Relational and interactional dynamic network data from Czech lower-secondary school students.

This article introduces a network data set on the friendships and group work interactions among a convenience sample of 276 Czech Grade 6 students from twelve classrooms, supported by student-level demographic, literacy, motivation, and classroom communication data. Gathered longitudinally at the beginning and end of the 2021/2022 school year, the data provide a relational insight into the nature and evolution of early adolescents' friendships. Moreover, the data provide a unique relational and temporal insight into the verbal interaction of students during classroom group work. This dataset constitutes a valuable resource for educational researchers interested in studying classroom group work as well as for social network scientists studying dynamic social networks.

Population Genomic Analysis of Diploid-Autopolyploid Species.

This chapter outlines an empirical analysis of genome-wide single-nucleotide polymorphism (SNP) variation and its underlying drivers among multiple natural populations within a diploid-autopolyploid species. The aim is to reconstruct the genetic structure among natural populations of varying ploidy and infer footprints of selection in these populations, framed around specific questions that are typically encountered when analyzing a mixed-ploidy data set,e.g., addressing the relevance of natural whole-genome duplication for speciation and adaptation. We briefly review the options for the analysis of polyploid population genomic data involving variant calling, population structure, demographic history inference, and selection scanning approaches. Further, we provide suggestions for methods and associated software, possible caveats, and examples of their application to mixed-ploidy and autopolyploid data sets.

Effect of population size and selection on Toll-like receptor diversity in populations of Galápagos mockingbirds.

The interactions of evolutionary forces are difficult to analyse in free-living populations. However, when properly understood, they provide valuable insights into evolutionary biology and conservation genetics. This is particularly important for the interplay of genetic drift and natural selection in immune genes that confer resistance to disease. The Galápagos Islands are inhabited by four closely related species of mockingbirds (Mimus spp.). We used 12 different-sized populations of Galápagos mockingbirds and one population of their continental relative northern mockingbird (Mimus polyglottos) to study the effects of genetic drift on the molecular evolution of immune genes, the Toll-like receptors (TLRs: TLR1B, TLR4 and TLR15). We found that neutral genetic diversity was positively correlated with island size, indicating an important effect of genetic drift. However, for TLR1B and TLR4, there was little correlation between functional (e.g., protein) diversity and island size, and protein structural properties were largely conserved, indicating only a limited effect of genetic drift on molecular phenotype. By contrast, TLR15 was less conserved and even its putative functional polymorphism correlated with island size. The patterns observed for the three genes suggest that genetic drift does not necessarily dominate selection even in relatively small populations, but that the final outcome depends on the degree of selection constraint that is specific for each TLR locus.

Comparative Study of Powder Carriers Physical and Structural Properties.

High specific surface area (SSA), porous structure, and suitable technological characteristics (flow, compressibility) predetermine powder carriers to be used in pharmaceutical technology, especially in the formulation of liquisolid systems (LSS) and solid self-emulsifying delivery systems (s-SEDDS). Besides widely used microcrystalline cellulose, other promising materials include magnesium aluminometasilicates, mesoporous silicates, and silica aerogels. Clay minerals with laminar or fibrous internal structures also provide suitable properties for liquid drug incorporation. This work aimed at a comparison of 14 carriers' main properties. Cellulose derivatives, silica, silicates, and clay minerals were evaluated for flow properties, shear cell experiments, SSA, hygroscopicity, pH, particle size, and SEM. The most promising materials were magnesium aluminometasilicates, specifically Neusilin® US2, due to its proper flow, large SSA, etc. Innovative materials such as FujiSil® or Syloid® XDP 3050 were for their properties evaluated as suitable. The obtained data can help choose a suitable carrier for formulations where the liquid phase is incorporated into the solid dosage form. All measurements were conducted by the same methodology and under the same conditions, allowing a seamless comparison of property evaluation between carriers, for which available company or scientific sources do not qualify due to different measurements, conditions, instrumentation, etc.

Intelligent high-tech coating of natural biopolymer layers.

Polymeric materials play a vital role in our daily life, but the growing concern for the environment demands economical and natural biopolymers that can be cross-linked to create technologically innovative lightweight materials. Their cellular matrix with extreme flexibility makes them highly acceptable for application prospects in material science, engineering, and biomedical applications. Furthermore, their biocompatibility, mechanical properties, and structural diversity provide a gateway to research them to form technologically important materials. In the light of the same, the review covers cellulose derivatives. The first section of the study covers the general properties and applications of cellulose and its derivatives. Then, the biopolymers are characterised based on their dielectric properties, crystallinity, rheology, and mechanical properties. An in-depth analysis of the diffuse process of swelling and dissolution followed by a brief discussion on diffusion and diffusion of crosslinking has been done. The review also covers a section on swelling and swelling kinetics of carboxymethyl cellulose (CMC) and hydroxyethyl cellulose (HEC). The examination of all the aforementioned parameters gives an insight into the future aspects of the biopolymers. Lastly, the study briefly covers some preferred choices of cross-linking agents and their effect on the biopolymers.

Parallel adaptation in autopolyploid Arabidopsis arenosa is dominated by repeated recruitment of shared alleles.

Relative contributions of pre-existing vs de novo genomic variation to adaptation are poorly understood, especially in polyploid organisms. We assess this in high resolution using autotetraploid Arabidopsis arenosa, which repeatedly adapted to toxic serpentine soils that exhibit skewed elemental profiles. Leveraging a fivefold replicated serpentine invasion, we assess selection on SNPs and structural variants (TEs) in 78 resequenced individuals and discover significant parallelism in candidate genes involved in ion homeostasis. We further model parallel selection and infer repeated sweeps on a shared pool of variants in nearly all these loci, supporting theoretical expectations. A single striking exception is represented by TWO PORE CHANNEL 1, which exhibits convergent evolution from independent de novo mutations at an identical, otherwise conserved site at the calcium channel selectivity gate. Taken together, this suggests that polyploid populations can rapidly adapt to environmental extremes, calling on both pre-existing variation and novel polymorphisms.

Graphene with Covalently Grafted Amino Acid as a Route Toward Eco-Friendly and Sustainable Supercapacitors.

Eco-friendly, electrochemically active electrode materials based on covalent graphene derivatives offer enormous potential for energy storage applications. However, covalent grafting of functional groups onto the graphene surface is challenging due to its low reactivity. Here, fluorographene chemistry was employed to graft an arginine moiety via its guanidine group homogeneously on both sides of graphene. By tuning the reaction conditions and adding a non-toxic pore-forming agent, an optimum degree of functionalization and hierarchical porosity was achieved in the material. This tripled the specific surface area and yielded a high capacitance value of approximately 390 F g-1 at a current density of 0.25 A g-1 . The applicability of the electrode material was investigated under typical operating conditions by testing an assembled supercapacitor device for up to 30000 charging/discharging cycles, revealing capacitance retention of 82.3 %. This work enables the preparation of graphene derivatives with covalently grafted amino acids for technologically important applications, such as supercapacitor-based energy storage.

Genomic basis of parallel adaptation varies with divergence in Arabidopsis and its relatives.

Parallel adaptation provides valuable insight into the predictability of evolutionary change through replicated natural experiments. A steadily increasing number of studies have demonstrated genomic parallelism, yet the magnitude of this parallelism varies depending on whether populations, species, or genera are compared. This led us to hypothesize that the magnitude of genomic parallelism scales with genetic divergence between lineages, but whether this is the case and the underlying evolutionary processes remain unknown. Here, we resequenced seven parallel lineages of two Arabidopsis species, which repeatedly adapted to challenging alpine environments. By combining genome-wide divergence scans with model-based approaches, we detected a suite of 151 genes that show parallel signatures of positive selection associated with alpine colonization, involved in response to cold, high radiation, short season, herbivores, and pathogens. We complemented these parallel candidates with published gene lists from five additional alpine Brassicaceae and tested our hypothesis on a broad scale spanning ∼0.02 to 18 My of divergence. Indeed, we found quantitatively variable genomic parallelism whose extent significantly decreased with increasing divergence between the compared lineages. We further modeled parallel evolution over the Arabidopsis candidate genes and showed that a decreasing probability of repeated selection on the same standing or introgressed alleles drives the observed pattern of divergence-dependent parallelism. We therefore conclude that genetic divergence between populations, species, and genera, affecting the pool of shared variants, is an important factor in the predictability of genome evolution.

One-Step Synthesis of Janus Fluorographene Derivatives.

Fluorographene, a two-dimensional derivative of graphene, is an excellent starting material for the synthesis of graphene derivatives. In this work, a one-step, substrate-free method for the asymmetric functionalization of fluorographene layers with hydroxyl groups by a facile nucleophilic substitution reaction is reported. Such a chemical modification occurs in a biphasic aqueous-organic system under mild conditions, leading to Janus graphene nanosheets functionalized by hydroxyl groups on one side and retaining fluorine atoms on the other. The reported experimental route paves the way for two-dimensional bifacial graphene templates, thus broadening the application potential of graphene materials.

Association between louse abundance and MHC II supertypes in Galápagos mockingbirds.

Major histocompatibility complex class II (MHC II) is an essential molecule triggering the adaptive immune response by the presentation of pathogens to helper T cells. The association between individual MHC II variants and various parasites has become a frequent finding in studies of vertebrate populations. However, although bird ectoparasites have a significant effect on their host's fitness, and the host's immune system can regulate ectoparasitic infections, no study has yet investigated the association between MHC II polymorphism and ectoparasite infection in the populations of free-living birds. Here, we test whether an association exists between the abundance of a chewing louse (Myrsidea nesomimi) and MHC II polymorphism of its hosts, the Galápagos mockingbirds (Mimus). We have found that the presence of two MHC II supertypes (functionally differentiated clusters) was significantly associated with louse abundance. This pattern supports the theory that a co-evolutionary interaction stands behind the maintenance of MHC polymorphism. Moreover, we have found a positive correlation between louse abundance and heterophil/lymphocyte ratio (an indicator of immunological stress) that serves as an additional piece of evidence that ectoparasite burden is affected by immunological state of Galápagos mockingbirds.

Flow induced HeLa cell detachment kinetics show that oxygen-containing functional groups in graphene oxide are potent cell adhesion enhancers.

A broader and quantitative understanding of cell adhesion to two-dimensional carbon-based materials is needed to expand the applications of graphene and graphene oxide (GO) in tissue engineering, prosthetics, biosensing, detection of circulating cancer cells, and (photo)thermal therapy. We therefore studied the detachment kinetics of human cancer cells HeLa adhered on graphene, GO, and glass substrates using stagnation point flow on an impinging jet apparatus. HeLa cells detached easily from graphene at a force of 9.4 nN but adhered very strongly to GO. The presence of hydrophilic functional groups thus apparently enhanced the HeLa cells' adherence to the GO surface. On graphene, smaller HeLa cells adhered more strongly and detached later than cells with larger projected areas, but the opposite behavior was observed on GO. These findings reveal GO to be a suitable platform for detecting cells or establishing contacts, e.g. between graphene-based circuits/electrodes and tissues. Our experiments also show that the impinging jet method is a powerful tool for studying cellular detachment mechanisms and adhesion strength, and could therefore be very useful for investigating interactions between cells and graphene-based materials.

New record of Microtusmystacinus in eastern Kazakhstan: phylogeographical considerations.

The Eastern European vole (Microtusmystacinus) is an arvicoline rodent distributed across northern and eastern Europe, the Balkans, Turkey, Armenia, NW and N Iran, Russia as far east as the Tobol River in W Siberia, and W and N Kazakhstan. We present a novel records from eastern Kazakhstan (the village of Dzhambul - 49°14'21.3"N, 86°18'29.9"E and the village of Sekisovka - 50°21'9.18"N, 82°35'46.5"E) based on mtDNA and we discuss implications of this findings on biogeography of eastern Kazakhstan populations. Marine Isotope Stage 11 is considered an important period for the diversification of the arvalis species group. In the context of our study, it is important to analyse genetically discontinuous Siberian populations, and the current distribution of Microtusmystacinus in new localities in eastern Kazakhstan.

Balancing selection and genetic drift create unusual patterns of MHCIIß variation in Galápagos mockingbirds.

The extracellular subunit of the major histocompatibility complex MHCIIß plays an important role in the recognition of pathogens and the initiation of the adaptive immune response of vertebrates. It is widely accepted that pathogen-mediated selection in combination with neutral micro-evolutionary forces (e.g. genetic drift) shape the diversity of MHCIIß, but it has proved difficult to determine the relative effects of these forces. We evaluated the effect of genetic drift and balancing selection on MHCIIß diversity in 12 small populations of Galápagos mockingbirds belonging to four different species, and one larger population of the Northern mockingbird from the continental USA. After genotyping MHCIIß loci by high-throughput sequencing, we applied a correlational approach to explore the relationships between MHCIIß diversity and population size by proxy of island size. As expected when drift predominates, we found a positive effect of population size on the number of MHCIIß alleles present in a population. However, the number of MHCIIß alleles per individual and number of supertypes were not correlated with population size. This discrepancy points to an interesting feature of MHCIIß diversity dynamics: some levels of diversity might be shaped by genetic drift while others are independent and possibly maintained by balancing selection.

Surface energy analysis (SEA) and rheology of powder milk dairy products.

Results of inverse gas chromatography adsorption/desorption experiments using selected probes on skimmed milk, whey and demineralised whey powder materials are presented. The dispersive component of surface energy was found to be dominant, indicating a low polarity character. Surface energy profiles of demineralised whey and skimmed milk showed a characteristic steep exponential decrease from approximately 170 mJ/m(2) to 60 mJ/m(2) and 140 mJ/m(2) to 45 mJ/m(2), respectively, whereas whey powder exhibited a constant (non-exponential) surface energy at approximately 45 mJ/m(2). The dispersive surface energy of demineralised whey and skimmed milk powder showed a broad distribution ranging from 40 mJ/m(2) to 120 mJ/m(2) and 175 mJ/m(2), respectively. In contrast, the dispersive surface energy distribution for whey was very narrow, ranging from only 42.8 mJ/m(2) to 45 mJ/m(2). The determined yield locus and Mohr's circles indicated that demineralised whey exhibited free flowing powder characteristics, whereas skimmed milk and whey exhibited cohesive powder flow behaviour.