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1.
Acta Trop ; 237: 106732, 2023 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-36309108

RESUMEN

Leishmania infantum, the causative agent of American Visceral Leishmaniasis (VL), is known for its ability to modulate the host immune response to its own favor. Ecto-nucleoside triphosphate diphosphohydrolase (ENTPDase) represents a family of enzymes that hydrolyze nucleotides and are involved in nucleotide-dependent biological processes. L. infantum has two ENTPDases, namely LiNTPDase1 and LiNTPDase2. Here, we used genetic tools to overexpress or abolish the expression of LiNTPDase1 and -2 to assess their role in parasite growth in culture and macrophage infection. While LiNTPDase1 or 2-overexpressing clones showed no morphological or growth changes in promastigotes, LiNTPDase2 overexpression increased macrophage adhesion and infection by 50% and 30%, respectively. The individual LiNTPDase1 and 2 knockout mutants showed lag in growth profile, which was reversed by the addition of adenine and guanine to the culture media. Moreover, the morphology of the knockout mutants even in supplemented media was changed to an amastigote-like form. The double knockout of both genes was lethal and a mechanism of compensation of deletion of one isoform was detected in these mutants. Correspondingly, the absence of LiNTPDase1 or LiNTPDase2 led to a dramatic reduction in in vitro infection (∼90%). Interestingly, nitric oxide production was decreased in both knockout mutants during infection, which suggests that both LiNTPDases can inhibit macrophage responses against the parasite. Overall, our results show important roles of LiNTPDase1 and -2 concerning in vitro macrophage infection and reinforce their use as potential targets to control Leishmania infections.


Asunto(s)
Leishmania infantum , Leishmaniasis Cutánea , Leishmaniasis Visceral , Parásitos , Animales , Óxido Nítrico/metabolismo , Leishmaniasis Visceral/parasitología , Macrófagos , Parásitos/metabolismo
2.
Nucleic Acids Res ; 49(16): 9459-9478, 2021 09 20.
Artículo en Inglés | MEDLINE | ID: mdl-34358325

RESUMEN

DDX3 is a multifaceted RNA helicase of the DEAD-box family that plays central roles in all aspects of RNA metabolism including translation initiation. Here, we provide evidence that the Leishmania DDX3 ortholog functions in post-initiation steps of translation. We show that genetic depletion of DDX3 slows down ribosome movement resulting in elongation-stalled ribosomes, impaired translation elongation and decreased de novo protein synthesis. We also demonstrate that the essential ribosome recycling factor Rli1/ABCE1 and termination factors eRF3 and GTPBP1 are less recruited to ribosomes upon DDX3 loss, suggesting that arrested ribosomes may be inefficiently dissociated and recycled. Furthermore, we show that prolonged ribosome stalling triggers co-translational ubiquitination of nascent polypeptide chains and a higher recruitment of E3 ubiquitin ligases and proteasome components to ribosomes of DDX3 knockout cells, which further supports that ribosomes are not elongating optimally. Impaired elongation of translating ribosomes also results in the accumulation of cytoplasmic protein aggregates, which implies that defects in translation overwhelm the normal quality controls. The partial recovery of translation by overexpressing Hsp70 supports this possibility. Collectively, these results suggest an important novel contribution of DDX3 to optimal elongation of translating ribosomes by preventing prolonged translation stalls and stimulating recycling of arrested ribosomes.


Asunto(s)
Leishmania infantum/genética , Biosíntesis de Proteínas , ARN Helicasas/genética , Ribosomas/genética , Proteínas HSP70 de Choque Térmico/genética , Humanos , Biosíntesis de Péptidos/genética , Péptidos/genética , Modificación Traduccional de las Proteínas/genética , Proteínas Ribosómicas/genética , Ubiquitina-Proteína Ligasas/genética
3.
Sci Rep ; 10(1): 13135, 2020 08 04.
Artículo en Inglés | MEDLINE | ID: mdl-32753747

RESUMEN

Valosin-containing protein (VCP)/p97/Cdc48 is an AAA + ATPase associated with many ubiquitin-dependent cellular pathways that are central to protein quality control. VCP binds various cofactors, which determine pathway selectivity and substrate processing. Here, we used co-immunoprecipitation and mass spectrometry studies coupled to in silico analyses to identify the Leishmania infantum VCP (LiVCP) interactome and to predict molecular interactions between LiVCP and its major cofactors. Our data support a largely conserved VCP protein network in Leishmania including known but also novel interaction partners. Network proteomics analysis confirmed LiVCP-cofactor interactions and provided novel insights into cofactor-specific partners and the diversity of LiVCP complexes, including the well-characterized VCP-UFD1-NPL4 complex. Gene Ontology analysis coupled with digitonin fractionation and immunofluorescence studies support cofactor subcellular compartmentalization with either cytoplasmic or organellar or vacuolar localization. Furthermore, in silico models based on 3D homology modeling and protein-protein docking indicated that the conserved binding modules of LiVCP cofactors, except for NPL4, interact with specific binding sites in the hexameric LiVCP protein, similarly to their eukaryotic orthologs. Altogether, these results allowed us to build the first VCP protein interaction network in parasitic protozoa through the identification of known and novel interacting partners potentially associated with distinct VCP complexes.


Asunto(s)
Simulación por Computador , Leishmania infantum/química , Complejos Multiproteicos/química , Proteínas Protozoarias/química , Proteína que Contiene Valosina/química , Leishmania infantum/metabolismo , Complejos Multiproteicos/metabolismo , Estructura Cuaternaria de Proteína , Proteínas Protozoarias/metabolismo , Proteína que Contiene Valosina/metabolismo
4.
Cell Microbiol ; 20(10): e12867, 2018 10.
Artículo en Inglés | MEDLINE | ID: mdl-29895095

RESUMEN

Valosin-containing protein (VCP)/p97/Cdc48 is one of the best-characterised type II cytosolic AAA+ ATPases most known for their role in ubiquitin-dependent protein quality control. Here, we provide functional insights into the role of the Leishmania VCP/p97 homologue (LiVCP) in the parasite intracellular development. We demonstrate that although LiVCP is an essential gene, Leishmania infantum promastigotes can grow with less VCP. In contrast, growth of axenic and intracellular amastigotes is dramatically affected upon decreased LiVCP levels in heterozygous and temperature sensitive (ts) LiVCP mutants or the expression of dominant negative mutants known to specifically target the second conserved VCP ATPase domain, a major contributor of the VCP overall ATPase activity. Interestingly, these VCP mutants are also unable to survive heat stress, and a ts VCP mutant is defective in amastigote growth. Consistent with LiVCP's essential function in amastigotes, LiVCP messenger ribonucleic acid undergoes 3'Untranslated Region (UTR)-mediated developmental regulation, resulting in higher VCP expression in amastigotes. Furthermore, we show that parasite mutant lines expressing lower VCP levels or dominant negative VCP forms exhibit high accumulation of polyubiquitinated proteins and increased sensitivity to proteotoxic stress, supporting the ubiquitin-selective chaperone function of LiVCP. Together, these results emphasise the crucial role LiVCP plays under heat stress and during the parasite intracellular development.


Asunto(s)
Espacio Intracelular/parasitología , Leishmania infantum/crecimiento & desarrollo , Proteína que Contiene Valosina/metabolismo , Regiones no Traducidas 3'/genética , Secuencia de Bases/genética , Retículo Endoplásmico/metabolismo , Regulación de la Expresión Génica/genética , Vida Libre de Gérmenes/fisiología , Respuesta al Choque Térmico/fisiología , Leishmania infantum/genética , Chaperonas Moleculares/metabolismo , Dominios Proteicos/genética , ARN Mensajero/genética , Ubiquitina/metabolismo , Ubiquitinación , Proteína que Contiene Valosina/genética
5.
RNA ; 23(12): 1874-1885, 2017 12.
Artículo en Inglés | MEDLINE | ID: mdl-28877997

RESUMEN

Leishmania and other trypanosomatid protozoa lack control at the level of transcription initiation and regulate gene expression exclusively post-transcriptionally. We have reported previously that Leishmania harbors a unique class of short interspersed degenerate retroposons (SIDERs) that are predominantly located within 3'UTRs and play a major role in post-transcriptional control. We have shown that members of the SIDER2 subfamily initiate mRNA decay through endonucleolytic cleavage within the second conserved 79-nt signature sequence of SIDER2 retroposons. Here, we have developed an optimized MS2 coat protein tethering system to capture trans-acting factor(s) regulating SIDER2-mediated mRNA decay. Tethering of the MS2 coat protein to a reporter RNA harboring two MS2 stem-loop aptamers and the cognate SIDER2-containing 3'UTR in combination with immunoprecipitation and mass spectrometry analysis led to the identification of RNA-binding proteins with known functions in mRNA decay. Among the candidate SIDER2-interacting proteins that were individually tethered to a SIDER2 reporter RNA, the Pumilio-domain protein PUF6 was shown to enhance degradation and reduce transcript half-life. Furthermore, we showed that PUF6 binds to SIDER2 sequences that include the regulatory 79-nt signature motif, hence contributing to the mRNA decay process. Consistent with a role of PUF6 in SIDER2-mediated decay, genetic inactivation of PUF6 resulted in increased accumulation and higher stability of endogenous SIDER2-bearing transcripts. Overall, these studies provide new insights into regulated mRNA decay pathways in Leishmania controlled by SIDER2 retroposons and propose a broader role for PUF proteins in mRNA decay within the eukaryotic kingdom.


Asunto(s)
Regiones no Traducidas 3'/genética , Regulación de la Expresión Génica , Leishmania infantum/genética , Proteínas Protozoarias/metabolismo , Estabilidad del ARN , ARN Protozoario/genética , Retroelementos/genética , Genoma de Protozoos , Proteínas Protozoarias/genética
6.
Cell Death Dis ; 7(10): e2406, 2016 10 13.
Artículo en Inglés | MEDLINE | ID: mdl-27735940

RESUMEN

DDX3 is a highly conserved member of ATP-dependent DEAD-box RNA helicases with multiple functions in RNA metabolism and cellular signaling. Here, we describe a novel function for DDX3 in regulating the mitochondrial stress response in the parasitic protozoan Leishmania. We show that genetic inactivation of DDX3 leads to the accumulation of mitochondrial reactive oxygen species (ROS) associated with a defect in hydrogen peroxide detoxification. Upon stress, ROS production is greatly enhanced, causing mitochondrial membrane potential loss, mitochondrial fragmentation, and cell death. Importantly, this phenotype is exacerbated upon oxidative stress in parasites forced to use the mitochondrial oxidative respiratory machinery. Furthermore, we show that in the absence of DDX3, levels of major components of the unfolded protein response as well as of polyubiquitinated proteins increase in the parasite, particularly in the mitochondrion, as an indicator of mitochondrial protein damage. Consistent with these findings, immunoprecipitation and mass-spectrometry studies revealed potential interactions of DDX3 with key components of the cellular stress response, particularly the antioxidant response, the unfolded protein response, and the AAA-ATPase p97/VCP/Cdc48, which is essential in mitochondrial protein quality control by driving proteosomal degradation of polyubiquitinated proteins. Complementation studies using DDX3 deletion mutants lacking conserved motifs within the helicase core support that binding of DDX3 to ATP is essential for DDX3's function in mitochondrial proteostasis. As a result of the inability of DDX3-depleted Leishmania to recover from ROS damage and to survive various stresses in the host macrophage, parasite intracellular development was impaired. Collectively, these observations support a central role for the Leishmania DDX3 homolog in preventing ROS-mediated damage and in maintaining mitochondrial protein quality control.


Asunto(s)
Diferenciación Celular , ARN Helicasas DEAD-box/metabolismo , Leishmania/citología , Leishmania/enzimología , Proteínas Mitocondriales/metabolismo , Proteínas Protozoarias/metabolismo , Muerte Celular , Peróxido de Hidrógeno/metabolismo , Potencial de la Membrana Mitocondrial , Estrés Oxidativo , Poliubiquitina/metabolismo , Unión Proteica , Estrés Fisiológico , Ubiquitinación , Respuesta de Proteína Desplegada
7.
PLoS One ; 10(9): e0137243, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26334886

RESUMEN

Alba-domain proteins are RNA-binding proteins found in archaea and eukaryotes and recently studied in protozoan parasites where they play a role in the regulation of virulence factors and stage-specific proteins. This work describes in silico structural characterization, cellular localization and biochemical analyses of Alba-domain proteins in Leishmania infantum. We show that in contrast to other protozoa, Leishmania have two Alba-domain proteins, LiAlba1 and LiAlba3, representative of the Rpp20- and the Rpp25-like eukaryotic subfamilies, respectively, which share several sequence and structural similarities but also important differences with orthologs in other protozoa, especially in sequences targeted for post-translational modifications. LiAlba1 and LiAlba3 proteins form a complex interacting with other RNA-binding proteins, ribosomal subunits, and translation factors as supported by co-immunoprecipitation and sucrose gradient sedimentation analysis. A higher co-sedimentation of Alba proteins with ribosomal subunits was seen upon conditions of decreased translation, suggesting a role of these proteins in translational repression. The Leishmania Alba-domain proteins display differential cellular localization throughout the parasite development. In the insect promastigote stage, Alba proteins co-localize predominantly to the cytoplasm but they translocate to the nucleolus and the flagellum upon amastigote differentiation in the mammalian host and are found back to the cytoplasm once amastigote differentiation is completed. Heat-shock, a major signal of amastigote differentiation, triggers Alba translocation to the nucleolus and the flagellum. Purification of the Leishmania flagellum confirmed LiAlba3 enrichment in this organelle during amastigote differentiation. Moreover, partial characterization of the Leishmania flagellum proteome of promastigotes and differentiating amastigotes revealed the presence of other RNA-binding proteins, as well as differences in the flagellum composition between these two parasite lifestages. Shuttling of Alba-domain proteins between the cytoplasm and the nucleolus or the flagellum throughout the parasite life cycle suggests that these RNA-binding proteins participate in several distinct regulatory pathways controlling developmental gene expression in Leishmania.


Asunto(s)
Leishmania infantum/crecimiento & desarrollo , Proteínas Protozoarias/análisis , Nucléolo Celular/química , Citoplasma/química , Flagelos/química , Calor , Leishmania infantum/citología , Orgánulos/química , Transporte de Proteínas , Proteoma , Proteínas Protozoarias/química , Alineación de Secuencia , Fracciones Subcelulares/química
8.
Vaccine ; 32(43): 5730-9, 2014 Sep 29.
Artículo en Inglés | MEDLINE | ID: mdl-25173481

RESUMEN

Influenza viruses are major respiratory pathogens and the development of improved vaccines to prevent these infections is of high priority. Here, we evaluated split inactivated A(H3N2) vaccines (A/Uruguay/716/2007) combined or not with adjuvants (AS03, AS25 and Protollin) and administered by three different routes, intramuscular (i.m.), intranasal (i.n.) or intradermal (i.d.), both in BALB/c mice and in ferrets. Ferrets were challenged with the homologous strain A/Uruguay/716/2007 (H3N2) or the heterologous strain A/Perth/16/2009 (H3N2) 4 weeks after the second immunization with A/Uruguay/716/2007 vaccines. Temperature, weight loss and clinical signs were monitored on a daily basis and nasal washes were performed to evaluate viral titers in the upper respiratory tract. All adjuvanted vaccines induced stronger humoral immune responses than unadjuvanted ones in both mice and ferrets. In mice, the AS03- and AS25-adjuvanted i.m. vaccines generated a mixed Th1-Th2 response at 6 and 19 weeks after the last immunization as shown by the production of IgG1 and IgG2a antibodies as well as the production of IL-2, IL-4 and IFN-γ by CD4+ and CD8+ T cells. HAI and MN titers were also higher in those groups when compared to the i.n. Protollin-adjuvanted and unadjuvanted groups. The Protollin-adjuvanted i.n. vaccine induced a more Th1 oriented response with a significant production of IgA in bronchoalveolar lavages. In ferrets, the AS03- and AS25-adjuvanted i.m. vaccines also induced higher HAI and MN titers compared to the other groups. These vaccines also significantly decreased viral titers after challenge with both the homologous A/Uruguay/716/2007 (H3N2) and the heterologous A/Perth/16/2009 (H3N2) strains. In conclusion, adjuvanted influenza vaccines elicited stronger humoral response in mice and conferred greater protection in naive ferrets than unadjuvanted ones. Interestingly, the AS25 adjuvant system containing monophosphoryl-lipid-A appears particularly promising for developing more potent inactivated influenza vaccines.


Asunto(s)
Adyuvantes Inmunológicos/administración & dosificación , Inmunidad Humoral , Vacunas contra la Influenza/inmunología , Infecciones por Orthomyxoviridae/prevención & control , Animales , Anticuerpos Antivirales/sangre , Protección Cruzada , Cisteína Endopeptidasas/administración & dosificación , Citocinas/inmunología , Combinación de Medicamentos , Femenino , Hurones , Inmunidad Mucosa , Inmunoglobulina G/sangre , Subtipo H3N2 del Virus de la Influenza A , Lipopolisacáridos/administración & dosificación , Masculino , Ratones Endogámicos BALB C , Células TH1/inmunología , Vacunas de Productos Inactivados/inmunología
9.
Mol Microbiol ; 91(3): 548-61, 2014 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-24620725

RESUMEN

Leishmania infantum promastigotes differentiate into amastigote forms within the phagolysosome of mammalian macrophages causing visceral leishmaniasis. Delta-amastins belong to a multigenic surface protein family of potential virulence factors that are specifically expressed in the amastigote life cycle stage through distinct regulatory elements in the 3' UTR controlling either mRNA stability or translation. Here, we provide novel insights on trans-acting factors regulating amastin developmental gene expression. Using RNA affinity chromatography with a 300 nt regulatory region within the amastin 3' UTR as bait, we identified an Alba-domain protein of 25 kDa (LiAlba20) as a specific amastin mRNA-binding partner. Genomic depletion of LiAlba20 results in amastin mRNA destabilization specifically in amastigotes, supporting a role of LiAlba20 in amastin gene regulation. As shown by comparative DNA microarray analysis, several delta-amastin transcripts but also other known developmentally regulated transcripts were downregulated in LiAlba20-/- knockout parasites. Inactivation of the second Alba-domain gene, LiAlba13, does not seem to affect amastin mRNA stability in either life stage of the parasite. These data indicate an important role of Alba-domain proteins in the regulation of Leishmania differentially expressed transcripts and open a new field of investigation for better understanding mechanisms contributing to post-transcriptional control in these parasites.


Asunto(s)
Regulación de la Expresión Génica , Leishmania infantum/crecimiento & desarrollo , Leishmania infantum/genética , Proteínas Protozoarias/metabolismo , Estabilidad del ARN , Proteínas de Unión al ARN/metabolismo , Perfilación de la Expresión Génica , Técnicas de Inactivación de Genes , Análisis por Micromatrices , Proteínas Protozoarias/genética , Proteínas de Unión al ARN/genética
10.
PLoS One ; 7(12): e52612, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-23285111

RESUMEN

In contrast to nearly all eukaryotes, the Old World Leishmania species L. infantum and L. major lack the bona fide RNAi machinery genes. Interestingly, both Leishmania genomes code for an atypical Argonaute-like protein that possesses a PIWI domain but lacks the PAZ domain found in Argonautes from RNAi proficient organisms. Using sub-cellular fractionation and confocal fluorescence microscopy, we show that unlike other eukaryotes, the PIWI-like protein is mainly localized in the single mitochondrion in Leishmania. To predict PIWI function, we generated a knockout mutant for the PIWI gene in both L. infantum (Lin) and L. major species by double-targeted gene replacement. Depletion of PIWI has no effect on the viability of insect promastigote forms but leads to an important growth defect of the mammalian amastigote lifestage in vitro and significantly delays disease pathology in mice, consistent with a higher expression of the PIWI transcript in amastigotes. Moreover, amastigotes lacking PIWI display a higher sensitivity to apoptosis inducing agents than wild type parasites, suggesting that PIWI may be a sensor for apoptotic stimuli. Furthermore, a whole-genome DNA microarray analysis revealed that loss of LinPIWI in Leishmania amastigotes affects mostly the expression of specific subsets of developmentally regulated genes. Several transcripts encoding surface and membrane-bound proteins were found downregulated in the LinPIWI((-/-)) mutant whereas all histone transcripts were upregulated in the null mutant, supporting the possibility that PIWI plays a direct or indirect role in the stability of these transcripts. Although our data suggest that PIWI is not involved in the biogenesis or the stability of small noncoding RNAs, additional studies are required to gain further insights into the role of this protein on RNA regulation and amastigote development in Leishmania.


Asunto(s)
Proteínas Argonautas/genética , Leishmania/genética , Secuencia de Aminoácidos , Animales , Apoptosis/genética , Proteínas Argonautas/química , Regulación del Desarrollo de la Expresión Génica , Leishmania infantum/genética , Leishmania major/genética , Leishmaniasis/parasitología , Ratones , Mitocondrias/genética , Mitocondrias/metabolismo , Datos de Secuencia Molecular , Dominios y Motivos de Interacción de Proteínas , Interferencia de ARN , ARN Pequeño no Traducido/genética , ARN Pequeño no Traducido/metabolismo , Alineación de Secuencia , Transcripción Genética
11.
Cell Microbiol ; 13(7): 1059-77, 2011 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-21624030

RESUMEN

The parasitic protozoan Leishmania is the etiological agent of human leishmaniasis worldwide. It undergoes cellular differentiation from the sandfly promastigote form into amastigotes within mammalian macrophages, a process that is essential for its intracellular survival. Here, we characterized the Leishmania infantum PERK eIF2alpha kinase homologue and addressed its role in the parasite's cytodifferentiation. We show that Leishmania PERK is an endoplasmic reticulum (ER) transmembrane protein that largely colocalizes with the ER BiP chaperone. The Leishmania PERK catalytic kinase domain undergoes autohyperphosphorylation and phosphorylates the translation initiation factor 2-alpha subunit (eIF2alpha) in vitro at threonine 166. We also report that PERK is post-translationally regulated specifically in the intracellular stage of the parasite or under ER stress, most likely through extensive autohyperphosphorylation. We have generated a PERK dominant negative mutant overexpressing a truncated PERK protein lacking the N-terminal luminal domain and showed that this mutant is impaired in eIF2alpha phosphorylation in response to ER stress or during amastigote differentiation. Most importantly, we showed that lack of eIF2alpha phosphorylation markedly delays the Leishmania differentiation process towards amastigote forms both in parasites grown axenically or within macrophages. These data highlight the importance of PERK eIF2alpha kinase-dependent eIF2alpha phosphorylation in the intracellular development of Leishmania.


Asunto(s)
Factor 2 Eucariótico de Iniciación/metabolismo , Leishmania infantum/enzimología , Leishmania infantum/crecimiento & desarrollo , eIF-2 Quinasa/metabolismo , Secuencia de Aminoácidos , Retículo Endoplásmico/enzimología , Datos de Secuencia Molecular , Proteínas Mutantes/genética , Proteínas Mutantes/metabolismo , Fosforilación , Eliminación de Secuencia , Homología de Secuencia de Aminoácido , eIF-2 Quinasa/genética
12.
Nucleic Acids Res ; 38(17): 5867-83, 2010 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-20453029

RESUMEN

We have previously shown that the Leishmania genome possess two widespread families of extinct retroposons termed Short Interspersed DEgenerated Retroposons (SIDER1/2) that play a role in post-transcriptional regulation. Moreover, we have demonstrated that SIDER2 retroposons promote mRNA degradation. Here we provide new insights into the mechanism by which unstable Leishmania mRNAs harboring a SIDER2 retroposon in their 3'-untranslated region are degraded. We show that, unlike most eukaryotic transcripts, SIDER2-bearing mRNAs do not undergo poly(A) tail shortening prior to rapid turnover, but instead, they are targeted for degradation by a site-specific endonucleolytic cleavage. The main cleavage site was mapped in two randomly selected SIDER2-containing mRNAs in vivo between an AU dinucleotide at the 5'-end of the second 79-nt signature (signature II), which represents the most conserved sequence amongst SIDER2 retroposons. Deletion of signature II abolished endonucleolytic cleavage and deadenylation-independent decay and increased mRNA stability. Interestingly, we show that overexpression of SIDER2 anti-sense RNA can increase sense transcript abundance and stability, and that complementarity to the cleavage region is required for protecting SIDER2-containing transcripts from degradation. These results establish a new paradigm for how unstable mRNAs are degraded in Leishmania and could serve as the basis for a better understanding of mRNA decay pathways in general.


Asunto(s)
Regiones no Traducidas 3' , Endorribonucleasas/metabolismo , Leishmania major/genética , Estabilidad del ARN , ARN Mensajero/metabolismo , Retroelementos , Secuencia de Bases , Secuencia Conservada , Leishmania major/enzimología , Datos de Secuencia Molecular , ARN sin Sentido/metabolismo
13.
Eukaryot Cell ; 5(12): 2033-46, 2006 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-17071827

RESUMEN

Leishmania is a protozoan parasite that causes serious morbidity and mortality in humans worldwide. The ability of these parasites to survive within the phagolysosomes of mammalian macrophages is dependent on the developmental regulation of a variety of genes. Identifying genomic sequences that are preferentially expressed during the parasite's intracellular growth would provide new insights about the mechanisms controlling stage-specific gene regulation for intracellular development of the parasite. Using a genomic library that differentially hybridized to probes made from total RNA from Leishmania infantum amastigote or promastigote life cycle stages, we identified a new class of noncoding RNAs (ncRNAs) ranging from approximately 300 to 600 nucleotides in size that are expressed specifically in the intracellular amastigote stage. These ncRNAs are transcribed by RNA polymerase II from genomic clusters of tandem head-to-tail repeats, which are mainly located within subtelomeric regions. Remarkably, both the sense and antisense orientations of these ncRNAs are transcribed and are processed by trans splicing and polyadenylation. The levels of antisense transcripts are at least 10-fold lower than those of the sense transcripts and are tightly regulated. The sense and antisense ncRNAs are cytosolic as shown by fluorescence in situ hybridization studies and cosediment with a small ribonucleoprotein complex. Amastigote-specific regulation of these ncRNAs possibly occurs at the level of RNA stability. Interestingly, overexpression of these ncRNAs in promastigotes, as part of an episomal expression vector, failed to produce any transcript, which further highlights the instability of these RNAs in the promastigote stage. This is the first report describing developmentally regulated ncRNAs in protozoan parasites.


Asunto(s)
Leishmania infantum/genética , ARN Protozoario/genética , ARN no Traducido/genética , Animales , Secuencia de Bases , Secuencia Conservada , Cricetinae , ADN Protozoario/genética , Regulación del Desarrollo de la Expresión Génica , Genes Protozoarios , Humanos , Leishmania infantum/crecimiento & desarrollo , Leishmania infantum/metabolismo , Leishmania infantum/patogenicidad , Datos de Secuencia Molecular , Empalme del ARN , Estabilidad del ARN , ARN Protozoario/metabolismo , ARN no Traducido/metabolismo , Ribonucleoproteínas/metabolismo , Homología de Secuencia de Ácido Nucleico , Secuencias Repetidas en Tándem , Telómero/genética
14.
Nucleic Acids Res ; 33(5): 1699-709, 2005.
Artículo en Inglés | MEDLINE | ID: mdl-15781496

RESUMEN

Attempts to inactivate an essential gene in the protozoan parasite Leishmania have often led to the generation of extra copies of the wild-type alleles of the gene. In experiments with Leishmania tarentolae set up to disrupt the gene encoding the J-binding protein 1 (JBP1), a protein binding to the unusual base beta-D-glucosyl-hydroxymethyluracil (J) of Leishmania, we obtained JBP1 mutants containing linear DNA elements (amplicons) of approximately 100 kb. These amplicons consist of a long inverted repeat with telomeric repeats at both ends and contain either the two different targeting cassettes used to inactivate JBP1, or one cassette and one JBP1 gene. Each long repeat within the linear amplicons corresponds to sequences covering the JBP1 locus, starting at the telomeres upstream of JBP1 and ending in a approximately 220 bp sequence repeated in an inverted (palindromic) orientation downstream of the JBP1 locus. We propose that these amplicons have arisen by a template switch inside a DNA replication fork involving the inverted DNA repeats and helped by the gene targeting.


Asunto(s)
ADN Protozoario/química , Proteínas de Unión al ADN/genética , Higromicina B/análogos & derivados , Leishmania/genética , Proteínas Protozoarias/genética , Secuencias Repetitivas de Ácidos Nucleicos , Alelos , Animales , Secuencia de Bases , Línea Celular , Cinamatos/farmacología , Marcación de Gen , Genes Protozoarios , Higromicina B/farmacología , Leishmania/efectos de los fármacos , Modelos Genéticos , Datos de Secuencia Molecular , Mutación , Plásmidos/química
15.
Infect Immun ; 71(11): 6499-509, 2003 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-14573672

RESUMEN

Leishmania is an intracellular pathogen that replicates inside macrophages. Activated macrophages produce a specific subset of cytokines that play an important role in the control of Leishmania infections. As part of our interest in developing suicide parasites that produce abortive infections for the purposes of vaccination, we engineered recombinant Leishmania major strains producing biologically active granulocyte-macrophage colony-stimulating factor (GM-CSF). We showed that GM-CSF is being produced in the phagosomes of infected macrophages and that it can be detected in the culture supernatants of both infected macrophages and extracellular parasites. Our data support the notion that GM-CSF secreted by both developmental forms of recombinant L. major can activate macrophages to produce high levels of proinflammatory cytokines such as interleukin-1beta (IL-1beta), IL-6, and IL-18 and various chemokines including RANTES/CCL5, MIP-1alpha/CCL3, MIP-1beta/CCL4, MIP-2/CXCL2, and MCP-1/CCL2, which enhance parasite killing. Indeed, GM-CSF-expressing parasites survive poorly in macrophages in vitro and produce delayed lesion development in susceptible BALB/c mice in vivo. Selective killing of intracellular Leishmania expressing cytokine genes capable of activating cellular responses may constitute a promising strategy to control and/or prevent parasitic infections.


Asunto(s)
Factor Estimulante de Colonias de Granulocitos y Macrófagos/farmacología , Leishmania major/inmunología , Leishmaniasis Cutánea/prevención & control , Macrófagos/inmunología , Animales , Línea Celular , Células Cultivadas , Humanos , Interleucina-1/fisiología , Interleucina-18/fisiología , Interleucina-6/fisiología , Activación de Macrófagos , Macrófagos/microbiología , Ratones , Ratones Endogámicos BALB C , Óxido Nítrico/biosíntesis , Proteínas Recombinantes
16.
J Biol Chem ; 277(22): 19511-20, 2002 May 31.
Artículo en Inglés | MEDLINE | ID: mdl-11912202

RESUMEN

Developmental regulation of mRNA levels in trypanosomatid protozoa is determined post-transcriptionally and often involves sequences located in the 3'-untranslated regions (3'-UTR) of the mRNAs. We have previously identified a developmentally regulated gene family in Leishmania encoding the amastin surface proteins and showed that stage-specific accumulation of the amastin mRNA is mediated by sequences within the 3'-UTR. Here we identified a 450-nt region within the amastin 3'-UTR that can confer amastigote-specific gene expression by a novel mechanism that increases mRNA translation without an increase in mRNA stability. Remarkably, this 450-nt 3'-UTR element is highly conserved among a large number of Leishmania mRNAs in several Leishmania species. Here we show that several of these mRNAs are differentially expressed in the intracellular amastigote stage of the parasite and that the 450-nt conserved element in their 3'-UTRs is responsible for stage-specific gene regulation. We propose that the 450-nt conserved element, which is unlike any other regulatory element identified thus far, is part of a common mechanism of stage-regulated gene expression in Leishmania that regulates mRNA translation in response to intracellular stresses.


Asunto(s)
Regiones no Traducidas 3' , Regulación de la Expresión Génica , Leishmania/genética , Animales , Secuencia de Bases , Secuencia Conservada , ADN/metabolismo , Eliminación de Gen , Genes Reporteros , Cinética , Ratones , Ratones Endogámicos BALB C , Datos de Secuencia Molecular , Sistemas de Lectura Abierta , Biosíntesis de Proteínas , ARN Mensajero/metabolismo , Factores de Tiempo , Transfección
18.
Infect Immun ; 70(1): 62-8, 2002 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-11748164

RESUMEN

Pterins are essential for the growth of Leishmania species, and recent work has led to the isolation of the biopterin transporter BT1. In this study, we inactivated the Leishmania donovani biopterin transporter BT1 by gene disruption mediated by homologous recombination. No transport of biopterin was detected in this mutant. The L. donovani BT1 null mutant showed a much lesser capacity for inducing infection in mice than wild-type parasites and could elicit protective immunity in mice susceptible to infection against a L. donovani challenge. Splenocytes isolated from mice immunized with the BT1 null mutant parasites produced significant amounts of interferon gamma following stimulation with L. donovani promastigotes as measured by enzyme-linked immunosorbent assay and enzyme-linked immunospot assays. Overall, these results show that by genetically manipulating the pterin transport in L. donovani, it is possible to generate an attenuated organism that could be part of a vaccination strategy.


Asunto(s)
Proteínas Portadoras/inmunología , Leishmania donovani/inmunología , Leishmaniasis Visceral/prevención & control , Proteínas de Transporte de Membrana , Proteínas Protozoarias , Vacunas Antiprotozoos/inmunología , Animales , Transporte Biológico , Biopterinas/metabolismo , Proteínas Portadoras/genética , Modelos Animales de Enfermedad , Marcación de Gen , Interferón gamma/biosíntesis , Leishmania donovani/genética , Leishmaniasis Visceral/inmunología , Ratones , Ratones Endogámicos BALB C , Mutagénesis , Vacunas Antiprotozoos/genética , Vacunación , Vacunas Atenuadas/genética , Vacunas Atenuadas/inmunología
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