Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 46
Filtrar
Más filtros












Base de datos
Intervalo de año de publicación
1.
Ecol Evol ; 13(10): e10573, 2023 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-37780082

RESUMEN

We examine the population genetic structure and divergence among the regional populations of the Japanese honeybee, Apis cerana japonica, by re-sequencing the genomes of 105 individuals from the three main Japanese islands with diverse climates. The genetic structure results indicated that these individuals are distinct from the mainland Chinese A. cerana samples. Furthermore, population structure analyses have identified three genetically distinct geographic regions in Japan: Northern (Tohoku-Kanto-Chubu districts), Central (Chugoku district), and Southern (Kyushu district). In some districts, "possible non-native" individuals, likely introduced from other regions in recent years, were discovered. Then, genome-wide scans were conducted to detect candidate genes for adaptation by two different approaches. We performed a population branch statistics (PBS) analysis to identify candidate genes for population-specific divergence. A latent factor mixed model (LFMM) was used to identify genes associated with climatic variables along a geographic gradient. The PBSmax analysis identified 25 candidate genes for population-specific divergence whereas the LFMM analysis identified 73 candidate genes for adaptation to climatic variables along a geographic gradient. However, no common genes were identified by both methods.

2.
Plant Cell Physiol ; 64(2): 234-247, 2023 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-36440710

RESUMEN

The glucosinolate-myrosinase defense system (GMDS), characteristic of Brassicales, is involved in plant defense. Previous single-cell transcriptomic analyses have reported the expression profiles of multiple GMDS-related cell types (i.e. myrosinase-rich myrosin idioblasts and multiple types of potential glucosinolate synthetic cells as well as a candidate S-cell for glucosinolate accumulation). However, differences in plant stages and cell-type annotation methods have hindered comparisons among studies. Here, we used the single-cell transcriptome profiles of extended Arabidopsis leaves and verified the distribution of previously used markers to refine the expression profiles of GMDS-associated cell types. Moreover, we performed beta-glucuronidase promoter assays to confirm the histological expression patterns of newly obtained markers for GMDS-associated candidates. As a result, we found a set of new specific reporters for myrosin cells and potential glucosinolate-producing cells.


Asunto(s)
Arabidopsis , Arabidopsis/genética , Glucosinolatos/metabolismo , Hojas de la Planta/metabolismo , Glicósido Hidrolasas/metabolismo , Glucuronidasa/metabolismo , Plantas/metabolismo , Análisis de Secuencia de ARN
3.
PLoS One ; 17(12): e0278762, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36459529

RESUMEN

With the rapid development of the international community, foreign language learning has become increasingly important. Listening training is a particularly important component of foreign language learning. The most difficult aspect of listening training is the development of speech discrimination ability, which is crucial to speech perception. General behavioral training requires a substantial amount of time and attention. To address this, we previously developed a neurofeedback (NF) training system that enables unconscious learning of auditory discrimination. However, to our knowledge, no studies have compared NF training and general behavioral training. In the present study, we compared the learning effects of NF training, general behavioral training, and a combination of both strategies. Specifically, we developed a gamified and adapted NF training of auditory discrimination. We found that both NF training and general behavioral training enhanced behavioral performance, whereas only NF training elicited significant changes in brain activity. Furthermore, the participants that used both training methods exhibited the largest improvement in behavioral performance. This indicates that the combined use of NF and general behavioral training methods may be optimal for enhancing auditory discrimination ability when learning foreign languages.


Asunto(s)
Neurorretroalimentación , Percepción del Habla , Humanos , Aprendizaje , Percepción Auditiva , Discriminación en Psicología
4.
Mycorrhiza ; 32(5-6): 373-385, 2022 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-35767052

RESUMEN

Some arbuscular mycorrhizal (AM) fungal species known to form sporocarps (i.e., aggregations of spores) are polyphyletic in two orders, Glomerales and Diversisporales. Spore clusters (sporocarp-like structures) often formed in pot cultures or in vitro conditions are supposed to be clonal populations, while sporocarps in natural habitats with a fungal peridium are morphologically similar to those of epigeous sexual (zygosporic) sporocarps of Endogone species. Thus, in this study, we explored the genetics of sporocarpic spores of two AM fungi with a view to possibilities of clonal or sexual reproduction during sporocarps formation. To examine these possibilities, we investigated single-nucleotide polymorphisms (SNPs) in reduced genomic libraries of spores isolated from sporocarps molecularly identified as Rhizophagus irregularis and Diversispora epigaea. In addition, partial sequences of the MAT locus HD2 gene of R. irregularis were phylogenetically analyzed to determine the nuclear status of the spores. We found that most SNPs were shared among the spores isolated from each sporocarp in both species. Furthermore, all HD2 sequences from spores isolated from three R. irregularis sporocarps were identical. These results indicate that those sporocarps comprise clonal spores. Therefore, sporocarps with clonal spores may have different functions than sexual reproduction, such as massive spore production or spore dispersal via mycophagy.


Asunto(s)
Glomeromycota , Micorrizas , Ecosistema , Hongos , Glomeromycota/genética , Micorrizas/genética , Esporas Fúngicas/genética
5.
Commun Biol ; 5(1): 43, 2022 01 12.
Artículo en Inglés | MEDLINE | ID: mdl-35022540

RESUMEN

Arbuscular mycorrhizal (AM) symbiosis is a mutually beneficial interaction between fungi and land plants and promotes global phosphate cycling in terrestrial ecosystems. AM fungi are recognised as obligate symbionts that require root colonisation to complete a life cycle involving the production of propagules, asexual spores. Recently, it has been shown that Rhizophagus irregularis can produce infection-competent secondary spores asymbiotically by adding a fatty acid, palmitoleic acid. Furthermore, asymbiotic growth can be supported using myristate as a carbon and energy source for their asymbiotic growth to increase fungal biomass. However, the spore production and the ability of these spores to colonise host roots were still limited compared to the co-culture of the fungus with plant roots. Here we show that a combination of two plant hormones, strigolactone and jasmonate, induces the production of a large number of infection-competent spores in asymbiotic cultures of Rhizophagus clarus HR1 in the presence of myristate and organic nitrogen. Inoculation of asymbiotically-generated spores promoted the growth of host plants, as observed for spores produced by symbiotic culture system. Our findings provide a foundation for the elucidation of hormonal control of the fungal life cycle and the development of inoculum production schemes.


Asunto(s)
Ciclopentanos/administración & dosificación , Hongos/fisiología , Compuestos Heterocíclicos con 3 Anillos/administración & dosificación , Lactonas/administración & dosificación , Micorrizas/fisiología , Ácido Mirístico/metabolismo , Nitrógeno/metabolismo , Oxilipinas/administración & dosificación , Reguladores del Crecimiento de las Plantas , Simbiosis
6.
Ecotoxicology ; 31(2): 251-258, 2022 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-34981242

RESUMEN

The European honey bee, Apis mellifera, is the most common and important pollinator of crops worldwide. Honey bees are damaged by destructive parasitic mites, but they also have evolved a behavioral immune system to remove them. Exposures to neonicotinoids, however, can cause significant behavioral effects because these compounds alter the central role of nicotinic acetylcholine receptor in insect brains. In this study, we assessed the effects of three neonicotinoids that have a high toxicity to bees-imidacloprid, thiamethoxam, and clothianidin-on the behavioral immune system of honey bees. We used A. mellifera and the endoparasitic mite Acarapis woodi as a behavioral immune system model because A. mellifera can effectively remove the mite by autogrooming. Our results did not demonstrate an effect of neonicotinoid application on whether bees show autogrooming or on mite removal, but the time to initial autogrooming became shorter and the number of autogrooming attempts increased. As opposed to previous studies, our findings indicate that the honey bee response to parasitic mites becomes more sensitive after exposure to neonicotinoids.Clinical Trials Registration: Not applicable.


Asunto(s)
Insecticidas , Ácaros , Animales , Abejas , Productos Agrícolas , Insecticidas/toxicidad , Ácaros/fisiología , Neonicotinoides/toxicidad , Tiametoxam
7.
Front Plant Sci ; 13: 995589, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36733592

RESUMEN

Legumes develop root nodules in association with compatible rhizobia to overcome nitrogen deficiency. Rhizobia enter the host legume, mainly through infection threads, and induce nodule primordium formation in the root cortex. Multiple transcription factors have been identified to be involved in the regulation of the establishment of root nodule symbiosis, including ERF Required for Nodulation1 (ERN1). ERN1 is involved in a transcription network with CYCLOPS and NODULE INCEPTION (NIN). Mutation of ERN1 often results in misshapen root hair tips, deficient infection thread formation, and immature root nodules. ERN1 directly activates the expression of ENOD11 in Medicago truncatula to assist cell wall remodeling and Epr3 in Lotus japonicus to distinguish rhizobial exopolysaccharide signals. However, aside from these two genes, it remains unclear which genes are regulated by LjERN1 or what role LjERN1 plays during root nodule symbiosis. Thus, we conducted RNA sequencing to compare the gene expression profiles of wild-type L. japonicus and Ljern1-6 mutants. In total, 234 differentially expressed genes were identified as candidate LjERN1 target genes. These genes were found to be associated with cell wall remodeling, signal transduction, phytohormone metabolism, and transcription regulation, suggesting that LjERN1 is involved in multiple processes during the early stages of the establishment of root nodule symbiosis. Many of these candidate genes including RINRK1 showed decreased expression levels in Ljnin-2 mutants based on a search of a public database, suggesting that LjERN1 and LjNIN coordinately regulate gene expression. Our data extend the current understanding of the pleiotropic role of LjERN1 in root nodule symbiosis.

8.
PLoS One ; 16(7): e0254771, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34283873

RESUMEN

Listening is critical for foreign language learning. Listening difficulties can occur because of an inability to perceive or recognize sounds while listening to speech, whereas successful listening can boost understanding and improve speaking when learning a foreign language. Previous studies in our laboratory revealed that EEG-neurofeedback (NF) using mismatch negativity event-related brain potential successfully induced unconscious learning in terms of auditory discrimination of speech sounds. Here, we conducted a feasibility study with a small participant group (NF group and control group; six participants each) to examine the practical effects of mismatch negativity NF for improving the perception of speech sounds in a foreign language. Native Japanese speakers completed a task in which they learned to perceive and recognize spoken English words containing the consonants "l" or "r". Participants received neurofeedback training while not explicitly attending to auditory stimuli. The results revealed that NF training significantly improved the proportion of correct in discrimination and recognition trials, even though the training time for each word pair was reduced to 20% of the training time reported in our previous study. The learning effect was not affected by training with three pairs of words with different vowels. The current results indicate that NF resulted in long-term learning that persisted for at least 2 months.


Asunto(s)
Aprendizaje/fisiología , Neurorretroalimentación/métodos , Percepción del Habla/fisiología , Estimulación Acústica/métodos , Adulto , Percepción Auditiva/fisiología , Discriminación en Psicología/fisiología , Electroencefalografía/métodos , Potenciales Evocados/fisiología , Potenciales Evocados Auditivos/fisiología , Estudios de Factibilidad , Femenino , Humanos , Japón , Lenguaje , Masculino , Multilingüismo , Fonética , Habla/fisiología
9.
Elife ; 102021 04 27.
Artículo en Inglés | MEDLINE | ID: mdl-33902812

RESUMEN

Some sea slugs sequester chloroplasts from algal food in their intestinal cells and photosynthesize for months. This phenomenon, kleptoplasty, poses a question of how the chloroplast retains its activity without the algal nucleus. There have been debates on the horizontal transfer of algal genes to the animal nucleus. To settle the arguments, this study reported the genome of a kleptoplastic sea slug, Plakobranchus ocellatus, and found no evidence of photosynthetic genes encoded on the nucleus. Nevertheless, it was confirmed that light illumination prolongs the life of mollusk under starvation. These data presented a paradigm that a complex adaptive trait, as typified by photosynthesis, can be transferred between eukaryotic kingdoms by a unique organelle transmission without nuclear gene transfer. Our phylogenomic analysis showed that genes for proteolysis and immunity undergo gene expansion and are up-regulated in chloroplast-enriched tissue, suggesting that these molluskan genes are involved in the phenotype acquisition without horizontal gene transfer.


Asunto(s)
Chlorophyta/fisiología , Cloroplastos/fisiología , Gastrópodos/genética , Transferencia de Gen Horizontal , Simbiosis/genética , Animales , Núcleo Celular/genética , Núcleo Celular/fisiología , Chlorophyta/genética , Filogenia
10.
Microbes Environ ; 35(3)2020.
Artículo en Inglés | MEDLINE | ID: mdl-32727975

RESUMEN

Bradyrhizobium sp. strain SUTN9-2 is a symbiotic and endophytic diazotrophic bacterium found in legume and rice plants and has the potential to promote growth. The present results revealed that SUTN9-2 underwent cell enlargement, increased its DNA content, and efficiently performed nitrogen fixation in response to rice extract. Some factors in rice extract induced the expression of cell cycle and nitrogen fixation genes. According to differentially expressed genes (DEGs) from the transcriptomic analysis, SUTN9-2 was affected by rice extract and the deletion of the bclA gene. The up-regulated DEGs encoding a class of oxidoreductases, which act with oxygen atoms and may have a role in controlling oxygen at an appropriate level for nitrogenase activity, followed by GroESL chaperonins are required for the function of nitrogenase. These results indicate that following its exposure to rice extract, nitrogen fixation by SUTN9-2 is induced by the collective effects of GroESL and oxidoreductases. The expression of the sensitivity to antimicrobial peptides transporter (sapDF) was also up-regulated, resulting in cell differentiation, even when bclA (sapDF) was mutated. This result implies similarities in the production of defensin-like antimicrobial peptides (DEFs) by rice and nodule-specific cysteine-rich (NCR) peptides in legume plants, which affect bacterial cell differentiation.


Asunto(s)
Bradyrhizobium/citología , Bradyrhizobium/metabolismo , Fijación del Nitrógeno , Oryza/microbiología , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Bradyrhizobium/genética , Ciclo Celular/genética , Endófitos , Regulación de la Expresión Génica , Mutación , Fijación del Nitrógeno/efectos de los fármacos , Fijación del Nitrógeno/genética , Oryza/química , Oryza/crecimiento & desarrollo , Extractos Vegetales/farmacología , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Simbiosis , Transcriptoma/efectos de los fármacos
11.
Exp Appl Acarol ; 80(4): 477-490, 2020 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-32253641

RESUMEN

Acarapis woodi, a parasitic mite of honey bees, was first detected in Japan in 2010. Infestation was mostly observed in the Japanese honey bee (Apis cerana japonica) and was rare in the European honey bee (Apis mellifera). By 2014, the mites had spread throughout central and eastern Japan. In the current study, we investigated the subsequent expansion of the mite to western Japan. Our research revealed that the mites were distributed across most of Japan by 2018, except for Wakayama and Kochi prefectures. Many small remote islands more than 20 km away from mainland Japan are still free of A. woodi, but bees on some of these islands were infested. About 40% of colonies of the Japanese honey bee in Japan were infested by the mites, and average mite prevalence of the infested colonies was about 50% during the 6-year study. There was no trend of decline in the infested colony proportion or in the mite prevalence. In addition, the observation of Japanese honey bee colonies by hobby beekeepers for two signs of mite infestation, K-wing and crawling bees, was an effective means for estimating infestation by tracheal mites.


Asunto(s)
Abejas/parasitología , Infestaciones por Ácaros/veterinaria , Ácaros , Animales , Japón/epidemiología , Infestaciones por Ácaros/epidemiología , Prevalencia , Tráquea/parasitología
12.
J Chem Ecol ; 45(10): 811-817, 2019 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-31494780

RESUMEN

The flower bug Orius sauteri is a generalist predator that occurs throughout Japan, and is a promising indigenous natural enemy for micro-pests such as thrips, aphids, and spider mites. We aimed to manipulate the attraction, dispersal, and settlement behavior of Orius bugs using natural chemical substances emitted by the bugs themselves. To identify potential candidates, we screened components in the whole-body extract of O. sauteri based on antennal response and then determined their chemical structure. A gas chromatograph electroantennographic detector (GC/EAD) indicated that the antennae of males responded to two components in the extract of females. GC/mass spectrometry (MS) showed that these two components were octenal and octadienal. Derivatization or GC-FT-IR analysis identified these components as (E)-2-octenal and (E)-2,7-octadienal. To assess the effect of these components on O. sauteri behavior, we conducted two assays. A field bioassay demonstrated that a blend of the two components functioned as a sex pheromone, and a dispersal assay showed that (E)-2-octenal generated a dose-dependent dispersal response. Our study will provide baseline information for enhancing the retention of O. sauteri on important commercial crops to prey on pest species.


Asunto(s)
Heterópteros/fisiología , Atractivos Sexuales/análisis , Aldehídos/análisis , Aldehídos/aislamiento & purificación , Aldehídos/farmacología , Animales , Conducta Animal/efectos de los fármacos , Femenino , Cromatografía de Gases y Espectrometría de Masas , Heterópteros/química , Masculino , Atractivos Sexuales/aislamiento & purificación , Atractivos Sexuales/farmacología , Espectroscopía Infrarroja por Transformada de Fourier
13.
Plant Cell Physiol ; 60(10): 2272-2281, 2019 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-31241164

RESUMEN

Arbuscular mycorrhizal fungi (AMF) establish symbiotic relationships with most land plants, mainly for the purpose of nutrient exchange. Many studies have revealed the regulation of processes in AMF, such as nutrient absorption from soil, metabolism and exchange with host plants, and the genes involved. However, the spatial regulation of the genes within the structures comprising each developmental stage is not well understood. Here, we demonstrate the structure-specific transcriptome of the model AMF species, Rhizophagus irregularis. We performed an ultra-low input RNA-seq analysis, SMART-seq2, comparing five extraradical structures, germ tubes, runner hyphae, branched absorbing structures (BAS), immature spores and mature spores. In addition, we reanalyzed the recently reported RNA-seq data comparing intraradical mycelium and arbuscule. Our analyses captured the distinct features of each structure and revealed the structure-specific expression patterns of genes related to nutrient transport and metabolism. Of note, the transcriptional profiles suggest distinct functions of BAS in nutrient absorption. These findings provide a comprehensive dataset to advance our understanding of the transcriptional dynamics of fungal nutrition in this symbiotic system.


Asunto(s)
Daucus carota/microbiología , Regulación Fúngica de la Expresión Génica , Glomeromycota/genética , Micorrizas/genética , Nutrientes/metabolismo , Transcriptoma , Transporte Biológico , Perfilación de la Expresión Génica , Biblioteca de Genes , Glomeromycota/fisiología , Hifa , Micelio , Micorrizas/fisiología , Raíces de Plantas/microbiología , Análisis de Secuencia de ARN , Suelo/química , Esporas Fúngicas , Simbiosis
14.
Sci Data ; 6: 190022, 2019 02 19.
Artículo en Inglés | MEDLINE | ID: mdl-30778257

RESUMEN

Elysia chlorotica, a sacoglossan sea slug found off the East Coast of the United States, is well-known for its ability to sequester chloroplasts from its algal prey and survive by photosynthesis for up to 12 months in the absence of food supply. Here we present a draft genome assembly of E. chlorotica that was generated using a hybrid assembly strategy with Illumina short reads and PacBio long reads. The genome assembly comprised 9,989 scaffolds, with a total length of 557 Mb and a scaffold N50 of 442 kb. BUSCO assessment indicated that 93.3% of the expected metazoan genes were completely present in the genome assembly. Annotation of the E. chlorotica genome assembly identified 176 Mb (32.6%) of repetitive sequences and a total of 24,980 protein-coding genes. We anticipate that the annotated draft genome assembly of the E. chlorotica sea slug will promote the investigation of sacoglossan genetics, evolution, and particularly, the genetic signatures accounting for the long-term functioning of algal chloroplasts in an animal.


Asunto(s)
Gastrópodos/genética , Genoma , Animales , Anotación de Secuencia Molecular , Fotosíntesis
15.
PLoS One ; 13(12): e0206225, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30517107

RESUMEN

Traumatic insemination (TI) is an extraordinary style of mating behavior wherein the female integument is pierced by the male extragenital structure to transfer the spermatozoa into the female's body through wounding. Flower bugs of the genus Orius belong to the family Anthocoridae (Heteroptera), which is referred to as the "TI family". Males possess sharp shaped extragenitalia, and females receive the extragenitalia using the copulatory tubes, which are specialized extragenital structures in Orius species. Since TI is not well studied in insects possessing the copulatory tube, we examined the genital structures and copulatory processes of three species, Orius strigicollis, O. sauteri, and O. minutus. Scanning electron microscopic observations revealed the positions of male extragenital structures during copulation. A needle-like flagellum was deeply inserted into the female intersegment between the abdominal VII and VIII segments, while the curved part of a sickle-like cone forced the intersegment to expand. No scars were detected around the copulation region after copulation. The copulatory tube adhered to the interior of segment VII, and the interior integument around the copulatory tube remained intact after copulation. On the basis of these results, TI does not occur in these Orius species. A pair of seminal conceptacles, which exists in typical TI insects, was found at the base of the oviducts in O. strigicollis. The distal end of the copulatory tube connected to a closed bag with a double-membrane, termed the sperm pouch. The sperm pouch was filled with filamentous structures after copulation and structures with equivalent forms were observed in adult male testis. These structures, considered to be spermatozoa, persisted in the pouch for at least two weeks after copulation, suggesting that the pouch is a long-term spermatozoa storage organ.


Asunto(s)
Copulación/fisiología , Genitales Femeninos , Genitales Masculinos , Heterópteros , Animales , Femenino , Genitales Femeninos/fisiología , Genitales Femeninos/ultraestructura , Genitales Masculinos/fisiología , Genitales Masculinos/ultraestructura , Heterópteros/fisiología , Heterópteros/ultraestructura , Masculino
16.
Commun Biol ; 1: 87, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30271968

RESUMEN

Arbuscular mycorrhizal fungus (AMF) species are some of the most widespread symbionts of land plants. Our much improved reference genome assembly of a model AMF, Rhizophagus irregularis DAOM-181602 (total contigs = 210), facilitated a discovery of repetitive elements with unusual characteristics. R. irregularis has only ten or 11 copies of complete 45S rDNAs, whereas the general eukaryotic genome has tens to thousands of rDNA copies. R. irregularis rDNAs are highly heterogeneous and lack a tandem repeat structure. These findings provide evidence for the hypothesis that rDNA heterogeneity depends on the lack of tandem repeat structures. RNA-Seq analysis confirmed that all rDNA variants are actively transcribed. Observed rDNA/rRNA polymorphisms may modulate translation by using different ribosomes depending on biotic and abiotic interactions. The non-tandem repeat structure and intragenomic heterogeneity of AMF rDNA/rRNA may facilitate successful adaptation to various environmental conditions, increasing host compatibility of these symbiotic fungi.

17.
BMC Genomics ; 19(1): 465, 2018 Jun 18.
Artículo en Inglés | MEDLINE | ID: mdl-29914365

RESUMEN

BACKGROUND: Mycorrhizal symbiosis is one of the most fundamental types of mutualistic plant-microbe interaction. Among the many classes of mycorrhizae, the arbuscular mycorrhizae have the most general symbiotic style and the longest history. However, the genomes of arbuscular mycorrhizal (AM) fungi are not well characterized due to difficulties in cultivation and genetic analysis. In this study, we sequenced the genome of the AM fungus Rhizophagus clarus HR1, compared the sequence with the genome sequence of the model species R. irregularis, and checked for missing genes that encode enzymes in metabolic pathways related to their obligate biotrophy. RESULTS: In the genome of R. clarus, we confirmed the absence of cytosolic fatty acid synthase (FAS), whereas all mitochondrial FAS components were present. A KEGG pathway map identified the absence of genes encoding enzymes for several other metabolic pathways in the two AM fungi, including thiamine biosynthesis and the conversion of vitamin B6 derivatives. We also found that a large proportion of the genes encoding glucose-producing polysaccharide hydrolases, that are present even in ectomycorrhizal fungi, also appear to be absent in AM fungi. CONCLUSIONS: In this study, we found several new genes that are absent from the genomes of AM fungi in addition to the genes previously identified as missing. Missing genes for enzymes in primary metabolic pathways imply that AM fungi may have a higher dependency on host plants than other biotrophic fungi. These missing metabolic pathways provide a genetic basis to explore the physiological characteristics and auxotrophy of AM fungi.


Asunto(s)
Proteínas Fúngicas/genética , Regulación de la Expresión Génica de las Plantas , Genoma Fúngico , Glomeromycota/genética , Micorrizas/genética , Raíces de Plantas/microbiología , Biología Computacional , ADN de Hongos/genética , Daucus carota/microbiología , Glomeromycota/clasificación , Glomeromycota/crecimiento & desarrollo , Glomeromycota/aislamiento & purificación , Secuenciación de Nucleótidos de Alto Rendimiento , Análisis de Secuencia de ADN , Simbiosis
18.
mBio ; 9(3)2018 06 12.
Artículo en Inglés | MEDLINE | ID: mdl-29895637

RESUMEN

Members of the genus Rickettsiella are bacterial pathogens of insects and other arthropods. Recently, a novel facultative endosymbiont, "Candidatus Rickettsiella viridis," was described in the pea aphid Acyrthosiphon pisum, whose infection causes a striking host phenotype: red and green genetic color morphs exist in aphid populations, and upon infection with the symbiont, red aphids become green due to increased production of green polycyclic quinone pigments. Here we determined the complete genome sequence of the symbiont. The 1.6-Mb circular genome, harboring some 1,400 protein-coding genes, was similar to the genome of entomopathogenic Rickettsiella grylli (1.6 Mb) but was smaller than the genomes of phylogenetically allied human pathogens Coxiella burnetii (2.0 Mb) and Legionella pneumophila (3.4 Mb). The symbiont's metabolic pathways exhibited little complementarity to those of the coexisting primary symbiont Buchnera aphidicola, reflecting the facultative nature of the symbiont. The symbiont genome harbored neither polyketide synthase genes nor the evolutionarily allied fatty acid synthase genes that are suspected to catalyze the polycyclic quinone synthesis, indicating that the green pigments are produced not by the symbiont but by the host aphid. The symbiont genome retained many type IV secretion system genes and presumable effector protein genes, whose homologues in L. pneumophila were reported to modulate a variety of the host's cellular processes for facilitating infection and virulence. These results suggest the possibility that the symbiont is involved in the green pigment production by affecting the host's metabolism using the secretion machineries for delivering the effector molecules into the host cells.IMPORTANCE Insect body color is relevant to a variety of biological aspects such as species recognition, sexual selection, mimicry, aposematism, and crypsis. Hence, the bacterial endosymbiont "Candidatus Rickettsiella viridis," which alters aphid body color from red to green, is of ecological interest, given that different predators preferentially exploit either red- or green-colored aphids. Here we determined the complete 1.6-Mb genome of the symbiont and uncovered that, although the red-green color transition was ascribed to upregulated production of green polycyclic quinone pigments, the symbiont genome harbored few genes involved in the polycyclic quinone biosynthesis. Meanwhile, the symbiont genome contained type IV secretion system genes and presumable effector protein genes, whose homologues modulate eukaryotic cellular processes for facilitating infection and virulence in the pathogen Legionella pneumophila We propose the hypothesis that the symbiont may upregulate the host's production of polycyclic quinone pigments via cooption of secretion machineries and effector molecules for pathogenicity.


Asunto(s)
Áfidos/química , Áfidos/microbiología , Coxiellaceae/aislamiento & purificación , Simbiosis , Animales , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Color , Coxiellaceae/clasificación , Coxiellaceae/genética , Coxiellaceae/fisiología , Genoma Bacteriano , Genómica , Filogenia
19.
Front Psychol ; 8: 2112, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-29259570

RESUMEN

Galvanic tongue stimulation (GTS) modulates taste sensation. However, the effect of GTS is contingent on the electrode polarity in the proximity of the tongue. If an anodal electrode is attached in the proximity of the tongue, an electrical or metallic taste is elicited. On the other hand, if only cathodal electrode is attached in the proximity of the tongue, the salty taste, which is induced by electrolyte materials, is inhibited. The mechanism of this taste inhibition is not adequately understood. In this study, we aim to demonstrate that the inhibition is cause by ions, which elicit taste and which migrate from the taste sensors on the tongue by GTS. We verified the inhibitory effect of GTS on all five basic tastes induced by electrolyte materials. This technology is effective for virtual reality systems and interfaces to support dietary restrictions. Our findings demonstrate that cathodal-GTS inhibits all the five basic tastes. The results also support our hypothesis that the effects of cathodal-GTS are caused by migrating tasting ions in the mouth.

20.
Proc Natl Acad Sci U S A ; 114(40): E8382-E8391, 2017 10 03.
Artículo en Inglés | MEDLINE | ID: mdl-28923972

RESUMEN

Beetles, representing the majority of the insect species diversity, are characterized by thick and hard cuticle, which plays important roles for their environmental adaptation and underpins their inordinate diversity and prosperity. Here, we report a bacterial endosymbiont extremely specialized for sustaining beetle's cuticle formation. Many weevils are associated with a γ-proteobacterial endosymbiont lineage Nardonella, whose evolutionary origin is estimated as older than 100 million years, but its functional aspect has been elusive. Sequencing of Nardonella genomes from diverse weevils unveiled drastic size reduction to 0.2 Mb, in which minimal complete gene sets for bacterial replication, transcription, and translation were present but almost all of the other metabolic pathway genes were missing. Notably, the only metabolic pathway retained in the Nardonella genomes was the tyrosine synthesis pathway, identifying tyrosine provisioning as Nardonella's sole biological role. Weevils are armored with hard cuticle, tyrosine is the principal precursor for cuticle formation, and experimental suppression of Nardonella resulted in emergence of reddish and soft weevils with low tyrosine titer, confirming the importance of Nardonella-mediated tyrosine production for host's cuticle formation and hardening. Notably, Nardonella's tyrosine synthesis pathway was incomplete, lacking the final step transaminase gene. RNA sequencing identified host's aminotransferase genes up-regulated in the bacteriome. RNA interference targeting the aminotransferase genes induced reddish and soft weevils with low tyrosine titer, verifying host's final step regulation of the tyrosine synthesis pathway. Our finding highlights an impressively intimate and focused aspect of the host-symbiont metabolic integrity via streamlined evolution for a single biological function of ecological relevance.


Asunto(s)
Bacterias/patogenicidad , Genoma Bacteriano , Integumento Común/fisiología , Simbiosis , Transaminasas/metabolismo , Tirosina/metabolismo , Gorgojos/genética , Animales , Fenómenos Fisiológicos Bacterianos , Evolución Molecular , Perfilación de la Expresión Génica , Secuenciación de Nucleótidos de Alto Rendimiento , Interacciones Huésped-Patógeno , Gorgojos/microbiología
SELECCIÓN DE REFERENCIAS
DETALLE DE LA BÚSQUEDA
...