Contour-guided deep learning based deformable image registration for dose monitoring during CBCT-guided radiotherapy of prostate cancer.

PURPOSE: To evaluate deep learning (DL)-based deformable image registration (DIR) for dose accumulation during radiotherapy of prostate cancer patients. METHODS AND MATERIALS: Data including 341 CBCTs (209 daily, 132 weekly) and 23 planning CTs from 23 patients was retrospectively analyzed. Anatomical deformation during treatment was estimated using free-form deformation (FFD) method from Elastix and DL-based VoxelMorph approaches. The VoxelMorph method was investigated using anatomical scans (VMorph_Sc) or label images (VMorph_Msk), or the combination of both (VMorph_Sc_Msk). Accumulated doses were compared with the planning dose. RESULTS: The DSC ranges, averaged for prostate, rectum and bladder, were 0.60-0.71, 0.67-0.79, 0.93-0.98, and 0.89-0.96 for the FFD, VMorph_Sc, VMorph_Msk, and VMorph_Sc_Msk methods, respectively. When including both anatomical and label images, VoxelMorph estimated more complex deformations resulting in heterogeneous determinant of Jacobian and higher percentage of deformation vector field (DVF) folding (up to a mean value of 1.90% in the prostate). Large differences were observed between DL-based methods regarding estimation of the accumulated dose, showing systematic overdosage and underdosage of the bladder and rectum, respectively. The difference between planned mean dose and accumulated mean dose with VMorph_Sc_Msk reached a median value of +6.3 Gy for the bladder and -5.1 Gy for the rectum. CONCLUSION: The estimation of the deformations using DL-based approach is feasible for male pelvic anatomy but requires the inclusion of anatomical contours to improve organ correspondence. High variability in the estimation of the accumulated dose depending on the deformable strategy suggests further investigation of DL-based techniques before clinical deployment.

Validity of Ultra-Short-Term HRV Analysis Using PPG-A Preliminary Study.

Continuous measurement of heart rate variability (HRV) in the short and ultra-short-term using wearable devices allows monitoring of physiological status and prevention of diseases. This study aims to evaluate the agreement of HRV features between a commercial device (Bora Band, Biosency) measuring photoplethysmography (PPG) and reference electrocardiography (ECG) and to assess the validity of ultra-short-term HRV as a surrogate for short-term HRV features. PPG and ECG recordings were acquired from 5 healthy subjects over 18 nights in total. HRV features include time-domain, frequency-domain, nonlinear, and visibility graph features and are extracted from 5 min 30 s and 1 min 30 s duration PPG recordings. The extracted features are compared with reference features of 5 min 30 s duration ECG recordings using repeated-measures correlation, Bland-Altman plots with 95% limits of agreements, Cliff's delta, and an equivalence test. Results showed agreement between PPG recordings and ECG reference recordings for 37 out of 48 HRV features in short-term durations. Sixteen of the forty-eight HRV features were valid and retained very strong correlations, negligible to small bias, with statistical equivalence in the ultra-short recordings (1 min 30 s). The current study concludes that the Bora Band provides valid and reliable measurement of HRV features in short and ultra-short duration recordings.

Deep learning-based segmentation in prostate radiation therapy using Monte Carlo simulated cone-beam computed tomography.

PURPOSE: Segmenting organs in cone-beam CT (CBCT) images would allow to adapt the radiotherapy based on the organ deformations that may occur between treatment fractions. However, this is a difficult task because of the relative lack of contrast in CBCT images, leading to high inter-observer variability. Deformable image registration (DIR) and deep-learning based automatic segmentation approaches have shown interesting results for this task in the past years. However, they are either sensitive to large organ deformations, or require to train a convolutional neural network (CNN) from a database of delineated CBCT images, which is difficult to do without improvement of image quality. In this work, we propose an alternative approach: to train a CNN (using a deep learning-based segmentation tool called nnU-Net) from a database of artificial CBCT images simulated from planning CT, for which it is easier to obtain the organ contours. METHODS: Pseudo-CBCT (pCBCT) images were simulated from readily available segmented planning CT images, using the GATE Monte Carlo simulation. CT reference delineations were copied onto the pCBCT, resulting in a database of segmented images used to train the neural network. The studied segmentation contours were: bladder, rectum, and prostate contours. We trained multiple nnU-Net models using different training: (1) segmented real CBCT, (2) pCBCT, (3) segmented real CT and tested on pseudo-CT (pCT) generated from CBCT with cycleGAN, and (4) a combination of (2) and (3). The evaluation was performed on different datasets of segmented CBCT or pCT by comparing predicted segmentations with reference ones thanks to Dice similarity score and Hausdorff distance. A qualitative evaluation was also performed to compare DIR-based and nnU-Net-based segmentations. RESULTS: Training with pCBCT was found to lead to comparable results to using real CBCT images. When evaluated on CBCT obtained from the same hospital as the CT images used in the simulation of the pCBCT, the model trained with pCBCT scored mean DSCs of 0.92 ± 0.05, 0.87 ± 0.02, and 0.85 ± 0.04 and mean Hausdorff distance 4.67 ± 3.01, 3.91 ± 0.98, and 5.00 ± 1.32 for the bladder, rectum, and prostate contours respectively, while the model trained with real CBCT scored mean DSCs of 0.91 ± 0.06, 0.83 ± 0.07, and 0.81 ± 0.05 and mean Hausdorff distance 5.62 ± 3.24, 6.43 ± 5.11, and 6.19 ± 1.14 for the bladder, rectum, and prostate contours, respectively. It was also found to outperform models using pCT or a combination of both, except for the prostate contour when tested on a dataset from a different hospital. Moreover, the resulting segmentations demonstrated a clinical acceptability, where 78% of bladder segmentations, 98% of rectum segmentations, and 93% of prostate segmentations required minor or no corrections, and for 76% of the patients, all structures of the patient required minor or no corrections. CONCLUSION: We proposed to use simulated CBCT images to train a nnU-Net segmentation model, avoiding the need to gather complex and time-consuming reference delineations on CBCT images.