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1.
Drug Discov Today ; 29(6): 104016, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38719144

RESUMEN

The earliest phases of drug discovery require diverse scientific disciplines to work hand in hand to address many unknowns. Good decision making is crucial for success in this context and, yet, the topic of sound planning has rarely been addressed for the earliest stages of drug discovery. We propose a tailored, qualitative 'decision quality' process that can serve as a guide toward generating project plans optimized to address a given project situation. Furthermore, we propose a visual flow-chart format for the selected plan that includes key decisions and activities, together forming a decision roadmap of the plan. We illustrate each step of the process by means of a real-life example and provide recommendations for its implementation.


Asunto(s)
Toma de Decisiones , Descubrimiento de Drogas , Descubrimiento de Drogas/métodos , Humanos
2.
Biophys J ; 105(10): 2262-72, 2013 Nov 19.
Artículo en Inglés | MEDLINE | ID: mdl-24268138

RESUMEN

HIV Gag polymerizes on the plasma membrane to form virus like particles (VLPs) that have similar diameters to wild-type viruses. We use multicolor, dual-penetration depth, total internal reflection fluorescence microscopy, which corrects for azimuthal movement, to image the assembly of individual VLPs from the time of nucleation to the recruitment of VPS4 (a component of the endosomal sorting complexes required for transport, and which marks the final stage of VLP assembly). Using a mathematical model for assembly and maximum-likelihood comparison of fits both with and without pauses, we detect pauses during Gag polymerization in 60% of VLPs. Pauses range from 2 to 20 min, with an exponentially distributed duration that is independent of cytosolic Gag concentration. VLPs assembled with late domain mutants of Gag (which do not recruit the key endosomal sorting complexes required for transport proteins Alix or TSG101) exhibit similar pause distributions. These pauses indicate that a single rate-limiting event is required for continuation of assembly. We suggest that pauses are either related to incorporation of defects in the hexagonal Gag lattice during VLP assembly or are caused by shortcomings in interactions of Gag with essential and still undefined cellular components during formation of curvature on the plasma membrane.


Asunto(s)
VIH-1/metabolismo , Ensamble de Virus , Membrana Celular/virología , VIH-1/fisiología , Células HeLa , Humanos , Cinética , Microscopía Fluorescente , Multimerización de Proteína , Estructura Cuaternaria de Proteína , Estructura Terciaria de Proteína , Productos del Gen gag del Virus de la Inmunodeficiencia Humana/química , Productos del Gen gag del Virus de la Inmunodeficiencia Humana/metabolismo
3.
Retrovirology ; 10: 104, 2013 Oct 09.
Artículo en Inglés | MEDLINE | ID: mdl-24107264

RESUMEN

BACKGROUND: Retroviruses and many other enveloped viruses usurp the cellular ESCRT pathway to bud from cells. However, the stepwise process of ESCRT-mediated virus budding can be challenging to analyze in retroviruses like HIV-1 that recruit multiple different ESCRT factors to initiate budding. RESULTS: In this study, we characterized the ESCRT factor requirements for budding of Equine Infectious Anemia Virus (EIAV), whose only known direct ESCRT protein interaction is with ALIX. siRNA depletion of endogenous ESCRT proteins and "rescue" experiments with exogenous siRNA-resistant wild type and mutant constructs revealed budding requirements for the following ESCRT proteins: ALIX, CHMP4B, CHMP2A and VPS4A or VPS4B. EIAV budding was inhibited by point mutations that abrogate the direct interactions between ALIX:CHMP4B, CHMP4B:CHMP2A, and CHMP2A:VPS4A/B, indicating that each of these interactions is required for EIAV budding. Unexpectedly, CHMP4B depletion led to formation of multi-lobed and long tubular EIAV virions. CONCLUSIONS: We conclude that EIAV budding requires an ESCRT protein network that comprises EIAV Gag-ALIX-CHMP4B-CHMP2A-VPS4 interactions. Our experiments also suggest that CHMP4B recruitment/polymerization helps control Gag polymerization and/or processing to ensure that ESCRT factor assembly and membrane fission occur at the proper stage of virion assembly. These studies help establish EIAV as a streamlined model system for dissecting the stepwise processes of lentivirus assembly and ESCRT-mediated budding.


Asunto(s)
Complejos de Clasificación Endosomal Requeridos para el Transporte/metabolismo , Interacciones Huésped-Patógeno , Virus de la Anemia Infecciosa Equina/fisiología , Liberación del Virus , Línea Celular , Humanos , Unión Proteica , Mapeo de Interacción de Proteínas
4.
Cell Microbiol ; 15(2): 213-26, 2013 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-23051622

RESUMEN

The endosomal sorting complex required for transport-III (ESCRT-III) proteins are essential for budding of some enveloped viruses, for the formation of intraluminal vesicles at the endosome and for the abscission step of cytokinesis. ESCRT-III proteins form polymers that constrict membrane tubes, leading to fission. We have used electron cryomicroscopy to determine the molecular organization of pleiomorphic ESCRT-III CHMP2A-CHMP3 polymers. The three-dimensional reconstruction at 22 Å resolution reveals a helical organization of filaments of CHMP molecules organized in a head-to-tail fashion. Protease susceptibility experiments indicate that polymerization is achieved via conformational changes that increase the protomer stability. Combinatorial siRNA knockdown experiments indicate that CHMP3 contributes synergistically to HIV-1 budding, and the CHMP3 contribution is ~ 10-fold more pronounced in concert with CHMP2A than with CHMP2B. This is consistent with surface plasmon resonance affinity measurements that suggest sequential CHMP4B-CHMP3-CHMP2A recruitment while showing that both CHMP2A and CHMP2B interact with CHMP4B, in agreement with their redundant functions in HIV-1 budding. Our data thus indicate that the CHMP2A-CHMP3 polymer observed in vitro contributes to HIV-1 budding by assembling on CHMP4B polymers.


Asunto(s)
Complejos de Clasificación Endosomal Requeridos para el Transporte/química , VIH-1/química , Liberación del Virus/fisiología , Microscopía por Crioelectrón , Complejos de Clasificación Endosomal Requeridos para el Transporte/metabolismo , Complejos de Clasificación Endosomal Requeridos para el Transporte/ultraestructura , VIH-1/fisiología , Modelos Moleculares , Péptido Hidrolasas/química , Polimerizacion , Regiones Promotoras Genéticas , Unión Proteica , Multimerización de Proteína , Estructura Secundaria de Proteína , Proteolisis , ARN Interferente Pequeño/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Proteínas Recombinantes/ultraestructura , Resonancia por Plasmón de Superficie
5.
J Mol Biol ; 425(1): 112-23, 2013 Jan 09.
Artículo en Inglés | MEDLINE | ID: mdl-23079241

RESUMEN

The RNA genome of retroviruses is encased within a protein capsid. To gather insight into the assembly and function of this capsid, we used electron cryotomography to image human immunodeficiency virus (HIV) and equine infectious anemia virus (EIAV) particles. While the majority of viral cores appeared closed, a variety of unclosed structures including rolled sheets, extra flaps, and cores with holes in the tip were also seen. Simulations of nonequilibrium growth of elastic sheets recapitulated each of these aberrations and further predicted the occasional presence of seams, for which tentative evidence was also found within the cryotomograms. To test the integrity of viral capsids in vivo, we observed that ~25% of cytoplasmic HIV complexes captured by TRIM5α had holes large enough to allow internal green fluorescent protein (GFP) molecules to escape. Together, these findings suggest that HIV assembly at least sometimes involves the union in space of two edges of a curling sheet and results in a substantial number of unclosed forms.


Asunto(s)
Cápside/química , Proteínas Portadoras/química , VIH-1/química , Virus de la Anemia Infecciosa Equina/química , Animales , Factores de Restricción Antivirales , Simulación por Computador , Microscopía por Crioelectrón , Proteínas Fluorescentes Verdes , Células HEK293 , VIH-1/fisiología , Humanos , Virus de la Anemia Infecciosa Equina/fisiología , Microscopía Fluorescente , Modelos Moleculares , Proteínas de Motivos Tripartitos , Ubiquitina-Proteína Ligasas , Proteínas del Núcleo Viral/química , Ensamble de Virus
6.
Dev Cell ; 23(6): 1247-54, 2012 Dec 11.
Artículo en Inglés | MEDLINE | ID: mdl-23201121

RESUMEN

The diversity of ubiquitin (Ub)-dependent signaling is attributed to the ability of this small protein to form different types of covalently linked polyUb chains and to the existence of Ub binding proteins that interpret this molecular syntax. We used affinity capture/mass spectrometry to identify ALIX, a component of the ESCRT pathway, as a Ub binding protein. We report that the V domain of ALIX binds directly and selectively to K63-linked polyUb chains, exhibiting a strong preference for chains composed of more than three Ub. Sequence analysis identified two potential Ub binding sites on a single α-helical surface within the coiled-coil region of the V domain. Mutation of these putative Ub binding sites inhibited polyUb binding to the isolated V domain in vitro and impaired budding of lentiviruses. These data reveal an important role for K63 polyUb binding by ALIX in retroviral release.


Asunto(s)
Proteínas de Unión al Calcio/metabolismo , Proteínas de Ciclo Celular/metabolismo , Complejos de Clasificación Endosomal Requeridos para el Transporte/metabolismo , VIH-1/fisiología , Virus de la Anemia Infecciosa Equina/fisiología , Retroviridae/fisiología , Ubiquitina/metabolismo , Liberación del Virus , Sitios de Unión/genética , Proteínas de Unión al Calcio/química , Proteínas Portadoras/química , Proteínas Portadoras/metabolismo , Proteínas de Ciclo Celular/química , Línea Celular , Complejos de Clasificación Endosomal Requeridos para el Transporte/química , Células HEK293 , Humanos , Unión Proteica , Dominios y Motivos de Interacción de Proteínas , Estructura Secundaria de Proteína , Transducción de Señal , Ubiquitina/química
7.
Traffic ; 13(3): 468-82, 2012 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-22118530

RESUMEN

The multivesicular body (MVB) pathway delivers membrane proteins to the lumen of the vacuole/lysosome for degradation. The resulting amino acids are transported to the cytoplasm for reuse in protein synthesis. Our study shows that this amino acid recycling system plays an essential role in the adaptation of cells to starvation conditions. Cells respond to amino acid starvation by upregulating both endocytosis and the MVB pathway, thereby providing amino acids through increased protein turnover. Our data suggest that increased Rsp5-dependent ubiquitination of membrane proteins and a drop in Ist1 levels, a negative regulator of endosomal sorting complex required for transport (ESCRT) activity, cause this response. Furthermore, we found that target of rapamycin complex 1 (TORC1) and a second, unknown nutrient-sensing system are responsible for the starvation-induced protein turnover. Together, the data indicate that protein synthesis and turnover are linked by a common regulatory system that ensures adaptation and survival under nutrient-stress conditions.


Asunto(s)
Proteínas de la Membrana/metabolismo , Cuerpos Multivesiculares/metabolismo , Saccharomyces cerevisiae/metabolismo , Aminoácidos/metabolismo , Supervivencia Celular , Péptidos y Proteínas de Señalización Intracelular , Transducción de Señal , Estrés Fisiológico , Regulación hacia Arriba
8.
Cell Host Microbe ; 9(3): 235-242, 2011 Mar 17.
Artículo en Inglés | MEDLINE | ID: mdl-21396898

RESUMEN

Two early-acting components of the cellular ESCRT pathway, ESCRT-I and ALIX, participate directly in HIV-1 budding. The membrane fission activities of ESCRT-III subunits are also presumably required, but humans express 11 different CHMP/ESCRT-III proteins whose functional contributions are not yet clear. We therefore depleted cells of each of the different CHMP proteins and protein families and examined the effects on HIV-1 budding. Virus release was profoundly inhibited by codepletion of either CHMP2 or CHMP4 family members, resulting in ≥100-fold titer reductions. CHMP2A and CHMP4B proteins bound one another, and this interaction was required for budding. By contrast, virus release was reduced only modestly by depletion of CHMP3 and CHMP1 proteins (2- to 8-fold titer reductions) and was unaffected by depletion of other human ESCRT-III proteins. HIV-1 budding therefore requires only a subset of the known human ESCRT-III proteins, with the CHMP2 and CHMP4 families playing key functional roles.


Asunto(s)
Complejos de Clasificación Endosomal Requeridos para el Transporte/metabolismo , Infecciones por VIH/virología , VIH-1/crecimiento & desarrollo , Liberación del Virus , Complejos de Clasificación Endosomal Requeridos para el Transporte/genética , Infecciones por VIH/metabolismo , VIH-1/patogenicidad , Modelos Moleculares , Mutagénesis Sitio-Dirigida , Dominios y Motivos de Interacción de Proteínas , Interferencia de ARN , Proteínas Recombinantes/metabolismo , Técnicas del Sistema de Dos Híbridos , Ensamble de Virus
9.
Proc Natl Acad Sci U S A ; 107(42): 17951-6, 2010 Oct 19.
Artículo en Inglés | MEDLINE | ID: mdl-20880831

RESUMEN

HIV-1 and other enveloped viruses can be restricted by a host cellular protein called BST2/tetherin that prevents release of budded viruses from the cell surface. Mature BST2 contains a small cytosolic region, a predicted transmembrane helix, and an extracellular domain with a C-terminal GPI anchor. To advance understanding of BST2 function, we have determined a 2.6 Å crystal structure of the extracellular domain of the bacterially expressed recombinant human protein, residues 47-152, under reducing conditions. The structure forms a single long helix that associates as a parallel dimeric coiled coil over its C-terminal two-thirds, while the N-terminal third forms an antiparallel four-helix bundle with another dimer, creating a global tetramer. We also report the 3.45 Å resolution structure of BST2(51-151) prepared by expression as a secreted protein in HEK293T cells. This oxidized construct forms a dimer in the crystal that is superimposable with the reduced protein over the C-terminal two-thirds of the molecule, and its N terminus suggests pronounced flexibility. Hydrodynamic data demonstrated that BST2 formed a stable tetramer under reducing conditions and a dimer when oxidized to form disulfide bonds. A mutation that selectively disrupted the tetramer (L70D) increased protein expression modestly but only reduced antiviral activity by approximately threefold. Our data raise the possibility that BST2 may function as a tetramer at some stage, such as during trafficking, and strongly support a model in which the primary functional state of BST2 is a parallel disulfide-bound coiled coil that displays flexibility toward its N terminus.


Asunto(s)
Antígenos CD/metabolismo , Antígenos CD/química , Biopolímeros/química , Cristalografía por Rayos X , Proteínas Ligadas a GPI/química , Proteínas Ligadas a GPI/metabolismo , Humanos , Oxidación-Reducción , Conformación Proteica , Relación Estructura-Actividad
10.
Proc Natl Acad Sci U S A ; 107(29): 12889-94, 2010 Jul 20.
Artículo en Inglés | MEDLINE | ID: mdl-20616062

RESUMEN

The ESCRT pathway helps mediate the final abscission step of cytokinesis in mammals and archaea. In mammals, two early acting proteins of the ESCRT pathway, ALIX and TSG101, are recruited to the midbody through direct interactions with the phosphoprotein CEP55. CEP55 resides at the centrosome through most of the cell cycle but then migrates to the midbody at the start of cytokinesis, suggesting that the ESCRT pathway may also have centrosomal links. Here, we have systematically analyzed the requirements for late-acting mammalian ESCRT-III and VPS4 proteins at different stages of mitosis and cell division. We found that depletion of VPS4A, VPS4B, or any of the 11 different human ESCRT-III (CHMP) proteins inhibited abscission. Remarkably, depletion of individual ESCRT-III and VPS4 proteins also altered centrosome and spindle pole numbers, producing multipolar spindles (most ESCRT-III/VPS4 proteins) or monopolar spindles (CHMP2A or CHMP5) and causing defects in chromosome segregation and nuclear morphology. VPS4 proteins concentrated at spindle poles during mitosis and then at midbodies during cytokinesis, implying that these proteins function directly at both sites. We conclude that ESCRT-III/VPS4 proteins function at centrosomes to help regulate their maintenance or proliferation and then at midbodies during abscission, thereby helping ensure the ordered progression through the different stages of cell division.


Asunto(s)
Adenosina Trifosfatasas/metabolismo , Centrosoma/metabolismo , Complejos de Clasificación Endosomal Requeridos para el Transporte/metabolismo , Huso Acromático/metabolismo , ATPasas Asociadas con Actividades Celulares Diversas , Adenosina Trifosfatasas/deficiencia , Biomarcadores de Tumor/metabolismo , Supervivencia Celular , Citocinesis , ADN/metabolismo , Complejos de Clasificación Endosomal Requeridos para el Transporte/deficiencia , Células HeLa , Humanos , Imagenología Tridimensional , Mitosis , Transporte de Proteínas , Factores de Tiempo , ATPasas de Translocación de Protón Vacuolares
11.
J Virol ; 82(23): 11682-94, 2008 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-18799573

RESUMEN

The rhesus monkey intrinsic immunity factor TRIM5alpha(rh) recognizes incoming capsids from a variety of retroviruses, including human immunodeficiency virus type 1 (HIV-1) and equine infectious anemia virus (EIAV), and inhibits the accumulation of viral reverse transcripts. However, direct interactions between restricting TRIM5alpha proteins and retroviral capsids have not previously been demonstrated using pure recombinant proteins. To facilitate structural and mechanistic studies of retroviral restriction, we have developed methods for expressing and purifying an active chimeric TRIM5alpha(rh) protein containing the RING domain from the related human TRIM21 protein. This recombinant TRIM5-21R protein was expressed in SF-21 insect cells and purified through three chromatographic steps. Two distinct TRIM5-21R species were purified and shown to correspond to monomers and dimers, as analyzed by analytical ultracentrifugation. Chemically cross-linked recombinant TRIM5-21R dimers and mammalian-expressed TRIM5-21R and TRIM5alpha proteins exhibited similar sodium dodecyl sulfate-polyacrylamide gel electrophoresis mobilities, indicating that mammalian TRIM5alpha proteins are predominantly dimeric. Purified TRIM5-21R had ubiquitin ligase activity and could autoubquitylate with different E2 ubiquitin conjugating enzymes in vitro. TRIM5-21R bound directly to synthetic capsids composed of recombinant HIV-1 CA-NC proteins and to authentic EIAV core particles. HIV-1 CA-NC assemblies bound dimeric TRIM5-21R better than either monomeric TRIM5-21R or TRIM5-21R constructs that lacked the SPRY domain or its V1 loop. Thus, our studies indicate that TRIM5alpha proteins are dimeric ubiquitin E3 ligases that recognize retroviral capsids through direct interactions mediated by the SPRY domain and demonstrate that these activities can be recapitulated in vitro using pure recombinant proteins.


Asunto(s)
Proteínas de Unión al ADN/química , VIH-1/fisiología , Proteínas Nucleares/química , Proteínas/química , Proteínas Recombinantes de Fusión/química , Replicación Viral , Cápside/química , Cápside/metabolismo , Proteínas de Unión al ADN/fisiología , Dimerización , Células HeLa , Humanos , Proteínas Nucleares/fisiología , Nucleocápside/metabolismo , Estructura Terciaria de Proteína , Proteínas/fisiología , Proteínas Recombinantes de Fusión/biosíntesis , Proteínas Recombinantes de Fusión/aislamiento & purificación , Ribonucleoproteínas , Ubiquitina/metabolismo , Ubiquitina-Proteína Ligasas/metabolismo
12.
Cell Host Microbe ; 2(1): 41-53, 2007 Jul 12.
Artículo en Inglés | MEDLINE | ID: mdl-18005716

RESUMEN

Human ESCRT-I is a multiprotein complex that plays essential roles in HIV budding and endosomal protein sorting. All ESCRT-I complexes contain three common subunits (TSG101, VPS28, and VPS37), and a fourth subunit of yeast ESCRT-I was recently identified (Mvb12p). We now demonstrate that two related human proteins (MVB12A and MVB12B) constitute the fourth class of metazoan ESCRT-I subunits, despite lacking identifiable sequence homology to Mvb12p. Hydrodynamic studies indicate that soluble human ESCRT-I complexes contain one copy of each of the four subunit types. MVB12 subunits associate with the core region of the binary TSG101-VPS37 complex through conserved C-terminal sequence elements. Both MVB12 depletion and overexpression inhibit HIV-1 infectivity and induce unusual viral assembly defects, including aberrant virion morphologies and altered viral Gag protein processing. Taken together, these studies define the composition of human ESCRT-I complexes and indicate that the MVB12 subunits play a unique role in regulating ESCRT-mediated virus budding.


Asunto(s)
VIH-1/crecimiento & desarrollo , Transporte Biológico , Complejos de Clasificación Endosomal Requeridos para el Transporte , Endosomas/microbiología , Endosomas/fisiología , Humanos , Morfogénesis , Subunidades de Proteína/fisiología , Receptores de Superficie Celular , Proteínas de Saccharomyces cerevisiae/fisiología
13.
Cell Host Microbe ; 2(3): 193-203, 2007 Sep 13.
Artículo en Inglés | MEDLINE | ID: mdl-18005734

RESUMEN

Type 1 interferon (IFN) inhibits the release of HIV-1 virus particles via poorly defined mechanisms. Here, we show that IFNalpha induces retention of viral particles on the surface of fibroblasts, T cells, or primary lymphocytes infected with HIV-1 lacking the Vpu protein. Retained particles are tethered to cell surfaces, can be endocytosed, appear fully assembled, exhibit mature morphology, and can be detached by protease. Strikingly, expression of the HIV-1 Vpu protein attenuates the ability of human cells to adhere to, and thereby retain, nascent HIV-1 particles upon IFNalpha treatment. Vpu also counteracts the IFNalpha-induced retention of virus-like particles assembled from the Ebola virus matrix protein. Furthermore, levels of IFNalpha that suppress replication of Vpu-defective HIV-1 have little effect on wild-type HIV-1. Thus, we propose that HIV-1 expresses Vpu to counteract an IFNalpha-induced, general host defense that inhibits dissemination of enveloped virions from the surface of infected cells.


Asunto(s)
Ebolavirus/crecimiento & desarrollo , VIH-1/crecimiento & desarrollo , Proteínas del Virus de la Inmunodeficiencia Humana/fisiología , Interferón-alfa/antagonistas & inhibidores , Interferón-alfa/inmunología , Proteínas Reguladoras y Accesorias Virales/fisiología , Animales , Línea Celular , Chlorocebus aethiops , Ebolavirus/inmunología , VIH-1/inmunología , Proteínas del Virus de la Inmunodeficiencia Humana/genética , Humanos , Proteínas Reguladoras y Accesorias Virales/genética , Virión/inmunología
14.
EMBO J ; 26(19): 4215-27, 2007 Oct 03.
Artículo en Inglés | MEDLINE | ID: mdl-17853893

RESUMEN

TSG101 and ALIX both function in HIV budding and in vesicle formation at the multivesicular body (MVB), where they interact with other Endosomal Sorting Complex Required for Transport (ESCRT) pathway factors required for release of viruses and vesicles. Proteomic analyses revealed that ALIX and TSG101/ESCRT-I also bind a series of proteins involved in cytokinesis, including CEP55, CD2AP, ROCK1, and IQGAP1. ALIX and TSG101 concentrate at centrosomes and are then recruited to the midbodies of dividing cells through direct interactions between the central CEP55 'hinge' region and GPP-based motifs within TSG101 and ALIX. ESCRT-III and VPS4 proteins are also recruited, indicating that much of the ESCRT pathway localizes to the midbody. Depletion of ALIX and TSG101/ESCRT-I inhibits the abscission step of HeLa cell cytokinesis, as does VPS4 overexpression, confirming a requirement for these proteins in cell division. Furthermore, ALIX point mutants that block CEP55 and CHMP4/ESCRT-III binding also inhibit abscission, indicating that both interactions are essential. These experiments suggest that the ESCRT pathway may be recruited to facilitate analogous membrane fission events during HIV budding, MVB vesicle formation, and the abscission stage of cytokinesis.


Asunto(s)
Proteínas de Unión al Calcio/metabolismo , Proteínas Portadoras/metabolismo , Proteínas de Ciclo Celular/metabolismo , Citocinesis/fisiología , Proteínas de Unión al ADN/metabolismo , Factores de Transcripción/metabolismo , Secuencias de Aminoácidos/fisiología , Animales , Células COS , Proteínas de Unión al Calcio/genética , Proteínas Portadoras/genética , Proteínas de Ciclo Celular/genética , Centrosoma/metabolismo , Chlorocebus aethiops , Proteínas de Unión al ADN/genética , Complejos de Clasificación Endosomal Requeridos para el Transporte , Endosomas/genética , Endosomas/metabolismo , VIH/fisiología , Células HeLa , Humanos , Complejos Multiproteicos/genética , Complejos Multiproteicos/metabolismo , Unión Proteica/fisiología , Estructura Terciaria de Proteína/fisiología , Factores de Transcripción/genética , Ensamble de Virus/fisiología , Internalización del Virus
15.
Traffic ; 8(7): 835-47, 2007 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-17547695

RESUMEN

Retroviral core proteins, Gag and envelope (Env) glycoproteins are expressed from distinct cellular areas and therefore need to encounter to assemble infectious particles. The intrinsic cell localisation properties of either viral component or their capacity to mutually interact determines the assembly of infectious particles. Here, we address how Env determinants and cellular sorting proteins allow the Env derived from gamma retroviruses, murine leukemia virus (MLV) and RD114, to travel to or from late endosomes (LE), which may represent the Env assembly site of retroviruses in some cells. The individual expression of MLV Env resulted in its accumulation in LE in contrast to RD114 Env that required the presence of gamma retroviral Gag proteins. To discriminate between intrinsic intracellular Env localisation and gamma retroviral Gag/Env interactions in influencing Env viral incorporation, we studied Env assembly on heterologous lentiviral particles on which they are passively recruited. We found that an acidic cluster present at the C-terminus of the RD114 Env cytoplasmic tail determines its sub-cellular localisation and retrograde transport. Mutation of this motif induced late endosomal concentration of the RD114 Env, correlating with increased viral incorporation and infectivity. Reciprocally, the reinforcement of a poorly functional acidic motif in the MLV Env resulted in a marked decrease of its late endosomal localisation, leading to weakly infectious lentiviral particles with low Env densities. Finally, through upregulation versus downregulation of its cellular expression, we show that phosphofurin acidic-cluster-sorting protein 1 (PACS-1) controls the function of the RD114 Env acidic cluster, assigning to this cellular effector a crucial role in modulation of Env assembly of some retroviruses.


Asunto(s)
Citoplasma/metabolismo , Retroviridae/metabolismo , Proteínas del Envoltorio Viral/metabolismo , Secuencia de Aminoácidos , Animales , Células COS , Chlorocebus aethiops , Regulación hacia Abajo , Endosomas/metabolismo , Glicoproteínas/metabolismo , Humanos , Microscopía Fluorescente , Datos de Secuencia Molecular , Estructura Terciaria de Proteína , Proteínas de Transporte Vesicular/metabolismo
16.
J Biol Chem ; 281(1): 528-42, 2006 Jan 06.
Artículo en Inglés | MEDLINE | ID: mdl-16195228

RESUMEN

Retroviral Gag and Env glycoproteins (GPs) are expressed from distinct cellular areas and need to encounter to interact and assemble infectious particles. Retroviral particles may also incorporate GPs derived from other enveloped viruses via active or passive mechanisms, a process known as "pseudotyping." To further understand the mechanisms of pseudotyping, we have investigated the capacity of murine leukemia virus (MLV) or lentivirus core particles to recruit GPs derived from different virus families: the G protein of vesicular stomatitis virus (VSV-G), the hemagglutinin from an influenza virus, the E1E2 glycoproteins of hepatitis C virus (HCV-E1E2), and the retroviral Env glycoproteins of MLV and RD114 cat endogenous virus. The parameters that influenced the incorporation of viral GPs onto retroviral core particles were (i) the intrinsic cell localization properties of both viral GP and retroviral core proteins, (ii) the ability of the viral GP to interact with the retroviral core, and (iii) the expression of the lentiviral Nef protein. Whereas the hemagglutinin and VSV-G glycoproteins were recruited by MLV and lentivirus core proteins at the cell surface, the HCV and MLV GPs were most likely recruited in late endosomes. In addition, whereas these glycoproteins could be passively incorporated on either retrovirus type, the MLV GP was also actively recruited by MLV core proteins, which, through interactions with the cytoplasmic tail of the latter GP, induced its localization to late endosomal vesicles. Finally, the expression of Nef proteins specifically enhanced the incorporation of the retroviral GPs by increasing their localization in late endosomes.


Asunto(s)
Productos del Gen gag/metabolismo , Productos del Gen nef/metabolismo , Virus de la Leucemia Murina/fisiología , Infecciones por Retroviridae/virología , Infecciones Tumorales por Virus/virología , Animales , Células COS , Carcinoma Hepatocelular , Línea Celular Tumoral , Membrana Celular/virología , Chlorocebus aethiops , Endosomas/virología , Productos del Gen env/metabolismo , Hemaglutininas/metabolismo , Humanos , Riñón/citología , Lentivirus/crecimiento & desarrollo , Lentivirus/fisiología , Infecciones por Lentivirus/metabolismo , Infecciones por Lentivirus/virología , Virus de la Leucemia Murina/crecimiento & desarrollo , Neoplasias Hepáticas , Glicoproteínas de Membrana/metabolismo , Infecciones por Retroviridae/metabolismo , Rabdomiosarcoma , Infecciones Tumorales por Virus/metabolismo , Proteínas del Envoltorio Viral/metabolismo
17.
J Gen Virol ; 86(Pt 12): 3189-3199, 2005 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-16298963

RESUMEN

Hepatitis C virus (HCV) E1 and E2 envelope glycoproteins (GPs) displayed on retroviral cores (HCVpp) are a powerful and highly versatile model system to investigate wild-type HCV entry. To further characterize this model system, the cellular site of HCVpp assembly and the respective roles of the HCV GPs in this process were investigated. By using a combination of biochemical methods with confocal and electron microscopic techniques, it was shown that, in cells producing HCVpp, both E1 and E2 colocalized with retroviral core proteins intracellularly, presumably in multivesicular bodies, but not at the cell surface. When E1 and E2 were expressed individually with retroviral core proteins, only E2 colocalized with and was incorporated on retroviral cores. Conversely, the colocalization of E1 with retroviral core proteins and its efficient incorporation occurred only upon co-expression of E2. Moreover, HCVpp infectivity correlated strictly with the presence of both E1 and E2 on retroviral cores. Altogether, these results confirm that the E1E2 heterodimer constitutes the prebudding form of functional HCV GPs and, more specifically, show that dimerization with E2 is a prerequisite for efficient E1 incorporation onto particles.


Asunto(s)
Hepacivirus/fisiología , Proteínas del Envoltorio Viral/metabolismo , Ensamble de Virus , Animales , Línea Celular , Membrana Celular/química , Chlorocebus aethiops , Citoplasma/química , Humanos , Microscopía Confocal , Microscopía Electrónica
18.
J Virol ; 78(13): 7153-64, 2004 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-15194792

RESUMEN

Glycoproteins derived from most retroviruses and from several families of enveloped viruses can form infectious pseudotypes with murine leukemia virus (MLV) and lentiviral core particles, like the MLV envelope glycoproteins (Env) that are incorporated on either virus type. However, coexpression of a given glycoprotein with heterologous core proteins does not always give rise to highly infectious viral particles, and restrictions on pseudotype formation have been reported. To understand the mechanisms that control the recruitment of viral surface glycoproteins on lentiviral and retroviral cores, we exploited the fact that the feline endogenous retrovirus RD114 glycoprotein does not efficiently pseudotype lentiviral cores derived from simian immunodeficiency virus, whereas it is readily incorporated onto MLV particles. Our results indicate that recruitment of glycoproteins by the MLV and lentiviral core proteins occurs in intracellular compartments and not at the cell surface. We found that Env and core protein colocalization in intracytoplasmic vesicles is required for pseudotype formation. By investigating MLV/RD114 Env chimeras, we show that signals in the cytoplasmic tail of either glycoprotein differentially influenced their intracellular localization; that of MLV allows endosomal localization and hence recruitment by both lentiviral and MLV cores. Furthermore, we found that upon membrane binding, MLV core proteins could relocalize Env glycoproteins in late endosomes and allow their incorporation on viral particles. Thus, intracellular colocalization, as well as interactions between Env and core proteins, may influence the recruitment of the glycoprotein onto viral particles and generate infectious pseudotyped viruses.


Asunto(s)
Retrovirus Endógenos/genética , Endosomas/metabolismo , Regulación Viral de la Expresión Génica , Productos del Gen env/metabolismo , Productos del Gen gag/metabolismo , Virus de la Leucemia Murina/genética , Animales , Células COS , Gatos , Línea Celular , Retrovirus Endógenos/metabolismo , Retrovirus Endógenos/patogenicidad , Productos del Gen env/genética , Productos del Gen gag/genética , Vectores Genéticos , Humanos , Virus de la Leucemia Murina/metabolismo , Virus de la Leucemia Murina/patogenicidad , Microscopía Confocal , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Virus de la Inmunodeficiencia de los Simios/genética , Virus de la Inmunodeficiencia de los Simios/metabolismo , Virión/metabolismo , Ensamble de Virus
19.
RNA ; 10(3): 504-15, 2004 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-14970395

RESUMEN

The genomic RNA of the gypsy retroelement from Drosophila melanogaster exhibits features similar to other retroviral RNAs because its 5' untranslated (5' UTR) region is unusually long (846 nucleotides) and potentially highly structured. Our initial aim was to search for an internal ribosome entry site (IRES) element in the 5' UTR of the gypsy genomic RNA by using various monocistronic and bicistronic RNAs in the rabbit reticulocyte lysate (RRL) system and in cultured cells. Results reported here show that two functionally distinct and independent RNA domains control the production of gypsy encoded proteins. The first domain corresponds to the 5' UTR of the env subgenomic RNA and exhibits features of an efficient IRES (IRES(E)) both in the reticulocyte lysate and in cells. The second RNA domain that encompasses the gypsy insulator can function as an IRES in the rabbit reticulocyte lysate but strongly represses translation in cultured cells. Taken together, these results suggest that expression of the gypsy encoded proteins from the genomic and subgenomic RNAs can be regulated at the level of translation.


Asunto(s)
Drosophila/genética , Biosíntesis de Proteínas/fisiología , ARN , Retroelementos/fisiología , Regiones no Traducidas 5' , Animales , Sitios de Unión , Drosophila/metabolismo , Endopeptidasas/metabolismo , Factor 4G Eucariótico de Iniciación/metabolismo , Genes Reporteros , Conejos , Reticulocitos/metabolismo , Ribosomas/metabolismo , Análisis de Secuencia de ARN
20.
Mol Ther ; 6(4): 446-54, 2002 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-12377185

RESUMEN

The purpose of our study was to evaluate lentiviral vector-mediated rat retinal transduction using simian immunodeficiency virus (SIV) pseudotyped with envelope proteins from vesicular stomatitis virus G glycoprotein (VSV-G), Mokola virus G protein (MK-G), amphotropic murine leukemia virus envelope (4070A-Env), influenza A virus hemagglutinin (HA), lymphocytic choriomeningitis virus G protein (LCMV-G), and RD114 retrovirus envelope (RD114-Env). The six pseudotyped lentivirus vectors carried CMV-driven green fluorescent protein (GFP) or beta-galactosidase (beta-gal) reporter genes. Intravitreal and subretinal injections of each pseudotyped recombinant SIV were performed in cohorts of Wistar rats. Our results showed that no transgene expression was detected after intravitreal injection of each pseudotyped SIV vector. Also, no transduction could be detected following subretinal injection of RD114 pseudotyped SIV vectors. However, selective transduction of retinal pigment epithelium (RPE) cells was repeatedly obtained after subretinal delivery of VSV-G, MK-G, 4070A-Env, HA, and LCMV-G pseudotyped SIV. GFP expression was maximum as soon as 4 days postadministration for VSV-G, MK-G, 4070A-Env, and HA pseudotypes, with no evidence of pseudotransduction for VSV-G. Maximum transgene expression was observed 3 weeks postinjection for LCMV-6. Importantly, HA and VSV-G pseudotyped SIV lead to such a high level of transgene expression that GFP-related toxicity occurred. Therefore, when a high level of GFP synthesis is achieved, replacement of enhanced GFP (egfp, Aequorea victoria) by a low-toxicity GFP (Renilla reniformis) cDNA is necessary to allow long-term expression.


Asunto(s)
Vectores Genéticos , Epitelio Pigmentado Ocular/metabolismo , Virus de la Inmunodeficiencia de los Simios/genética , Transducción Genética , Animales , Vectores Genéticos/administración & dosificación , Ratas , Recombinación Genética
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