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1.
Bioorg Med Chem Lett ; 30(20): 127463, 2020 10 15.
Artículo en Inglés | MEDLINE | ID: mdl-32784090

RESUMEN

A series of mechanism-based heteroaryl urea fatty acid amide hydrolase (FAAH) inhibitors with fused bicyclic diamine cores is described. In contrast to compounds built around a piperazine core, most of the fused bicyclic diamine bearing analogs prepared exhibited greater potency against rFAAH than the human enzyme. Several compounds equipotent against both species were identified and profiled in vivo.


Asunto(s)
Amidohidrolasas/antagonistas & inhibidores , Diaminas/farmacología , Inhibidores Enzimáticos/farmacología , Urea/farmacología , Amidohidrolasas/metabolismo , Animales , Diaminas/química , Relación Dosis-Respuesta a Droga , Inhibidores Enzimáticos/síntesis química , Inhibidores Enzimáticos/química , Humanos , Estructura Molecular , Ratas , Relación Estructura-Actividad , Urea/análogos & derivados , Urea/química
2.
Blood Adv ; 4(4): 728-739, 2020 02 25.
Artículo en Inglés | MEDLINE | ID: mdl-32092140

RESUMEN

As with any anticoagulant, factor Xa (FXa) inhibitors are associated with a risk of major bleeding. Andexanet alfa is a recombinant modified human FXa lacking enzymatic activity, developed for reversal of FXa inhibitor-induced anticoagulation. In two phase 2, randomized, double-blind, placebo-controlled, single-center studies, different regimens of andexanet alfa were administered to healthy volunteers after therapeutic anticoagulation with rivaroxaban or edoxaban, and multiple anticoagulation reversal and safety end points were evaluated. Andexanet alfa rapidly and effectively reversed anticoagulation with both rivaroxaban and edoxaban. Within 2 minutes after bolus, anti-FXa activity decreased significantly, with maximum decreases of ≈93% (P < .05) and ≈82% (P < .05), respectively, compared with placebo. The stoichiometric ratios of andexanet alfa:total anticoagulant at maximum reversal of anti-FXa activity ranged from 1:1 to 1.3:1 for rivaroxaban and 1.41:1 to 2.58:1 for edoxaban. Sustained normalization of thrombin generation for ≈2 hours and sustained decrease in unbound anticoagulant (maximum ≈80%) for up to ≈4 hours following completion of andexanet alfa administration, compared with placebo, were observed when andexanet was administered as a bolus or as a bolus followed by continuous infusion. Andexanet alfa was well tolerated, and there were no serious adverse events or thrombotic events. Andexanet alfa has been approved in the United States and Europe for reversal of anticoagulation in patients treated with rivaroxaban or apixaban who experience life-threatening or uncontrolled bleeding. These studies were registered with clinicaltrials.gov (#NCT03578146 and #NCT03551743).


Asunto(s)
Factor Xa , Rivaroxabán , Anticoagulantes , Inhibidores del Factor Xa , Voluntarios Sanos , Humanos , Piridinas , Proteínas Recombinantes , Tiazoles , Estados Unidos
3.
Blood Adv ; 2(16): 2104-2114, 2018 08 28.
Artículo en Inglés | MEDLINE | ID: mdl-30135185

RESUMEN

Anticoagulants such as unfractionated heparin (UFH), low-molecular-weight heparins (LMWHs), fondaparinux, and direct oral anticoagulants (DOACs) targeting thrombin (IIa) or factor Xa (FXa) are widely used in prevention and treatment of thromboembolic disorders. However, anticoagulant-associated bleeding is a concern that demands monitoring and neutralization. Protamine, the UFH antidote, has limitations, while there is no antidote available for certain direct FXa inhibitors. Improved antidotes in development include UHRA (Universal Heparin Reversal Agent) for all heparin anticoagulants; andexanet alfa (andexanet), a recombinant antidote for both direct FXa inhibitors and LMWHs; and ciraparantag (PER977), a small-molecule antidote for UFH, LMWHs, and certain DOACs. The binding affinities of these antidotes for their presumed anticoagulant targets have not been compared. Here, isothermal titration calorimetry (ITC) was used to determine the affinity of each antidote for its putative targets. Clotting and chromogenic FXa assays were used to characterize neutralization activity, and electron microscopy was used to visualize the effect of each antidote on clot morphology in the absence or presence of anticoagulant. ITC confirmed binding of UHRA to all heparins, and binding of andexanet to edoxaban and rivaroxaban, and to the antithrombin-enoxaparin complex. PER977 was found to bind heparins weakly, but not the direct FXa inhibitors studied. For UHRA and andexanet, an affinity at or below the micromolar level was found to correlate with neutralization activity, while no reversal activity was observed for the PER977/anticoagulant systems. Standard metrics of clot structure were found to correlate weakly with PER977's activity. This is the first study comparing 3 antidotes in development, with each exerting activity through a distinct mechanism.


Asunto(s)
Arginina/análogos & derivados , Coagulación Sanguínea/efectos de los fármacos , Dendrímeros/farmacología , Inhibidores del Factor Xa/farmacología , Factor Xa/farmacología , Heparina/farmacología , Piperazinas/farmacología , Proteínas Recombinantes/farmacología , Administración Oral , Arginina/farmacología , Humanos
4.
Blood Adv ; 1(21): 1827-1838, 2017 Sep 26.
Artículo en Inglés | MEDLINE | ID: mdl-29296829

RESUMEN

Direct factor Xa (FXa) inhibitors lack a specific reversal agent for emergencies such as major bleeding or urgent surgery. Andexanet alfa, a modified, catalytically inactive, recombinant human FXa derivative, reverses anticoagulant effect by binding and sequestering FXa inhibitors. This original report of safety and dose-finding, phase 1 and 2 randomized, double-blind, placebo-controlled studies, investigated various doses of andexanet in healthy volunteers. Phase 1 evaluated the safety and pharmacokinetics of andexanet (n = 24) or placebo (n = 8). In phase 2, andexanet (n = 36) or placebo (n = 18) was administered following steady-state apixaban dosing (5 mg twice daily for 6 days); safety, pharmacokinetics, and pharmacodynamics were assessed. Andexanet plasma concentration increased proportionally with dose, with rapid elimination (terminal elimination half-life, 4.35-7.5 hours). Following apixaban treatment, andexanet rapidly (≤2 minutes) and dose dependently reduced unbound apixaban concentration vs placebo (51% to 89% vs 5% reduction; all P < .05), decreased anti-FXa activity (67.8% to 95.0% vs 7.1% reduction; all P < .05), and restored thrombin generation in 67% to 100% vs 6% of subjects (all P < .01), maintaining these effects during continuous 45- and 120-minute infusions. Andexanet was well tolerated. Nine subjects had mild/moderate infusion reactions not associated with hemodynamic changes or respiratory compromise that generally resolved without intervention or dose reduction. There were no thrombotic events or other serious safety issues. In conclusion, andexanet reversed apixaban-mediated effects on pharmacodynamic markers of anticoagulation in healthy volunteers within minutes after administration and for the duration of infusion. This trial was registered at www.clinicaltrials.gov as #NCT01758432.

5.
Bioorg Med Chem Lett ; 26(13): 3109-3114, 2016 07 01.
Artículo en Inglés | MEDLINE | ID: mdl-27189675

RESUMEN

The SAR of brain penetration for a series of heteroaryl piperazinyl- and piperadinyl-urea fatty acid amide hydrolase (FAAH) inhibitors is described. Brain/plasma (B/P) ratios ranging from >4:1 to as low as 0.02:1 were obtained through relatively simple structural changes to various regions of the heteroaryl urea scaffold. It was not possible to predict the degree of central nervous system (CNS) penetration from the volumes of distribution (Vd) obtained from pharmacokinetic (PK) experiments as very high Vds did not correlate with high B/P ratios. Similarly, calculated topological polar surface areas (TPSAs) did not consistently correlate with the degree of brain penetration. The lowest B/P ratios were observed for those compounds that were significantly ionized at physiological pH. However, as this class of compounds inhibits the FAAH enzyme through covalent modification, low B/P ratios did not preclude effective central target engagement.


Asunto(s)
Amidohidrolasas/antagonistas & inhibidores , Encéfalo/efectos de los fármacos , Inhibidores Enzimáticos/farmacología , Urea/farmacología , Amidohidrolasas/metabolismo , Encéfalo/metabolismo , Relación Dosis-Respuesta a Droga , Inhibidores Enzimáticos/síntesis química , Inhibidores Enzimáticos/química , Humanos , Estructura Molecular , Relación Estructura-Actividad , Urea/análogos & derivados , Urea/química
6.
ACS Med Chem Lett ; 6(12): 1204-8, 2015 Dec 10.
Artículo en Inglés | MEDLINE | ID: mdl-26713105

RESUMEN

The pre-clinical characterization of the aryl piperazinyl urea inhibitor of fatty acid amide hydrolase (FAAH) JNJ-42165279 is described. JNJ-42165279 covalently inactivates the FAAH enzyme, but is highly selective with regard to other enzymes, ion channels, transporters, and receptors. JNJ-42165279 exhibited excellent ADME and pharmacodynamic properties as evidenced by its ability to block FAAH in the brain and periphery of rats and thereby cause an elevation of the concentrations of anandamide (AEA), oleoyl ethanolamide (OEA), and palmitoyl ethanolamide (PEA). The compound was also efficacious in the spinal nerve ligation (SNL) model of neuropathic pain. The combination of good physical, ADME, and PD properties of JNJ-42165279 supported it entering the clinical portfolio.

7.
Bioorg Med Chem Lett ; 24(5): 1280-4, 2014 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-24513048
8.
Bioorg Med Chem Lett ; 24(3): 737-41, 2014 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-24433863

RESUMEN

A series of mechanism based heteroaryl urea fatty acid amide hydrolase (FAAH) inhibitors with spirocyclic diamine cores is described. A potent member of this class, (37), was found to inhibit FAAH centrally, elevate the brain levels of three fatty acid ethanolamides [FAAs: anandamide (AEA), oleoyl ethanolamide (OEA) and palmitoyl ethanolamide (PEA)], and was moderately efficacious in a rat model of neuropathic pain.


Asunto(s)
Amidohidrolasas/antagonistas & inhibidores , Azetidinas/química , Azetidinas/farmacología , Diaminas/síntesis química , Compuestos Heterocíclicos/síntesis química , Compuestos de Espiro/síntesis química , Urea/análogos & derivados , Administración Oral , Animales , Azetidinas/farmacocinética , Encéfalo/enzimología , Encéfalo/metabolismo , Ciclización , Diaminas/química , Diaminas/farmacología , Activación Enzimática/efectos de los fármacos , Compuestos Heterocíclicos/química , Compuestos Heterocíclicos/farmacología , Estructura Molecular , Ratas , Compuestos de Espiro/química , Compuestos de Espiro/farmacología , Urea/química , Urea/farmacocinética , Urea/farmacología
9.
Nat Med ; 19(4): 446-51, 2013 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-23455714

RESUMEN

Inhibitors of coagulation factor Xa (fXa) have emerged as a new class of antithrombotics but lack effective antidotes for patients experiencing serious bleeding. We designed and expressed a modified form of fXa as an antidote for fXa inhibitors. This recombinant protein (r-Antidote, PRT064445) is catalytically inactive and lacks the membrane-binding γ-carboxyglutamic acid domain of native fXa but retains the ability of native fXa to bind direct fXa inhibitors as well as low molecular weight heparin-activated antithrombin III (ATIII). r-Antidote dose-dependently reversed the inhibition of fXa by direct fXa inhibitors and corrected the prolongation of ex vivo clotting times by such inhibitors. In rabbits treated with the direct fXa inhibitor rivaroxaban, r-Antidote restored hemostasis in a liver laceration model. The effect of r-Antidote was mediated by reducing plasma anti-fXa activity and the non-protein bound fraction of the fXa inhibitor in plasma. In rats, r-Antidote administration dose-dependently and completely corrected increases in blood loss resulting from ATIII-dependent anticoagulation by enoxaparin or fondaparinux. r-Antidote has the potential to be used as a universal antidote for a broad range of fXa inhibitors.


Asunto(s)
Anticoagulantes/antagonistas & inhibidores , Antídotos/farmacología , Inhibidores del Factor Xa , Proteínas Recombinantes/farmacología , Animales , Benzamidas/antagonistas & inhibidores , Relación Dosis-Respuesta a Droga , Enoxaparina/antagonistas & inhibidores , Factor Xa/farmacología , Fondaparinux , Hemorragia/tratamiento farmacológico , Hemostasis/efectos de los fármacos , Masculino , Ratones , Ratones Endogámicos C57BL , Morfolinas/antagonistas & inhibidores , Polisacáridos/antagonistas & inhibidores , Pirazoles/antagonistas & inhibidores , Piridinas/antagonistas & inhibidores , Piridonas/antagonistas & inhibidores , Conejos , Ratas , Ratas Sprague-Dawley , Rivaroxabán , Tiofenos/antagonistas & inhibidores
10.
Bioorg Med Chem Lett ; 22(24): 7357-62, 2012 Dec 15.
Artículo en Inglés | MEDLINE | ID: mdl-23141911

RESUMEN

The structure-activity relationships for a series of heteroaryl urea inhibitors of fatty acid amide hydrolase (FAAH) are described. Members of this class of inhibitors have been shown to inactivate FAAH by covalent modification of an active site serine with subsequent release of an aromatic amine from the urea electrophile. Systematic Ames II testing guided the optimization of urea substituents by defining the structure-mutagenicity relationships for the released aromatic amine metabolites. Potent FAAH inhibitors were identified having heteroaryl amine leaving groups that were non-mutagenic in the Ames II assay.


Asunto(s)
Amidohidrolasas/antagonistas & inhibidores , Aminas/metabolismo , Inhibidores Enzimáticos/farmacología , Oxigenasas de Función Mixta/metabolismo , Mutágenos/metabolismo , Mutágenos/farmacología , Urea/farmacología , Amidohidrolasas/metabolismo , Animales , Relación Dosis-Respuesta a Droga , Inhibidores Enzimáticos/síntesis química , Inhibidores Enzimáticos/química , Humanos , Estructura Molecular , Pruebas de Mutagenicidad , Ratas , Relación Estructura-Actividad , Urea/análogos & derivados , Urea/química
11.
ACS Med Chem Lett ; 3(10): 823-7, 2012 Oct 11.
Artículo en Inglés | MEDLINE | ID: mdl-24900385

RESUMEN

A series of aryl piperazinyl ureas that act as covalent inhibitors of fatty acid amide hydrolase (FAAH) is described. A potent and selective (does not inhibit FAAH-2) member of this class, JNJ-40355003, was found to elevate the plasma levels of three fatty acid amides: anandamide, oleoyl ethanolamide, and palmitoyl ethanolamide, in the rat, dog, and cynomolgous monkey. The elevation of the levels of these lipids in the plasma of monkeys suggests that FAAH-2 may not play a significant role in regulating plasma levels of fatty acid ethanolamides in primates.

12.
J Biol Chem ; 284(1): 414-425, 2009 Jan 02.
Artículo en Inglés | MEDLINE | ID: mdl-18984595

RESUMEN

LpxE, a membrane-bound phosphatase found in Rhizobium leguminosarum and some other Gram-negative bacteria, selectively dephosphorylates the 1-position of lipid A on the outer surface of the inner membrane. LpxE belongs to the family of lipid phosphate phosphatases that contain a tripartite active site motif and six predicted transmembrane helices. Here we report the purification and characterization of R. leguminosarum LpxE. A modified lpxE gene, encoding a protein with an N-terminal His6 tag, was expressed in Escherichia coli. The protein was solubilized with Triton X-100 and purified to near-homogeneity. Gel electrophoresis reveals a molecular weight consistent with the predicted 31 kDa. LpxE activity is dependent upon Triton X-100, optimal near pH 6.5, and Mg2+-independent. The H197A and R133A substitutions inactivate LpxE, as does treatment with diethyl pyrocarbonate. In a mixed micelle assay system, the apparent Km for the precursor lipid IV(A) is 11 microm. Substrates containing the 3-deoxy-d-manno-oct-2-ulosonic acid disaccharide are dephosphorylated at similar rates to lipid IV(A), whereas glycerophospholipids like phosphatidic acid or phosphatidylglycerol phosphate are very poor substrates. However, an LpxE homologue present in Agrobacterium tumefaciens is selective for phosphatidylglycerol phosphate, demonstrating the importance of determining substrate specificity before assigning the functions of LpxE-related proteins. The availability of purified LpxE will facilitate the preparation of novel 1-dephosphorylated lipid A molecules that are not readily accessible by chemical methods.


Asunto(s)
Proteínas Bacterianas/química , Proteínas Bacterianas/aislamiento & purificación , Monoéster Fosfórico Hidrolasas/química , Monoéster Fosfórico Hidrolasas/aislamiento & purificación , Rhizobium leguminosarum/enzimología , Agrobacterium tumefaciens/enzimología , Agrobacterium tumefaciens/genética , Sustitución de Aminoácidos , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Activación Enzimática/genética , Concentración de Iones de Hidrógeno , Cinética , Lípido A/química , Lípido A/metabolismo , Mutación Missense , Monoéster Fosfórico Hidrolasas/genética , Monoéster Fosfórico Hidrolasas/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo , Rhizobium leguminosarum/genética , Homología de Secuencia de Aminoácido , Especificidad de la Especie , Especificidad por Sustrato
13.
Anesth Analg ; 108(1): 316-29, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-19095868

RESUMEN

Fatty acid amide hydrolase (FAAH) is an integral membrane enzyme within the amidase-signature family. It catalyzes the hydrolysis of several endogenous biologically active lipids, including anandamide (arachidonoyl ethanolamide), oleoyl ethanolamide, and palmitoyl ethanolamide. These endogenous FAAH substrates have been shown to be involved in a variety of physiological and pathological processes, including synaptic regulation, regulation of sleep and feeding, locomotor activity, pain and inflammation. Here we describe the biochemical and biological properties of a potent and selective FAAH inhibitor, 4-(3-phenyl-[1,2,4]thiadiazol-5-yl)-piperazine-1-carboxylic acid phenylamide (JNJ-1661010). The time-dependence of apparent IC(50) values at rat and human recombinant FAAH, dialysis and mass spectrometry data indicate that the acyl piperazinyl fragment of JNJ-1661010 forms a covalent bond with the enzyme. This bond is slowly hydrolyzed, with release of the piperazinyl fragment and recovery of enzyme activity. The lack of inhibition observed in a rat liver esterase assay suggests that JNJ-1661010 is not a general esterase inhibitor. JNJ-1661010 is >100-fold preferentially selective for FAAH-1 when compared to FAAH-2. JNJ-1661010 dose-dependently increases arachidonoyl ethanolamide, oleoyl ethanolamide, and palmitoyl ethanolamide in the rat brain. The compound attenuates tactile allodynia in the rat mild thermal injury model of acute tissue damage and in the rat spinal nerve ligation (Chung) model of neuropathic pain. JNJ-1661010 also diminishes thermal hyperalgesia in the inflammatory rat carrageenan paw model. These data suggest that FAAH inhibitors with modes of action similar to JNJ-1661010 may be useful clinically as broad-spectrum analgesics.


Asunto(s)
Amidohidrolasas/antagonistas & inhibidores , Analgésicos/farmacología , Encéfalo/efectos de los fármacos , Inhibidores Enzimáticos/farmacología , Dolor/prevención & control , Piperazinas/farmacología , Tiadiazoles/farmacología , Amidas , Amidohidrolasas/genética , Amidohidrolasas/metabolismo , Animales , Ácidos Araquidónicos/metabolismo , Encéfalo/enzimología , Carragenina , Modelos Animales de Enfermedad , Relación Dosis-Respuesta a Droga , Endocannabinoides , Etanolaminas , Calor , Humanos , Hidrólisis , Isoenzimas , Cinética , Masculino , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Neuralgia/etiología , Neuralgia/prevención & control , Ácidos Oléicos/metabolismo , Dolor/etiología , Dimensión del Dolor , Umbral del Dolor/efectos de los fármacos , Ácidos Palmíticos/metabolismo , Alcamidas Poliinsaturadas/metabolismo , Ratas , Ratas Sprague-Dawley , Tiempo de Reacción/efectos de los fármacos , Proteínas Recombinantes/antagonistas & inhibidores
15.
Biochemistry ; 47(24): 6451-9, 2008 Jun 17.
Artículo en Inglés | MEDLINE | ID: mdl-18500818

RESUMEN

Deuterium exchange mass spectrometric evaluation of the cobra venom (Naja naja naja) group IA phospholipase A 2 (GIA PLA 2) was carried out in the presence of metal ions Ca (2+) and Ba (2+) and phospholipid vesicles. Novel conditions for digesting highly disulfide bonded proteins and a methodology for studying protein-lipid interactions using deuterium exchange have been developed. The enzyme exhibits unexpectedly slow rates of exchange in the two large alpha-helices of residues 43-53 and 89-101, which suggests that these alpha-helices are highly rigidified by the four disulfide bonds in this region. The binding of Ca (2+) or Ba (2+) ions decreased the deuterium exchange rates for five regions of the protein (residues 24-27, 29-40, 43-53, 103-110, and 111-114). The magnitude of the changes was the same for both ions with the exception of regions of residues 24-27 and 103-110 which showed greater changes for Ca (2+). The crystal structure of the N. naja naja GIA PLA 2 contains a single Ca (2+) bound in the catalytic site, but the crystal structures of related PLA 2s contain a second Ca (2+) binding site. The deuterium exchange studies reported here clearly show that in solution the GIA PLA 2 does in fact bind two Ca (2+) ions. With dimyristoylphosphatidylcholine (DMPC) phospholipid vesicles with 100 microM Ca (2+) present at 0 degrees C, significant areas on the i-face of the enzyme showed decreases in the rate of exchange. These areas included regions of residues 3-8, 18-21, and 56-64 which include Tyr-3, Trp-61, Tyr-63, and Phe-64 proposed to penetrate the membrane surface. These regions also contained Phe-5 and Trp-19, proposed to bind the fatty acyl tails of substrate.


Asunto(s)
Bario/química , Calcio/química , Venenos Elapídicos/enzimología , Fosfolipasas A2 Grupo IA/química , Fosfolípidos/química , Espectrometría de Masas en Tándem , Liposomas Unilamelares/química , Secuencia de Aminoácidos , Animales , Bario/metabolismo , Calcio/metabolismo , Cationes Bivalentes/metabolismo , Medición de Intercambio de Deuterio , Fosfolipasas A2 Grupo IA/metabolismo , Datos de Secuencia Molecular , Fragmentos de Péptidos/química , Fragmentos de Péptidos/metabolismo , Mapeo Peptídico , Fosfolípidos/metabolismo , Unión Proteica , Espectrometría de Masas en Tándem/métodos , Liposomas Unilamelares/metabolismo
16.
J Biol Chem ; 279(53): 55780-91, 2004 Dec 31.
Artículo en Inglés | MEDLINE | ID: mdl-15489235

RESUMEN

Pathogenic bacteria modify the lipid A portion of their lipopolysaccharide to help evade the host innate immune response. Modification of the negatively charged phosphate groups of lipid A aids in resistance to cationic antimicrobial peptides targeting the bacterial cell surface. The lipid A of Helicobacter pylori contains a phosphoethanolamine (pEtN) unit directly linked to the 1-position of the disaccharide backbone. This is in contrast to the pEtN units found in other pathogenic Gram-negative bacteria, which are attached to the lipid A phosphate group to form a pyrophosphate linkage. This study describes two enzymes involved in the periplasmic modification of the 1-phosphate group of H. pylori lipid A. By using an in vitro assay system, we demonstrate the presence of lipid A 1-phosphatase activity in membranes of H. pylori. In an attempt to identify genes encoding possible lipid A phosphatases, we cloned four putative orthologs of Escherichia coli pgpB, the phosphatidylglycerol-phosphate phosphatase, from H. pylori 26695. One of these orthologs, Hp0021, is the structural gene for the lipid A 1-phosphatase and is required for removal of the 1-phosphate group from mature lipid A in an in vitro assay system. Heterologous expression of Hp0021 in E. coli resulted in the highly selective removal of the 1-phosphate group from E. coli lipid A, as demonstrated by mass spectrometry. We also identified the structural gene for the H. pylori lipid A pEtN transferase (Hp0022). Mass spectrometric analysis of the lipid A isolated from E. coli expressing Hp0021 and Hp0022 shows the addition of a single pEtN group at the 1-position, confirming that Hp0022 is responsible for the addition of a pEtN unit at the 1-position in H. pylori lipid A. In summary, we demonstrate that modification of the 1-phosphate group of H. pylori lipid A requires two enzymatic steps.


Asunto(s)
Helicobacter pylori/metabolismo , Lípido A/química , Transportadoras de Casetes de Unión a ATP/química , Péptidos Catiónicos Antimicrobianos/química , Proteínas Bacterianas/química , Secuencia de Carbohidratos , Membrana Celular/metabolismo , Sistema Libre de Células , Clonación Molecular , ADN/química , Detergentes/farmacología , Escherichia coli/metabolismo , Etanolaminas/química , Vectores Genéticos/metabolismo , Genotipo , Espectrometría de Masas , Modelos Biológicos , Modelos Químicos , Datos de Secuencia Molecular , Oligonucleótidos/química , Fosfatos/química , Monoéster Fosfórico Hidrolasas/química , Regiones Promotoras Genéticas , Conformación Proteica , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Especificidad por Sustrato , Factores de Tiempo
17.
J Biol Chem ; 279(47): 49470-8, 2004 Nov 19.
Artículo en Inglés | MEDLINE | ID: mdl-15339914

RESUMEN

The lipid A anchor of Francisella tularensis lipopolysaccharide (LPS) lacks both phosphate groups present in Escherichia coli lipid A. Membranes of Francisella novicida (an environmental strain related to F. tularensis) contain enzymes that dephosphorylate lipid A and its precursors at the 1- and 4'-positions. We now report the cloning and characterization of a membrane-bound phosphatase of F. novicida that selectively dephosphorylates the 1-position. By transferring an F. novicida genomic DNA library into E. coli and selecting for low level polymyxin resistance, we isolated FnlpxE as the structural gene for the 1-phosphatase, an inner membrane enzyme of 239 amino acid residues. Expression of FnlpxE in a heptose-deficient mutant of E. coli caused massive accumulation of a previously uncharacterized LPS molecule, identified by mass spectrometry as 1-dephospho-Kdo2-lipid A. The predicted periplasmic orientation of the FnLpxE active site suggested that LPS export might be required for 1-dephosphorylation of lipid A. LPS and phospholipid export depend on the activity of MsbA, an essential inner membrane ABC transporter. Expression of FnlpxE in the msbA temperature-sensitive E. coli mutant WD2 resulted in 90% 1-dephosphorylation of lipid A at the permissive temperature (30 degrees C). However, the 1-phosphate group of newly synthesized lipid A was not cleaved at the nonpermissive temperature (44 degrees C). Our findings provide the first direct evidence that lipid A 1-dephosphorylation catalyzed by LpxE occurs on the periplasmic surface of the inner membrane.


Asunto(s)
Transportadoras de Casetes de Unión a ATP/fisiología , Proteínas Bacterianas/fisiología , Membrana Celular/metabolismo , Escherichia coli/metabolismo , Francisella/metabolismo , Lípido A/metabolismo , Proteínas de la Membrana/química , Proteínas de la Membrana/genética , Periplasma/metabolismo , Monoéster Fosfórico Hidrolasas/química , Monoéster Fosfórico Hidrolasas/genética , Secuencia de Aminoácidos , Secuencia de Carbohidratos , Proliferación Celular , Clonación Molecular , Electroforesis en Gel de Poliacrilamida , Lipopolisacáridos/química , Espectrometría de Masas , Modelos Biológicos , Datos de Secuencia Molecular , Mutación , Monoéster Fosfórico Hidrolasas/metabolismo , Fosforilación , Plásmidos/metabolismo , Polimixinas/farmacología , Homología de Secuencia de Aminoácido , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Temperatura , Factores de Tiempo
18.
J Biol Chem ; 279(24): 25411-9, 2004 Jun 11.
Artículo en Inglés | MEDLINE | ID: mdl-15044493

RESUMEN

LpxA of Escherichia coli catalyzes the acylation of the glucosamine 3-OH group of UDP-GlcNAc, using R-3-hydroxymyristoyl-acyl carrier protein (ACP) as the donor substrate. We now demonstrate that LpxA in cell extracts of Mesorhizobium loti and Leptospira interrogans, which synthesize lipid A molecules containing 2,3-diamino-2,3-dideoxy-d-glucopyranose (GlcN3N) units in place of glucosamine, do not acylate UDP-GlcNAc. Instead, these LpxA acyltransferases require a UDP-Glc-NAc derivative (designated UDP 2-acetamido-3-amino-2,3-dideoxy-alpha-d-glucopyranose or UDP-GlcNAc3N), characterized in the preceding paper, in which an amine replaces the glucosamine 3-OH group. L. interrogans LpxA furthermore displays absolute selectivity for 3-hydroxylauroyl-ACP as the donor, whereas M. loti LpxA functions almost equally well with 10-, 12-, and 14-carbon 3-hydroxyacyl-ACPs. The substrate selectivity of L. interrogans LpxA is consistent with the structure of L. interrogans lipid A. The mechanism of L. interrogans LpxA appears to be similar to that of E. coli LpxA, given that the essential His(125) residue of E. coli LpxA is conserved and is also required for acyltransferase activity in L. interrogans. Acidithiobacillus ferrooxidans (an organism that makes lipid A molecules containing both GlcN and GlcN3N) has an ortholog of LpxA that is selective for UDP-GlcNAc3N, but the enzyme also catalyzes the acylation of UDP-GlcNAc at a slow rate. E. coli LpxA acylates UDP-GlcNAc and UDP-GlcNAc3N at comparable rates in vitro. However, UDP-GlcNAc3N is not synthesized in vivo, because E. coli lacks gnnA and gnnB. When the latter are supplied together with A. ferrooxidans lpxA, E. coli incorporates a significant amount of GlcN3N into its lipid A.


Asunto(s)
Aciltransferasas/fisiología , Proteínas Bacterianas/fisiología , Lípido A/biosíntesis , Uridina Difosfato N-Acetilglucosamina/metabolismo , Acidithiobacillus/enzimología , Secuencia de Aminoácidos , Clonación Molecular , Leptospira interrogans/enzimología , Lípido A/química , Datos de Secuencia Molecular , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
19.
J Biol Chem ; 278(41): 39269-79, 2003 Oct 10.
Artículo en Inglés | MEDLINE | ID: mdl-12869541

RESUMEN

Lipid A of Rhizobium leguminosarum, a nitrogen-fixing plant endosymbiont, displays several significant structural differences when compared with Escherichia coli. An especially striking feature of R. leguminosarum lipid A is that it lacks both the 1- and 4'-phosphate groups. Distinct lipid A phosphatases that attack either the 1 or the 4' positions have previously been identified in extracts of R. leguminosarum and Rhizobium etli but not Sinorhizobium meliloti or E. coli. Here we describe the identification of a hybrid cosmid (pMJK-1) containing a 25-kb R. leguminosarum 3841 DNA insert that directs the overexpression of the lipid A 1-phosphatase. Transfer of pMJK-1 into S. meliloti 1021 results in heterologous expression of 1-phosphatase activity, which is normally absent in extracts of strain 1021, and confers resistance to polymyxin. Sequencing of a 7-kb DNA fragment derived from the insert of pMJK-1 revealed the presence of a lipid phosphatase ortholog (designated LpxE). Expression of lpxE in E. coli behind the T7lac promoter results in the appearance of robust 1-phosphatase activity, which is normally absent in E. coli membranes. Matrix-assisted laser-desorption/time of flight and radiochemical analysis of the product generated in vitro from the model substrate lipid IVA confirms the selective removal of the 1-phosphate group. These findings show that lpxE is the structural gene for the 1-phosphatase. The availability of lpxE may facilitate the re-engineering of lipid A structures in diverse Gram-negative bacteria and allow assessment of the role of the 1-phosphatase in R. leguminosarum symbiosis with plants. Possible orthologs of LpxE are present in some intracellular human pathogens, including Francisella tularensis, Brucella melitensis, and Legionella pneumophila.


Asunto(s)
Lípido A/metabolismo , Monoéster Fosfórico Hidrolasas/genética , Monoéster Fosfórico Hidrolasas/metabolismo , Rhizobium leguminosarum/enzimología , Rhizobium leguminosarum/genética , Secuencia de Aminoácidos , Secuencia de Bases , Secuencia de Carbohidratos , Clonación Molecular , Cósmidos , ADN Bacteriano/genética , Genes Bacterianos , Lípido A/biosíntesis , Lípido A/química , Datos de Secuencia Molecular , Estructura Molecular , Monoéster Fosfórico Hidrolasas/química , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Sinorhizobium meliloti/genética , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
20.
J Biol Chem ; 278(14): 12120-9, 2003 Apr 04.
Artículo en Inglés | MEDLINE | ID: mdl-12531908

RESUMEN

An unusual feature of the lipid A from the plant endosymbionts Rhizobium etli and Rhizobium leguminosarum is the presence of a proximal sugar unit consisting of a 2-amino-2-deoxy-gluconate moiety in place of glucosamine. An outer membrane oxidase that generates the 2-amino-2-deoxy-gluconate unit from a glucosamine-containing precursor is present in membranes of R. leguminosarum and R. etli but not in S. meliloti or Escherichia coli. We now report the identification of a hybrid cosmid that directs the overexpression of this activity by screening 1800 lysates of individual colonies of a R. leguminosarum 3841 genomic DNA library in the host strain R. etli CE3. Two cosmids (p1S11D and p1U12G) were identified in this manner and transferred into S. meliloti, in which they also directed the expression of oxidase activity in the absence of any chromosomal background. Subcloning and sequencing of the oxidase gene on a 6.5-kb fragment derived from the approximately 20-kb insert in p1S11D revealed that the enzyme is encoded by a gene (lpxQ) that specifies a protein of 224 amino acid residues with a putative signal sequence cleavage site at position 28. Heterologous expression of lpxQ using the T7lac promoter system in E. coli resulted in the production of catalytically active oxidase that was localized in the outer membrane. A new outer membrane protein of the size expected for LpxQ was present in this construct and was subjected to microsequencing to confirm its identity and the site of signal peptide cleavage. LpxQ expressed in E. coli generates the same products as seen in R. leguminosarum membranes. LpxQ is dependent on O(2) for activity, as demonstrated by inhibition of the reaction under strictly anaerobic conditions. An ortholog of LpxQ is present in the genome of Agrobacterium tumefaciens, as shown by heterologous expression of oxidase activity in E. coli.


Asunto(s)
Proteínas de la Membrana Bacteriana Externa/genética , Glucosamina/análogos & derivados , Glucosamina/metabolismo , Lípido A/metabolismo , Oxidorreductasas/genética , Fosfotransferasas (Aceptor de Grupo Alcohol)/genética , Rhizobium leguminosarum/genética , Secuencia de Aminoácidos , Anaerobiosis , Proteínas de la Membrana Bacteriana Externa/metabolismo , Clonación Molecular , Desoxirribonucleasa HindIII , Escherichia coli , Regulación Bacteriana de la Expresión Génica , Regulación Enzimológica de la Expresión Génica , Glucosamina/química , Técnicas In Vitro , Espectrometría de Masas , Datos de Secuencia Molecular , Oxidorreductasas/metabolismo , Fosfotransferasas (Aceptor de Grupo Alcohol)/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Rhizobium leguminosarum/enzimología
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