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Genome Biol ; 22(1): 256, 2021 09 03.
Artículo en Inglés | MEDLINE | ID: mdl-34479618

RESUMEN

Currently, different sequencing platforms are used to generate plant genomes and no workflow has been properly developed to optimize time, cost, and assembly quality. We present LeafGo, a complete de novo plant genome workflow, that starts from tissue and produces genomes with modest laboratory and bioinformatic resources in approximately 7 days and using one long-read sequencing technology. LeafGo is optimized with ten different plant species, three of which are used to generate high-quality chromosome-level assemblies without any scaffolding technologies. Finally, we report the diploid genomes of Eucalyptus rudis and E. camaldulensis and the allotetraploid genome of Arachis hypogaea.


Asunto(s)
Genoma de Planta , Secuenciación de Nucleótidos de Alto Rendimiento/métodos , Hojas de la Planta/genética , Programas Informáticos , Arachis/genética , ADN de Plantas/genética , ADN de Plantas/aislamiento & purificación , Diploidia , Especificidad de la Especie , Tetraploidía , Factores de Tiempo
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