Transcriptome analysis of avian livers reveals different molecular changes to three urban pollutants: Soot, artificial light at night and noise.

Identifying key molecular pathways and genes involved in the response to urban pollutants is an important step in furthering our understanding of the impact of urbanisation on wildlife. The expansion of urban habitats and the associated human-introduced environmental changes are considered a global threat to the health and persistence of humans and wildlife. The present study experimentally investigates how short-term exposure to three urban-related pollutants -soot, artificial light at night (ALAN) and traffic noise-affects transcriptome-wide gene expression in livers from captive female zebra finches (Taeniopygia guttata). Compared to unexposed controls, 17, 52, and 28 genes were differentially expressed in soot, ALAN and noise-exposed birds, respectively. In soot-exposed birds, the enriched gene ontology (GO) terms were associated with a suppressed immune system such as interferon regulating genes (IRGs) and responses to external stimuli. For ALAN-exposed birds, enriched GO terms were instead based on downregulated genes associated with detoxification, redox, hormonal-, and metabolic processes. Noise exposure resulted in downregulation of genes associated with the GO terms: cellular responses to substances, catabolic and cytokine responses. Among the individually differentially expressed genes (DEGs), soot led to an increased expression of genes related to tumour progression. Likewise, ALAN revealed an upregulation of multiple genes linked to different cancer types. Both sensory pollutants (ALAN and noise) led to increased expression of genes linked to neuronal function. Interestingly, noise caused upregulation of genes associated with serotonin regulation and function (SLC6A4 and HTR7), which previous studies have shown to be under selection in urban birds. These outcomes indicate that short-term exposure to the three urban pollutants perturbate the liver transcriptome, but most often in different ways, which highlights future studies of multiple-stress exposure and their interactive effects, along with their long-term impacts for urban-dwelling wildlife.

Diesel soot aging in urban plumes within hours under cold dark and humid conditions.

Fresh and aged diesel soot particles have different impacts on climate and human health. While fresh diesel soot particles are highly aspherical and non-hygroscopic, aged particles are spherical and hygroscopic. Aging and its effect on water uptake also controls the dispersion of diesel soot in the atmosphere. Understanding the timescales on which diesel soot ages in the atmosphere is thus important, yet knowledge thereof is lacking. We show that under cold, dark and humid conditions the atmospheric transformation from fresh to aged soot occurs on a timescale of less than five hours. Under dry conditions in the laboratory, diesel soot transformation is much less efficient. While photochemistry drives soot aging, our data show it is not always a limiting factor. Field observations together with aerosol process model simulations show that the rapid ambient diesel soot aging in urban plumes is caused by coupled ammonium nitrate formation and water uptake.

Validation of an air-liquid interface toxicological set-up using Cu, Pd, and Ag well-characterized nanostructured aggregates and spheres.

ABSTRACT: Systems for studying the toxicity of metal aggregates on the airways are normally not suited for evaluating the effects of individual particle characteristics. This study validates a set-up for toxicological studies of metal aggregates using an air-liquid interface approach. The set-up used a spark discharge generator capable of generating aerosol metal aggregate particles and sintered near spheres. The set-up also contained an exposure chamber, The Nano Aerosol Chamber for In Vitro Toxicity (NACIVT). The system facilitates online characterization capabilities of mass mobility, mass concentration, and number size distribution to determine the exposure. By dilution, the desired exposure level was controlled. Primary and cancerous airway cells were exposed to copper (Cu), palladium (Pd), and silver (Ag) aggregates, 50-150 nm in median diameter. The aggregates were composed of primary particles <10 nm in diameter. For Cu and Pd, an exposure of sintered aerosol particles was also produced. The doses of the particles were expressed as particle numbers, masses, and surface areas. For the Cu, Pd, and Ag aerosol particles, a range of mass surface concentrations on the air-liquid interface of 0.4-10.7, 0.9-46.6, and 0.1-1.4 µg/cm2, respectively, were achieved. Viability was measured by WST-1 assay, cytokines (Il-6, Il-8, TNF-a, MCP) by Luminex technology. Statistically significant effects and dose response on cytokine expression were observed for SAEC cells after exposure to Cu, Pd, or Ag particles. Also, a positive dose response was observed for SAEC viability after Cu exposure. For A549 cells, statistically significant effects on viability were observed after exposure to Cu and Pd particles. The set-up produced a stable flow of aerosol particles with an exposure and dose expressed in terms of number, mass, and surface area. Exposure-related effects on the airway cellular models could be asserted.

Evaluation of the injection force dynamics of a modified prefilled insulin pen.

OBJECTIVE: A modified version of the widely used pen FlexPen (FP), called Next Generation FlexPen (NGFP), has been designed to reduce the injection force with this pen. In this study, the injection force of NGFP was compared with another insulin pen, SoloStar (SS). RESEARCH DESIGN/METHODS: The injection force of 24 pens of each type: NGFP fitted with a NovoFine 32G Tip ETW 6 mm needle; SS fitted with a NovoFine 32G Tip needle and SS fitted with a BD Micro-Fine 31G thin wall 5 mm needle, were tested during the delivery of 60 IU insulin at three constant push-button speeds - 4, 6 or 8 mm/s. RESULTS: NGFP had the lowest mean (+/- standard deviation) injection force at all injection speeds (8.3 +/- 0.6, 12.0 +/- 0.9 and 16.2 +/- 1.3 N at 4, 6 and 8 mm/s, respectively)--for SS fitted with a NovoFine 32G Tip needle the corresponding values were 10.2 +/- 1.1, 15.7 +/- 1.5 and 22.3 +/- 1.1 N, and for SS fitted with a BD Micro-Fine 31G needle they were 12.9 +/- 0.8, 20.5 +/- 1.3 and 29.6 +/- 1.9 N. This corresponded to an 18 - 45% lower injection force with NGFP. The time to complete each dose delivery (including the time manufacturers' recommend that the needle is left in situ after delivering the dose) was 14.2, 11.5 and 10.1 s with NGFP at injection speeds of 4, 6 and 8 mm/s, respectively, and were 16.4, 14.3 and 13.2 s with SS, respectively. CONCLUSIONS: This study shows that NGFP has a significantly lower injection force than SS at three specific push-button speeds.

Pi-donation and stabilizing effects of pnicogens in carbenium and silicenium ions: a theoretical study of [C(XH2)3]+ and [Si(XH2)3]+ (X = N, P, As, Sb, Bi).

Quantum chemical calculations at the MP2 and CCSD(T) levels of theory are reported for cations of the general type [A(XH2)3]+ with A = C, Si and X = N, P, As, Sb, Bi. Population analysis, methyl stabilization energies (MSEs), and structural criteria were used to predict the p(pi)-donor ability of and the pi-stabilization energy exerted by this series of pnicogens. All of the substituents XH2 considered in these studies invariably stabilize the triply substituted carbenium as well as the silicenium ions. The calculated data show that the intrinsic p(pi)-donation of the group 15 atoms follows the order N < P < As < Sb < Bi. However, the trend of the stabilization energies is fully reversed. The intrinsic stabilization energies of the planar carbenium ions decrease monotonically from 161.2 kcal mol(-1) for X = NH2 to 98.0 kcal mol(-1) for X = BiH2. The effective stabilization of the pnicogens in the equilibrium structures, which also includes the energy-demanding pyramidalization of the XH2 substituents, follows the same trend, although the absolute numbers are reduced to 145.6 kcalmol(-1) for X = NH2 and 53.2 kcalmol(-1) for X = BiH2. This seemingly contrasting behavior of increasing p(pi) charge donation and decreasing stabilization has already been found for other substituents. Previous studies have shown that carbenium ions substituted by chalcogens up to the fourth row also stabilize C+ less effectively with respect to heavier substituents. Of the ions investigated in this study, only the silicenium ions that are stabilized by pnicogens from the third to the sixth row of the periodic system yield increased stabilizing energies that follow the corresponding intrinsic p(pi)-donor abilities of the respective substituent.

Molecular cloning in Escherichia coli of Erwinia chrysanthemi genes encoding multiple forms of pectate lyase.

The phytopathogenic enterobacterium Erwinia chrysanthemi excretes multiple isozymes of the plant tissue-disintegrating enzyme, pectate lyase (PL). Genes encoding PL were cloned from E. chrysanthemi CUCPB 1237 into Escherichia coli HB101 by inserting Sau3A-generated DNA fragments into the BamHI site of pBR322 and then screening recombinant transformants for the ability to sink into pectate semisolid agar. Restriction mapping of the cloned DNA in eight pectolytic transformants revealed overlapping portions of a 9.8-kilobase region of the E. chrysanthemi genome. Deletion derivatives of these plasmids were used to localize the pectolytic genotype to a 2.5-kilobase region of the cloned DNA. PL gene expression in E. coli was independent of vector promoters, repressed by glucose, and not induced by galacturonan. PL accumulated largely in the periplasmic space of E. coli. An activity stain used in conjunction with ultrathin-layer isoelectric focusing resolved the PL in E. chrysanthemi culture supernatants and shock fluids of E. coli clones into multiple forms. One isozyme with an apparent pI of 7.8 was produced at a far higher level in E. coli and was common to all of the pectolytic clones. Activity staining of renatured PL in sodium dodecyl sulfate-polyacrylamide gels revealed that this isozyme comigrated with the corresponding isozyme produced by E. chrysanthemi. The PL isozyme profiles produced by different clones and deletion derivative subclones suggest that the cloned region contains at least two PL isozyme structural genes. Pectolytic E. coli clones possessed a limited ability to macerate potato tuber tissues.

In vitro susceptibility of spiroplasmas to heavy-metal salts.

The susceptibility of six spiroplasma strains to heavy-metal salt was characterized in terms of minimal inhibitory concentrations and minimal biocidal concentrations in broth tube dilution tests. The strains were most susceptible to mercuric chloride and silver nitrate; less susceptible to copper sulfate, cobalt chloride, lead nitrate, and cadmium sulfate; and least susceptible to nickel chloride and zinc sulfate. Spiroplasma citri strains Maroc R8A2 and C189 were the most susceptible to five of eight heavy-metal salts, and honeybee spiroplasma strain AS576 and Spiroplasma floricola strain 23-6 were generally the least susceptible. The difference between the minimal biocidal concentrations and the minimal inhibitory concentrations was greater for certain heavy-metal salts than for others.

Azo Dye Colony Staining Technique To Detect Fungal Mutants Lacking beta-Glucosidase Activity.

A simple, rapid, convenient, easily interpreted azo dye colony-staining technique was developed to detect fungal mutants lacking beta-glucosidase activity on a 6-bromo-2-naphthyl substrate. The procedure includes net replication of colonies and chemical restriction of colony growth to allow testing of many colonies per culture dish.

Acrolein induces differentiation of infection structures in the wheat stem rust fungus.

A chemical factor from wheat stem rust uredospores that induces infection structure formation has been identified as acrolein (2-propenal). This compound is the active component of distillates from uredospore extracts previously shown to induce infection structure formation.

Contribution of a Cyanide-insensitive Alternate Respiratory System to Increases in Formamide Hydro-lyase Activity and to Growth in Stemphylium loti in Vitro.

Stemphylium loti, a pathogen of a cyanogenic plant, possesses a cyanide-insensitive alternate respiratory pathway. In the absence of cytochrome inhibitors, the alternate system had only a minor role in respiration. When S. loti was grown in medium amended with antimycin to block the cytochrome chain, the alternate system accounted for the total oxygen consumption associated with respiration.The contribution of the alternate respiratory system to increases in formamide hydro-lyase (FHL) activity and to growth in S. loti in vitro was assessed. FHL, induced by cyanide, converts cyanide to nontoxic formamide and is partially responsible for the tolerance of S. loti to high concentrations of cyanide in vitro. When the cytochromes were blocked and the cyanide-insensitive respiratory pathway accounted for 100% of the oxygen uptake associated with respiration, FHL activity, but not changes in dry weight, was positively correlated with activity of the alternate pathway. As the alternate pathway activity decreased with increasing concentrations of salicylhydroxamic acid, the level of FHL activity correspondingly decreased. The alternate respiratory system may provide for increases in FHL activity but not for growth. S. loti appears to have two mechanisms for cyanide tolerance in vitro: cyanide-insensitive respiration and FHL activity. The initial activity of FHL for detoxification of cyanide may depend on the alternate respiratory pathway when the cytochromes of the electron transport chain are blocked.