , Pisum sativum/efectos de los fármacos , Pisum sativum/efectos de la radiación , Hojas de la Planta/efectos de los fármacos , Hojas de la Planta/enzimología , Hojas de la Planta/efectos de la radiación , Tetrahidrofolatos/química , Tetrahidrofolatos/metabolismo
10.
Photosynth Res ; 92(2): 225-44, 2007 May.
Artículo en Inglés | MEDLINE | ID: mdl-17558548

RESUMEN

Chloroplasts are bounded by a pair of outer membranes, the envelope, that is the only permanent membrane structure of the different types of plastids. Chloroplasts have had a long and complex evolutionary past and integration of the envelope membranes in cellular functions is the result of this evolution. Plastid envelope membranes contain a wide diversity of lipids and terpenoid compounds serving numerous biochemical functions and the flexibility of their biosynthetic pathways allow plants to adapt to fluctuating environmental conditions (for instance phosphate deprivation). A large body of knowledge has been generated by proteomic studies targeted to envelope membranes, thus revealing an unexpected complexity of this membrane system. For instance, new transport systems for metabolites and ions have been identified in envelope membranes and new routes for the import of chloroplast-specific proteins have been identified. The picture emerging from our present understanding of plastid envelope membranes is that of a key player in plastid biogenesis and the co-ordinated gene expression of plastid-specific protein (owing to chlorophyll precursors), of a major hub for integration of metabolic and ionic networks in cell metabolism, of a flexible system that can divide, produce dynamic extensions and interact with other cell constituents. Envelope membranes are indeed one of the most complex and dynamic system within a plant cell. In this review, we present an overview of envelope constituents together with recent insights into the major functions fulfilled by envelope membranes and their dynamics within plant cells.


Asunto(s)
Cloroplastos/metabolismo , Citosol/metabolismo , Membranas Intracelulares/metabolismo , Plantas/metabolismo , Núcleo Celular/metabolismo , Clorofila/biosíntesis , Glicéridos/metabolismo , Metabolismo de los Lípidos/fisiología , Proteínas de la Membrana/metabolismo , Terpenos/metabolismo
11.
Photosynth Res ; 92(2): 149-62, 2007 May.
Artículo en Inglés | MEDLINE | ID: mdl-17464574

RESUMEN

This last decade, many efforts were undertaken to understand how coenzymes, including vitamins, are synthesized in plants. Surprisingly, these metabolic pathways were often "quartered" between different compartments of the plant cell. Among these compartments, mitochondria often appear to have a key role, catalyzing one or several steps in these pathways. In the present review we will illustrate these new and important biosynthetic functions found in plant mitochondria by describing the most recent findings about the synthesis of two vitamins (folate and biotin) and one non-vitamin coenzyme (lipoate). The complexity of these metabolic routes raise intriguing questions, such as how the intermediate metabolites and the end-product coenzymes are exchanged between the various cellular territories, or what are the physiological reasons, if any, for such compartmentalization.


Asunto(s)
Biotina/biosíntesis , Ácido Fólico/biosíntesis , Mitocondrias/metabolismo , Plantas/metabolismo , Ácido Tióctico/biosíntesis , Citosol/metabolismo , Ácidos Grasos/biosíntesis , Ácido Fólico/química , Tetrahidrofolatos/biosíntesis , Ácido Tióctico/química
12.
Proc Natl Acad Sci U S A ; 103(42): 15687-92, 2006 Oct 17.
Artículo en Inglés | MEDLINE | ID: mdl-17030798

RESUMEN

Despite recent progress in elucidating the regulation of methionine (Met) synthesis, little is known about the catabolism of this amino acid in plants. In this article, we present several lines of evidence indicating that the cleavage of Met catalyzed by Met gamma-lyase is the first step in this process. First, we cloned an Arabidopsis cDNA coding a functional Met gamma-lyase (AtMGL), a cytosolic enzyme catalyzing the conversion of Met into methanethiol, alpha-ketobutyrate, and ammonia. AtMGL is present in all of the Arabidopsis organs and tissues analyzed, except in quiescent dry mature seeds, thus suggesting that AtMGL is involved in the regulation of Met homeostasis in various situations. Also, we demonstrated that the expression of AtMGL was induced in Arabidopsis cells in response to high Met levels, probably to bypass the elevated Km of the enzyme for Met. Second, [13C]-NMR profiling of Arabidopsis cells fed with [13C]Met allowed us to identify labeled S-adenosylmethionine, S-methylmethionine, S-methylcysteine (SMC), and isoleucine (Ile). The unexpected production of SMC and Ile was directly associated to the function of Met gamma-lyase. Indeed, we showed that part of the methanethiol produced during Met cleavage could react with an activated form of serine to produce SMC. The second product of Met cleavage, alpha-ketobutyrate, entered the pathway of Ile synthesis in plastids. Together, these data indicate that Met catabolism in Arabidopsis cells is initiated by a gamma-cleavage process and can result in the formation of the essential amino acid Ile and a potential storage form for sulfide or methyl groups, SMC.


Asunto(s)
Arabidopsis/metabolismo , Liasas de Carbono-Azufre/metabolismo , Cisteína/análogos & derivados , Isoleucina/biosíntesis , Metionina/metabolismo , Alquinos/metabolismo , Arabidopsis/citología , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Liasas de Carbono-Azufre/genética , Cisteína/biosíntesis , Glicina/análogos & derivados , Glicina/metabolismo , Resonancia Magnética Nuclear Biomolecular , Compuestos de Sulfonilurea/metabolismo
13.
Plant Physiol ; 139(4): 1666-76, 2005 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-16299174

RESUMEN

Biochemical and molecular characterization of the biotin biosynthetic pathway in plants has dealt primarily with biotin synthase. This enzyme catalyzing the last step of the pathway is localized in mitochondria. Other enzymes of the pathway are however largely unknown. In this study, a genomic-based approach allowed us to clone an Arabidopsis (Arabidopsis thaliana) cDNA coding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway, which we named AtbioF. The function of the enzyme was demonstrated by functional complementation of an Escherichia coli mutant deficient in KAPA synthase reaction, and by measuring in vitro activity. Overproduction and purification of recombinant AtbioF protein enabled a thorough characterization of the kinetic properties of the enzyme and a spectroscopic study of the enzyme interaction with its substrates and product. This is the first characterization of a KAPA synthase reaction in eukaryotes. Finally, both green fluorescent protein-targeting experiments and western-blot analyses showed that the Arabidopsis KAPA synthase is present in cytosol, thus revealing a unique compartmentation of the plant biotin synthesis, split between cytosol and mitochondria. The significance of the complex compartmentation of biotin synthesis and utilization in the plant cell and its potential importance in the regulation of biotin metabolism are also discussed.


Asunto(s)
Arabidopsis/metabolismo , Biotina/biosíntesis , Transaminasas/metabolismo , Secuencia de Aminoácidos , Aminoácidos/metabolismo , Arabidopsis/enzimología , Arabidopsis/genética , Clonación Molecular , Citosol/enzimología , ADN de Plantas/genética , Genes de Plantas , Prueba de Complementación Genética , Cinética , Modelos Biológicos , Datos de Secuencia Molecular , Plantas Modificadas Genéticamente , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Homología de Secuencia de Aminoácido
14.
J Biol Chem ; 279(21): 22548-57, 2004 May 21.
Artículo en Inglés | MEDLINE | ID: mdl-15024005

RESUMEN

The subcellular distribution of Met and S-adenosylmethionine (AdoMet) metabolism in plant cells discloses a complex partition between the cytosol and the organelles. In the present work we show that Arabidopsis contains three functional isoforms of vitamin B(12)-independent methionine synthase (MS), the enzyme that catalyzes the methylation of homocysteine to Met with 5-methyltetrahydrofolate as methyl group donor. One MS isoform is present in chloroplasts and is most likely required to methylate homocysteine that is synthesized de novo in this compartment. Thus, chloroplasts are autonomous and are the unique site for de novo Met synthesis in plant cells. The additional MS isoforms are present in the cytosol and are most probably involved in the regeneration of Met from homocysteine produced in the course of the activated methyl cycle. Although Met synthesis can occur in chloroplasts, there is no evidence that AdoMet is synthesized anywhere but the cytosol. In accordance with this proposal, we show that AdoMet is transported into chloroplasts by a carrier-mediated facilitated diffusion process. This carrier is able to catalyze the uniport uptake of AdoMet into chloroplasts as well as the exchange between cytosolic AdoMet and chloroplastic AdoMet or S-adenosylhomocysteine. The obvious function for the carrier is to sustain methylation reactions and other AdoMet-dependent functions in chloroplasts and probably to remove S-adenosylhomocysteine generated in the stroma by methyltransferase activities. Therefore, the chloroplastic AdoMet carrier serves as a link between cytosolic and chloroplastic one-carbon metabolism.


Asunto(s)
Cloroplastos/metabolismo , Citosol/metabolismo , Metionina/química , Metionina/metabolismo , S-Adenosilmetionina/química , Arabidopsis/metabolismo , Western Blotting , Clonación Molecular , ADN Complementario/metabolismo , Difusión , Relación Dosis-Respuesta a Droga , Escherichia coli/metabolismo , Proteínas Fluorescentes Verdes , Homocisteína/química , Immunoblotting , Cinética , Proteínas Luminiscentes/metabolismo , Mitocondrias/metabolismo , Modelos Biológicos , Datos de Secuencia Molecular , Pisum sativum , Filogenia , Plastidios/metabolismo , Isoformas de Proteínas , Factores de Tiempo , Vitamina B 12/metabolismo
15.
Biochem J ; 379(Pt 3): 601-7, 2004 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-14750903

RESUMEN

GPX-PDE (glycerophosphodiester phosphodiesterase; EC 3.1.4.46) is a relatively poorly characterized enzyme that catalyses the hydrolysis of various glycerophosphodiesters (glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, glycerophosphoserine and bis-glycerophosphoglycerol), releasing sn-glycerol 3-phosphate and the corresponding alcohol. In a previous study, we demonstrated the existence of a novel GPX-PDE in the cell walls and vacuoles of plant cells. Since no GPX-PDE had been identified in any plant organism, the purification of GPX-PDE from carrot cell walls was attempted. After extraction of cell wall proteins from carrot cell suspension cultures with CaCl2, GPX-PDE was purified up to 2700-fold using, successively, ammonium sulphate precipitation, gel filtration and concanavalin A-Sepharose. Internal sequence analysis of a 55 kDa protein identified in the extract following 2700-fold purification revealed strong similarity to the primary sequence of GLPQ, a bacterial GPX-PDE. To confirm the identity of plant GPX-PDE, an Arabidopsis thaliana cDNA similar to that encoding the bacterial GPX-PDE was cloned and overexpressed in a bacterial expression system, and was used to raise antibodies against the putative Arabidopsis thaliana GPX-PDE. Immunochemical assays performed on carrot cell wall proteins extracted by CaCl2 treatment showed a strong correlation between GPX-PDE activity and detection of the 55 kDa protein, validating the identity of the plant GPX-PDE. Finally, various properties of the purified enzyme were investigated. GPX-PDE is a multimeric enzyme, specific for glycerophosphodiesters, exhibiting a K(m) of 36 microM for glycerophosphocholine and active within a wide pH range (from 4 to 10). Since these properties are similar to those of GLPQ, the bacterial GPX-PDE, the similarities between plant and bacterial enzymes are also discussed.


Asunto(s)
Arabidopsis/enzimología , Arabidopsis/genética , Daucus carota/enzimología , Hidrolasas Diéster Fosfóricas/aislamiento & purificación , Hidrolasas Diéster Fosfóricas/metabolismo , Secuencia de Aminoácidos , Arabidopsis/citología , Arabidopsis/inmunología , Bacterias/enzimología , Pared Celular/enzimología , Clonación Molecular , Secuencia Conservada , Daucus carota/citología , Daucus carota/inmunología , Evolución Molecular , Sueros Inmunes/inmunología , Datos de Secuencia Molecular , Peso Molecular , Hidrolasas Diéster Fosfóricas/química , Hidrolasas Diéster Fosfóricas/genética , Vacuolas/enzimología
16.
J Biol Chem ; 278(27): 24966-75, 2003 Jul 04.
Artículo en Inglés | MEDLINE | ID: mdl-12714594

RESUMEN

In plants, the last step of the biotin biosynthetic pathway is localized in mitochondria. This chemically complex reaction is catalyzed by the biotin synthase protein, encoded by the bio2 gene in Arabidopsis thaliana. Unidentified mitochondrial proteins in addition to the bio2 gene product are obligatory for the reaction to occur. In order to identify these additional proteins, potato mitochondrial matrix was fractionated onto different successive chromatographic columns. Combination experiments using purified Bio2 protein and the resulting mitochondrial matrix subfractions together with a genomic based research allowed us to identify mitochondrial adrenodoxin, adrenodoxin reductase, and cysteine desulfurase (Nfs1) proteins as essential components for the plant biotin synthase reaction. Arabidopsis cDNAs encoding these proteins were cloned, and the corresponding proteins were expressed in Escherichia coli cells and purified. Purified recombinant adrenodoxin and adrenodoxin reductase proteins formed in vitro an efficient low potential electron transfer chain that interacted with the bio2 gene product to reconstitute a functional plant biotin synthase complex. Bio2 from Arabidopsis is the first identified protein partner for this specific plant mitochondrial redox chain.


Asunto(s)
Arabidopsis/enzimología , Sulfurtransferasas/metabolismo , Secuencia de Aminoácidos , Arabidopsis/genética , Datos de Secuencia Molecular , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Alineación de Secuencia
17.
Plant Physiol ; 131(3): 1431-9, 2003 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-12644692

RESUMEN

Tetrahydrofolate (THF) is a central cofactor for one-carbon transfer reactions in all living organisms. In this study, we analyzed the expression of dihydropterin pyrophosphokinase-dihydropteroate synthase (HPPK-DHPS) in pea (Pisum sativum) organs during development, and so the capacity to synthesize dihydropteroate, an intermediate in the de novo THF biosynthetic pathway. During seedling development, all of the examined organs/tissues contain THF coenzymes, collectively termed folate, and express the HPPK-DHPS enzyme. This suggests that each organ/tissue is autonomous for the synthesis of THF. During germination, folate accumulates in cotyledons and embryos, but high amounts of HPPK-DHPS are only observed in embryos. During organ differentiation, folate is synthesized preferentially in highly dividing tissues and in photosynthetic leaves. This is associated with high levels of the HPPK-DHPS mRNA and protein, and a pool of folate 3- to 5-fold higher than in the rest of the plant. In germinating embryos and in meristematic tissues, the high capacity to synthesize and accumulate folate correlates with the general resumption of cell metabolism and the high requirement for nucleotide synthesis, major cellular processes involving folate coenzymes. The particular status of folate synthesis in leaves is related to light. Thus, when illuminated, etiolated leaves gradually accumulate the HPPK-DHPS enzyme and folate. This suggests that folate synthesis plays an important role in the transition from heterotrophic to photoautotrophic growth. Analysis of the intracellular distribution of folate in green and etiolated leaves indicates that the coenzymes accumulate mainly in the cytosol, where they can supply the high demand for methyl groups.


Asunto(s)
Carbono/metabolismo , Pisum sativum/metabolismo , Hojas de la Planta/metabolismo , Semillas/metabolismo , Tetrahidrofolatos/biosíntesis , Diferenciación Celular/fisiología , Coenzimas/biosíntesis , Cotiledón/crecimiento & desarrollo , Cotiledón/metabolismo , Ácido Fólico/biosíntesis , Germinación/fisiología , Luz , Meristema/crecimiento & desarrollo , Meristema/metabolismo , Complejos Multienzimáticos/genética , Complejos Multienzimáticos/metabolismo , Pisum sativum/genética , Pisum sativum/efectos de la radiación , Pigmentos Biológicos/metabolismo , Hojas de la Planta/crecimiento & desarrollo , Raíces de Plantas/crecimiento & desarrollo , Raíces de Plantas/metabolismo , Tallos de la Planta/crecimiento & desarrollo , Tallos de la Planta/metabolismo , Pterinas/metabolismo , Semillas/crecimiento & desarrollo
18.
Photosynth Res ; 78(3): 205-30, 2003.
Artículo en Inglés | MEDLINE | ID: mdl-16245052

RESUMEN

Proteomics is a very powerful approach to link the information contained in sequenced genomes, like Arabidopsis, to the functional knowledge provided by studies of plant cell compartments, such as chloroplast envelope membranes. This review summarizes the present state of proteomic analyses of highly purified spinach and Arabidopsis envelope membranes. Methods targeted towards the hydrophobic core of the envelope allow identifying new proteins, and especially new transport systems. Common features were identified among the known and newly identified putative envelope inner membrane transporters and were used to mine the complete Arabidopsis genome to establish a virtual plastid envelope integral protein database. Arabidopsis envelope membrane proteins were extracted using different methods, that is, chloroform/methanol extraction, alkaline or saline treatments, in order to retrieve as many proteins as possible, from the most to the less hydrophobic ones. Mass spectrometry analyses lead to the identification of more than 100 proteins. More than 50% of the identified proteins have functions known or very likely to be associated with the chloroplast envelope. These proteins are (a) involved in ion and metabolite transport, (b) components of the protein import machinery and (c) involved in chloroplast lipid metabolism. Some soluble proteins, like proteases, proteins involved in carbon metabolism or in responses to oxidative stress, were associated with envelope membranes. Almost one third of the newly identified proteins have no known function. The present stage of the work demonstrates that a combination of different proteomics approaches together with bioinformatics and the use of different biological models indeed provide a better understanding of chloroplast envelope biochemical machinery at the molecular level.

19.
Plant Physiol ; 130(1): 244-55, 2002 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-12226504

RESUMEN

Glycerophosphocholine (GroPCho) is a diester that accumulates in different physiological processes leading to phospholipid remodeling. However, very little is known about its metabolism in higher plant cells. (31)P-Nuclear magnetic resonance spectroscopy and biochemical analyses performed on carrot (Daucus carota) cells fed with GroPCho revealed the existence of an extracellular GroPCho phosphodiesterase. This enzymatic activity splits GroPCho into sn-glycerol-3-phosphate and free choline. In vivo, sn-glycerol-3-phosphate is further hydrolyzed into glycerol and inorganic phosphate by acid phosphatase. We visualized the incorporation and the compartmentation of choline and observed that the major choline pool was phosphorylated and accumulated in the cytosol, whereas a minor fraction was incorporated in the vacuole as free choline. Isolation of plasma membranes, culture medium, and cell wall proteins enabled us to localize this phosphodiesterase activity on the cell wall. We also report the existence of an intracellular glycerophosphodiesterase. This second activity is localized in the vacuole and hydrolyzes GroPCho in a similar fashion to the cell wall phosphodiesterase. Both extra- and intracellular phosphodiesterases are widespread among different plant species and are often enhanced during phosphate deprivation. Finally, competition experiments on the extracellular phosphodiesterase suggested a specificity for glycerophosphodiesters (apparent K(m) of 50 microM), which distinguishes it from other phosphodiesterases previously described in the literature.


Asunto(s)
Glicerilfosforilcolina/metabolismo , Hidrolasas Diéster Fosfóricas/metabolismo , Plantas/enzimología , Isótopos de Carbono , Pared Celular/enzimología , Células Cultivadas , Colina/metabolismo , Citosol/enzimología , Hemicolinio 3/farmacología , Concentración de Iones de Hidrógeno , Hidrólisis , Espectroscopía de Resonancia Magnética , Fosfatos/farmacología , Hidrolasas Diéster Fosfóricas/efectos de los fármacos , Hidrolasas Diéster Fosfóricas/aislamiento & purificación , Isótopos de Fósforo/metabolismo , Células Vegetales , Protoplastos/enzimología , Especificidad por Sustrato , Vacuolas/enzimología
20.
Biochem J ; 363(Pt 2): 313-9, 2002 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-11931659

RESUMEN

The plant enzyme 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase/7,8-dihydropteroate synthase (HPPK/DHPS) is a mitochondrial bifunctional protein involved in tetrahydrofolate synthesis. The first domain (HPPK) catalyses the pyrophosphorylation of 6-hydroxymethyl-7,8-dihydropterin (dihydropterin) by ATP, leading to 6-hydroxymethyl-7,8-dihydropterin pyrophosphate (dihydropterinPP(i)) and AMP. The second domain (DHPS) catalyses the next step, i.e. the condensation of p-aminobenzoic acid (p-ABA) with dihydropterinPP(i) to give 7,8-dihydropteroate (dihydropteroate) and PP(i). In the present article we studied the coupling between these two reactions. Kinetic data obtained for the HPPK domain are consistent with an ordered Bi Bi mechanism where ATP binds first and dihydropterinPP(i) is released last, as proposed previously for the monofunctional Escherichia coli enzyme. In the absence of p-ABA, AMP and dihydropterinPP(i) accumulate and negatively regulate the reaction. In the presence of p-ABA, the rates of AMP and dihydropteroate synthesis are similar, indicating a good coupling between the two reactions. DihydropterinPP(i), an intermediate of the two reactions, never accumulates in this situation. The high specific activity of DHPS relative to HPPK, rather than a preferential channelling of dihydropterinPP(i) between the two catalytic sites, could explain these kinetic data. The maximal velocity of the DHPS domain is limited by the availability of dihydropterinPP(i). It is strongly feedback-inhibited by dihydropteroate and also dihydrofolate and tetrahydrofolate monoglutamate, two intermediates synthesized downstream in the folate biosynthetic pathway. Thus the HPPK domain of this bifunctional protein is the limiting factor of the overall reaction, but the DHPS domain is a potential key regulatory point of the whole folate biosynthetic pathway.


Asunto(s)
Dihidropteroato Sintasa/metabolismo , Difosfotransferasas/metabolismo , Ácido Fólico/biosíntesis , Mitocondrias/metabolismo , Plantas/metabolismo , Sitios de Unión , Dihidropteroato Sintasa/química , Dihidropteroato Sintasa/genética , Difosfotransferasas/química , Difosfotransferasas/genética , Escherichia coli/genética , Cinética , Modelos Biológicos , Plantas/genética , Estructura Terciaria de Proteína , Pterinas/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo
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