Environmental DNA-based profiling of benthic bacterial and eukaryote communities along a crude oil spill gradient in a coral reef in the Persian Gulf.

Coral reef ecosystems in the Persian Gulf are frequently exposed to crude oil spills. We investigated benthic bacterial and eukaryote community structures at such coral reef sites subjected to different degrees of polycyclic aromatic hydrocarbon (PAH) pollution using environmental DNA (eDNA) metabarcoding. Both bacterial and eukaryote communities responded with pronounced shifts to crude oil pollution and distinguished control sites, moderately and heavily impacted sites with significant confidentiality. The observed community patterns were predominantly driven by Alphaproteobacteria and metazoans. Among these, we identified individual genera that were previously linked to oil spill stress, but also taxa, for which a link to hydrocarbon still remains to be established. Considering the lack of an early-warning system for the environmental status of coral reef ecosystems exposed to frequent crude-oil spills, our results encourage further research towards the development of an eDNA-based biomonitoring tool that exploits benthic bacterial and eukaryote communities as bioindicators.

Identification of immunodominant epitopes on nucleocapsid and spike proteins of the SARS-CoV-2 in Iranian COVID-19 patients.

Given the emergence of SARS-CoV-2 virus as a life-threatening pandemic, identification of immunodominant epitopes of the viral structural proteins, particularly the nucleocapsid (NP) protein and receptor-binding domain (RBD) of spike protein, is important to determine targets for immunotherapy and diagnosis. In this study, epitope screening was performed using a panel of overlapping peptides spanning the entire sequences of the RBD and NP proteins of SARS-CoV-2 in the sera from 66 COVID-19 patients and 23 healthy subjects by enzyme-linked immunosorbent assay (ELISA). Our results showed that while reactivity of patients' sera with reduced recombinant RBD protein was significantly lower than the native form of RBD (P < 0.001), no significant differences were observed for reactivity of patients' sera with reduced and non-reduced NP protein. Pepscan analysis revealed weak to moderate reactivity towards different RBD peptide pools, which was more focused on peptides encompassing amino acids (aa) 181-223 of RBD. NP peptides, however, displayed strong reactivity with a single peptide covering aa 151-170. These findings were confirmed by peptide depletion experiments using both ELISA and western blotting. Altogether, our data suggest involvement of mostly conformational disulfide bond-dependent immunodominant epitopes in RBD-specific antibody response, while the IgG response to NP is dominated by linear epitopes. Identification of dominant immunogenic epitopes in NP and RBD of SARS-CoV-2 could provide important information for the development of passive and active immunotherapy as well as diagnostic tools for the control of COVID-19 infection.

2, 3, 7, 8-Tetrachlorodibenzo-p-dioxin potential impacts on peripheral blood mononuclear cells of endometriosis women.

Endometriosis happens following the implantation of endometrial-derived tissues outside the uterine cavity. It has been suggested that 2, 3, 7, 8-Tetrachlorodibenzo-p-dioxin (TCDD) is involved in endometriosis development. Furthermore, aryl hydrocarbon receptor (AHR), as a TCDD receptor, has been demonstrated to regulate immune responses. Nonetheless, data regarding the mechanisms, through which TCDD influences the immune system in endometriosis, are still inconclusive. Therefore, frequency of regulatory T cells (Tregs) and the expression of FOXP3, AHR and indoleamine 2, 3-dioxygenase 1 (IDO1) from endometriosis and non-endometriosis individuals were investigated in the absence and presence of TCDD; also, the concentration of IL-6 and kynurenine in the supernatant of cultures was assessed. The impact of TCDD-treated PBMCs on the migration capacity of menstrual blood-derived stromal stem cells (MenSCs) and monocyte chemoattractant protein-1 (MCP-1) and IL-6 production was determined. Here, we found that AHR and IDO1 expression levels were lower in endometriosis PBMCs; however, TCDD treatment increased AHR, FOXP3, IDO1, IL-6, and Treg levels in the endometriosis group (P ≤ 0.05-0.0001). TCDD-treated PBMCs increased the migration capacity of MenSCs and up-regulated MCP-1 and IL-6 levels in the PBMCs/MenSCs co-culture (P ≤ 0.01-0.0001). In conclusion, these results shed light on the probable mechanisms, through which AHR activation by chemical toxicants can impact inflammatory immune mediators involved in the development of endometriosis; also, these data support the idea that TCDD could promote endometriosis progression.

Endometrial mesenchymal stem/stromal cells: The Enigma to code messages for generation of functionally active regulatory T cells.

BACKGROUND: Regulatory T cells (Tregs) play an important role in fine-tuning of immune responses and are pivotal for a successful pregnancy. Recently, the importance of mesenchymal stem cells in regulation of immune responses in general and Tregs in particular has been highlighted. Here, we hypothesized that menstrual stromal/stem cells (MenSCs) contribute to uterine immune system regulation through induction of functionally active Tregs. METHODS: MenSCs were collected from 18 apparently healthy women and characterized. Bone marrow mesenchymal stem cells (BMSCs) served as a control. The effect of MenSCs on proliferation of anti-CD3/CD28-stimulated T CD4 + cells and generation of Tregs with or without pre-treatment with mitomycin C, IFN-γ and IL-1ß was evaluated by flow cytometry. The potential role of IDO, PGE2, IL-6, IL-10, and TGF-ß on proliferation of T CD4 + cells and generation of Tregs was assessed using blocking antibodies or agents. IDO activity was evaluated in MenSCs and BMSCs culture supernatants by a colorimetric assay. IL-10 and IFN-γ production in MenSCs-primed T CD4 + was measured using intracellular staining. To investigate the functional properties of Tregs induced by MenSCs, Treg cells were isolated and their functional property to inhibit proliferation of anti-CD3/CD28-stimulated PBMCs was assessed by flow cytometry. RESULTS: According to the results, proliferation of T CD4 + lymphocytes was enhanced in the presence of MenSCs, while pre-treatment of MenSCs with pro-inflammatory cytokines reversed this effect. PGE2 and IDO were the major players in MenSCs-induced T cell proliferation. Non-treated MenSCs decreased the frequency of Tregs, whereas after pre-treatment with IFN-γ and IL-1ß, they induced functional Tregs with ability to inhibit the proliferation of anti-CD3/CD28-stimulated PBMCs. This effect was mediated through IL-6, IL-10, TGF-ß and IDO. IFN-γ/IL-1ß-treated MenSCs induced IL-10 and IFN-γ production in CD4 + T cells. CONCLUSION: Collectively, these findings indicate that immunomodulatory impact of menstrual blood stem cells (MenSCs) on generation of Tregs and inhibition of T cells proliferation is largely dependent on pre-treatment with IFN-γ and IL-1ß. This is the first report on immunomodulatory impact of MenSCs on Tregs and highlights the pivotal role of endometrial stem cells in regulation of local endometrial immune responses.

Trace metal content in annually banded scleractinian coral 'Porites lobata' across the northern Persian Gulf.

Concentrations of trace metals in skeleton growth bands of dominant scleractinian coral 'Porites lobata' in different years were investigated in Kharg and Hebourabi islands in the northern coast of the Persian Gulf. The highest average concentrations of metals respectively were Sr> Mg> Zn> Ba> Cu> U> Ni> Mn> Cr> Co> Pb> V> Cd in Kharg and Sr> Mg> Ba> Cu> U> Ni> Zn> Mn> Cr> Co> V> Pb> Cd in Hendourabi. The coefficient of variation percentages (CV%) of Cr, Mn, Zn, Ba, and Pb in Kharg and Cu and Ba in Hendourabi were more than 50%. Results of PCA analyses revealed that the levels of trace metals in Kharg were defined by three principle components: the first component (Mn, V, Pb, Zn, Ni and half of Mg, Cr and Co) corresponding to the past regional military conflicts and oil pollution, the second component (Sr, U, and Mg) corresponding to sea surface temperature (SST) changes, and the third component (Cr and Co) corresponding to other factors. The results of PCA analyses revealed that trace metals in Hendourabi were defined by two principle components including the first component (Co, Ni, Cr, Mn, and half of Ba) corresponding to annual precipitation changes and the second component (U, Zn, and Ba) corresponding to coastal constructions. The results showed that trace metal contamination in Kharg is higher than those of Hendourabi as a result of the oil exploration-related activities and war.

MenSCs exert a supportive role in establishing a pregnancy-friendly microenvironment by inhibiting TH17 polarization.

OBJECTIVES: Uncontrolled TH17 differentiation has been suggested to play a role in the pathogenesis of pregnancy loss. We recently showed that menstrual blood stromal/stem cells (MenSCs) alter functional features of natural killer cells. Here, we hypothesized that MenSCs could modulate differentiation of TH17 cells. METHOD: MenSCs were collected from 18 apparently healthy women and characterized. Bone marrow mesenchymal stem cells (BMSCs) served as a control. TH17 polarization and proliferation of purified T CD4+ cells were assessed by flow cytometry in a well-defined co-culture system containing T CD4+ cells and MenSCs or BMSCs. Indoleamine 2,3-Dioxygenase (IDO) activity was evaluated in MenSC and BMSC culture supernatants by a colorimetric assay. The impact of MenSCs on expression of transcription factors, RORC, T-bet, Gata3, NRP-1 and Helios were studied by qPCR. RESULTS: MenSCs significantly inhibited TH17 differentiation (p = 0.0383) and percentage of the cells co-expressing IL-17 and IFN-γ (p = 0.0023). PGE2 blockade significantly reduced percentage and proliferation of T CD4+IL-17+ (p = 0.003, p = 0.0018), T CD4+ IFN-γ+ (p = 0.002, p = 0.0022) and T CD4+IL-17+ IFN-γ+ (p = 0.004, p = 0.02) cells. MenSCs produced a considerable activity of IDO (p = 0.0002), induced a significant rise in the Treg frequency (p = 0.0091) and a sharp increase in TH17/Tregs ratio (p = 0.0022). MenSCs increased expression of NRP1 (p = 0.001), while downregulated expression of RORC in T cells (p = 0.001). CONCLUSION: Our results suggest a supportive role for MenSCs in establishing a pregnancy-friendly microenvironment in the uterus and put forth the idea that inherent abnormalities of MenSCs may be a basis for dysregulated endometrial immune network leading to pregnancy loss.

Multiple benthic indicators are efficient for health assessment of coral reefs subjected to petroleum hydrocarbons contamination: A case study in the Persian Gulf.

The ever-increasing anthropogenic activities have adversely impacted coral reef ecosystems and their ecological functions. This calls for an urgent assessment of the health state of these valuable ecosystems to justify the need for mitigation and proper management efforts. In this contribution, we used multiple indicators to assess the impact of intense oil-related activities on coral reefs in two near-by impacted and non-impacted islands in the northwestern Persian Gulf. The efficacy of indices was assessed using estimations of the effect size (omega-squared), precision, and decision trees (Classification and Regression Tree (CART)). The results demonstrated that the combination of bioaccumulation of Æ©PAH in coral tissues, the percent of live coral cover, and the Sediment Constituent (SEDCON) Index were the most robust proxies reflecting the influence of human activities on reef's health. Based on sedimentary PAH concentration, the CART classified most of the indicators into two classes consisting of those in impacted and those in non-impacted locations, further supporting the feasibility of the employed indices. The findings of this study provided a warning of degradation in coral reefs of the island subjected to PAH pollution. This encourages decision-makers to execute routine monitoring and mitigation practices to maintain healthy reefs in the study areas.

Discovery of a potential biomarker for immunotherapy of melanoma: PLAC1 as an emerging target.

BACKGROUND: Melanoma has increased in incidence worldwide prompting investigators to search for new biomarkers for targeted immunotherapy of this disease. Placenta specific 1 (PLAC1) is a new member of cancer-testis antigens with widespread expression in many types of cancer. Here, we aimed to study for the first time the expression pattern of PLAC1 in skin cancer samples including cutaneous melanoma, basal cell carcinoma (BCC), squamous cell carcinoma (SCC) in comparison to normal skin and nevus tissues and potential therapeutic effect of anti-PLAC1 antibody in melanoma cancer cell lines in vitro. MATERIALS AND METHODS: Polyclonal and monoclonal antibodies were applied for immunohistochemical profiling of PLAC1 expression using tissue microarray. The cytotoxic action of anti-PLAC1 antibody alone or as an antibody drug conjugate (with anti-neoplastic agent SN38) was investigated in melanoma cell lines. RESULTS: We observed that 100% (39 of 39) of melanoma tissues highly expressed PLAC1 with both cytoplasmic and surface expression pattern. Investigation of PLAC1 expression in BCC (n = 110) samples showed negative results. Cancer cells in SCC samples (n = 66) showed very weak staining. Normal skin tissues and nevus samples including congenital melanocytic nevus failed to express PLAC1. Anti-PLAC1-SN38 exerted a specific pattern of cytotoxicity in a dose- and time-dependent manner in melanoma cells expressing surface PLAC1. CONCLUSIONS: Our findings re-inforce the concept of re-expression of embryonic/placental tissue antigens in cancer and highlight the possibility of melanoma targeted therapy by employing anti-PLAC1 antibodies. The data presented here should lead to the future research on targeted immunotherapy of patients with melanoma.

IL-27 impact on NK cells activity: Implication for a robust anti-tumor response in chronic lymphocytic leukemia.

Interleukin 27 (IL-27) belongs to IL-12 cytokine family, has shown anti-tumor potential in several solid tumors, as well as hematologic malignancies. IL-27 can inhibit tumor growth and progression through direct and indirect mechanisms, such as inhibition of proliferation, angiogenesis, induction of apoptosis in tumor cells, and anti-tumor immune response. B-CLL is characterized by remarkable immune perturbation, which leads to disease complications and reduced effectiveness of the treatment. Natural killer cells (NK) are considered as an important arm for the elimination of transformed cells. However, NK cells have shown significant impairment in patients with CLL. Here we analyzed the activity of recombinant human (rh) IL-27-stimulated NK cells in bone marrow (BM) and peripheral blood (PB) of CLL patients using cell surface flow cytometry assessment, and cytotoxicity assay. We showed that rhIL-27 can increase CD69 on NK cells both in BM and PB. Interestingly, BM-NK cells treated with rhIL-27 exhibited a significant increase in degranulation and NK cell-mediated cytotoxicity as compared with untreated NK cells, whereas it did not improve NK cell activity of PB. These observations added further explanation to the anti-tumor activity of IL-27 and also could pave the way to adoption immunostimulatory adjuvant for therapies in CLL.

Inhibitory Effect of Polyclonal Antibodies Against HER3 Extracellular Subdomains on Breast Cancer Cell Lines.

OBJECTIVE: Human epidermal growth factor receptor 3 (HER3) is a unique member of the tyrosine kinase receptors with an inactive kinase domain and is the preferable dimerization partner for HER2 which lead to potent tumorigenic signaling. METHODS: In this study, the expression plasmids coding for the human HER3 subdomains were transfected into CHO-K1 cells. Produced proteins were characterized by ELISA and SDS-PAGE. Rabbits were immunized and produced polyclonal antibodies (pAbs) that were characterized by ELISA, Immunoblotting and flowcytometry and their inhibitory effects were assessed by XTT on BT-474 and JIMT-1 breast cancer cell lines. RESULT: The recombinant subdomains were highly immunogenic in rabbits. The pAbs reacted with the recombinant subdomains as well as commercial HER3 and the native receptor on tumor cell membranes and could significantly inhibit growth of Trastuzumab sensitive (BT-474) and resistant (JIMT-1) breast cancer cell lines in vitro. CONCLUSION: It seems that HER3 extra cellular domains (ECD) induce a strong anti-tumor antibody response and may prove to be potentially useful for immunotherapeutic applications.
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Impact of warming on biofouling communities in the northern Persian Gulf.

While the impact of ocean warming on single species is well described, the impact on marine biofouling communities is not well understood. Effluents of power plants have higher temperatures and can be used as natural large-scale test sites to investigate warming effects on marine ecosystems. In the present study, we evaluated the impact of elevated temperatures in the vicinity of a power plant on macro-biofouling communities in the northern coast of the Persian Gulf. The impact site was on average 2 °C warmer than the control site. Our results demonstrate a significantly different structure and composition of biofouling communities between control and impact sites. Warming led to a 1.5-fold increase in the mean coverage of biofouling communities and slightly decreased functional and species richness. Our results indicated that future warming will likely increase biofouling pressure, while decreasing diversity of communities, particularly in habitats where organisms exist at their upper tolerance limits of temperature.

Human menstrual blood-derived stromal/stem cells modulate functional features of natural killer cells.

Although natural killer (NK) cells play a crucial role in the maintenance of a successful pregnancy, their cytotoxic activity should be tightly controlled. We hypothesized that endometrial mesenchymal stromal/stem cells (eMSCs) could potentially attenuate the functional features of NK cells. Herein, we assessed immunomodulatory effects of menstrual blood-derived stromal/stem cells (MenSCs), as a surrogate for eMSCs, on NK cells function. Our results showed that MenSCs induced proliferation of NK cells. However, IFN-γ/IL-1ß pretreated MenSCs significantly inhibited NK cell proliferation. Of 41 growth factors tested, MenSCs produced lower levels of insulin-like growth factor binding proteins (IGFBPs) 1-4, VEGF-A, ß-NGF, and M-CSF compared to bone marrow-derived mesenchymal stem cells (BMSCs). MenSCs displayed high activity of IDO upon IFN-γ treatment. The antiproliferative potential of IFN-γ/IL-1ß-pretreated MenSCs was mediated through IL-6 and TGF-ß. MenSCs impaired the cytotoxic activity of NK cells on K562 cells, consistent with the lower expression of perforin, granzymes A, and B. We also observed that in vitro decidualization of MenSCs in the presence of IFN-γ reduced the inhibitory effect of MenSCs on NK cell cytotoxicity against K562 target cells. Additionally, MenSCs were found to be prone to NK cell-mediated lysis in an MHC-independent manner. Our findings imply that dysregulation of NK cells in such pregnancy-related disorders as miscarriage may stem from dysfunctioning of eMSCs.

The response of benthic foraminifera to aquaculture and industrial pollution: A case study from the Northern Persian Gulf.

The aquaculture and industrial sewage impacts on benthic foraminifera investigated at two reefs across the northern Persian Gulf. The foraminifera assemblages at a single sewaged reef were compared with two non-sewaged reefs. A low-diversity assemblage, dominated by stress-tolerant species Quinqueloculina sp. and larger symbiont-bearing Amphistegina sp., was characteristic of the industrial sewaged reef. The opportunistic species Ammonia sp. and Elphidium sp. were common in aquaculture sewaged reef. The density of foraminifera in sewaged reefs was lower than non-sewaged reefs. The lower diversity was only detected in the industrial sewaged reef. Assemblage structure was significantly different between sewaged and non-sewaged reefs. The industrial sewaged reef displayed high FORAM Index values (>4.0), reflecting favorable environments for supporting relatively healthy reefs. FORAM Index in aquaculture sewaged reef ranged from 2.0 to 4.0 indicated that the water with organic pollution may support living coral community, but any damage would not be followed by recovery.

Menstrual Blood-Derived Stromal Stem Cells Augment CD4+ T Cells Proliferation.

BACKGROUND: It is more than sixty years that the concept of the fetal allograft and immunological paradox of pregnancy was proposed and in this context, several regulatory networks and mechanisms have been introduced so far. It is now generally recognized that mesenchymal stem cells exert potent immunoregulatory activity. In this study, for the first time, the potential impact of Menstrual blood Stem Cells (MenSCs), as surrogate for endometrial stem cells, on proliferative capacity of CD4+ T cells was tested. METHODS: MenSCs and Bone marrow Mesenchymal Stem Cells (BMSCs) were isolated and assessed for their immunophenotypic features and multi-lineage differentiation capability. BMSCs and MenSCs with or without IFNγ pre-stimulation were co-cultured with purified anti-CD3/CD28-activated CD4+ T cells and the extent of T cell proliferation at different MenSCs: T cell ratios were investigated by CSFE flow cytometry. IDO activity of both cell types was measured after stimulation with IFNγ by a colorimetric assay. RESULTS: MenSCs exhibited dual mesenchymal and embryonic markers and multi-lineage differentiation capacity. MenSCs significantly increased proliferation of CD4+ cells at ratios 1:2, 1:4 and 1:8. IFNγ pre-treated BMSCs but not MenSCs significantly suppressed CD4+ T cells proliferation. Such proliferation promoting capacity of MenSCs was not correlated with IDO activity as these cells showed the high IDO activity following IFNγ treatment. CONCLUSION: Although augmentation of T cell proliferation by MenSCs can be a basis for maintenance of endometrial homeostasis to cope with ascending infections, this may not fulfill the requirement for immunological tolerance to a semi-allogeneic fetus. However, more investigation is needed to examine whether or not the immunomodulatory properties of these cells are affected by endometrial microenvironment during pregnancy.

Effects of thermal discharge from Neka power plant (southern Caspian Sea) on macrobenthic diversity and abundance.

Effects of thermal discharge from Neka power plant on macrobenthic diversity and abundance was studied in the southern coast of the Caspian Sea. Samples were collected with Van Veen grab of 0.0250 m2 surface area from 7 stations in winter and summer. A total of 42 species were identified that belonged to 22 genera, 18 families, 13 orders, six classes and three phyla. Bivalve with a total abundance of 90% in winter and 86% in summer constituted the most abundant group throughout samplings, the highest abundance of which belonged to the family Cardiidae. Gastropods followed bivalve in total abundance (8%) in summer and polychaetes (7%) in winter. Statistical analysis indicated significantly higher macrobenthos density at the thermal discharge stations that also took separate positions in the cluster analysis. Temperature was an important factor on the amount of organic matter. Chlorophyll and phaeopigment at the thermal discharge stations were lower than the other stations because of the increased turbulence. The CCA test indicated that temperature was the most influential among all the studied physicochemical factors. The Spearman rank correlation coefficient also showed that the majority of macrobenthic groups had a positive correlation with the organic matter (r = 0.34, p < 0.05). Macrobenthic species were grouped according to their commonalities relative to these three classes using a Bray-Curtis similarity index and similarity profile (SIMPROF) permutation tests analysis (PRIMER 6). Based on the SIMPER analysis, the cockle Hypanis minima and the polychaete Hypaniola kowalewskii with high abundances played the most important role in making differences among the stations, but won't be taken as the "thermal indicating species". The PERMANOVA test showed that the combination of season and stations had a significant effect. The density of macrobenthos was higher in the thermal discharge stations, but diversity in these stations reduced in comparison with the other stations.

Sensitivity of indicators matters when using aggregation methods to assess marine environmental status.

The sensitivity of the 15 indicators included in a complex aggregation method (Nested Environmental status Assessment Tool), applied to a case study in the Caspian Sea in Iran, has been studied to discriminate between areas impacted and non-impacted by bathing activities. Two methods were used: (i) the 15 indicators were grouped into four groups (physicochemical, bacteria, plankton, and benthos) and each group was investigated separately (one-way sensitivity analysis), calculating NEAT values after omitting each group independently; and (ii) indicators were selected randomly, using 1000 Monte Carlo iterations, and removing from 1 to 14 indicators at each iteration. The results revealed that the abundance of Pontogammarus was the single indicator that made the difference in assessing the status among locations, differentiating bathing and non-bathing areas. Hence, this indicator is regarded as a monitoring element detecting the impacts produced by a management measure (beach nourishment) taken by the authorities to maintain the bathing activity.

Promotion of excisional wound repair by a menstrual blood-derived stem cell-seeded decellularized human amniotic membrane.

This is the first study demonstrating the efficacy of menstrual blood-derived stem cell (MenSC) transplantation via decellularized human amniotic membrane (DAM), for the promotion of skin excisional wound repair. The DAM was seeded with MenSCs at the density of 3 × 104 cells/cm2 and implanted onto a rat's 1.50 × 1.50 cm2 full-thickness excisional wound defect. The results of wound closure and histopathological examinations demonstrated that the MenSC-seeded DAM could significantly improve the wound healing compared with DAM-treatment. All in all, our data indicated that the MenSCs can be a potential source for cell-based therapies to regenerate skin injuries.

Nickel-Salen supported paramagnetic nanoparticles for 6-His-target recombinant protein affinity purification.

In this research, a simple, efficient, inexpensive, rapid and high yield method for the purification of 6×histidine-tagged recombinant protein was developed. For this purpose, manganese ferrite magnetic nanoparticles (MNPs) were synthesized through a co-precipitation method and then they were conveniently surface-modified with tetraethyl orthosilicate (TEOS) in order to prevent oxidation and form high density of hydroxyl groups. Next, the salen ligand was prepared from condensation reaction of salicylaldehyde and 3-aminopropyl (trimethoxy) silane (APTMS) in 1:1 molar ratio; followed by complexation with Ni(OAc)2.4H2O. Finally, the prepared Ni(II)-salen complex conjugated to silica coated MNPs and MnFe2O4@SiO2@Ni-Salen complex nanoparticles were obtained. The functionalized nanoparticles were spherical with an average diameter around 70nm. The obtained MNPs had a saturation magnetization about 54 emu/g and had super paramagnetic character. These MNPs were used efficiently to enrich recombinant histidine-tagged (His-tagged) protein-A from bacterial cell lysate. In about 45min, highly pure His-tagged recombinant protein was obtained, as judged by SDS-PAGE analysis and silver staining. The amount of target protein in flow through and washing fractions was minimal denoting the high efficiency of purification process. The average capacity of the matrix was found to be high and about 180±15mgg-1 (protein/MnFe2O4@SiO2@Ni-Salen complex). Collectively, purification process with MnFe2O4@SiO2@Ni-Salen complex nanoparticles is rapid, efficient, selective and whole purification can be carried out in only a single tube without the need for expensive systems.

Application of baited remote underwater video stations to assess benthic coverage in the Persian Gulf.

A baited remote underwater video station (BRUVS) is generally considered an appropriate sampling tool for fish. The applicability of BRUVS to determine the substrate coverage was assessed by comparing stills from BRUVS videos to traditional point intercept transect (PIT) data to estimate percentage cover (PC) of different benthic substrate categories. Mean PCs of hard corals, rock, sand, and coral growth forms yielded statistically identical values with the two survey methods, while PCs of motile epibenthic invertebrates were underestimated by BRUVS in areas of both high and moderate relief. Yet, multivariate analyses revealed that the two methods yield similar substrate assemblage in an area of moderate relief. Results of our study suggest that the BRUVS can be effectively used to quantify both the presence/absence of a basic set of benthic habitat characteristics and diversity of coral growth forms on coral reefs in the Persian Gulf.

Coral reef fish assemblages along a disturbance gradient in the northern Persian Gulf: A seasonal perspective.

Seasonal dynamics of coral reef fish assemblages were assessed along a gradient of potential anthropogenic disturbance in the Northern Persian Gulf. Overall, the attributes of coral reef fish assemblages showed seasonality at two different levels: seasonal changes irrespective of the magnitude of disturbance level (e.g. species richness), and seasonal changes in response to disturbance level (e.g. total abundance and assemblage composition). The examined parameters mostly belonged to the second group, but the interpretation of the relationship between patterns of seasonal changes and the disturbance level was not straightforward. The abundance of carnivorous fishes did not vary among seasons. SIMPER identified the family Nemipteridae as the major contributor to the observed spatiotemporal variations in the composition of coral reef fish assemblages in the study area.