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1.
Int J Mol Sci ; 25(12)2024 Jun 18.
Artículo en Inglés | MEDLINE | ID: mdl-38928403

RESUMEN

Despite the recognized potential of nanoparticles, only a few formulations have progressed to clinical trials, and an even smaller number have been approved by the regulatory authorities and marketed. Virus-like particles (VLPs) have emerged as promising alternatives to conventional nanoparticles due to their safety, biocompatibility, immunogenicity, structural stability, scalability, and versatility. Furthermore, VLPs can be surface-functionalized with small molecules to improve circulation half-life and target specificity. Through the functionalization and coating of VLPs, it is possible to optimize the response properties to a given stimulus, such as heat, pH, an alternating magnetic field, or even enzymes. Surface functionalization can also modulate other properties, such as biocompatibility, stability, and specificity, deeming VLPs as potential vaccine candidates or delivery systems. This review aims to address the different types of surface functionalization of VLPs, highlighting the more recent cutting-edge technologies that have been explored for the design of tailored VLPs, their importance, and their consequent applicability in the medical field.


Asunto(s)
Vacunas de Partículas Similares a Virus , Humanos , Vacunas de Partículas Similares a Virus/inmunología , Nanopartículas/química , Animales , Virión/química , Sistemas de Liberación de Medicamentos/métodos
2.
Daru ; 2023 Oct 31.
Artículo en Inglés | MEDLINE | ID: mdl-37903944

RESUMEN

OBJECTIVES: Veterinarians and pharmacists are familiar with the efficacy and safety aspects attributed to active pharmaceutical ingredients included in medicines, but they are rarely concerned with the safety of excipients present in medicines. Although generally recognized as safe, excipients are not chemically inert and may produce adverse events in certain animal populations. This review aims to present excipients of concern to these populations and highlight their relevance for rational veterinary pharmacotherapy. EVIDENCE ACQUISITION: A comprehensive review of the literature about the existence of adverse reactions in animals caused by pharmaceutical excipients was carried out based on an exploratory study. An overview of the correct conditions of use and safety of these excipients has also been provided, with information about their function, the proportion in which they are included in the different pharmaceutical dosage forms and the usual routes of administration. RESULTS: We identified 18 excipients considered of concern due to their potential to cause harm to the health of specific animal populations: bentonite, benzalkonium chloride, benzoic acid, benzyl alcohol, ethanol, lactose, mannitol, mineral oil, monosodium glutamate, polyethylene glycol, polysorbate, propylene glycol, sodium benzoate, sodium carboxymethylcellulose, sodium lauryl sulfate, sulfites, polyoxyethylene castor oil derivatives, and xylitol. Among the 135 manuscripts listed, only 24 referred to studies in which the substances were correctly evaluated as excipients. CONCLUSIONS: Based on the information presented in this review, the authors hope to draw the attention of professionals involved in veterinary pharmacotherapy to the existence of excipients of concern in medicines. This information contributes to rational veterinary pharmacotherapy and supports veterinary pharmacovigilance actions. We hope to shed light on the subject and encourage studies and new manuscripts that address the safety of pharmaceutical excipients to the animal population.

3.
Comput Struct Biotechnol J ; 21: 4336-4353, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37711187

RESUMEN

G protein-coupled receptors (GPCRs) are known to dimerize, but the molecular and structural basis of GPCR dimers is not well understood. In this study, we developed a computational framework to generate models of symmetric and asymmetric GPCR dimers using different monomer activation states and identified their most likely interfaces with molecular details. We chose the dopamine receptor D2 (D2R) homodimer as a case study because of its biological relevance and the availability of structural information. Our results showed that transmembrane domains 4 and 5 (TM4 and TM5) are mostly found at the dimer interface of the D2R dimer and that these interfaces have a subset of key residues that are mostly nonpolar from TM4 and TM5, which was in line with experimental studies. In addition, TM2 and TM3 appear to be relevant for D2R dimers. In some cases, the inactive configuration is unaffected by the partnered protomer, whereas in others, the active protomer adopts the properties of an inactive receptor. Additionally, the ß-arrestin configuration displayed the properties of an active receptor in the absence of an agonist, suggesting that a switch to another meta-state during dimerization occurred. Our findings are consistent with the experimental data, and this method can be adapted to study heterodimers and potentially extended to include additional proteins such as G proteins or ß-arrestins. In summary, this approach provides insight into the impact of the conformational status of partnered protomers on the overall quaternary GPCR macromolecular structure and dynamics.

4.
J Biomed Mater Res A ; 111(1): 35-44, 2023 01.
Artículo en Inglés | MEDLINE | ID: mdl-36069387

RESUMEN

Electroactive smart materials play an important role for tissue regenerative applications. Poly(vinylidene fluoride) (PVDF) is a specific subtype of piezoelectric electroactive material that generates electrical potential upon mechanical stimulation. This work focuses on the application of piezoelectric PVDF films for neural differentiation. Human neural precursor cells (hNPCs) are cultured on piezoelectric poled and non-poled ß-PVDF films with or without a pre-coating step of poly-d-lysine and laminin (PDL/L). Subsequently, hNPCs differentiation into the neuronal lineage is assessed (MAP2+ and DCX+ ) under static or dynamic (piezoelectric stimulation) culture conditions. The results demonstrate that poled and coated ß-PVDF films induce neuronal differentiation under static culture conditions which is further enhanced with mechanical stimulation. In silico calculations of the electrostatic potential of different domains of laminin, highlight the high polarity of those domains, which shows a clear preference to interact with the varying surface electric field of the piezoelectric material under mechanical stimulation. These interactions might explain the higher neuronal differentiation induced by poled ß-PVDF films pre-coated with PDL/L under dynamic conditions. Our results suggest that electromechanical stimuli, such as the ones induced by piezoelectric ß-PVDF films, are suitable to promote neuronal differentiation and hold great promise for the development of neuroregenerative therapies.


Asunto(s)
Laminina , Células-Madre Neurales , Humanos , Electricidad , Laminina/farmacología , Polivinilos/farmacología , Estimulación Eléctrica
5.
Bioengineering (Basel) ; 9(11)2022 Nov 19.
Artículo en Inglés | MEDLINE | ID: mdl-36421114

RESUMEN

Virus-like particles (VLPs) are nanoplatforms comprised of one or more viral proteins with the capacity to self-assemble without viral genetic material. VLPs arise as promising nanoparticles (NPs) that can be exploited as vaccines, as drug delivery vehicles or as carriers of imaging agents. Engineered antibody constructs, namely single-chain variable fragments (scFv), have been explored as relevant molecules to direct NPs to their target. A vector containing the scFv of an antibody, aimed at the human epidermal growth factor receptor 2 (HER2) and fused to the human immunodeficiency virus (HIV) protein gp41, was previously constructed. The work herein describes the early results concerning the production and the characterization of HIV-1-based VLPs expressing this protein, which could function as potential non-toxic tools for transporting drugs and/or imaging agents.

6.
Front Cell Infect Microbiol ; 12: 997875, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36275021

RESUMEN

New approaches aimed at identifying patient-specific drug targets and addressing unmet clinical needs in the framework of precision medicine are a strong motivation for researchers worldwide. As scientists learn more about proteins that drive known diseases, they are better able to design promising therapeutic approaches to target those proteins. The field of nanotechnology has been extensively explored in the past years, and nanoparticles (NPs) have emerged as promising systems for target-specific delivery of drugs. Virus-like particles (VLPs) arise as auspicious NPs due to their intrinsic properties. The lack of viral genetic material and the inability to replicate, together with tropism conservation and antigenicity characteristic of the native virus prompted extensive interest in their use as vaccines or as delivery systems for therapeutic and/or imaging agents. Owing to its simplicity and non-complex structure, one of the viruses currently under study for the construction of VLPs is the human immunodeficiency virus type 1 (HIV-1). Typically, HIV-1-based VLPs are used for antibody discovery, vaccines, diagnostic reagent development and protein-based assays. This review will be centered on the use of HIV-1-based VLPs and their potential biomedical applications.


Asunto(s)
VIH-1 , Nanopartículas , Humanos , VIH-1/genética
7.
J Basic Microbiol ; 62(1): 63-73, 2022 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-34850414

RESUMEN

Founder females of the leaf-cutting ant species Atta sexdens experience high mortality during the founding and establishment of their colonies. The foundation site is crucial for the success of a new colony. In this study, we isolated and identified actinobacteria from fungus garden chambers of A. sexdens colony growth in soils from (1) forested areas without leafcutter ant nests and (2) open ground areas close to leafcutter ant nests. The inhibitory effect of these isolates on pathogenic fungi and the mutualistic fungus cultivated by leafcutter ants was evaluated. The 16S rRNA gene sequences were employed to identify nine selected actinobacteria species found in the soil: Streptomyces (6), Nocardia (2), and Kitasatospora (1). One Streptomyces and one Kitasatospora isolate inhibited all the tested fungi. Since there is no evidence of actinobacteria cultivation in the workers' cuticle of the Atta genus, our results corroborate the hypothesis that these workers may establish temporary adaptive symbiosis with soil microorganisms that produce antibiotic substances, living in some parts of their nest, or even inside their bodies. Pathogenic fungi are a risk factor that can be controlled by actinobacteria metabolites from soils, with minimal energy cost to the colony.


Asunto(s)
Actinobacteria , Hormigas , Actinobacteria/genética , Animales , Hongos/genética , Humanos , ARN Ribosómico 16S/genética , Suelo , Simbiosis
8.
Molecules ; 26(23)2021 Dec 03.
Artículo en Inglés | MEDLINE | ID: mdl-34885928

RESUMEN

Considering our interest in the use of peptides as potential target-specific drugs or as delivery vectors of metallodrugs for various biomedical applications, it is crucial to explore improved synthetic methodologies to accomplish the highest peptide crude purity in the shortest time possible. Therefore, we compared "classical" fluorenylmethoxycarbonyl (Fmoc)-solid phase peptide synthesis (SPPS) with ultrasound(US)-assisted SPPS based on the preparation of three peptides, namely the fibroblast growth factor receptor 3(FGFR3)-specific peptide Pep1 (VSPPLTLGQLLS-NH2) and the novel peptides Pep2 (RQMATADEA-NH2) and Pep3 (AAVALLPAVLLALLAPRQMATADEA-NH2), which are being developed aimed at interfering with the intracellular protein-protein interaction(PPI) RANK-TRAF6. Our results demonstrated that US-assisted SPPS led to a 14-fold (Pep1) and 4-fold time reduction (Pep2) in peptide assembly compared to the "classical" method. Interestingly, US-assisted SPPS yielded Pep1 in higher purity (82%) than the "classical" SPPS (73%). The significant time reduction combined with high crude peptide purity attained prompted use to apply US-assisted SPPS to the large peptide Pep3, which displays a high number of hydrophobic amino acids and homooligo-sequences. Remarkably, the synthesis of this 25-mer peptide was attained during a "working day" (347 min) in moderate purity (approx. 49%). In conclusion, we have reinforced the importance of using US-SPPS towards facilitating the production of peptides in shorter time with increased efficacy in moderate to high crude purity. This is of special importance for long peptides such as the case of Pep3.


Asunto(s)
Péptidos/síntesis química , Técnicas de Síntesis en Fase Sólida/métodos , Humanos , Péptidos/química , Receptor Activador del Factor Nuclear kappa-B/química , Receptores de Factores de Crecimiento de Fibroblastos/química , Sonicación/métodos , Factor 6 Asociado a Receptor de TNF/química
9.
ACS Synth Biol ; 10(11): 3209-3235, 2021 11 19.
Artículo en Inglés | MEDLINE | ID: mdl-34736321

RESUMEN

SARS-CoV-2 triggered a worldwide pandemic disease, COVID-19, for which an effective treatment has not yet been settled. Among the most promising targets to fight this disease is SARS-CoV-2 main protease (Mpro), which has been extensively studied in the last few months. There is an urgency for developing effective computational protocols that can help us tackle these key viral proteins. Hence, we have put together a robust and thorough pipeline of in silico protein-ligand characterization methods to address one of the biggest biological problems currently plaguing our world. These methodologies were used to characterize the interaction of SARS-CoV-2 Mpro with an α-ketoamide inhibitor and include details on how to upload, visualize, and manage the three-dimensional structure of the complex and acquire high-quality figures for scientific publications using PyMOL (Protocol 1); perform homology modeling with MODELLER (Protocol 2); perform protein-ligand docking calculations using HADDOCK (Protocol 3); run a virtual screening protocol of a small compound database of SARS-CoV-2 candidate inhibitors with AutoDock 4 and AutoDock Vina (Protocol 4); and, finally, sample the conformational space at the atomic level between SARS-CoV-2 Mpro and the α-ketoamide inhibitor with Molecular Dynamics simulations using GROMACS (Protocol 5). Guidelines for careful data analysis and interpretation are also provided for each Protocol.


Asunto(s)
Antivirales/química , Tratamiento Farmacológico de COVID-19 , Bases de Datos de Proteínas , Simulación del Acoplamiento Molecular , Simulación de Dinámica Molecular , SARS-CoV-2/química , Proteínas Virales/química , Antivirales/uso terapéutico , Humanos , Ligandos
10.
Front Mol Biosci ; 8: 715215, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34621786

RESUMEN

This paper describes an exciting big data analysis compiled in a freely available database, which can be applied to characterize the coupling of different G-Protein coupled receptors (GPCRs) families with their intracellular partners. Opioid receptor (OR) family was used as case study in order to gain further insights into the physiological properties of these important drug targets, known to be associated with the opioid crisis, a huge socio-economic issue directly related to drug abuse. An extensive characterization of all members of the ORs family (µ (MOR), δ (DOR), κ (KOR), nociceptin (NOP)) and their corresponding binding partners (ARRs: Arr2, Arr3; G-protein: Gi1, Gi2, Gi3, Go, Gob, Gz, Gq, G11, G14, G15, G12, Gssh, Gslo) was carried out. A multi-step approach including models' construction (multiple sequence alignment, homology modeling), complex assembling (protein complex refinement with HADDOCK and complex equilibration), and protein-protein interface characterization (including both structural and dynamics analysis) were performed. Our database can be easily applied to several GPCR sub-families, to determine the key structural and dynamical determinants involved in GPCR coupling selectivity.

11.
Int J Mol Sci ; 22(7)2021 Mar 29.
Artículo en Inglés | MEDLINE | ID: mdl-33805556

RESUMEN

Biological therapies, such as recombinant proteins, are nowadays amongst the most promising approaches towards precision medicine. One of the most innovative methodologies currently available aimed at improving the production yield of recombinant proteins with minimization of costs relies on the combination of in silico studies to predict and deepen the understanding of the modified proteins with an experimental approach. The work described herein aims at the design and production of a biomimetic vector containing the single-chain variable domain fragment (scFv) of an anti-HER2 antibody fragment as a targeting motif fused with HIV gp41. Molecular modeling and docking studies were performed to develop the recombinant protein sequence. Subsequently, the DNA plasmid was produced and HEK-293T cells were transfected to evaluate the designed vector. The obtained results demonstrated that the plasmid construction is robust and can be expressed in the selected cell line. The multidisciplinary integrated in silico and experimental strategy adopted for the construction of a recombinant protein which can be used in HER2+-targeted therapy paves the way towards the production of other therapeutic proteins in a more cost-effective way.


Asunto(s)
Ingeniería de Proteínas/métodos , Proteínas Recombinantes/genética , Anticuerpos de Cadena Única/química , Anticuerpos de Cadena Única/genética , Simulación por Computador , Vectores Genéticos , Células HEK293 , Proteína gp41 de Envoltorio del VIH/química , Proteína gp41 de Envoltorio del VIH/genética , Humanos , Simulación del Acoplamiento Molecular , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Trastuzumab/genética
12.
Eur J Pharm Biopharm ; 158: 233-244, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-33271301

RESUMEN

The tumour endothelial marker 1 (TEM1/endosialin/CD248) is a receptor overexpressed in several human solid tumours and silenced in normal adult tissues, representing a suitable and potentially safe target for radioimmunotherapy of sarcoma. To develop new tools with improved TEM1 targeting properties, a new panel of antibody fragments was for the first time evaluated preclinically following 125I radiolabelling. The antibody fragment 1C1m-Fc, with the highest human/murine TEM1 binding affinity, was extensively characterized in vitro and in vivo in a Ewing's sarcoma human xenograft mouse model. In silico studies were also performed to elucidate the influence of a single amino acid mutation in the complementarity-determining region (CDR3) of the heavy chain, upon affinity maturation of the parental clone 1C1-Fc. From this study, 1C1m-Fc emerged as a promising candidate for the development of TEM1-targeted radioimmunoconjugates, namely to be further explored for theranostic applications with other suitable medical radionuclides.


Asunto(s)
Antígenos CD/metabolismo , Antígenos de Neoplasias/metabolismo , Inmunoconjugados/administración & dosificación , Neoplasias/radioterapia , Radioinmunoterapia/métodos , Anticuerpos de Cadena Única/administración & dosificación , Animales , Línea Celular Tumoral , Regiones Determinantes de Complementariedad/genética , Simulación por Computador , Femenino , Humanos , Inmunoconjugados/genética , Inmunoconjugados/farmacocinética , Radioisótopos de Yodo , Ratones , Mutación , Proteínas Recombinantes/administración & dosificación , Proteínas Recombinantes/genética , Proteínas Recombinantes/farmacocinética , Anticuerpos de Cadena Única/genética , Anticuerpos de Cadena Única/farmacocinética , Distribución Tisular , Ensayos Antitumor por Modelo de Xenoinjerto
13.
J Chem Inf Model ; 60(8): 3969-3984, 2020 08 24.
Artículo en Inglés | MEDLINE | ID: mdl-32692555

RESUMEN

G-Protein coupled receptors (GPCRs) are involved in a myriad of pathways key for human physiology through the formation of complexes with intracellular partners such as G-proteins and arrestins (Arrs). However, the structural and dynamical determinants of these complexes are still largely unknown. Herein, we developed a computational big-data pipeline that enables the structural characterization of GPCR complexes with no available structure. This pipeline was used to study a well-known group of catecholamine receptors, the human dopamine receptor (DXR) family and its complexes, producing novel insights into the physiological properties of these important drug targets. A detailed description of the protein interfaces of all members of the DXR family (D1R, D2R, D3R, D4R, and D5R) and the corresponding protein interfaces of their binding partners (Arrs: Arr2 and Arr3; G-proteins: Gi1, Gi2, Gi3, Go, Gob, Gq, Gslo, Gssh, Gt2, and Gz) was generated. To produce reliable structures of the DXR family in complex with either G-proteins or Arrs, we performed homology modeling using as templates the structures of the ß2-adrenergic receptor (ß2AR) bound to Gs, the rhodopsin bound to Gi, and the recently acquired neurotensin receptor-1 (NTSR1) and muscarinic 2 receptor (M2R) bound to arrestin (Arr). Among others, the work demonstrated that the three partner groups, Arrs and Gs- and Gi-proteins, are all structurally and dynamically distinct. Additionally, it was revealed the involvement of different structural motifs in G-protein selective coupling between D1- and D2-like receptors. Having constructed and analyzed 50 models involving DXR, this work represents an unprecedented large-scale analysis of GPCR-intracellular partner interface determinants. All data is available at www.moreiralab.com/resources/dxr.


Asunto(s)
Arrestinas , Proteínas de Unión al GTP , Receptores Acoplados a Proteínas G/metabolismo , Humanos , Receptores Adrenérgicos beta 2/metabolismo , Receptores Dopaminérgicos , Transducción de Señal
14.
Int J Mol Sci ; 21(4)2020 Feb 22.
Artículo en Inglés | MEDLINE | ID: mdl-32098424

RESUMEN

Influenza (flu) is a contagious viral disease, which targets the human respiratory tract and spreads throughout the world each year. Every year, influenza infects around 10% of the world population and between 290,000 and 650,000 people die from it according to the World Health Organization (WHO). Influenza viruses belong to the Orthomyxoviridae family and have a negative sense eight-segment single-stranded RNA genome that encodes 11 different proteins. The only control over influenza seasonal epidemic outbreaks around the world are vaccines, annually updated according to viral strains in circulation, but, because of high rates of mutation and recurrent genetic assortment, new viral strains of influenza are constantly emerging, increasing the likelihood of pandemics. Vaccination effectiveness is limited, calling for new preventive and therapeutic approaches and a better understanding of the virus-host interactions. In particular, grasping the role of influenza non-structural protein 1 (NS1) and related known interactions in the host cell is pivotal to better understand the mechanisms of virus infection and replication, and thus propose more effective antiviral approaches. In this review, we assess the structure of NS1, its dynamics, and multiple functions and interactions, to highlight the central role of this protein in viral biology and its potential use as an effective therapeutic target to tackle seasonal and pandemic influenza.


Asunto(s)
Subtipo H1N1 del Virus de la Influenza A/inmunología , Vacunas contra la Influenza/inmunología , Gripe Humana/inmunología , Infecciones por Orthomyxoviridae/inmunología , Proteínas no Estructurales Virales/inmunología , Virión/inmunología , Animales , Humanos , Subtipo H1N1 del Virus de la Influenza A/genética , Subtipo H1N1 del Virus de la Influenza A/metabolismo , Vacunas contra la Influenza/administración & dosificación , Gripe Humana/prevención & control , Gripe Humana/virología , Mutación , Infecciones por Orthomyxoviridae/prevención & control , Infecciones por Orthomyxoviridae/virología , Conformación Proteica , Proteínas no Estructurales Virales/química , Proteínas no Estructurales Virales/metabolismo , Virión/genética , Virión/metabolismo
15.
Prog Mol Biol Transl Sci ; 169: 105-149, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-31952684

RESUMEN

GPCR oligomerization has emerged as a hot topic in the GPCR field in the last years. Receptors that are part of these oligomers can influence each other's function, although it is not yet entirely understood how these interactions work. The existence of such a highly complex network of interactions between GPCRs generates the possibility of alternative targets for new therapeutic approaches. However, challenges still exist in the characterization of these complexes, especially at the interface level. Different experimental approaches, such as FRET or BRET, are usually combined to study GPCR oligomer interactions. Computational methods have been applied as a useful tool for retrieving information from GPCR sequences and the few X-ray-resolved oligomeric structures that are accessible, as well as for predicting new and trustworthy GPCR oligomeric interfaces. Machine-learning (ML) approaches have recently helped with some hindrances of other methods. By joining and evaluating multiple structure-, sequence- and co-evolution-based features on the same algorithm, it is possible to dilute the issues of particular structures and residues that arise from the experimental methodology into all-encompassing algorithms capable of accurately predict GPCR-GPCR interfaces. All these methods used as a single or a combined approach provide useful information about GPCR oligomerization and its role in GPCR function and dynamics. Altogether, we present experimental, computational and machine-learning methods used to study oligomers interfaces, as well as strategies that have been used to target these dynamic complexes.


Asunto(s)
Receptores Acoplados a Proteínas G/química , Algoritmos , Sitio Alostérico , Biología Computacional , Bases de Datos de Proteínas , Evolución Molecular , Transferencia Resonante de Energía de Fluorescencia , Humanos , Aprendizaje Automático , Simulación de Dinámica Molecular , Mutación , Unión Proteica , Conformación Proteica , Mapeo de Interacción de Proteínas , Multimerización de Proteína , Solventes , Máquina de Vectores de Soporte
16.
Curr Med Chem ; 27(5): 760-794, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-30182840

RESUMEN

Paediatric Acquired ImmunoDeficiency Syndrome (AIDS) is a life-threatening and infectious disease in which the Human Immunodeficiency Virus (HIV) is mainly transmitted through Mother-To- Child Transmission (MTCT) during pregnancy, labour and delivery, or breastfeeding. This review provides an overview of the distinct therapeutic alternatives to abolish the systemic viral replication in paediatric HIV-1 infection. Numerous classes of antiretroviral agents have emerged as therapeutic tools for downregulation of different steps in the HIV replication process. These classes encompass Non- Nucleoside Analogue Reverse Transcriptase Inhibitors (NNRTIs), Nucleoside/Nucleotide Analogue Reverse Transcriptase Inhibitors (NRTIs/NtRTIs), INtegrase Inhibitors (INIs), Protease Inhibitors (PIs), and Entry Inhibitors (EIs). Co-administration of certain antiretroviral drugs with Pharmacokinetic Enhancers (PEs) may boost the effectiveness of the primary therapeutic agent. The combination of multiple antiretroviral drug regimens (Highly Active AntiRetroviral Therapy - HAART) is currently the standard therapeutic approach for HIV infection. So far, the use of HAART offers the best opportunity for prolonged and maximal viral suppression, and preservation of the immune system upon HIV infection. Still, the frequent administration of high doses of multiple drugs, their inefficient ability to reach the viral reservoirs in adequate doses, the development of drug resistance, and the lack of patient compliance compromise the complete HIV elimination. The development of nanotechnology-based drug delivery systems may enable targeted delivery of antiretroviral agents to inaccessible viral reservoir sites at therapeutic concentrations. In addition, the application of Computer-Aided Drug Design (CADD) approaches has provided valuable tools for the development of anti-HIV drug candidates with favourable pharmacodynamics and pharmacokinetic properties.


Asunto(s)
Antirretrovirales/uso terapéutico , Infecciones por VIH , Niño , Infecciones por VIH/tratamiento farmacológico , Humanos , Inhibidores de la Transcriptasa Inversa
17.
Biomolecules ; 9(11)2019 11 05.
Artículo en Inglés | MEDLINE | ID: mdl-31694351

RESUMEN

Human epidermal growth factor 2 (HER2) is a ligand-free tyrosine kinase receptor of the HER family that is overexpressed in some of the most aggressive tumours. Although it is known that HER2 dimerization involves a specific region of its extracellular domain, the so-called "dimerization arm", the mechanism of dimerization inhibition remains uncertain. However, uncovering how antibody interactions lead to inhibition of HER2 dimerization is of key importance in understanding its role in tumour progression and therapy. Herein, we employed several computational modelling techniques for a molecular-level understanding of the interactions between HER and specific anti-HER2 antibodies, namely an antigen-binding (Fab) fragment (F0178) and a single-chain variable fragment from Trastuzumab (scFv). Specifically, we investigated the effects of antibody-HER2 interactions on the key residues of "dimerization arm" from molecular dynamics (MD) simulations of unbound HER (in a total of 1 µs), as well as ScFv:HER2 and F0178:HER2 complexes (for a total of 2.5 µs). A deep surface analysis of HER receptor revealed that the binding of specific anti-HER2 antibodies induced conformational changes both in the interfacial residues, which was expected, and in the ECDII (extracellular domain), in particular at the "dimerization arm", which is critical in establishing protein-protein interface (PPI) interactions. Our results support and advance the knowledge on the already described trastuzumab effect on blocking HER2 dimerization through synergistic inhibition and/or steric hindrance. Furthermore, our approach offers a new strategy for fine-tuning target activity through allosteric ligands.


Asunto(s)
Anticuerpos/farmacología , Receptor ErbB-2/química , Receptor ErbB-2/metabolismo , Humanos , Fragmentos Fab de Inmunoglobulinas/farmacología , Modelos Moleculares , Simulación de Dinámica Molecular , Multimerización de Proteína/efectos de los fármacos , Trastuzumab/farmacología
18.
Biosci. j. (Online) ; 35(3): 869-877, may./jun. 2019. tab, graf
Artículo en Inglés | LILACS | ID: biblio-1048695

RESUMEN

Selecting a trait linked to metabolic pathways that enhance resistance and tolerance to biotic and abiotic stresses may be an excellent alternative. A practical approach to increase the productivity of annual crops is to maximize the photosynthetic efficiency in plant breeding. The purpose of this study was to discriminate common bean genotypes during physiological senescence with regard to the stay-green trait and analyze its effects on other traits of agronomic interest. Ten common bean genotypes were analyzed in a randomized complete block design with three replications. The stay-green trait was assessed by visual scores at harvest. The chlorophyll a content, chlorophyll b and green pod color were also evaluated during senescence (75, 80, 85, 90, and 95 days after sowing). Pod maturation of all evaluated genotypes was standard when they reached 95 days after sowing. The stay - green feature was detected only in the genotypes BRS Expedito, FT - Tarumã and BAF071. Genetic variability in the mechanisms related to late senescence is indicated by: i) a high initial chlorophyll a content; and ii) reduced chlorophyll degradation throughout senescence. Plants with stay-green properties were significantly correlated with a lower incidence and severity of plant pathology, greater stem diameter, and higher grain yield.


Selecionar uma característica relacionada às vias metabólicas responsáveis pelo aumento da resistência e/ou tolerância a estresses bióticos e abióticos pode ser uma excelente alternativa no melhoramento de plantas. Uma abordagem prática para aumentar a produtividade das culturas anuais é maximizar a eficiência fotossintética. O objetivo do trabalho foi discriminar genótipos de feijão durante a senescência fisiológica quanto ao caráter stay-green e correlacionar os efeitos sobre outros caracteres de interesse agronômico. Foram avaliados dez genótipos de feijão submetidos ao delineamento de blocos casualizados com três repetições. O caráter stay-green foi mensurado por escores de notas visuais na colheita. Também foram avaliados o teor de clorofila a, teor de clorofila b e coloração verde do legume no decorrer da senescência (75, 80, 85, 90, 95 dias após semeadura). A maturação dos legumes foi padrão para todos osgenótipos avaliados. Os genótipos BRS Expedito, FT - Tarumã e BAF071 apresentaram stay-green, diferentemente dos demais. A variabilidade genética nos mecanismos relacionados a senescência tardia, são detectadas pela: i) elevado teor de clorofila a inicial; e ii) reduzida degradação de clorofila ao longo da senescência. As plantas com stay-green apresentaram correlações significativas com menor incidência e severidade de fitopatologias, maior diâmetro do caule e rendimento de grãos.


Asunto(s)
Estrés Fisiológico , Phaseolus , Fitomejoramiento
19.
Rev Bras Enferm ; 72(1): 304-308, 2019.
Artículo en Inglés, Portugués | MEDLINE | ID: mdl-30916299

RESUMEN

OBJECTIVE: To describe the investigative path of analysis and the operationality of concepts based on Martin Heidegger's theoretical and philosophical framework. METHOD: Theoretical reflection on the phenomenon of pregnancy in a woman with heart disease. RESULTS: Stages of the investigative movement were evidenced based on the pre-reflection related to the object of study and to the search for the phenomenal meaning, using the existential and analytical Hermeneutics as the approach and resulting in the reach of the phenomenal totality. CONCLUSION: The worldview of the researcher, who considered the subjectivities of the person in a health or disease situation, favored the announcement of the referential by the object of study. Knowledge production in the light of Martin Heidegger's phenomenology unveiled phenomena lived and experienced in the Health and Nursing field, provided of epistemological rigor that demanded appropriation of concepts inherent to the existential analytics.


Asunto(s)
Conocimiento , Filosofía en Enfermería , Femenino , Cardiopatías/enfermería , Cardiopatías/psicología , Hermenéutica , Humanos , Embarazo , Investigación Cualitativa
20.
Rev. bras. enferm ; 72(1): 304-308, Jan.-Feb. 2019. graf
Artículo en Inglés | LILACS, BDENF | ID: biblio-990646

RESUMEN

ABSTRACT Objective: To describe the investigative path of analysis and the operationality of concepts based on Martin Heidegger's theoretical and philosophical framework. Method: Theoretical reflection on the phenomenon of pregnancy in a woman with heart disease. Results: Stages of the investigative movement were evidenced based on the pre-reflection related to the object of study and to the search for the phenomenal meaning, using the existential and analytical Hermeneutics as the approach and resulting in the reach of the phenomenal totality. Conclusion: The worldview of the researcher, who considered the subjectivities of the person in a health or disease situation, favored the announcement of the referential by the object of study. Knowledge production in the light of Martin Heidegger's phenomenology unveiled phenomena lived and experienced in the Health and Nursing field, provided of epistemological rigor that demanded appropriation of concepts inherent to the existential analytics.


RESUMEN Objetivo: Describir el camino investigativo de análisis y la operación de los conceptos sostenidos en el referencial teórico-filosófico y metodológico de Martin Heidegger. Método: Reflexión teórica del fenómeno de gestar siendo mujer portadora de cardiopatía. Resultados: Se evidenciaron las etapas del movimiento de investigación a partir del pre-reflexivo relativo al objeto de estudio y de la búsqueda del sentido fenomenal hacia la hermenéutica como analítica existencial, culminando en el alcance de la totalidad fenoménica. Conclusión: La visión de mundo del investigador, que consideró las subjetividades de la persona en situación de salud o enfermedad, favoreció que el objeto de estudio anunciara el referencial. La producción de conocimiento a la luz de la fenomenología de Martin Heidegger desveló fenómenos vividos y vivenciados en el campo de la salud y de la enfermería, mediante rigor epistemológico que exigió apropiación de conceptos inherentes a la analítica existencial.


RESUMO Objetivo: Descrever o caminho investigativo de análise e a operacionalidade de conceitos sustentados no referencial teórico-filosófico e metodológico de Martin Heidegger. Método: Reflexão teórica do fenômeno de gestar sendo mulher portadora de cardiopatia. Resultados: Evidenciaram-se as etapas do movimento de investigação a partir do pré-reflexivo relativo ao objeto de estudo e da busca do sentido fenomenal na direção da hermenêutica como analítica existencial, culminando no alcance da totalidade fenomênica. Conclusão: A visão de mundo do investigador, que considerou as subjetividades da pessoa em situação de saúde ou doença, favoreceu que o objeto de estudo anunciasse o referencial. A produção de conhecimento à luz da fenomenologia de Martin Heidegger desvelou fenômenos vividos e vivenciados no campo da saúde e da enfermagem, mediante rigor epistemológico que exigiu apropriação de conceitos inerentes à analítica existencial.


Asunto(s)
Humanos , Femenino , Embarazo , Filosofía en Enfermería , Conocimiento , Investigación Cualitativa , Hermenéutica , Cardiopatías/enfermería , Cardiopatías/psicología
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