Phytoremediation potential of castor (Ricinus communis L.) in the soils of the abandoned copper mine in Northern Oman: implications for arid regions.

Contamination levels of copper (Cu) and other heavy metals are very high in the soils of the abandoned copper mine of Lasail in the north western Hajar Mountains of Oman. Environment-friendly approaches such as phytoremediation are needed to clean and rehabilitate these areas to their natural status. In the present study, the phytoremediation potential of castor, Ricinus communis L., was evaluated for copper and other heavy metals by growing it in different types of Cu-mine soils and slags. Growth parameters such as shoot height and biomass weight (fresh and dry) were evaluated. Castor showed a high tolerance index (TI) in Cu-mine soils. The highest TI was calculated for the fresh mass of castor shoots in E soil with a percentage of 405.99. The translocation factor (TF) of all the metals except boron (B) and manganese (Mn) was < 1, which reveals that these metals are stabilised in the root portion of the castor. Bioconcentration factor (BCF) value < 1 for Cu indicates that castor is not a hyperaccumulator plant for copper. In addition to high concentrations of copper, other heavy metals such as arsenic (As), iron (Fe), and zinc (Zn) were observed in the roots than in shoots. Castor grown in slag accumulated Cu in the shoots, roots, and entire plant with the values of 25, 1184, and 1209 mg kg-1, respectively. Similarly, castor cultivated in A soil accumulated 18, 901, and 919 mg kg-1 of copper in shoots, roots, and entire plant, respectively. The calculated plant effective number (PENt) indicated the need for 253 castor plants to remove 1 g of Cu from E soil. The ability of castor to grow well in Cu-mine soils suggests that it can be used for the removal of Cu and other heavy metals. Additionally, the shoot portion could potentially be used for oil production since the phytoaccumulation levels of heavy metal concentration in the shoots were below the standard toxicity limits.

Bioremediation of copper by active cells of Pseudomonas stutzeri LA3 isolated from an abandoned copper mine soil.

Copper bioremoval efficiency and bioaccumulation capacity of Pseudomonas stutzeri LA3 isolated from copper contaminated soil were investigated. P. stutzeri LA3 removed about 50% of Cu (II) at 50 mg l-1 of concentration and accumulated a maximum of 1.62 mg of Cu g-1 biomass dry weight. Bioremediation by P. stutzeri LA3 partially depended on the production of extracellular polymeric substances, composed of proteins and carbohydrates. Cell surface alterations were observed on the Cu (II) treated biomass through a scanning electron microscope (SEM). Energy dispersive spectrometer (EDX) investigation of Cu (II) treated biomass showed clear signals of Cu, confirming the presence of copper ions on the cell surface. Fourier transform infrared spectroscopy (FTIR) showed the contribution of functional groups such as hydroxyl (-OH), carboxyl (-COOH), amide and amine (-NH2) in the remediation process. Based on the results, the isolated strain P. stutzeri LA3 could serve as a potential candidate for copper due to its significant copper removal effeciency.

Production of thermotolerant, detergent stable alkaline protease using the gut waste of Sardinella longiceps as a substrate: Optimization and characterization.

The gut wastes of Sardinella longiceps were used as substrate for protease production. The gut waste has 61.6% proteins, 21.8% lipids, 8.5% carbohydrates on dry weight basis and trace elements. The significant factors of protease fermentation were screened by Plackett-Burman design. A protease activity of 68.56 U/ml was predicted at 46.31 °C, incubation time 71.11 h, inoculum 4.86% (v/v) and substrate concentration 2.66% (w/v), using response surface methodology. However, the validation experiment showed 73.52 U/ml activity. The artificial neural network was found as a better tool to predict the experimental results. The partially purified protease showed higher activity at pH 9 and 10 and retained 90% activity after 120 h at pH 9. It showed maximum activity at 50 °C and retained 88% residual activity until 90 min at 50 °C. Zn++ enhanced the protease activity by 40%. The protease retained an activity of 93, 103, 90 and 98% against urea, ß-mercaptoethanol, SDS and tween 80 respectively. The alkaline protease was compatible with all the commercial detergents tested with the residual activity above 90%. The alkaline protease exhibited 22% higher activity on the tryptone soya substrate. The gut waste of S. longiceps is a worthy low cost substrate for the production of industrially important alkaline protease.

Investigating gene flow between the blind cavefish Garra barreimiae and its conspecific surface populations.

Cave-dwelling taxa often share the same phenotypic modifications like absence of eyes and pigmentation. These "troglomorphic characters" are expressed in the populations of Garra barreimiae from the Al Hoota Cave and nearby Hoti Pit in Northern Oman. Surface morphotypes of this cyprinid species are common throughout the distribution area. Very rarely individuals with intermediate phenotypes can be found. In the present study, potential gene flow between cave and surface populations was tested and population structure within five sampling sites was assessed. Overall, 213 individuals were genotyped at 18 microsatellite loci. We found that the cave populations have lower genetic diversity and are clearly isolated from the surface populations, which seem to be sporadically in contact with each other. The results indicate a recent genetic bottleneck in the cave populations. Thus, it can be assumed that during climatic changes the connection between cave and surface water bodies was disjoined, leaving a subpopulation trapped inside. Nevertheless, occasional gene flow between the morphotypes is detectable, but hybridisation seems only possible in cave habitat with permanent connection to surface water. Individuals from surface sites bearing intermediate phenotypes but cave genotypes imply that phenotypic plasticity might play a role in the development of the phenotype.