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Fluorescence microscopy is of vital importance for understanding biological function. However most fluorescence experiments are only qualitative inasmuch as the absolute number of fluorescent particles can often not be determined. Additionally, conventional approaches to measuring fluorescence intensity cannot distinguish between two or more fluorophores that are excited and emit in the same spectral window, as only the total intensity in a spectral window can be obtained. Here we show that, by using photon number resolving experiments, we are able to determine the number of emitters and their probability of emission for a number of different species, all with the same measured spectral signature. We illustrate our ideas by showing the determination of the number of emitters per species and the probability of photon collection from that species, for one, two, and three otherwise unresolvable fluorophores. The convolution Binomial model is presented to model the counted photons emitted by multiple species. And then the Expectation-Maximization (EM) algorithm is used to match the measured photon counts to the expected convolution Binomial distribution function. In applying the EM algorithm, to leverage the problem of being trapped in a sub-optimal solution, the moment method is introduced in finding the initial guess of the EM algorithm. Additionally, the associated Cram\'er-Rao lower bound is derived and compared with the simulation results.
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Fluorescence microscopy is of vital importance for understanding biological function. However, most fluorescence experiments are only qualitative inasmuch as the absolute number of fluorescent particles can often not be determined. Additionally, conventional approaches to measuring fluorescence intensity cannot distinguish between two or more fluorophores that are excited and emit in the same spectral window, as only the total intensity in a spectral window can be obtained. Here we show that, by using photon number resolving experiments, we are able to determine the number of emitters and their probability of emission for a number of different species, all with the same measured spectral signature. We illustrate our ideas by showing the determination of the number of emitters per species and the probability of photon collection from that species, for one, two and three otherwise unresolvable fluorophores. The convolution binomial model is presented to represent the counted photons emitted by multiple species. Then, the expectation-maximization (EM) algorithm is used to match the measured photon counts to the expected convolution binomial distribution function. In applying the EM algorithm, to leverage the problem of being trapped in a sub-optimal solution, the moment method is introduced to yield an initial guess for the EM algorithm. Additionally, the associated Cramér-Rao lower bound is derived and compared with the simulation results.
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Inertial localisation is an important technique as it enables ego-motion estimation in conditions where external observers are unavailable. However, low-cost inertial sensors are inherently corrupted by bias and noise, which lead to unbound errors, making straight integration for position intractable. Traditional mathematical approaches are reliant on prior system knowledge, geometric theories and are constrained by predefined dynamics. Recent advances in deep learning, which benefit from ever-increasing volumes of data and computational power, allow for data-driven solutions that offer more comprehensive understanding. Existing deep inertial odometry solutions rely on estimating the latent states, such as velocity, or are dependent on fixed-sensor positions and periodic motion patterns. In this work, we propose taking the traditional state estimation recursive methodology and applying it in the deep learning domain. Our approach, which incorporates the true position priors in the training process, is trained on inertial measurements and ground truth displacement data, allowing recursion and learning both motion characteristics and systemic error bias and drift. We present two end-to-end frameworks for pose invariant deep inertial odometry that utilises self-attention to capture both spatial features and long-range dependencies in inertial data. We evaluate our approaches against a custom 2-layer Gated Recurrent Unit, trained in the same manner on the same data, and tested each approach on a number of different users, devices and activities. Each network had a sequence length weighted relative trajectory error mean ≤0.4594 m, highlighting the effectiveness of our learning process used in the development of the models.
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Inertial attitude estimation is a crucial component of many modern systems and applications. Attitude estimation from commercial-grade inertial sensors has been the subject of an abundance of research in recent years due to the proliferation of Inertial Measurement Units (IMUs) in mobile devices, such as the smartphone. Traditional methodologies involve probabilistic, iterative-state estimation; however, these approaches do not generalise well over changing motion dynamics and environmental conditions, as they require context-specific parameter tuning. In this work, we explore novel methods for attitude estimation from low-cost inertial sensors using a self-attention-based neural network, the Attformer. This paper proposes to part ways from the traditional cycle of continuous integration algorithms, and formulate it as an optimisation problem. This approach separates itself by leveraging attention operations to learn the complex patterns and dynamics associated with inertial data, allowing for the linear complexity in the dimension of the feature vector to account for these patterns. Additionally, we look at combining traditional state-of-the-art approaches with our self-attention method. These models were evaluated on entirely unseen sequences, over a range of different activities, users and devices, and compared with a recent alternate deep learning approach, the unscented Kalman filter and the iOS CoreMotion API. The inbuilt iOS had a mean angular distance from the true attitude of 117.31∘, the GRU 21.90∘, the UKF 16.38∘, the Attformer 16.28∘ and, finally, the UKF-Attformer had mean angular distance of 10.86∘. We show that this plug-and-play solution outperforms previous approaches and generalises well across different users, devices and activities.
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Acelerometría , Teléfono Inteligente , AlgoritmosRESUMEN
The fundamental understanding of biological pathways requires minimally invasive nanoscopic optical resolution imaging. Many approaches to high-resolution imaging rely on localization of single emitters, such as fluorescent molecules or quantum dots. Additionally, the exact determination of the number of such emitters in an imaging volume is essential for a number of applications; however, in standard intensity-based microscopy it is not possible to determine the number of individual emitters within a diffraction limited spot without initial knowledge of system parameters. Here we explore how quantum measurements of the emitted photons using photon number resolving detectors can be used to address this challenging task. In the proposed new approach, the problem of counting emitters reduces to the task of determining differences between the emitted photon distribution and the Poisson limit. We show that quantum measurements of the number of photons emitted from an ensemble of emitters enable the determination of both the number of emitters and the probability of emission. This method can be applied for any type of single-photon emitters. The scaling laws of this new approach are presented by the Cramer-Rao Lower Bounds, and this technique has great potential in quantum optical imaging with nanoscopic resolution.
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This paper considers the two-dimensional (2D) anchorless localization problem for sensor networks in global positioning system (GPS)-denied environments. We present an efficient method, based on the multidimensional scaling (MDS) algorithm, in order to estimate the positions of the nodes in the network using measurements of the inter-node distances. The proposed method takes advantage of the mobility of the nodes to address the location ambiguity problem, i.e., rotation and flip ambiguity, which arises in the anchorless MDS algorithm. Knowledge of the displacement of the moving node is used to produce an analytical solution for the noise-free case. Subsequently, a least squares estimator is presented for the noisy scenario and the associated closed-form solution derived. The simulations show that the proposed algorithm accurately and efficiently estimates the locations of nodes, outperforming alternative methods.
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Wooden power poles and their ongoing inspection represent a significant investment for most electrical power utilities. This study explored the potential for using microwave fields to non-invasively assess the state of hardwood power poles in a field experiment. Two strategies were assessed: 2.4 GHz microwave field transmission through the pole; and mutual coupling between antennae using a 10.525 GHz radar module applied to the surface of the pole. Both systems distinguished between sound hardwood poles and those which were compromised by decay and subterranean termite attack and infestation.
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Cooperative positioning (CP) utilises information sharing among multiple nodes to enable positioning in Global Navigation Satellite System (GNSS)-denied environments. This paper reports the performance of a CP system for pedestrians using Ultra-Wide Band (UWB) technology inGNSS-denied environments. This data set was collected as part of a benchmarking measurementcampaign carried out at the Ohio State University in October 2017. Pedestrians were equippedwith a variety of sensors, including two different UWB systems, on a specially designed helmetserving as a mobile multi-sensor platform for CP. Different users were walking in stop-and-go modealong trajectories with predefined checkpoints and under various challenging environments. Inthe developed CP network, both Peer-to-Infrastructure (P2I) and Peer-to-Peer (P2P) measurementsare used for positioning of the pedestrians. It is realised that the proposed system can achievedecimetre-level accuracies (on average, around 20 cm) in the complete absence of GNSS signals,provided that the measurements from infrastructure nodes are available and the network geometryis good. In the absence of these good conditions, the results show that the average accuracydegrades to meter level. Further, it is experimentally demonstrated that inclusion of P2P cooperativerange observations further enhances the positioning accuracy and, in extreme cases when only oneinfrastructure measurement is available, P2P CP may reduce positioning errors by up to 95%. Thecomplete test setup, the methodology for development, and data collection are discussed in thispaper. In the next version of this system, additional observations such as theWi-Fi, camera, and othersignals of opportunity will be included.
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The diverse operating environments change GNSS measurement noise covariance in real time, and different GNSS techniques hold different measurement noise covariance as well. Mismodelling the covariance causes undependable filtering results and even degenerates the GNSS/INS Particle Filter (PF) process, due to the fact that INS error-state noise covariance is much smaller than that of GNSS measurement noise. It also makes the majority of existing methods for adaptively adjusting filter parameters incapable of performing well. In this paper, a feasible Digital Track Map-aided (DTM-aided) adaptive extended Kalman particle filter method is introduced in GNSS/INS integration in order to adjust GNSS measurement noise covariance in real time, and the GNSS down-direction offset is also estimated along with every sampling period through making full use of DTM information. The proposed approach is successfully examined in a railway environment, and the on-site experimental results reveal that the adaptive approach holds better positioning performance in comparison to the methods without adaptive adjustment. Improvements of 62.4% and 14.9% in positioning accuracy are obtained in contrast to Standard Point Positioning (SPP) and Precise Point Positioning (PPP), respectively. The proposed adaptive method takes advantage of DTM information and is able to automatically adapt to complex railway environments and different GNSS techniques.
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The extensive deployment of wireless infrastructure provides a low-cost way to track mobile users in indoor environment. This paper demonstrates a prototype model of an accurate and reliable room location awareness system in a real public environment in which three typical problems arise. Firstly, a massive number of access points (APs) can be sensed leading to a high-dimensional classification problem. Secondly, heterogeneous devices record different received signal strength (RSS) levels because of the variations in chip-set and antenna attenuation. Thirdly, APs are not necessarily visible in every scanning cycle leading to missing data issue. This paper presents a probabilistic Wi-Fi fingerprinting method in a hidden Markov model (HMM) framework for mobile user tracking. To account for spatial correlation of the signal strengths from multiple APs, a Multivariate Gaussian Mixture Model (MVGMM) was fitted to model the probability distribution of RSS measurements in each cell. Furthermore, the unseen property of invisible AP was investigated in this research, and demonstrated the efficiency as a beneficial information to differentiate between cells. The proposed system is able to achieve comparable localisation performance. Filed test results achieve a reliable 97% localisation room level accuracy of multiple mobile users in a real university campus Wi-Fi network.
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The recognition of locomotion activities (e.g., walking, running, still) is important for a wide range of applications like indoor positioning, navigation, location-based services, and health monitoring. Recently, there has been a growing interest in activity recognition using accelerometer data. However, when utilizing only acceleration-based features, it is difficult to differentiate varying vertical motion states from horizontal motion states especially when conducting user-independent classification. In this paper, we also make use of the newly emerging barometer built in modern smartphones, and propose a novel feature called pressure derivative from the barometer readings for user motion state recognition, which is proven to be effective for distinguishing vertical motion states and does not depend on specific users' data. Seven types of motion states are defined and six commonly-used classifiers are compared. In addition, we utilize the motion state history and the characteristics of people's motion to improve the classification accuracies of those classifiers. Experimental results show that by using the historical information and human's motion characteristics, we can achieve user-independent motion state classification with an accuracy of up to 90.7%. In addition, we analyze the influence of the window size and smartphone pose on the accuracy.
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Acelerometría/instrumentación , Monitoreo Ambulatorio/instrumentación , Monitoreo Ambulatorio/métodos , Movimiento/fisiología , Procesamiento de Señales Asistido por Computador/instrumentación , Teléfono Inteligente , Algoritmos , HumanosRESUMEN
The utility and adoption of indoor localization applications have been limited due to the complex nature of the physical environment combined with an increasing requirement for more robust localization performance. Existing solutions to this problem are either too expensive or too dependent on infrastructure such as Wi-Fi access points. To address this problem, we propose APFiLoc-a low cost, smartphone-based framework for indoor localization. The key idea behind this framework is to obtain landmarks within the environment and to use the augmented particle filter to fuse them with measurements from smartphone sensors and map information. A clustering method based on distance constraints is developed to detect organic landmarks in an unsupervised way, and the least square support vector machine is used to classify seed landmarks. A series of real-world experiments were conducted in complex environments including multiple floors and the results show APFiLoc can achieve 80% accuracy (phone in the hand) and around 70% accuracy (phone in the pocket) of the error less than 2 m error without the assistance of infrastructure like Wi-Fi access points.