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1.
Front Microbiol ; 10: 2224, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-31611860

RESUMEN

Deep fractured rock ecosystems across most of North America have not been studied extensively. However, the US Great Basin, in particular the Nevada National Security Site (NNSS, formerly the Nevada Test Site), has hosted a number of influential subsurface investigations over the years. This investigation focuses on resident microbiota recovered from a hydrogeologically confined aquifer in fractured Paleozoic carbonate rocks at 863 - 923 meters below land surface. Analysis of the microorganisms living in this oligotrophic environment provides a perspective into microbial metabolic strategies required to endure prolonged hydrogeological isolation deep underground. Here we present a microbiological and physicochemical characterization of a deep continental carbonate ecosystem and describe a bacterial genus isolated from the ecosystem. Strain DRI-13T is a strictly anaerobic, moderately thermophilic, fumarate-respiring member of the phylum Firmicutes. This bacterium grows optimally at 55°C and pH 8.0, can tolerate a concentration of 100 mM NaCl, and appears to obligately metabolize fumarate to acetate and succinate. Culture-independent 16S rRNA gene sequencing indicates a global subsurface distribution, while the closest cultured relatives of DRI-13T are Pelotomaculum thermopropionicum (90.0% similarity) and Desulfotomaculum gibsoniae (88.0% similarity). The predominant fatty acid profile is iso-C15 : 0, C15 : 0, C16 : 0 and C14 : 0. The percentage of the straight-chain fatty acid C15 : 0 is a defining characteristic not present in the other closely related species. The genome is estimated to be 3,649,665 bp, composed of 87.3% coding regions with an overall average of 45.1% G + C content. Strain DRI-13T represents a novel genus of subsurface bacterium isolated from a previously uncharacterized rock-hosted geothermal habitat. The characterization of the bacterium combined with the sequenced genome provides insights into metabolism strategies of the deep subsurface biosphere. Based on our characterization analysis we propose the name Thermoanaerosceptrum fracticalcis (DRI-13T = DSM 100382T = ATCC TSD-12T).

2.
Ground Water ; 48(3): 442-7, 2010.
Artículo en Inglés | MEDLINE | ID: mdl-20100293

RESUMEN

An integral approach is proposed to quantify uncertainty and sensitivity of advective travel time to the effective porosities of hydrogeologic units (HGUs) along groundwater flow paths. The approach is applicable in situations where a groundwater flow model exists, but a full solute transport model is not available. The approach can be used to: (1) determine HGUs whose porosities are influential to the solute advective travel time; and (2) apportion uncertainties of solute advective travel times to the uncertainty contributions from individual HGU porosities. A simple one-dimensional steady-state flow example is used to illustrate the approach. Advective travel times of solutes are obtained based on the one-dimensional steady-state flow results in conjunction with the HGU porosities. The approach can be easily applicable to more complex multi-dimensional cases where advective solute travel time can be calculated based on simulated flow results from groundwater flow models. This approach is particularly valuable for optimizing limited resources when designing field characterization programs for uncertainty reduction by identifying HGUs that contribute most to the estimation uncertainty of advective travel times of solutes.


Asunto(s)
Movimientos del Agua , Porosidad
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