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1.
Pest Manag Sci ; 79(5): 1885-1896, 2023 May.
Artículo en Inglés | MEDLINE | ID: mdl-36700288

RESUMEN

BACKGROUND: In order to design compounds with fresh molecular skeleton to break through the limitation of available agrochemicals, a series of 36 novel selenenyl sulfide compounds were chemically synthesized, and their biological activities were fully evaluated against tobacco mosaic virus (TMV), 14 plant pathogenic fungi, three insect species and plant acetohydroxyacid synthase (AHAS). RESULTS: All the target compounds were characterized by proton nuclear magnetic resonance (1 H-NMR), carbon-13 (13 C)-NMR, selenium-77 (77 Se)-NMR, and high-resolution mass spectrometry (HRMS). The crystal structure of 10j indicated that the Se-S bond was successfully constructed. Compounds 10d, 10h, 10s, 10u, 10aa, 10ac, 10ae, 10ag, and 10ai exhibited 40%, 43%, 39%, 41%, 47%, 46%, 47%, 42%, and 39% anti-TMV activities at 500 mg L-1 , better than that of ribavirin. The median effective concentration (EC50 ) against Sclerotinia sclerotiorum of 10ac was 6.69 mg L-1 and EC50 values against Physalospora piricola and Pyricularia grisea of 10z were 12.25 mg L-1 and 15.27 mg L-1 , respectively, superior to the corresponding values of chlorothalonil. Compounds 10c and 10v demonstrated 100% larvicidal activity against Culex pipiens pallens at 5 mg L-1 , while 10a displayed 100% insecticidal activity against Mythimna separata at 200 mg L-1 . Compounds 10c, 10j, and 10o showed > 60% inhibitions against plant AHAS at 10 µmol L-1 . From the quantum calculation, highest occupied molecular orbital (HOMO) was considered as a factor that affects the anti-TMV activity. CONCLUSION: The preliminary results suggested that more efforts should be devoted to exploring the selenenyl sulfides for the discovery of new leads of antiviral agent, fungicide, insecticide or AHAS inhibitors as potential agrochemicals for crop protection. © 2023 Society of Chemical Industry.


Asunto(s)
Fungicidas Industriales , Insecticidas , Mariposas Nocturnas , Virus del Mosaico del Tabaco , Animales , Relación Estructura-Actividad , Fungicidas Industriales/química , Antivirales , Insecticidas/química , Sulfuros/farmacología , Estructura Molecular , Diseño de Fármacos
2.
Pestic Biochem Physiol ; 188: 105261, 2022 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-36464366

RESUMEN

Based on the previous finding that a substitution at 5-position of the benzene ring is favorable to enhance the degradation rates of sulfonylurea herbicides, a total of 16 novel 2,5-disubsituted sulfonylurea compounds were chemically synthesized and fully characterized by means of 1H NMR, 13C NMR, HRMS and X-ray diffraction. By using HPLC analysis, the degradation behavior of M03, a compound belonging to this family, was studied and confirmed that chlorsulfuron itself is not a degraded product of the 2,5-disubstituted sulfonylureas. Inhibition constants against plant acetohydroxyacid synthase (AHAS) were determined for selected compounds, among which SU3 showed seven times stronger activity against the mutant W574L enzyme than chlorsulfuron. Molecular docking suggested that the substituted group at 5-position of benzene ring is likely to interact with the surrounding residues Met200 and Asp376 of AtAHAS. From the greenhouse herbicidal assay and crop safety test, SU5 and SU6 are considered as herbicide candidates to control dicotyledon weeds in corn, while SU3 is likely to be a promising candidate to control dicotyledon weed species and barnyard grass in wheat. The present research has therefore provided some new insights to understand the structure-activity relationships of herbicidal sulfonylureas with di-substitutions at benzene ring.


Asunto(s)
Benceno , Herbicidas , Simulación del Acoplamiento Molecular , Compuestos de Sulfonilurea/farmacología , Sulfonamidas , Herbicidas/farmacología
3.
Chem Biol Drug Des ; 100(4): 487-501, 2022 10.
Artículo en Inglés | MEDLINE | ID: mdl-35792871

RESUMEN

A series of 51 novel sulfonylurea compounds with ortho-alkoxy substituent at phenyl ring were chemically synthesized and spectroscopically characterized. The biological activities of the target compounds were evaluated using the enzyme inhibition against acetohydroxyacid synthase (AHAS; EC 2.2.1.6) from fungal or plant source, as well as cell-based antifungal assay and greenhouse pot herbicidal assay. Among the target compounds, 6e showed desirable antifungal activity against Candida albicans standard isolate sc5314 with minimum inhibition concentration (MIC) of 0.39 mg/L (0.98 µM) after 24 h, and 6a demonstrated promising pre-emergence herbicidal activity against Echinochloacrus-galli at 30 g/ha dosage. Representative compounds 6a, 6e, and 6i showed no cell cytotoxicity even at 40 mg/L concentration. Theoretical DFT calculations indicated HOMO maps should be considered to understand the structure-activity relationships. The present study has hence provided useful information for further discovery of novel antifungal agents or selective herbicides.


Asunto(s)
Acetolactato Sintasa , Herbicidas , Acetolactato Sintasa/química , Acetolactato Sintasa/metabolismo , Alcoholes , Antifúngicos/química , Antifúngicos/farmacología , Inhibidores Enzimáticos/química , Herbicidas/química , Herbicidas/farmacología , Relación Estructura-Actividad , Compuestos de Sulfonilurea/farmacología
4.
J Agric Food Chem ; 70(9): 2817-2824, 2022 Mar 09.
Artículo en Inglés | MEDLINE | ID: mdl-35192362

RESUMEN

The development of herbicide-resistant germplasm is significant in solving the increasingly severe weed problem in crop fields. In this study, we, for the first time, rationally designed a predictable and effective approach to create herbicide-resistant germplasm by combining mutation-dependent biomacromolecular quantitative structure-activity relationship (MB-QSAR) and CRISPR/Cas9-mediated base-editing strategies. Our results showed that the homozygous P197F-G654D-G655S or P197F-G654N-G655S Arabidopsis plants exhibited high resistance to multiple acetohydroxyacid synthase-inhibiting herbicides, including chlorsulfuron, bispyribac-sodium, and flucarbazone-sodium. Additionally, the plants with the homozygous P197S mutant displayed increased susceptibility to bispyribac-sodium than the wild-type but more resistance to flumetsulam than other mutants. Besides, we found that the herbicide resistance levels of the gene-edited plants have a good correlation with MB-QSAR prediction.


Asunto(s)
Acetolactato Sintasa , Herbicidas , Acetolactato Sintasa/genética , Acetolactato Sintasa/metabolismo , Sistemas CRISPR-Cas , Resistencia a los Herbicidas/genética , Herbicidas/farmacología , Relación Estructura-Actividad Cuantitativa
5.
J Agric Food Chem ; 69(30): 8415-8427, 2021 Aug 04.
Artículo en Inglés | MEDLINE | ID: mdl-34283603

RESUMEN

In the present study, we have designed and synthesized a series of 42 novel sulfonylurea compounds with ortho-alkoxy substitutions at the phenyl ring and evaluated their herbicidal activities. Some target compounds showed excellent herbicidal activity against monocotyledon weed species. When applied at 7.5 g ha-1, 6-11 exhibited more potent herbicidal activity against barnyard grass (Echinochloa crus-galli) and crab grass (Digitaria sanguinalis) than commercial acetohydroxyacid synthase (AHAS; EC 2.2.1.6) inhibitors triasulfuron, penoxsulam, and nicosulfuron at both pre-emergence and postemergence conditions. 6-11 was safe for peanut for postemergence application at this ultralow dosage, suggesting that it could be considered a potential herbicide candidate for peanut fields. Although 6-11 and triasulfuron share similar chemical structures and have close Ki values for plant AHAS, a significant difference has been observed between their LUMO maps from DFT calculations, which might be a possible factor that leads to their different behaviors toward monocotyledon weed species.


Asunto(s)
Herbicidas , Alcoholes , Digitaria , Herbicidas/farmacología , Relación Estructura-Actividad , Compuestos de Sulfonilurea/farmacología
6.
Biochem Biophys Res Commun ; 557: 20-25, 2021 06 11.
Artículo en Inglés | MEDLINE | ID: mdl-33857841

RESUMEN

Protoporphyrinogen IX oxidase (PPO) is the last common enzyme in chlorophyll and heme biosynthesis pathways. In human, point mutations on PPO are responsible for the dominantly inherited disorder disease, Variegate Porphyria (VP). Of the VP-causing mutation site, the Arg59 is by far the most prevalent VP mutation residue identified. Multiple sequences alignment of PPOs shows that the Arg59 of human PPO (hPPO) is not conserved, and experiments have shown that the equivalent residues in PPO from various species are essential for enzymatic activity. In this work, it was proposed that the Arg59 performs its function by forming a hydrogen-bonding (HB) network around it in hPPO, and we investigated the role of the HB network via site-directed mutagenesis, enzymatic kinetics and computational studies. We found the integrity of the HB network around Arg59 is important for enzyme activity. The HB network maintains the substrate binding chamber by holding the side chain of Arg59, while it stabilizes the micro-environment of the isoalloxazine ring of FAD, which is favorable for the substrate-FAD interaction. Our result provides a new insight to understanding the relationship between the structure and function for hPPO that non-conserved residues can form a conserved element to maintain the function of protein.


Asunto(s)
Arginina/química , Arginina/metabolismo , Protoporfirinógeno-Oxidasa/química , Protoporfirinógeno-Oxidasa/metabolismo , Secuencia de Aminoácidos , Arginina/genética , Pruebas de Enzimas/métodos , Humanos , Enlace de Hidrógeno , Cinética , Modelos Moleculares , Mutagénesis Sitio-Dirigida/métodos , Elementos Estructurales de las Proteínas , Protoporfirinógeno-Oxidasa/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Alineación de Secuencia , Relación Estructura-Actividad
7.
J Med Chem ; 63(17): 9212-9227, 2020 09 10.
Artículo en Inglés | MEDLINE | ID: mdl-32787087

RESUMEN

Tuberculosis is an infectious disease caused by the bacterium Mycobacterium tuberculosis (Mtb). Mtb protein tyrosine phosphatase B (mPTPB) is a virulence factor required for Mtb survival in host macrophages. Consequently, mPTPB represents an exciting target for tuberculosis treatment. Here, we identified N-phenyl oxamic acid as a highly potent and selective monoacid-based phosphotyrosine mimetic for mPTPB inhibition. SAR studies on the initial hit, compound 4 (IC50 = 257 nM), resulted in several highly potent inhibitors with IC50 values lower than 20 nM for mPTPB. Among them, compound 4t showed a Ki of 2.7 nM for mPTPB with over 4500-fold preference over 25 mammalian PTPs. Kinetic, molecular docking, and site-directed mutagenesis analyses confirmed these compounds as active site-directed reversible inhibitors of mPTPB. These inhibitors can reverse the altered host cell immune responses induced by the bacterial phosphatase. Furthermore, the inhibitors possess molecular weights <400 Da, log D7.4 < 2.5, topological polar surface area < 75, ligand efficiency > 0.43, and good aqueous solubility and metabolic stability, thus offering excellent starting points for further therapeutic development.


Asunto(s)
Antituberculosos/química , Proteínas Bacterianas/antagonistas & inhibidores , Mycobacterium tuberculosis/enzimología , Ácido Oxámico/química , Proteínas Tirosina Fosfatasas/antagonistas & inhibidores , Animales , Antituberculosos/metabolismo , Antituberculosos/farmacología , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Sitios de Unión , Dominio Catalítico , Permeabilidad de la Membrana Celular/efectos de los fármacos , Supervivencia Celular/efectos de los fármacos , Diseño de Fármacos , Inhibidores Enzimáticos/química , Inhibidores Enzimáticos/metabolismo , Inhibidores Enzimáticos/farmacología , Cinética , Ratones , Microsomas Hepáticos/metabolismo , Simulación del Acoplamiento Molecular , Mutagénesis Sitio-Dirigida , Mycobacterium tuberculosis/efectos de los fármacos , Ácido Oxámico/metabolismo , Ácido Oxámico/farmacología , Proteínas Tirosina Fosfatasas/genética , Proteínas Tirosina Fosfatasas/metabolismo , Células RAW 264.7 , Relación Estructura-Actividad
8.
Pest Manag Sci ; 76(10): 3403-3412, 2020 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-31943722

RESUMEN

BACKGROUND: Intensifying weed resistance has challenged the use of existing acetohydroxyacid synthase (AHAS)-inhibiting herbicides. Hence, there is currently an urgent requirement for the discovery of a new AHAS inhibitor to effectively control AHAS herbicide-resistant weed species produced by target mutation. RESULTS: To combat weed resistance caused by AHAS with P197L mutation, we built a structure library consisting of pyrimidinyl-salicylic acid derivatives. Using the pharmacophore-linked fragment virtual screening (PFVS) approach, hit compound 8 bearing 6-phenoxymethyl substituent was identified as a potential AHAS inhibitor with antiresistance effect. Subsequently, derivatives of compound 8 were synthesized and evaluated for their inhibitory activities. The study of the enzyme-based structure-activity relationship and structure-resistance relationship studies led to the discovery of a qualified candidate, 28. This compound not only significantly inhibited the activity of wild-type Arabidopsis thaliana (At) AHAS and P197L mutant, but also exhibited good antiresistance properties (RF = 0.79). Notably, compared with bispyribac at 37.5-150 g of active ingredient per hectare (g a.i. ha-1 ), compound 27 exhibited higher growth inhibition against both sensitive and resistant Descurainia sophia, CONCLUSION: The title compounds have great potential to be developed as new leads to effectively control herbicide-resistant weeds comprising AHAS with P197L mutation. Also, our study provided a positive case for discovering novel, potent and antiresistance inhibitors using a fragment-based drug design approach.


Asunto(s)
Acetolactato Sintasa/genética , Arabidopsis , Herbicidas , Malezas , Relación Estructura-Actividad
9.
Anal Chem ; 91(21): 13582-13590, 2019 11 05.
Artículo en Inglés | MEDLINE | ID: mdl-31603309

RESUMEN

Acetohydroxyacid synthase (AHAS) exists in plants and many microorganisms (including gut flora) but not in mammals, making it an attractive drug target. Fluorescent-based methods should be practical for high-throughput screening of inhibitors. Herein, we describe the development of the first AHAS fluorogenic assay based on an intramolecular charge transfer (ICT)-based fluorescent probe. The assay is facile, sensitive, and continuous and can be applied toward various AHASs from different species, AHAS mutants, and crude cell lysates. The fluorogenic assay was successfully applied for (1) high-throughput screening of commerical herbicides toward different AHASs for choosing matching herbicides, (2) identification of a Soybean AHAS gene with broad-spectrum herbicide resistance, and (3) identification of selective inhibitors toward intestinal-bacterial AHASs. Among the AHAS inhibitors, an active agent was found for selective inhibition of obesity-associated Ruminococcus torques growth, implying the possibility of AHAS inhibitors for the ultimate goal toward antiobesity therapeutics. The fluorogenic assay opens the door for high-throughput programs in AHAS-related fields, and the design principle might be applied for development of fluorogenic assays of other synthases.


Asunto(s)
Acetolactato Sintasa/análisis , Colorantes Fluorescentes/química , Acetolactato Sintasa/antagonistas & inhibidores , Acetolactato Sintasa/genética , Antibacterianos/farmacología , Inhibidores Enzimáticos/farmacología , Microbioma Gastrointestinal , Resistencia a los Herbicidas/genética , Ensayos Analíticos de Alto Rendimiento , Humanos
10.
Eur J Med Chem ; 167: 472-484, 2019 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-30784880

RESUMEN

Since pyrithiobac (PTB) is a successful commercial herbicide with very low toxicity against mammals, it is worth exploring its derivatives for an extensive study. Herein, a total of 35 novel compounds were chemically synthesized and single crystal of 6-6 was obtained to confirm the molecular structure of this family of compounds. The novel PTB derivatives were fully evaluated against various biological platforms. From the bioassay results, the best AHAS inhibitor 6-22 displayed weaker herbicidal activity but stronger anti-Candida activity than PTB did. For plant pathogenic fungi, 6-26 showed excellent activity at 50 mg/L dosage. Preliminary insecticidal activity and antiviral activity were also observed for some title compounds. Strikingly, 6-5 exhibited a promising inhibitory activity against SARS-CoV Mpro with IC50 of 4.471 µM and a low cellular cytotoxicity against mammalian 293 T cells. Based on the results of molecular modeling, HOMO-1 was considered to be a factor that affects AHAS inhibition and a possible binding mode of 6-5 with SARS-CoV Mpro was predicted. This is the first time that PTB derivatives have been studied as biological agents other than herbicides. The present research hence has suggested that more attentions should be paid to compounds belonging to this family to develop novel agrochemicals or medicines.


Asunto(s)
Benzoatos/síntesis química , Benzoatos/farmacología , Hongos/efectos de los fármacos , Herbicidas/síntesis química , Acetolactato Sintasa/antagonistas & inhibidores , Antivirales/síntesis química , Antivirales/farmacología , Benzoatos/química , Diseño de Fármacos , Herbicidas/farmacología , Herbicidas/uso terapéutico , Modelos Moleculares , Estructura Molecular , Coronavirus Relacionado al Síndrome Respiratorio Agudo Severo/efectos de los fármacos
11.
Eur J Med Chem ; 162: 348-363, 2019 Jan 15.
Artículo en Inglés | MEDLINE | ID: mdl-30448420

RESUMEN

Accetohydroxyacid synthase (AHAS) is the first enzyme involved in the biosynthetic pathway of branched-chain amino acids. Earlier gene mutation of Candida albicans in a mouse model suggested that this enzyme is a promising target of antifungals. Recent studies have demonstrated that some commercial AHAS-inhibiting sulfonylurea herbicides exerted desirable antifungal activity. In this study, we have designed and synthesized 68 novel ethoxysulfulron (ES) derivatives and evaluated their inhibition constants (Ki) against C. albicans AHAS and cell based minimum inhibitory concentration (MIC) values. The target compounds 5-1, 5-10, 5-22, 5-31 and 5-37 displayed stronger AHAS inhibitions than ES did. Compound 5-1 had the best Ki of 6.7 nM against fungal AHAS and MIC values of 2.5 mg/L against Candida albicans and Candica parapsilosis after 72 h. A suitable nematode model was established here and the antifungal activity of 5-1 was further evaluated in vivo. A possible binding mode was simulated via molecular docking and a comparative field analysis (CoMFA) model was constructed to understand the structure-activity relationship. The current study has indicated that some ES derivatives should be considered as promising hits to develop antifungal drugs with novel biological target.


Asunto(s)
Acetolactato Sintasa/antagonistas & inhibidores , Antifúngicos/química , Relación Estructura-Actividad Cuantitativa , Compuestos de Sulfonilurea/farmacología , Animales , Antifúngicos/farmacología , Candida albicans/efectos de los fármacos , Inhibidores Enzimáticos/farmacología , Herbicidas , Ratones , Simulación del Acoplamiento Molecular , Nematodos/efectos de los fármacos , Compuestos de Sulfonilurea/química
12.
Chembiochem ; 19(22): 2387-2394, 2018 11 16.
Artículo en Inglés | MEDLINE | ID: mdl-30225979

RESUMEN

Acetohydroxyacid synthase (AHAS), which catalyzes the first step in the biosynthesis of branched-chain amino acids, is a target of several types of potent herbicides and antimicrobials. AHAS contains the catalytic subunit (CS) and the regulatory subunit (RS). The AHAS RS is usually composed of ACT domains and C-terminal domains. Herein, it is reported that the ACT domain of AHAS RS from different species could efficiently activate its respective CS. Moreover, the universal cross-activation between the CSs and the ACT domains of RSs across species has been discovered. Based on these biochemical and structural analyses, a molecular basis for the universal ACT-triggered CS activation is proposed, which would help to design broad-spectrum herbicides by targeting the interaction interface between CS and ACT from different species.


Asunto(s)
Acetolactato Sintasa/química , Arabidopsis/enzimología , Brassica napus/enzimología , Dominio Catalítico , Escherichia coli/enzimología , Saccharomyces cerevisiae/enzimología , Acetolactato Sintasa/genética , Modelos Moleculares , Unión Proteica
13.
J Agric Food Chem ; 66(15): 3773-3782, 2018 Apr 18.
Artículo en Inglés | MEDLINE | ID: mdl-29618205

RESUMEN

The issue of weed resistance to acetohydroxyacid synthase (EC 2.2.1.6, AHAS) inhibitors has become one of the largest obstacles for the application of this class of herbicides. In a continuing effort to discover novel AHAS inhibitors to overcome weed resistance, a series of pyrimidine-biphenyl hybrids (4aa-bb and 5aa-ah) were designed and synthesized via a scaffold hopping strategy. Among these derivatives, compounds 4aa ( Ki = 0.09 µM) and 4bb ( Ki = 0.02 µM) displayed higher inhibitory activities against Arabidopsis thaliana AHAS than those of the controls bispyribac ( Ki = 0.54 µM) and flumetsulam ( Ki = 0.38 µM). Remarkably, compounds 4aa, 4bb, 5ah, and 5ag exhibited excellent postemergence herbicidal activity and a broad spectrum of weed control at application rates of 37.5-150 g of active ingredient (ai)/ha. Furthermore, 4aa and 4bb showed higher herbicidal activity against AHAS inhibitor-resistant Descurainia sophia, Ammannia arenaria, and the corresponding sensitive weeds than that of bispyribac at 0.94-0.235 g ai/ha. Therefore, the pyrimidine-biphenyl motif and lead compounds 4aa and 4bb have great potential for the discovery of novel AHAS inhibitors to combat AHAS-inhibiting herbicide-resistant weeds.


Asunto(s)
Acetolactato Sintasa/antagonistas & inhibidores , Compuestos de Bifenilo/química , Inhibidores Enzimáticos/química , Herbicidas/química , Proteínas de Plantas/antagonistas & inhibidores , Pirimidinas/química , Acetolactato Sintasa/química , Arabidopsis/efectos de los fármacos , Arabidopsis/enzimología , Compuestos de Bifenilo/síntesis química , Brassicaceae/efectos de los fármacos , Brassicaceae/enzimología , Diseño de Fármacos , Inhibidores Enzimáticos/síntesis química , Inhibidores Enzimáticos/farmacología , Herbicidas/síntesis química , Herbicidas/farmacología , Cinética , Proteínas de Plantas/química , Malezas/efectos de los fármacos , Malezas/enzimología , Relación Estructura-Actividad , Control de Malezas
14.
J Agric Food Chem ; 65(51): 11170-11178, 2017 Dec 27.
Artículo en Inglés | MEDLINE | ID: mdl-29186952

RESUMEN

In the search for new antiresistance acetohydroxyacid synthase (AHAS, EC 2.2.1.6) inhibitors to combat weed resistance associated with AHAS mutations, a series of 2-[(4,6-dimethoxy-1,3,5-triazin-2-yl)oxy]-6-(substituted phenoxy)benzoic acids 11-38 were designed and synthesized via the strategy of conformational flexibility analysis. Compounds 21, 22, 26, 33, 36, and 38 with high potency against both wild-type AtAHAS and its P197L mutant were identified as promising candidates with low resistance factors (RF, defined as the ratio between the ki values toward P197L mutant and wild-type AHAS) ranging from 0.73 to 6.32. Especially, compound 22 (RF = 0.73) was further identified as the most potent antiresistance AHAS inhibitor because of its significantly reduced resistance level compared with that of tribenuron-methyl (RF = 2650) and bispyribac (RF = 4.57). Furthermore, compounds 26, 33, 36, and 38 also displayed promising herbicidal activities against sensitive and resistant (P197L) Descurainia sophia at the dosage of 75-150 g of active ingredient (ai)/ha. Notably, compounds 33 and 38 still maintained over 60% herbicidal activity toward the resistant weed even at much lower dosages (37.5 g ai/ha). Therefore, the designed scaffold has the great potential to discover new candidate compounds for the control of weed resistance associated with AHAS mutation.


Asunto(s)
Acetolactato Sintasa/química , Acetolactato Sintasa/genética , Proteínas de Arabidopsis/química , Proteínas de Arabidopsis/genética , Arabidopsis/enzimología , Benzoatos/química , Inhibidores Enzimáticos/química , Herbicidas/química , Mutación Missense , Acetolactato Sintasa/metabolismo , Arabidopsis/química , Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Cinética , Simulación del Acoplamiento Molecular , Relación Estructura-Actividad
15.
J Agric Food Chem ; 65(26): 5278-5286, 2017 Jul 05.
Artículo en Inglés | MEDLINE | ID: mdl-28616976

RESUMEN

To search for new protoporphyrinogen oxidase (PPO, EC 1.3.3.4) inhibitors with improved bioactivity, a series of novel pyrido[2,3-d]pyrimidine-2,4-dione-benzoxazinone hybrids, 9-13, were designed and synthesized. Several compounds with improved tobacco PPO (mtPPO)-inhibiting and promising herbicidal activities were found. Among them, the most potent compound, 3-(7-fluoro-3-oxo-4-(prop-2-yn-1-yl)-3,4-dihydro-2H-benzo[b][1,4] oxazin-6-yl)-1-methylpyrido[2,3-d]pyrimidine-2,4(1H,3H)-dione, 11q, with a Ki value of 0.0074 µM, showed six times more activity than flumioxazin (Ki = 0.046 µM) against mtPPO. Compound 11q displayed a strong and broad spectrum of weed control at 37.5-150 g of active ingredient (ai)/ha by both post- and pre-emergence application, which was comparable to that of flumioxazin. 11q was safe to maize, soybean, peanut, and cotton at 150 g ai/ha, and selective to rice and wheat at 75 g ai/ha by pre-emergence application, indicating potential applicability in these fields.


Asunto(s)
Inhibidores Enzimáticos/síntesis química , Inhibidores Enzimáticos/farmacología , Herbicidas/síntesis química , Herbicidas/farmacología , Proteínas de Plantas/antagonistas & inhibidores , Protoporfirinógeno-Oxidasa/antagonistas & inhibidores , Pirimidinas/química , Benzoxazinas/química , Inhibidores Enzimáticos/química , Herbicidas/química , Cinética , Proteínas de Plantas/química , Malezas/efectos de los fármacos , Malezas/enzimología , Protoporfirinógeno-Oxidasa/química , Relación Estructura-Actividad , Nicotiana/enzimología
16.
J Agric Food Chem ; 65(28): 5581-5588, 2017 Jul 19.
Artículo en Inglés | MEDLINE | ID: mdl-28654285

RESUMEN

Tuning the binding selectivity through appropriate ways is a primary goal in the design and optimization of a lead toward agrochemical discovery. However, how to achieve rational design of selectivity is still a big challenge. Herein, we developed a novel computational fragment generation and coupling (CFGC) strategy that led to a series of highly potent and bioselective inhibitors targeting protoporphyrinogen IX oxidase. This enzyme plays a vital role in heme and chlorophyll biosynthesis, which has been proven to be associated with many drugs and agrochemicals. However, existing agrochemicals are nonbioselective, resulting in a great threat to nontargeted organisms. To the best of our knowledge, this is the first bioselective inhibitor targeting the tetrapyrrole biosynthesis pathway. In addition, the candidate showed excellent in vivo bioactivity and much better safety toward humans.


Asunto(s)
Inhibidores Enzimáticos/química , Protoporfirinógeno-Oxidasa/antagonistas & inhibidores , Clorofila/metabolismo , Biología Computacional , Hemo/metabolismo , Humanos , Protoporfirinógeno-Oxidasa/química , Protoporfirinógeno-Oxidasa/metabolismo , Nicotiana/química , Nicotiana/enzimología
17.
Pest Manag Sci ; 73(7): 1373-1381, 2017 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-27748000

RESUMEN

BACKGOUND: Acetohydroxyacid synthase (AHAS; EC 2.2.1.6) is the first common enzyme in the biosynthetic pathway leading to the branched-chain amino acids in plants and a wide range of microorganisms. With the long-term and wide application of AHAS inhibitors, weed resistance is becoming a global problem, which leads to an urgent demand for novel inhibitors to antagonize both wild-type and resistant AHAS. RESULTS: Pyrimidinyl salicylic acid derivatives, as one of the main classes of commercial AHAS herbicides, show potential anti-resistant bioactivity to wild-type and P197L mutant. In current work, a series of novel 2-benzoyloxy-6-pyrimidinyl salicylic acid derivatives were designed through fragment-based drug discovery. Fortunately, the newly synthesized compounds showed good inhibitory activity against both wild-type and P197L mutant. Some compounds not only had a lower resistance factor value but also showed excellent inhibitory activity against wild-type AHAS and P197L mutant. Furthermore, greenhouse experiments showed compound 11m displayed almost 100% inhibition against both wild-type and high-resistant Descurainia sophia at a dosage of 150 g a.i. ha-1 . CONCLUSION: The present work indicated that the 2-benzoyloxy-6-pyrimidinyl salicylic acid motif was well worth further optimization. Also, compound 11m could be used as a potential anti-resistant AHAS herbicide, which requires further research. © 2016 Society of Chemical Industry.


Asunto(s)
Acetolactato Sintasa/antagonistas & inhibidores , Brassicaceae/genética , Inhibidores Enzimáticos/química , Resistencia a los Herbicidas , Herbicidas/química , Brassicaceae/enzimología , Biología Computacional , Diseño de Fármacos , Mutación , Relación Estructura-Actividad , Control de Malezas
18.
J Agric Food Chem ; 64(3): 552-62, 2016 Jan 27.
Artículo en Inglés | MEDLINE | ID: mdl-26728549

RESUMEN

Protoporphyrinogen oxidase (PPO, E.C. 1.3.3.4) is known as a key action target for several structurally diverse herbicides. As a continuation of our research work on the development of new PPO-inhibiting herbicides, a series of novel 3-(2'-halo-5'-substituted-benzothiazol-1'-yl)-1-methyl-6-(trifluoromethyl)pyrimidine-2,4-diones 9 were designed and synthesized. The bioassay results indicated that a number of the newly synthesized compounds exhibited higher inhibition activity against tobacco PPO (mtPPO) than the controls, saflufenacil and sulfentrazone. Compound 9F-5 was identified as the most potent inhibitor with a Ki value of 0.0072 µM against mtPPO, showing about 4.2-fold and 1.4-fold higher potency than sulfentrazone (Ki = 0.03 µM) and saflufenacil (Ki = 0.01 µM), respectively. An additional green house assay demonstrated that compound 9F-6 (Ki = 0.012 µM) displayed the most promising postemergence herbicidal activity with a broad spectrum even at a concentration as low as 37.5 g of active ingredient (ai)/ha. Maize exhibits relative tolerance against compound 9F-6 at the dosage of 150 g ai/ha, but it is susceptible to saflufenacil even at 75 g ai/ha. Thus, compound 9F-6 exhibits the potential to be a new herbicide for weed control in maize fields.


Asunto(s)
Inhibidores Enzimáticos/farmacología , Herbicidas/farmacología , Nicotiana/enzimología , Proteínas de Plantas/química , Protoporfirinógeno-Oxidasa/química , Inhibidores Enzimáticos/química , Herbicidas/síntesis química , Herbicidas/química , Cinética , Proteínas de Plantas/metabolismo , Protoporfirinógeno-Oxidasa/metabolismo , Pirimidinonas/química , Pirimidinonas/farmacología , Relación Estructura-Actividad Cuantitativa , Sulfonamidas/química , Sulfonamidas/farmacología , Nicotiana/efectos de los fármacos , Triazoles/química , Triazoles/farmacología
19.
J Agric Food Chem ; 63(14): 3734-41, 2015 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-25804187

RESUMEN

Thaxtomins are a unique family of phytotoxins with unique 4-nitroindole and diketopiperazine fragments possessing potential herbicidal activities. This work presents the total synthesis of natural product thaxtomin C and its analogues. The extensive structure-activity relationship study screens four effective compounds, including thaxtomin A and thaxtomin C. It is indicated that 4-nitro indole fragment is essential for phytotoxicity, while benzyl and m-hydroxybenzyl substituents on the diketopiperazine ring are favorable for the efficacy. The N-methylations on indole and diketopiperazine show weak influence on the herbicidal activities. The four selected compounds show effective herbicidal activities against Brassica campestris, Amaranthus retroflexus, and Abutilon theophrasti, which are comparable or better than dichlobenil, even at a dosage of 187.5 g ha(-1). Moreover, these four compounds show good crop-selective properties to different crops and exhibit moderate protoporphyrinogen oxidase (PPO) enzyme inhibition. The antifungal results indicate that thaxtomin C displays inhibition to a wide range of fungi.


Asunto(s)
Herbicidas/síntesis química , Herbicidas/farmacología , Indoles/síntesis química , Indoles/farmacología , Piperazinas/síntesis química , Piperazinas/farmacología , Malezas/efectos de los fármacos , Herbicidas/química , Indoles/química , Estructura Molecular , Piperazinas/química , Relación Estructura-Actividad , Control de Malezas
20.
Bioorg Med Chem Lett ; 23(13): 3723-7, 2013 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-23726033

RESUMEN

46 Novel nonsymmetrical aromatic disulfides containing [1,3,4]thiadiazole or [1,3,4]oxadiazole groups were synthesized and their biological activities were evaluated as inhibitors of acetohydroxyacid synthase (AHAS, EC 2.2.1.6). Besides their strong in vitro inhibition against plant AHAS, compounds 3e and 3f also display 80-100% post-emergence herbicidal activities in greenhouse bioassay at 1500g /ha dosage. The assay of exogenous branched-chain amino acids supplementation on rape root growth of 3e suggests that the herbicidal activity has relationship with AHAS inhibition.


Asunto(s)
Acetolactato Sintasa/antagonistas & inhibidores , Inhibidores Enzimáticos/farmacología , Hidrocarburos Aromáticos/farmacología , Sulfuros/farmacología , Acetolactato Sintasa/metabolismo , Arabidopsis/enzimología , Relación Dosis-Respuesta a Droga , Inhibidores Enzimáticos/síntesis química , Inhibidores Enzimáticos/química , Hidrocarburos Aromáticos/síntesis química , Hidrocarburos Aromáticos/química , Estructura Molecular , Oxadiazoles/química , Relación Estructura-Actividad , Sulfuros/síntesis química , Sulfuros/química , Tiadiazoles/química
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