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1.
Micromachines (Basel) ; 15(4)2024 Apr 14.
Artículo en Inglés | MEDLINE | ID: mdl-38675336

RESUMEN

The well-known limitations of spray cooling on high-temperature solids at the Leidenfrost temperature point have been significantly improved by a composite structure of steel micropillar arrays and insulating thin films. However, the physical mechanism of a single droplet impact on the walls of high-temperature composite structures in spray cooling remains elusive. We have experimentally studied and quantified the kinematic and thermal transfer characteristics of a single droplet impacting high-temperature micropillar arrays with fiber membrane composite structures. In particular, micropillar arrays of ceramic materials of different shapes (rectangular and cylindrical) used in this study were made using the more flexible PµSL technique, for which precision reaches the micron level. The results show that the presence and different layouts (embedded or placed on top) of the fiber layer significantly affect the spreading coefficient and thermal transfer efficiency of the droplets after impact. In terms of kinematic characteristics, unrelated to the structure of micropillar arrays, compared to structures without film, the maximum spreading coefficient of droplets significantly increased by more than 40% (43% for rectangular, 46% for cylindrical) when the fiber film was placed on top, and increased by more than 20% (20% for rectangular, 33% for cylindrical) when the fiber film was embedded. In terms of thermal transfer characteristics, at a temperature of 200 °C, the presence of the fiber layer changed the wettability of the surface of the micropillar structure, leading to a certain extension of the total evaporation time of the droplets compared to the surface of the micropillar structure without film.

2.
Phys Chem Chem Phys ; 13(4): 1407-12, 2011 Jan 28.
Artículo en Inglés | MEDLINE | ID: mdl-21088782

RESUMEN

Brinker is the key target protein of the Drosophila Decapentaplegic morphogen signalling pathway. Brinker is widely expressed and can bind with DNA. NMR spectra suggest that apo-Brinker is intrinsically unstructured and undergoes a folding transition upon DNA-binding. However, the coupled mechanism of binding and folding is poorly understood. Here, we performed molecular dynamics (MD) simulations for both bound and apo-Brinker to study the mechanism. Room-temperature MD simulations suggest that Brinker becomes more rigid and stable upon DNA-binding. Kinetic analysis of high-temperature MD simulations shows that both bound and apo-Brinker unfold via a two-state process. The time scale of tertiary unfolding is significantly different between bound and apo-Brinker. The predicted Φ-values suggest that there are more residues with native-like transition state ensembles (TSEs) for bound Brinker than for apo-Brinker. The average RMSD differences between bound and apo-Brinker and Kolmogorov-Smirnov (KS) test analysis illustrate that Brinker folding upon DNA-binding might obey induced-fit mechanism based on MD simulations. These methods can be used for the research of other biomolecular folding upon ligand-binding.


Asunto(s)
ADN/metabolismo , Proteínas de Drosophila/química , Proteínas de Drosophila/metabolismo , Simulación de Dinámica Molecular , Proteínas Represoras/química , Proteínas Represoras/metabolismo , Animales , Apoproteínas/química , Apoproteínas/metabolismo , ADN/química , Drosophila melanogaster , Cinética , Conformación de Ácido Nucleico , Unión Proteica , Conformación Proteica , Pliegue de Proteína , Desplegamiento Proteico , Solventes/química , Especificidad por Sustrato
3.
J Biol Chem ; 284(36): 24394-405, 2009 Sep 04.
Artículo en Inglés | MEDLINE | ID: mdl-19535340

RESUMEN

SIRT3 is a major mitochondrial NAD(+)-dependent protein deacetylase playing important roles in regulating mitochondrial metabolism and energy production and has been linked to the beneficial effects of exercise and caloric restriction. SIRT3 is emerging as a potential therapeutic target to treat metabolic and neurological diseases. We report the first sets of crystal structures of human SIRT3, an apo-structure with no substrate, a structure with a peptide containing acetyl lysine of its natural substrate acetyl-CoA synthetase 2, a reaction intermediate structure trapped by a thioacetyl peptide, and a structure with the dethioacetylated peptide bound. These structures provide insights into the conformational changes induced by the two substrates required for the reaction, the acetylated substrate peptide and NAD(+). In addition, the binding study by isothermal titration calorimetry suggests that the acetylated peptide is the first substrate to bind to SIRT3, before NAD(+). These structures and biophysical studies provide key insight into the structural and functional relationship of the SIRT3 deacetylation activity.


Asunto(s)
Acetato CoA Ligasa/química , Proteínas Mitocondriales/química , NAD/química , Péptidos/química , Sirtuinas/química , Acetato CoA Ligasa/metabolismo , Acetilación , Humanos , Mitocondrias/enzimología , Proteínas Mitocondriales/metabolismo , Péptidos/metabolismo , Unión Proteica/fisiología , Estructura Cuaternaria de Proteína , Sirtuina 3 , Sirtuinas/metabolismo , Relación Estructura-Actividad
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