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Genome Res ; 29(8): 1343-1351, 2019 08.
Artículo en Inglés | MEDLINE | ID: mdl-31186303

RESUMEN

Eukaryotic gene expression is often tightly regulated by interactions between transcription factors (TFs) and their DNA cis targets. Yeast one-hybrid (Y1H) is one of the most extensively used methods to discover these interactions. We developed a high-throughput meiosis-directed yeast one-hybrid system using the Magic Markers of the synthetic genetic array analysis. The system has a transcription factor-DNA interaction discovery rate twice as high as the conventional diploid-mating approach and a processing time nearly one-tenth of the haploid-transformation method. The system also offers the highest accuracy in identifying TF-DNA interactions that can be authenticated in vivo by chromatin immunoprecipitation. With these unique features, this meiosis-directed Y1H system is particularly suited for constructing novel and comprehensive genome-scale gene regulatory networks for various organisms.


Asunto(s)
ADN/genética , Análisis por Micromatrices/métodos , Saccharomyces cerevisiae/genética , Factores de Transcripción/genética , Técnicas del Sistema de Dos Híbridos , Animales , ADN/metabolismo , Regulación de la Expresión Génica , Redes Reguladoras de Genes , Marcadores Genéticos , Humanos , Meiosis , Análisis por Micromatrices/instrumentación , Plásmidos/química , Plásmidos/metabolismo , Ploidias , Populus/citología , Unión Proteica , Protoplastos/citología , Protoplastos/metabolismo , Saccharomyces cerevisiae/metabolismo , Factores de Tiempo , Factores de Transcripción/metabolismo
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