Biochar impacts on nutrient dynamics in a subtropical grassland soil: 1. Nitrogen and phosphorus leaching.

Despite the numerous benefits of biosolids, concerns over nutrient losses restrict the extent to which biosolids can be beneficially reused. We evaluated the effectiveness of biochar in controlling the lability of nutrients in agricultural land. This study was designed to investigate the potential impacts of co-applying biochar with biosolids or inorganic fertilizer on N and P leaching losses. A companion paper focuses on greenhouse gas responses. Nutrients were surface applied as biosolids (aerobically digested Class B) and inorganic fertilizer (ammonium nitrate and triple superphosphate) to an established perennial pasture at equivalent annual rates typical of field practices. Biochar was applied at an annual rate of 20 Mg ha-1 . Leachate N and P were monitored using passive-capillary drainage lysimeters. Results demonstrated significant temporal variability in leachate N and P, with larger pulses generally occurring during periods of high water table levels or after intensive rainfall. Inorganic fertilizer generally resulted in greater leachate N and P losses than biosolids. No differences in leachate N and P losses between biosolids and control were observed. Approximately 1% of applied N was lost via leaching from biosolids treatments vs. 16% for inorganic fertilizer. Regardless of the P source, negligible (0.1-0.2% of applied P), cumulative P leaching occurred during the 3-yr study. Biochar had no effect on P leaching but reduced N leaching from treatments receiving inorganic fertilizer by 60%. Prudent nutrient management is possible even on biosolids-amended Spodosols with high water tables.

Biochar impacts on nutrient dynamics in a subtropical grassland soil: 2. Greenhouse gas emissions.

Land application of biochar reportedly provides many benefits, including reduced risk of nutrient transport, greenhouse gas (GHG) emission mitigation, and increased soil C storage, but additional field validation is needed. We evaluated the effectiveness of biochar in controlling the lability of nutrients in agricultural land. This study was designed to evaluate the impacts of biochar co-applied with various N and P sources on GHG fluxes from a subtropical grassland. Nutrients (inorganic fertilizer and aerobically digested Class B biosolids) were surface applied at a rate of 160 kg plant available N ha-1  yr-1 with or without biochar (applied at 20 Mg ha-1 ). Greenhouse gas (CO2 , CH4 , and N2 O) fluxes were assessed using static chambers and varied significantly, both temporally and with treatments. Greenhouse gas fluxes ranged from 1,247 to 23,160, -0.7 to 42, and -1.4 to 376 mg m-2 d-1 for CO2 , N2 O, and CH4 , respectively. Results of the 3-yr field study demonstrated strong seasonal variability associated with GHG emissions. Nutrient source had no effect on soil CO2 and CH4 emissions, but annual and cumulative (3-yr) N2 O emissions increased with biosolids (8 kg N2 O ha-1  yr-1 ) compared with inorganic fertilizer (5 kg N2 O ha-1  yr-1 ) application. Data suggested that environmental conditions played a more important role on GHG fluxes than nutrient additions. Biochar reduced CO2 emissions modestly (<9%) but had no effects on N2 O and CH4 emissions.

Runoff and Leachate Phosphorus and Nitrogen Losses from Grass-Vegetated Soil Boxes Amended with Biosolids and Fertilizer.

Recent evidence suggests an upward trend in surface water phosphorus (P) concentrations in many segments of Florida, including the upper basin of the St. Johns River, a region that currently receives about two-thirds of the state Class B biosolids land application. Concerns about water quality in this area are encouraging reexamination of the regulations governing biosolids programs. The objectives of this study were (i) to identify and thoroughly characterize the main biosolids sources routinely applied in the region, and (ii) to evaluate runoff and leachate N and P losses from a typical Florida Spodosol amended with biosolids or commercial inorganic fertilizer. Biosolids and inorganic fertilizer were surface applied uniformly at a rate equivalent to ∼114 kg P ha, which corresponded to a typical P load associated with nitrogen (N)-based biosolids application. Soluble reactive P (SRP) was the predominant form of P lost in runoff and leachate. Inorganic P fertilizer increased flow-weighted runoff total P concentrations nearly 60-fold relative to control treatment (0.4 vs. 22 mg P L for control and fertilizer treatments, respectively). With exception of biological P removal (BPR) biosolids, all other tested biosolids yielded flow-weighted runoff P concentrations similar to untreated soils. Cumulative P and N losses (as a percentage of P and N applied) were greater from commercial inorganic fertilizer (∼38% of P and 46% of N) than any biosolids source (3% of P and 6% of N). Results demonstrate the value of water-extractable P (WEP) as an indicator of biosolids P loss potential.

Comparative physiological and metabolomics analysis of wheat (Triticum aestivum L.) following post-anthesis heat stress.

Genetic improvement for stress tolerance requires a solid understanding of biochemical processes involved with different physiological mechanisms and their relationships with different traits. The objective of this study was to demonstrate genetic variability in altered metabolic levels in a panel of six wheat genotypes in contrasting temperature regimes, and to quantify the correlation between those metabolites with different traits. In a controlled environment experiment, heat stress (35:28 ± 0.08°C) was initiated 10 days after anthesis. Flag leaves were collected 10 days after heat treatment to employ an untargeted metabolomics profiling using LC-HRMS based technique called IROA. High temperature stress produced significant genetic variations for cell and thylakoid membrane damage, and yield related traits. 64 known metabolites accumulated 1.5 fold of higher or lower due to high temperature stress. In general, metabolites that increased the most under heat stress (L-tryptophan, pipecolate) showed negative correlation with different traits. Contrary, the metabolites that decreased the most under heat stress (drummondol, anthranilate) showed positive correlation with the traits. Aminoacyl-tRNA biosysnthesis and plant secondary metabolite biosynthesis pathways were most impacted by high temperature stress. The robustness of metabolic change and their relationship with phenotypes renders those metabolites as potential bio-markers for genetic improvement.

QTLs Associated with Crown Root Angle, Stomatal Conductance, and Maturity in Sorghum.

Three factors that directly affect the water inputs in cropping systems are root architecture, length of the growing season, and stomatal conductance to water vapor (). Deeper-rooted cultivars will perform better under water-limited conditions because they can access water stored deeper in the soil profile. Reduced limits transpiration rate () and thus throughout the vegetative phase conserves water that may be used during grain filling in water-limited environments. Additionally, growing early-maturing varieties in regions that rely on soil-stored water is a key water management strategy. To further our understanding of the genetic basis underlying root depth, growing season length, and we conducted a quantitative trait locus (QTL) study. A QTL for crown root angle (a proxy for root depth) new to sorghum was identified in chromosome 3. For , a QTL in chromosome seven was identified. In a follow-up field study it was determined that the QTL for was associated with reduced but not with net carbon assimilation rate () or shoot biomass. No differences in guard-cell length or stomatal density were observed among the lines, leading to the conclusion that the observed differences in must be explained by partial stomatal closure. The well-studied maturity gene was identified in the QTL for maturity. The transgressive segregation of the population was explained by the possible interaction of with other loci. Finally, the most probable position of the genes underlying the QTLs and candidate genes were proposed.

Fermentation of sweet sorghum derived sugars to butyric acid at high titer and productivity by a moderate thermophile Clostridium thermobutyricum at 50°C.

In this study, a moderate thermophile Clostridium thermobutyricum is shown to ferment the sugars in sweet sorghum juice treated with invertase and supplemented with tryptone (10 g L(-1)) and yeast extract (10 g L(-1)) at 50°C to 44 g L(-1) butyrate at a calculated highest volumetric productivity of 1.45 g L(-1)h(-1) (molar butyrate yield of 0.85 based on sugars fermented). This volumetric productivity is among the highest reported for batch fermentations. Sugars from acid and enzyme-treated sweet sorghum bagasse were also fermented to butyrate by this organism with a molar yield of 0.81 (based on the amount of cellulose and hemicellulose). By combining the results from juice and bagasse, the calculated yield of butyric acid is approximately 90 kg per tonne of fresh sweet sorghum stalk. This study demonstrates that C. thermobutyricum can be an effective microbial biocatalyst for production of bio-based butyrate from renewable feedstocks at 50°C.

Comparative Proteomic Analysis of Brassica napus in Response to Drought Stress.

Drought is one of the most widespread stresses leading to retardation of plant growth and development. We examined proteome changes of an important oil seed crop, canola (Brassica napus L.), under drought stress over a 14-day period. Using iTRAQ LC-MS/MS, we identified 1976 proteins expressed during drought stress. Among them, 417 proteins showed significant changes in abundance, and 136, 244, 286, and 213 proteins were differentially expressed in the third, seventh, 10th, and 14th day of stress, respectively. Functional analysis indicated that the number of proteins associated with metabolism, protein folding and degradation, and signaling decreased, while those related to energy (photosynthesis), protein synthesis, and stress and defense increased in response to drought stress. The seventh and 10th-day profiles were similar to each other but with more post-translational modifications (PTMs) at day 10. Interestingly, 181 proteins underwent PTMs; 49 of them were differentially changed in drought-stressed plants, and 33 were observed at the 10th day. Comparison of protein expression changes with those of gene transcription showed a positive correlation in B. napus, although different patterns between transcripts and proteins were observed at each time point. Under drought stress, most protein abundance changes may be attributed to gene transcription, and PTMs clearly contribute to protein diversity and functions.

Direct and indirect effects of elevated atmospheric CO2 on net ecosystem production in a Chesapeake Bay tidal wetland.

The rapid increase in atmospheric CO2 concentrations (Ca ) has resulted in extensive research efforts to understand its impact on terrestrial ecosystems, especially carbon balance. Despite these efforts, there are relatively few data comparing net ecosystem exchange of CO2 between the atmosphere and the biosphere (NEE), under both ambient and elevated Ca . Here we report data on annual sums of CO2 (NEE(net) ) for 19 years on a Chesapeake Bay tidal wetland for Scirpus olneyi (C3 photosynthetic pathway)- and Spartina patens (C4 photosynthetic pathway)-dominated high marsh communities exposed to ambient and elevated Ca (ambient + 340 ppm). Our objectives were to (i) quantify effects of elevated Ca on seasonally integrated CO2 assimilation (NEE(net) = NEE(day) + NEE(night) , kg C m(-2) y(-1) ) for the two communities; and (ii) quantify effects of altered canopy N content on ecosystem photosynthesis and respiration. Across all years, NEE(net) averaged 1.9 kg m(-2) y(-1) in ambient Ca and 2.5 kg m(-2) y(-1) in elevated Ca , for the C3 -dominated community. Similarly, elevated Ca significantly (P < 0.01) increased carbon uptake in the C4 -dominated community, as NEE(net) averaged 1.5 kg m(-2) y(-1) in ambient Ca and 1.7 kg m(-2) y(-1) in elevated Ca . This resulted in an average CO2 stimulation of 32% and 13% of seasonally integrated NEE(net) for the C3 - and C4 -dominated communities, respectively. Increased NEE(day) was correlated with increased efficiencies of light and nitrogen use for net carbon assimilation under elevated Ca , while decreased NEE(night) was associated with lower canopy nitrogen content. These results suggest that rising Ca may increase carbon assimilation in both C3 - and C4 -dominated wetland communities. The challenge remains to identify the fate of the assimilated carbon.

RNA interference suppression of lignin biosynthesis increases fermentable sugar yields for biofuel production from field-grown sugarcane.

The agronomic performance, cell wall characteristics and enzymatic saccharification efficiency of transgenic sugarcane plants with modified lignin were evaluated under replicated field conditions. Caffeic acid O-methyltransferase (COMT) was stably suppressed by RNAi in the field, resulting in transcript reduction of 80%-91%. Along with COMT suppression, total lignin content was reduced by 6%-12% in different transgenic lines. Suppression of COMT also altered lignin composition by reducing syringyl units and p-coumarate incorporation into lignin. Reduction in total lignin by 6% improved saccharification efficiency by 19%-23% with no significant difference in biomass yield, plant height, stalk diameter, tiller number, total structural carbohydrates or brix value when compared with nontransgenic tissue culture-derived or transgenic control plants. Lignin reduction of 8%-12% compromised biomass yield, but increased saccharification efficiency by 28%-32% compared with control plants. Biomass from transgenic sugarcane lines that have 6%-12% less lignin requires approximately one-third of the hydrolysis time or 3- to 4-fold less enzyme to release an equal or greater amount of fermentable sugar than nontransgenic plants. Reducing the recalcitrance of lignocellulosic biomass to saccharification by modifying lignin biosynthesis is expected to greatly benefit the economic competitiveness of sugarcane as a biofuel feedstock.

Research note: Can decreased transpiration limit plant nitrogen acquisition in elevated CO2?

N acquisition often lags behind accelerated C gain in plants exposed to CO2-enriched atmospheres. To help resolve the causes of this lag, we considered its possible link with stomatal closure, a common first-order response to elevated CO2 that can decrease transpiration. Specifically, we tested the hypothesis that declines in transpiration, and hence mass flow of soil solution, can decrease delivery of mobile N to the root and thereby limit plant N acquisition. We altered transpiration by manipulating relative humidity (RH) and atmospheric [CO2]. During a 7-d period, we grew potted cottonwood (Populus deltoides Bartr.) trees in humidified (76% RH) and non-humidified (43% RH) glasshouses ventilated with either CO2-enriched or non-enriched air (~1000 vs ~380µmol mol-1). We monitored effects of elevated humidity and/or CO2 on stomatal conductance, whole-plant transpiration, plant biomass gain, and N accumulation. To facilitate the latter, NO3- enriched in 15N (5 atom%) was added to all pots at the outset of the experiment. Transpiration and 15N accumulation decreased when either CO2 or humidity were elevated. The disparity between N accumulation and accelerated C gain in elevated CO2 led to a 19% decrease in shoot N concentration relative to ambient CO2. Across all treatments, 15N gain was positively correlated with root mass (P<0.0001), and a significant portion of the remaining variation (44%) was positively related to transpiration per unit root mass. At a given humidity, transpiration per unit leaf area was positively related to stomatal conductance. Thus, declines in plant N concentration and/or content under CO2 enrichment may be attributable in part to associated decreases in stomatal conductance and transpiration.