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1.
Nat Commun ; 15(1): 4335, 2024 May 21.
Artículo en Inglés | MEDLINE | ID: mdl-38773078

RESUMEN

The reactive singlet state of oxygen (O2) can decay to the triplet ground state nonradiatively in the presence of a solvent. There is a controversy about whether tunnelling is involved in this nonadiabatic spin-crossover process. Semiclassical instanton theory provides a reliable and practical computational method for elucidating the reaction mechanism and can account for nuclear quantum effects such as zero-point energy and multidimensional tunnelling. However, the previously developed instanton theory is not directly applicable to this system because of a branch-point singularity which appears in the flux correlation function. Here we derive a new instanton theory for cases dominated by the singularity, leading to a new picture of tunnelling in nonadiabatic processes. Together with multireference electronic-structure theory, this provides a rigorous framework based on first principles that we apply to calculate the decay rate of singlet oxygen in water. The results indicate a new reaction mechanism that is 27 orders of magnitude faster at room temperature than the classical process through the minimum-energy crossing point. We find significant heavy-atom tunnelling contributions as well as a large temperature-dependent H2O/D2O kinetic isotope effect of approximately 20, in excellent agreement with experiment.

2.
Chem Sci ; 14(39): 10777-10785, 2023 Oct 11.
Artículo en Inglés | MEDLINE | ID: mdl-37829019

RESUMEN

Thermally activated chemical reactions are typically understood in terms of overcoming potential-energy barriers. However, standard rate theories break down in the presence of a conical intersection (CI) because these processes are inherently nonadiabatic, invalidating the Born-Oppenheimer approximation. Moreover, CIs give rise to intricate nuclear quantum effects such as tunnelling and the geometric phase, which are neglected by standard trajectory-based simulations and remain largely unexplored in complex molecular systems. We present new semiclassical transition-state theories based on an extension of golden-rule instanton theory to describe nonadiabatic tunnelling through CIs and thus provide an intuitive picture for the reaction mechanism. We apply the method in conjunction with first-principles electronic-structure calculations to the electron transfer in the bis(methylene)-adamantyl cation. Our study reveals a strong competition between heavy-atom tunnelling and geometric-phase effects.

3.
J Phys Chem Lett ; 14(39): 8749-8754, 2023 Oct 05.
Artículo en Inglés | MEDLINE | ID: mdl-37738098

RESUMEN

The selective partial oxidation of methane to methanol has been a major chemistry challenge over the past several decades. The reason for this is that the weaker C-H bond of the desired product (methanol) is readily activated by the same catalyst used to activate the stronger C-H bond of methane. Quantum chemical calculations reveal how hydrogen-bonding interactions with the catalyst as well as other electronic and geometric effects slow the unwanted methanol oxidation reaction. Thus, the oxidation of methane (the tortoise in Aesop's fable) becomes faster than methanol (Aesop's hare), increasing the selectivity toward the desired product. Activation barriers are calculated for two different mechanisms (2+2 and radical), and reaction rates for the oxidation of the two molecules are obtained using semiclassical instanton theory to include tunneling effects for the proton transfers. The tunneling effects are shown to accelerate all reactions substantially but do not dramatically affect the selectivity.

4.
Angew Chem Int Ed Engl ; 61(33): e202206314, 2022 Aug 15.
Artículo en Inglés | MEDLINE | ID: mdl-35698730

RESUMEN

We simulate two recent matrix-isolation experiments at cryogenic temperatures, in which a nitrene undergoes spin crossover from its triplet state to a singlet state via quantum tunnelling. We detail the failure of the commonly applied weak-coupling method (based on a linear approximation of the potentials) in describing these deep-tunnelling reactions. The more rigorous approach of semiclassical golden-rule instanton theory in conjunction with double-hybrid density-functional theory and multireference perturbation theory does, however, provide rate constants and kinetic isotope effects in good agreement with experiment. In addition, these calculations locate the optimal tunnelling pathways, which provide a molecular picture of the reaction mechanism. The reactions involve substantial heavy-atom quantum tunnelling of carbon, nitrogen and oxygen atoms, which unexpectedly even continues to play a role at room temperature.

5.
Philos Trans A Math Phys Eng Sci ; 380(2223): 20200378, 2022 May 16.
Artículo en Inglés | MEDLINE | ID: mdl-35341312

RESUMEN

Instanton theory provides a semiclassical approximation for computing quantum tunnelling effects in complex molecular systems. It is typically applied to proton-transfer reactions for which the Born-Oppenheimer approximation is valid. However, many processes in physics, chemistry and biology, such as electron transfers, are non-adiabatic and are correctly described instead using Fermi's golden rule. In this work, we discuss how instanton theory can be generalized to treat these reactions in the golden-rule limit. We then extend the theory to treat fourth-order processes such as bridge-mediated electron transfer and apply the method to simulate an electron moving through a model system of three coupled quantum dots. By comparison with benchmark quantum calculations, we demonstrate that the instanton results are much more reliable than alternative approximations based on superexchange-mediated effective coupling or a classical sequential mechanism. This article is part of the theme issue 'Chemistry without the Born-Oppenheimer approximation'.


Asunto(s)
Electrones , Transporte de Electrón
6.
J Am Chem Soc ; 143(49): 20952-20961, 2021 Dec 15.
Artículo en Inglés | MEDLINE | ID: mdl-34846871

RESUMEN

The spin-crossover reaction of thiophosgene has drawn broad attention from both experimenters and theoreticians as a prime example of radiationless intramolecular decay via intersystem crossing. Despite multiple attempts over 20 years, theoretical predictions have typically been orders of magnitude in error relative to the experimentally measured triplet lifetime. We address the T1 → S0 transition by the first application of semiclassical golden-rule instanton theory in conjunction with on-the-fly electronic-structure calculations based on multireference perturbation theory. Our first-principles approach provides excellent agreement with the experimental rates. This was only possible because instanton theory goes beyond previous methods by locating the optimal tunneling pathway in full dimensionality and thus captures "corner cutting" effects. Since the reaction is situated in the Marcus inverted regime, the tunneling mechanism can be interpreted in terms of two classical trajectories, one traveling forward and one backward in imaginary time, which are connected by particle-antiparticle creation and annihilation events. The calculated mechanism indicates that the spin crossover is sped up by many orders of magnitude due to multidimensional quantum tunneling of the carbon atom even at room temperature.

7.
J Chem Phys ; 152(24): 244117, 2020 Jun 28.
Artículo en Inglés | MEDLINE | ID: mdl-32610962

RESUMEN

Marcus-Levich-Jortner (MLJ) theory is one of the most commonly used methods for including nuclear quantum effects in the calculation of electron-transfer rates and for interpreting experimental data. It divides the molecular problem into a subsystem treated quantum-mechanically by Fermi's golden rule and a solvent bath treated by classical Marcus theory. As an extension of this idea, we here present a "reduced" semiclassical instanton theory, which is a multiscale method for simulating quantum tunneling of the subsystem in molecular detail in the presence of a harmonic bath. We demonstrate that instanton theory is typically significantly more accurate than the cumulant expansion or the semiclassical Franck-Condon sum, which can give orders-of-magnitude errors and, in general, do not obey detailed balance. As opposed to MLJ theory, which is based on wavefunctions, instanton theory is based on path integrals and thus does not require solutions of the Schrödinger equation nor even global knowledge of the ground- and excited-state potentials within the subsystem. It can thus be efficiently applied to complex, anharmonic multidimensional subsystems without making further approximations. In addition to predicting accurate rates, instanton theory gives a high level of insight into the reaction mechanism by locating the dominant tunneling pathway as well as providing similar information to MLJ theory on the bath activation energy and the vibrational excitation energies of the subsystem states involved in the reaction.

8.
J Chem Phys ; 152(3): 034106, 2020 Jan 21.
Artículo en Inglés | MEDLINE | ID: mdl-31968950

RESUMEN

Fermi's golden rule defines the transition rate between weakly coupled states and can thus be used to describe a multitude of molecular processes including electron-transfer reactions and light-matter interaction. However, it can only be calculated if the wave functions of all internal states are known, which is typically not the case in molecular systems. Marcus theory provides a closed-form expression for the rate constant, which is a classical limit of the golden rule, and indicates the existence of a normal regime and an inverted regime. Semiclassical instanton theory presents a more accurate approximation to the golden-rule rate including nuclear quantum effects such as tunneling, which has so far been applicable to complex anharmonic systems in the normal regime only. In this paper, we extend the instanton method to the inverted regime and study the properties of the periodic orbit, which describes the tunneling mechanism via two imaginary-time trajectories, one of which now travels in negative imaginary time. It is known that tunneling is particularly prevalent in the inverted regime, even at room temperature, and thus, this method is expected to be useful in studying a wide range of molecular transitions occurring in this regime.

9.
Adv Mater ; 29(47)2017 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-29094392

RESUMEN

Flexible gallium nitride (GaN) thin films can enable future strainable and conformal devices for transmission of radio-frequency (RF) signals over large distances for more efficient wireless communication. For the first time, strainable high-frequency RF GaN devices are demonstrated, whose exceptional performance is enabled by epitaxial growth on 2D boron nitride for chemical-free transfer to a soft, flexible substrate. The AlGaN/GaN heterostructures transferred to flexible substrates are uniaxially strained up to 0.85% and reveal near state-of-the-art values for electrical performance, with electron mobility exceeding 2000 cm2 V-1 s-1 and sheet carrier density above 1.07 × 1013 cm-2 . The influence of strain on the RF performance of flexible GaN high-electron-mobility transistor (HEMT) devices is evaluated, demonstrating cutoff frequencies and maximum oscillation frequencies greater than 42 and 74 GHz, respectively, at up to 0.43% strain, representing a significant advancement toward conformal, highly integrated electronic materials for RF applications.

10.
Proc Natl Acad Sci U S A ; 106(36): 15418-23, 2009 Sep 08.
Artículo en Inglés | MEDLINE | ID: mdl-19706393

RESUMEN

The cardiovascular complications of obesity have prompted interest in dietary interventions to reduce weight, including low-carbohydrate diets that are generally high in protein and fat. However, little is known about the long-term effects of these diets on vascular health. We examined the cardiovascular effects of a low-carbohydrate, high-protein diet (LCHP) in the ApoE(-/-) mouse model of atherosclerosis and in a model of ischemia-induced neovascularization. Mice on a LCHP were compared with mice maintained on either the standard chow diet (SC) or the Western diet (WD) which contains comparable fat and cholesterol to the LCHP. LCHP-fed mice developed more aortic atherosclerosis and had an impaired ability to generate new vessels in response to tissue ischemia. These changes were not explained by alterations in serum cholesterol, inflammatory mediators or infiltrates, or oxidative stress. The LCHP diet substantially reduced the number of bone marrow and peripheral blood endothelial progenitor cells (EPCs), a marker of vascular regenerative capacity. EPCs from mice on a LCHP diet also manifest lower levels of activated (phosphorylated) Akt, a serine-threonine kinase important in EPC mobilization, proliferation, and survival. Taken together, these data demonstrate that in animal models LCHP diets have adverse vascular effects not reflected in serum markers and that nonlipid macronutrients can modulate vascular progenitor cells and pathophysiology.


Asunto(s)
Aterosclerosis/etiología , Dieta Baja en Carbohidratos/efectos adversos , Proteínas en la Dieta/efectos adversos , Neovascularización Fisiológica/efectos de los fármacos , Análisis de Varianza , Animales , Apolipoproteínas E/genética , Colesterol/sangre , Cromatografía Liquida , Proteínas en la Dieta/administración & dosificación , Citometría de Flujo , Ratones , Ratones Noqueados , Proteínas Proto-Oncogénicas c-akt/metabolismo , Células Madre/citología , Células Madre/efectos de los fármacos
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