Global synthesis on the response of soil microbial necromass carbon to climate-smart agriculture.

Climate-smart agriculture (CSA) supports the sustainability of crop production and food security, and benefiting soil carbon storage. Despite the critical importance of microorganisms in the carbon cycle, systematic investigations on the influence of CSA on soil microbial necromass carbon and its driving factors are still limited. We evaluated 472 observations from 73 peer-reviewed articles to show that, compared to conventional practice, CSA generally increased soil microbial necromass carbon concentrations by 18.24%. These benefits to soil microbial necromass carbon, as assessed by amino sugar biomarkers, are complex and influenced by a variety of soil, climatic, spatial, and biological factors. Changes in living microbial biomass are the most significant predictor of total, fungal, and bacterial necromass carbon affected by CSA; in 61.9%-67.3% of paired observations, the CSA measures simultaneously increased living microbial biomass and microbial necromass carbon. Land restoration and nutrient management therein largely promoted microbial necromass carbon storage, while cover crop has a minor effect. Additionally, the effects were directly influenced by elevation and mean annual temperature, and indirectly by soil texture and initial organic carbon content. In the optimal scenario, the potential global carbon accrual rate of CSA through microbial necromass is approximately 980 Mt C year-1, assuming organic amendment is included following conservation tillage and appropriate land restoration. In conclusion, our study suggests that increasing soil microbial necromass carbon through CSA provides a vital way of mitigating carbon loss. This emphasizes the invisible yet significant influence of soil microbial anabolic activity on global carbon dynamics.

Spatio-temporal microbial regulation of aggregate-associated priming effects under contrasting tillage practices.

Tillage intensity significantly influences the heterogeneous distribution and dynamic changes of soil microorganisms, consequently shaping spatio-temporal patterns of SOC decomposition. However, little is known about the microbial mechanisms by which tillage intensity regulates the priming effect (PE) dynamics in heterogeneous spatial environments such as aggregates. Herein, a microcosm experiment was established by adding 13C-labeled straw residue to three distinct aggregate-size classes (i.e., mega-, macro-, and micro-aggregates) from two long-term contrasting tillage histories (no-till [NT] and conventional plow tillage [CT]) for 160 days to observe the spatio-temporal variations in PE. Metagenomic sequencing and Fourier transform mid-infrared techniques were used to assess the relative importance of C-degrading functional genes, microbial community succession, and SOC chemical composition in the aggregate-associated PE dynamics during straw decomposition. Spatially, straw addition induced a positive PE for all aggregates, with stronger PE occurring in larger aggregates, especially in CT soil compared to NT soil. Larger aggregates have more unique microbial communities enriched in genes for simple C degradation (e.g., E5.1.3.6, E2.4.1.7, pmm-pgm, and KduD in Nitrosospeera and Burkholderia), contributing to the higher short-term PE; however, CT soils harbored more genes for complex C degradation (e.g., TSTA3, fcl, pmm-pgm, and K06871 in Gammaproteobacteria and Phycicoccus), supporting a stronger long-term PE. Temporally, soil aggregates played a significant role in the early-stage PEs (i.e., < 59 days after residue addition) through co-metabolism and nitrogen (N) mining, as evidenced by the increased microbial biomass C and dissolved organic C (DOC) and reduced inorganic N with increasing aggregate-size class. At a later stage, however, the legacy effect of tillage histories controlled the PEs via microbial stoichiometry decomposition, as suggested by the higher DOC-to-inorganic N and DOC-to-available P stoichiometries in CT than NT. Our study underscores the importance of incorporating both spatial and temporal microbial dynamics for a comprehensive understanding of the mechanisms underlying SOC priming, especially in the context of long-term contrasting tillage practices.

Crop diversification promotes soil aggregation and carbon accumulation in global agroecosystems: A meta-analysis.

Soil aggregation contributes to the stability of soil structure and the sequestration of soil organic carbon (SOC), making it an important indicator of soil health in agroecosystems. Crop diversification is considered a rational management practice for promoting sustainable agriculture. However, the complexity of cropping systems and crop species across different regions limits our comprehensive understanding of soil aggregation and associated carbon (C) content under crop diversification. Therefore, we conducted a meta-analysis by integrating 1924 observations from three diversification strategies (cover crops, crop rotation, and intercropping) in global agroecosystems to explore the effects of crop diversification on soil aggregates and associated C content. The results showed that compared to monoculture, crop diversification significantly increased the mean weight diameter and bulk soil C by 7.5% and 3.3%, respectively. Furthermore, there was a significant increase in the proportion of macroaggregates and their associated C content by 5.0% and 12.5%, while there was a significant decrease in the proportion of microaggregates as well as silt-clay fractions along with their associated C under crop diversification. Through further analysis, we identified several important factors that influence changes in soil aggregation and C content induced by crop diversification including climatic conditions, soil properties, crop species, and agronomic practices at the experimental sites. Interestingly, no significant differences were found among the three cropping systems (cover crops, crop rotation, and intercropping), while the effects induced by crop diversifications showed relatively consistent results for monoculture crops as well as additive crops and crop diversity. Moreover, the impact of crop diversification on soil aggregates and associated C content is influenced by soil properties such as pH and SOC. In general, our findings demonstrate that crop diversification promotes soil aggregation and enhances SOC levels in agroecosystems worldwide.

Soil microbial community parameters affected by microplastics and other plastic residues.

Introduction: The impact of plastics on terrestrial ecosystems is receiving increasing attention. Although of great importance to soil biogeochemical processes, how plastics influence soil microbes have yet to be systematically studied. The primary objectives of this study are to evaluate whether plastics lead to divergent responses of soil microbial community parameters, and explore the potential driving factors. Methods: We performed a meta-analysis of 710 paired observations from 48 published articles to quantify the impact of plastic on the diversity, biomass, and functionality of soil microbial communities. Results and discussion: This study indicated that plastics accelerated soil organic carbon loss (effect size = -0.05, p = 0.004) and increased microbial functionality (effect size = 0.04, p = 0.003), but also reduced microbial biomass (effect size = -0.07, p < 0.001) and the stability of co-occurrence networks. Polyethylene significantly reduced microbial richness (effect size = -0.07, p < 0.001) while polypropylene significantly increased it (effect size = 0.17, p < 0.001). Degradable plastics always had an insignificant effect on the microbial community. The effect of the plastic amount on microbial functionality followed the "hormetic dose-response" model, the infection point was about 40 g/kg. Approximately 3564.78 µm was the size of the plastic at which the response of microbial functionality changed from positive to negative. Changes in soil pH, soil organic carbon, and total nitrogen were significantly positively correlated with soil microbial functionality, biomass, and richness (R2 = 0.04-0.73, p < 0.05). The changes in microbial diversity were decoupled from microbial community structure and functionality. We emphasize the negative impacts of plastics on soil microbial communities such as microbial abundance, essential to reducing the risk of ecological surprise in terrestrial ecosystems. Our comprehensive assessment of plastics on soil microbial community parameters deepens the understanding of environmental impacts and ecological risks from this emerging pollution.

Metagenomics reveals the abundance and accumulation trend of antibiotic resistance gene profile under long-term no tillage in a rainfed agroecosystem.

Widespread soil resistance can seriously endanger sustainable food production and soil health. Conservation tillage is a promising practice for improving soil structure and health. However, the impact of long-term no-tillage on the presence of antibiotic resistance genes in agricultural soils remains unexplored. Based on the long-term (>11 yr) tillage experimental fields that include both conservation tillage practices [no tillage (ZT)] and conventional tillage practices [plough tillage (PT)], we investigated the accumulation trend of antibiotic resistance genes (ARGs) in farmland soils under long-term no-tillage conditions. We aimed to provide a scientific basis for formulating agricultural production strategies to promote ecological environment safety and human health. In comparison to PT, ZT led to a considerable reduction in the relative abundance of both antibiotic resistance genes and antibiotic target gene families in the soil. Furthermore, the abundance of all ARGs were considerably lower in the ZT soil. The classification of drug resistance showed that ZT substantially decreased the relative abundance of Ethambutol (59.97%), ß-lactams (44.87%), Fosfomycin (35.82%), Sulfonamides (34.64%), Polymyxins (33.67%), MLSB (32.78%), Chloramphenicol (28.57%), Multi-drug resistance (26.22%), Efflux pump (23.46%), Aminoglycosides (16.79%), Trimethoprim (13.21%), Isoniazid (11.34%), Fluoroquinolone (6.21%) resistance genes, compared to PT soil. In addition, the abundance of the bacterial phyla Proteobacteria, Actinobacteria, Acidobacteria, and Gemmatimonadetes decreased considerably. The Mantel test indicated that long-term ZT practices substantially increased the abundance of beneficial microbial flora and inhibited the enrichment of ARGs in soil by improving soil microbial diversity, metabolic activity, increasing SOC, TN, and available Zn, and decreasing pH. Overall, long-term no-tillage practices inhibit the accumulation of antibiotic resistance genes in farmland soil, which is a promising agricultural management measure to reduce the accumulation risk of soil ARGs.

Long-term plastic mulching decreases rhizoplane soil carbon sequestration by decreasing microbial anabolism.

Ridge-furrow with plastic mulching (RFPM) is a widely used agricultural practice in rain-fed farmlands. However, the impact of microbial related metabolism on soil organic carbon (SOC) is not fully understood. Amino sugar analysis, high-throughput sequencing, and high-throughput qPCR approaches are combined to investigate this topic, based on a long-term experiment. Treatments include flat planting without mulching (FP), ridge-furrow without mulching (RF), and RFPM. RFPM significantly decreases rhizoplane SOC contents, while bulk SOC contents change insignificantly across treatments. In terms of microbial metabolic pathways, RFPM decreases indicators of the in vivo metabolic pathway, whereas those of the ex vivo pathway are increased. In terms of microbial community features, core taxa module #1 is dominated by Sphingomonadaceae. These are putative high yield (Y) strategists, according to the microbial life-history strategy framework. They are closely related to the in vivo pathway and are most predictive for SOC; their abundance is highest under FP and lowest under RFPM. Core taxa module #2 is dominated by Chitinophagaceae, putative resource acquisition (A) strategists, that are closely related to the ex vivo pathway. Their abundance in the rhizoplane is highest under RFPM and lowest under FP. The RFPM-induced decline in SOC occurs simultaneously with the abundance of A-strategists with in vivo pathway but not the Y-strategists with ex vivo pathway. Overall, the result of this study shows a trade-off. In RFPM practice, the ex vivo microbial pathway is enhanced along with the abundance of A-strategists. This is not the case for the in vivo pathway and associated abundance of Y-strategists, which are closely associated with SOC. Our findings underlined the impact of rhizoplane microbial metabolic pathways on SOC status is key to agricultural practices in drylands such as RFPM, and advanced our understanding of how microbes affect the carbon cycling in dryland farming.

Global pattern of soil priming effect intensity and its environmental drivers.

The microbial priming effect-the decomposition of soil organic carbon (SOC) induced by plant inputs-has long been considered an important driver of SOC dynamics, yet we have limited understanding about the direction, intensity, and drivers of priming across ecosystem types and biomes. This gap hinders our ability to predict how shifts in litter inputs under global change can affect climate feedbacks. Here, we synthesized 18,919 observations of CO2 effluxes in 802 soils across the globe to test the relative effects (i.e., log response ratio [RR]) of litter additions on native SOC decomposition and identified the dominant environmental drivers in natural ecosystems and agricultural lands. Globally, litter additions enhanced native SOC decomposition (RR = 0.35, 95% CI: 0.32-0.38), with greater priming effects occurring with decreasing latitude and more in agricultural soils (RR = 0.43) than in uncultivated soils (RR = 0.28). In natural ecosystems, soil pH and microbial community composition (e.g., bacteria: fungi ratio) were the best predictors of priming, with greater effects occurring in acidic, bacteria-dominated sandy soils. In contrast, the substrate properties of plant litter and soils were the most important drivers of priming in agricultural systems since soils with high C:N ratios and those receiving large inputs of low-quality litter had the highest priming effects. Collectively, our results suggest that, though different factors may control priming effects, the ubiquitous nature of priming means that alterations of litter quality and quantity owing to global changes will likely have consequences for global C cycling and climate forcing.

Effects of supplemental irrigation on winter wheat starch structure and properties under ridge-furrow tillage and flat tillage.

Supplemental irrigation (SI) is an important strategy to improve the water-use efficiency (WUE) of crops without compromising the yield. However, such strategy can influence the starch and grain quality. Hence, the effects of SI on winter wheat starch structure and functionality were studied on ridge-furrow (RF) and flat tillage (FT) treated fields. Flat irrigation was set as control. RF + SI significantly increased the grain yield throughout the study period (2016-2018). SI decreased the amylose content and the content of amylopectin chains with DP 13-24 but increased the proportions of amylopectin chains with DP 6-12 and 25-36. The starch granule relative crystallinity decreased, and more B-type granules were produced by SI treatment. SI significantly increased the resistant starch content in both raw and cooked starch systems. Flat tillage enhanced the effect of SI on granule specific surface area (SSA) and viscosity, which increased starch paste viscosity, while SI + RF showed the opposite effects. Our study demonstrates important combined effects of SI and tillage on wheat starch quality.

Different tillage practices change assembly, composition, and co-occurrence patterns of wheat rhizosphere diazotrophs.

Tillage has a considerable effect on the soil ecosystem and its services, including microbial communities. Harnessing beneficial microbes is a sustainable way to optimizing crop management and agricultural production. Although diazotrophs play a major role in global biological nitrogen fixation, the effects of tillage on diazotrophic communities in the rhizosphere are not fully understood. In the present study, we investigated the diazotrophic community in wheat rhizosphere soil under different tillage treatments in a long-term experiment, i.e., plow tillage (considered as conventional tillage), chisel plow tillage (considered as conservation tillage), and zero tillage (considered as conservation tillage). Tillage led to a divergent distribution in the rhizosphere diazotrophic community and significant changes in community structure. Tillage caused specific responses from members/modules of the rhizosphere diazotrophic community co-occurrence network, and the relative abundance of keystone taxa was higher under conservation tillage than under conventional tillage. The increased abundance of tillage-sensitive modules under conservation tillage had a broad and significant positive correlation with rhizosphere nutrient availability, whereas the opposite was true for conventional tillage. Differences in nutrients under different tillage practices may lead to different assembly processes of diazotrophs. Overall, our findings indicate that tillage significantly affects the assembly and composition of the rhizosphere diazotrophic community, emphasizing the importance of improved substrate availability for rhizosphere diazotrophic modules under conservation tillage. This knowledge could deepen our understanding of the rhizosphere functional microbial community (e.g., biological nitrogen fixation).

Gene and Metabolite Integration Analysis through Transcriptome and Metabolome Brings New Insight into Heat Stress Tolerance in Potato (Solanum tuberosum L.).

Potatoes are particularly vulnerable to elevated temperatures, with short heat stress (6 h) inducing stomatal opening and reducing membrane stability and prolonged heat stress (3-day) decreasing the photosynthetic capacity of potato leaves. The integration of transcriptomics and metabolomics methods demonstrated that 448 heat upregulated and 918 heat downregulated genes and 325 and 219 compounds in the positive and negative ionization modes, respectively, were up- or downregulated in leaves in response to short and prolonged heat stress. Differentially expressed genes enriched in photosynthesis, cell wall degradation, heat response, RNA processing, and protein degradation were highly induced during heat exposure, and differentially expressed metabolites involved in amino acid biosynthesis and secondary metabolism were mostly induced during heat exposure, suggesting a possible role of these genes and metabolites in the heat tolerance of the potato. Metabolite and transcript abundances for the upregulation of flavone and flavonol biosynthesis under prolonged heat stress were closely correlated. Heat-induced gene expression in Arabidopsis thaliana shoots and potato leaves overlapped, and heat stress-responsive genes overlapped with drought stress-related genes in potato. The transient expression of four heat-induced genes in Nicotiana benthamiana exhibited increased heat tolerance. This study provides a new transcriptome and metabolic profile of the potato's response to heat.

Response of soil fungal communities to continuous cropping of flue-cured tobacco.

Fungal communities are considered to be critically important for crop health and soil fertility. However, our knowledge of the response of fungal community structure to the continuous cropping of flue-cured tobacco is limited, and the interaction of soil fungal communities under different cropping systems remains unclear. In this study, we comparatively investigated the fungal abundance, diversity, and community composition in the soils in which continuous cropping of flue-cured tobacco for 3 years (3ys), 5 years (5ys), and cropping for 1 year (CK) using quantitative polymerase chain reaction and high-throughput sequencing technology. The results revealed that continuous cropping of flue-cured tobacco changed the abundance of soil fungi, and caused a significant variation in fungal diversity. In particular, continuous cropping increased the relative abundance of Mortierellales, which can dissolve mineral phosphorus in soil. Unfortunately, continuous cropping also increased the risk of potential pathogens. Moreover, long-term continuous cropping had more complex and stabilize network. This study also indicated that available potassium and available phosphorous were the primary soil factors shifting the fungal community structure. These results suggested that several soil variables may affect fungal community structure. The continuous cropping of flue-cured tobacco significantly increased the abundance and diversity of soil fungal communities.

Conservation tillage decreases selection pressure on community assembly in the rhizosphere of arbuscular mycorrhizal fungi.

Different tillage practices elicit various degrees of soil disturbance and significantly affect the community structure of soil microbes, especially rhizosphere microbes. However, little is known about the effects of tillage on community assembly and composition in the rhizosphere of arbuscular mycorrhizal fungi (RAMF). In this study, we investigated wheat RAMF communities under long-term different tillage patterns in an agroecosystem. The results showed that soil disturbance caused by tillage resulted in significant changes in RAMF communities, and this change varied with the degree of disturbance. Soil total nitrogen was the most relevant abiotic factor to RAMF communities. Notably, as a biotic selection factor, we found that cohesion of communities could also explain the changes in RAMF taxonomic and phylogenetic composition, which have not been revealed by other studies. Meanwhile, by analyzing the RAMF community assembly process under tillage practices, we found that stochastic processes dominated the assembly of RAMF communities under different tillage practices, and with the reduction of disturbance degree, the process occupied an increasingly important position. Overall, the structure and assembly process of the RAMF community in the rhizosphere varied with the degree of soil disturbance caused by tillage. These findings may provide more insights on underground processes and aid in the development of conservation tillage as a sustainable agricultural practice.

Spermidine Increases the Sucrose Content in Inferior Grain of Wheat and Thereby Promotes Its Grain Filling.

The improvement of grain filling is the key issue for promoting wheat thousand grain weight and grain yield. The levels of polyamines (PAs) significantly affect grain filling in cereals, but the mechanism by which PAs affect grain filling in wheat is unclear. In the present study, six wheat cultivars whose grain filling differed were used, and their grain-filling characteristics and endogenous PA contents were measured. In addition, exogenous PAs were supplied during the wheat grain-filling period. The grain-filling characteristics, hormone levels, starch contents, and gene expression [based on RNA sequencing (RNA-seq)] in the grain were analyzed. The objective of the present study was to investigate the effects of PAs on grain filling in wheat. The results suggested that the direct synthetic pathway from putrescine (Put) to spermidine (Spd) in the grain was a key factor in promoting grain filling and thousand grain weight in wheat. Spd through regulates the grain-filling rate of inferior grain during the early grain-filling period to affecting the grain filling and thousand grain weight of wheat. The promotive effect of Spd on the grain filling of inferior wheat grain was notably related to carbohydrate metabolism in that grain. Spd significantly increased the zeatin (Z) + zeatin riboside (ZR) contents but reduced the ethylene (ETH) evolution rate in the inferior grain. In addition, Spd significantly increased the sucrose synthase (SS) and acid invertase (AI) activities in the inferior grain. These effects of Spd led to increased sucrose content in the inferior grain. These reasons might explain why Spd significantly promoted the filling and weight of inferior wheat grain.

Greenhouse gas mitigation potential of balanced fertilization cropland under double-cropping systems: a case study in Shaanxi province, China.

Reducing agricultural greenhouse gas (GHG) emissions is attracting increasing attention. Balanced fertilization (BF) of cropland has been widely promoted and applied and has great potential to reduce GHG emissions. This study assesses GHG mitigation of BF cropland systems including winter wheat and summer maize double-cropping system (wheat-maize) and winter oilseed rape (Brassica napus) and rice double-cropping system (rape-rice) in Shaanxi province, China. We determined the boundaries, scenarios, leakage, and sources of GHG mitigation and developed a measurement system for GHG mitigation under these cropping systems for BF farmland. In the measurement system, except for the changes in nitrogen fertilizer rates, soil carbon storage, mechanical fuel consumption, and fertilizer management mode (paddy), change in crop yield was recommended as a primary source of GHG mitigation. The BF cropland areas of wheat-maize and rape-rice were 2818.89 ha and 1671.73 ha, respectively. The use of BF reduced the GHG emissions of wheat-maize by 1.15 tCO2 equivalent (CO2e) ha-1 per year and the emissions of rape-rice by 1.05 tCO2e ha-1 per year. The BF cropland produced 5007.6 tCO2e per year. Our results do not only provide a reference for the assessment of GHG mitigation on BF cropland under double-cropping systems, but also will be helpful for improving the methodology of GHG mitigation on BF cropland.

Effect of Tillage Treatment on the Diversity of Soil Arbuscular Mycorrhizal Fungal and Soil Aggregate-Associated Carbon Content.

No-tillage agriculture can sustain productivity and protect the environment. A comprehensive understanding of soil arbuscular mycorrhizal (AM) fungal diversity and soil carbon distribution within aggregate fractions is essential to the evaluation of no-tillage agriculture. The long-term field experiment included two tillage treatments (1) no tillage with straw returned to the soil (NTS), and (2) conventional mouldboard-plowing tillage without straw (CT), and was conducted on the Loess Plateau, north-western China, from October 2009. The soil samples were collected from the surface layer (0-20 cm depth) at the maturation stage of the summer maize (Zea mays L.) for analyzing aggregates separated by the dry-sieving method. The organic carbon content in the bulk soil and different particle size aggregates were measured using the dichromate oxidization method. The species compositions of soil AM fungi were compared by applying high-throughput sequencing of 18S rRNA. The results showed that the NTS had 9.1-12.2% higher percentage of soil macro-aggregates, resulting in 9.8% increase in mean weight diameter and 10.0% increase in bulk soil organic carbon content as compared with CT treatment. In addition, the NTS treatment had significantly higher percentages of Septoglomus and Glomus than the CT treatment. We also found some significant differences in the fungal communities of the soils of the two treatments. There was a strong positive relationship between bulk soil organic carbon and the percentages of Septoglomus and Glomus. Our results suggested that the NTS treatment had a protective effect on AM fungal community structures, which might play a key role in the development of agricultural sustainability in the Loess Plateau of China.

Conservation tillage increases carbon sequestration of winter wheat-summer maize farmland on Loess Plateau in China.

The idea of mitigating anthropogenic CO2 emissions by increasing soil organic carbon (SOC) is notable. However, the estimation of the net ecosystem carbon balance after conversion from conventional tillage to conservational tillage has been poorly quantified for the Loess Plateau in China. A 2-year field experiment was conducted to estimate the agroecosystem carbon balance of a winter wheat-summer maize rotation system using a full carbon cycle analysis. The results showed that a positive net ecosystem carbon balance value in the cases of rotary tillage with straw incorporation, chisel plow tillage with straw incorporation, and no tillage with straw mulching treatments. Note that a negative value was detected for the conventional moldboard plowing tillage without crop straw treatment. The conversion from conventional tillage to conservational tillage substantially enhanced the carbon sink potential from 0.84 t C ha-1 yr-1 to 2.69 t C ha-1 yr-1 in both years. Our findings suggest that the expansion of conservational tillage could enhance the potential carbon sink of the rain-fed land in China.

Changes in Rice Grain Quality of Indica and Japonica Type Varieties Released in China from 2000 to 2014.

China is the first country to use heterosis successfully for commercial rice production. This study compared the main quality characteristics (head rice rate, chalky rice rate, chalkiness degree, gel consistency, amylose content, and length-to-width ratio) of 635 rice varieties (not including upland and glutinous rice) released from 2000 to 2014 to establish the quality status and offer suggestions for future rice breeding for grain quality in China. In the past 15 years, grain quality in japonica rice and indica hybrid rice has improved. In japonica rice, inbred varieties have increased head rice rates and decreased chalkiness degree over time, while hybrid rice varieties have decreased chalky rice rates and chalkiness degree. In indica hybrid rice, the chalkiness degree and amylose contents have decreased and gel consistency has increased. Improvements in grain quality in indica inbred rice have been limited, with some increases in head rice rate and decreases in chalky rice rate and amylose content. From 2010 to 2014, the percentage of indica varieties meeting the Grade III national standard of rice quality for different quality traits was low, especially for chalky rice rate and chalkiness degree. Japonica varieties have more superior grain quality than indica rice in terms of higher head rice rates and gel consistency, lower chalky rice rates and chalkiness degree, and lower amylose contents, which may explain why the Chinese prefer japonica rice. The japonica rice varieties, both hybrid and inbred, had similar grain qualities, but this varied in indica rice with the hybrid varieties having higher grain quality than inbred varieties due to significantly better head rice rates and lower chalkiness degree. For better quality rice in future, the chalky rice rate and chalkiness degree should be improved in japonica rice along with most of the quality traits in indica rice.

Optimum ridge-to-furrow ratio in ridge-furrow mulching systems for improving water conservation in maize (Zea may L.) production.

Water-saving cultivation techniques have been attracting increased attention worldwide. Ridge-furrow mulching system (RFMS), as a prospective rainwater harvesting system, has been widely adopted in arid and semi-arid areas. Field experiments were conducted in 2014 and 2015 to compare soil water storage, soil temperature, maize yield, and water use efficiency (WUE) among different ridge/furrow width arrangements in RFMS comprised of three different ridge/furrow ratios, i.e., 40:70 cm (RFMS40), 55:55 cm (RFMS55), and 70:40 cm (RFMS70) and conventional flat planting (CK, without mulching). All these four planting patterns had the same planting density. The RFMS technique not only increased soil temperature of the ridge but also improved soil moisture of the furrow when compared with CK. These positive effects were intensified with increasing ridge/furrow ratio in RFMS. This improvement in RFMS resulted in more stable and earlier seedling establishment. Maize yields were increased by 26.1, 36.4, and 50.3% under RFMS40, RFMS55, and RFMS70 treatments, respectively, when compared with CK across both years. RFMS did not decrease the evapotranspiration significantly, compared with CK. Eventually, WUE were enhanced by 25.7, 38.7, and 53.9% in RFMS40, RFMS55, and RFMS70, respectively, compared with CK. Taken together, our results suggest that increasing ratio of ridge to furrow in the case of RFMS70, can be recommended as high-yielding cultivation pattern for promoting precipitation use efficiency in the rain-fed semi-arid areas.

Fungal Communities in Rhizosphere Soil under Conservation Tillage Shift in Response to Plant Growth.

Conservation tillage is an extensively used agricultural practice in northern China that alters soil texture and nutrient conditions, causing changes in the soil microbial community. However, how conservation tillage affects rhizosphere and bulk soil fungal communities during plant growth remains unclear. The present study investigated the effect of long-term (6 years) conservation (chisel plow, zero) and conventional (plow) tillage during wheat growth on the rhizosphere fungal community, using high-throughput sequencing of the internal transcribed spacer (ITS) gene and quantitative PCR. During tillering, fungal alpha diversity in both rhizosphere and bulk soil were significantly higher under zero tillage compared to other methods. Although tillage had no significant effect during the flowering stage, fungal alpha diversity at this stage was significantly different between rhizosphere and bulk soils, with bulk soil presenting the highest diversity. This was also reflected in the phylogenetic structure of the communities, as rhizosphere soil communities underwent a greater shift from tillering to flowering compared to bulk soil communities. In general, less variation in community structure was observed under zero tillage compared to plow and chisel plow treatments. Changes in the relative abundance of the fungal orders Capnodiales, Pleosporales, and Xylariales contributed the highest to the dissimilarities observed. Structural equation models revealed that the soil fungal communities under the three tillage regimes were likely influenced by the changes in soil properties associated with plant growth. This study suggested that: (1) differences in nutrient resources between rhizosphere and bulk soils can select for different types of fungi thereby increasing community variation during plant growth; (2) tillage can alter fungal communities' variability, with zero tillage promoting more stable communities. This work suggests that long-term changes in tillage regimes may result in unique soil fungal ecology, which might influence other aspects of soil functioning (e.g., decomposition).

MYB89 Transcription Factor Represses Seed Oil Accumulation.

In many higher plants, seed oil accumulation is precisely controlled by intricate multilevel regulatory networks, among which transcriptional regulation mainly influences oil biosynthesis. In Arabidopsis (Arabidopsis thaliana), the master positive transcription factors, WRINKLED1 (WRI1) and LEAFY COTYLEDON1-LIKE (L1L), are important for seed oil accumulation. We found that an R2R3-MYB transcription factor, MYB89, was expressed predominantly in developing seeds during maturation. Oil and major fatty acid biosynthesis in seeds was significantly promoted by myb89-1 mutation and MYB89 knockdown; thus, MYB89 was an important repressor during seed oil accumulation. RNA sequencing revealed remarkable up-regulation of numerous genes involved in seed oil accumulation in myb89 seeds at 12 d after pollination. Posttranslational activation of a MYB89-glucocorticoid receptor fusion protein and chromatin immunoprecipitation assays demonstrated that MYB89 inhibited seed oil accumulation by directly repressing WRI1 and five key genes and by indirectly suppressing L1L and 11 key genes involved in oil biosynthesis during seed maturation. These results help us to understand the novel function of MYB89 and provide new insights into the regulatory network of transcriptional factors controlling seed oil accumulation in Arabidopsis.