Longitudinal and abattoir-based surveillance of MERS-CoV in camels in Jordan, 2018-2020.

To generate baseline information to help better understand the antibody kinetics and nasal shedding dynamics of MERS-CoV in camels in Jordan, a longitudinal surveillance study was conducted in two phases; phase 1 was between December, 2018 and January, 2019 and phase 2 between August and December 2020. In each phase, two camel herds were studied. These herds were located in Al-azraq and in Al-ramtha area and were named Al-azraq and Al-ramtha herds, respectively. The same camel herd of Al-zarqa area was sampled in both phases while two different camel herds, one in each phase, were sampled in Al-ramtha area. Blood and nasal swabs were collected from same selected animals in all visits to each herd in both phases. Additionally, nasal swabs and retropharyngeal lymph node tissue samples were collected from sixty-one camels slaughtered at Al-ramtha abattoir during phase 2 to enhance virus isolation opportunities and phylogenetic analysis. All sampled animals from Al-azraq camel herd were either borderline or seropositive on spike 1 based ELISA assay and negative on quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) in both phases. In Al-ramtha camel herds, an unsteady pattern prevailed in animals' seropositivity in both phases and viral RNA was detected in all animals in the end of phase 1 and in one animal during phase 2. For the seroconversion, anti-MERS-CoV spike 1 antibodies were detected in two animals in phase 1 in the first collection only. While, in phase 2, intermittent seroconversion pattern was observed in several samples over time of collections that ended with all animals became seropositive in the last collection (after nineteen days from viral RNA detection). In addition, viral RNA was detected in nasal swabs of 3 slaughtered camels. Phylogenetic analysis of a partial fragment of spike 1 gene sequences of all MERS-CoV isolates clustered together with clade B of MERS-CoV. This cluster contains all MERS-CoV sequences obtained either from camels or human sources in the Arabian Peninsula indicating the continuous circulation of this clade also in Jordan.

Limited Genetic Diversity Detected in Middle East Respiratory Syndrome-Related Coronavirus Variants Circulating in Dromedary Camels in Jordan.

Middle East respiratory syndrome-related coronavirus (MERS-CoV) is a persistent zoonotic pathogen with frequent spillover from dromedary camels to humans in the Arabian Peninsula, resulting in limited outbreaks of MERS with a high case-fatality rate. Full genome sequence data from camel-derived MERS-CoV variants show diverse lineages circulating in domestic camels with frequent recombination. More than 90% of the available full MERS-CoV genome sequences derived from camels are from just two countries, the Kingdom of Saudi Arabia (KSA) and United Arab Emirates (UAE). In this study, we employ a novel method to amplify and sequence the partial MERS-CoV genome with high sensitivity from nasal swabs of infected camels. We recovered more than 99% of the MERS-CoV genome from field-collected samples with greater than 500 TCID50 equivalent per nasal swab from camel herds sampled in Jordan in May 2016. Our subsequent analyses of 14 camel-derived MERS-CoV genomes show a striking lack of genetic diversity circulating in Jordan camels relative to MERS-CoV genome sequences derived from large camel markets in KSA and UAE. The low genetic diversity detected in Jordan camels during our study is consistent with a lack of endemic circulation in these camel herds and reflective of data from MERS outbreaks in humans dominated by nosocomial transmission following a single introduction as reported during the 2015 MERS outbreak in South Korea. Our data suggest transmission of MERS-CoV among two camel herds in Jordan in 2016 following a single introduction event.

Prevalence and risk factors of some arthropod-transmitted diseases in cattle and sheep in Jordan.

AIMS: The objectives of this study were to determine the prevalence and associated risk factors of bluetongue virus (BTV) in sheep and bovine ephemeral fever virus (BEFV) in dairy cattle in Jordan. MATERIALS AND METHODS: A simple randomized study was designed to collect 600 serum samples from sheep and 300 serum samples from dairy cattle located in the Northwestern parts of Jordan. In addition, data regarding farm management were collected using a pre-tested questionnaire through personal interview to determine potential risk factors. The seroprevalences of BEF and BTVs were determined using serum neutralization test and BTV group-specific competitive enzyme-linked immunosorbent assay, respectively. RESULTS: The overall seroprevalence of neutralizing antibodies against BEFV in dairy cattle was 45.37%. The overall seroprevalence of BTV group-specific antibodies in sheep was 47.8% (54% true seroprevalence). Logistic regression analysis identified geographic location (Irbid) (odds ratio [OR]=1.0; confidence interval [CI]=0.5-2.1), no use of disinfectants on the farm (OR=1.0; CI=0.05-0.1), and lack of veterinary services (OR=10; CI=3.5-13.2) as risk factors associated with high seropositivity against BTV in sheep. Geographic location (Jarash) (OR=3; CI=1.0-5.5), age of the animal (1-2 years of age (OR=1; CI=0.3-1.9), and lack of veterinary services (OR=9; CI=4-11) were identified as risk factors associated with high seroprevalence against BEFV in dairy cattle. CONCLUSION: Results of this study indicate that BEFV in dairy cattle and BTV in sheep are endemic in Northwestern regions of Jordan. Implementation of appropriate control measures is, therefore, required to reduce the adverse effects of these diseases on animal health and productivity.

High Prevalence of Middle East Respiratory Coronavirus in Young Dromedary Camels in Jordan.

Prevalence of Middle East respiratory syndrome coronavirus (MERS-CoV) was determined in 45 dromedary camels from two geographically separated herds in Jordan. Virus shedding was only detected in swabs obtained from the respiratory tract and primarily observed in camels younger than 3 years. MERS-CoV seroprevalence increased with age of camels. Bovine and sheep sera were seronegative. Phylogenetic analysis of partial S2 clustered the Jordanian MERS-CoV strains with contemporary MERS-CoV strains associated with nosocomial outbreaks.