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1.
ACS Catal ; 10(3): 1913-1922, 2020 Feb 07.
Artículo en Inglés | MEDLINE | ID: mdl-32064142

RESUMEN

Using colloidal iron oxide nanoparticles with organic ligands, anchored in a separate step from the supports, has been shown to be beneficial to obtain homogeneously distributed metal particles with a narrow size distribution. Literature indicates that promoting these particles with sodium and sulfur creates an active Fischer-Tropsch catalyst to produce olefins, while further adding an H-ZSM-5 zeolite is an effective way to obtain aromatics. This research focused on the promotion of iron oxide colloids with sodium and sulfur using an inorganic ligand exchange followed by the attachment to H-ZSM-5 zeolite crystals. The catalyst referred to as FeP/Z, which consists of iron particles with inorganic ligands attached to a H-ZSM-5 catalyst, was compared to an unpromoted Fe/Z catalyst and an Fe/Z-P catalyst, containing the colloidal nanoparticles with organic ligands, promoted after attachment. A low CO conversion was observed on both FeP/Z and Fe/Z-P, originating from an overpromotion effect for both catalysts. However, when both promoted catalysts were washed (FeP/Z-W and Fe/Z-P-W) to remove the excess of promoters, the activity was much higher. Fe/Z-P-W simultaneously achieved low selectivity toward methane as part of the promoters were still present after washing, whereas for FeP/Z-W the majority of promoters was removed upon washing, which increased the methane selectivity. Moreover, due to the addition of Na+S promoters, the iron nanoparticles in the FeP/Z(-W) catalysts had grown considerably during catalysis, while those in Fe/Z-P(-W) and Fe/Z(-W) remained relatively stable. Lastly, as a large broadening of particle sizes for the used FeP/Z-W was found, where particle sizes had both increased and decreased, Ostwald ripening is suggested for particle growth accelerated by the presence of the promoters.

2.
J Nutr Health Aging ; 18(5): 479-86, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24886734

RESUMEN

OBJECTIVES: To investigate diet and nutrition-related factors associated with bone loss in a group of postmenopausal (PM) women. Nutritional intake, inflammatory markers and body composition (weight, body mass index, fat/lean mass) were analysed for associations with bone mineral density (BMD). DESIGN: A cross sectional study examining correlations between BMD (Duel-energy X ray absorptiometry; (DXA) and dietary intake (3-day diaries), body composition and plasma bone and inflammatory markers: C-terminal telopeptide of type I collagen (CTX) and procollagen type I N propeptide (P1NP), C- reactive protein (CRP), interleukin 6 and 10 (IL-6, IL-10), tumour necrosis factor (TNF) and osteoprotegerin (OPG). SETTING: Community dwelling women from the Auckland, Hawke's Bay and Manawatu regions in New Zealand. PARTICIPANTS: 142 healthy, PM women aged 50-70 years. RESULTS: OPG (per kilogram fat mass) was increased in women with osteoporosis (p<0.001) compared to groups classified with normal BMD and osteopenia. Protein, vitamin B12, zinc, potassium and dairy intake were all positively correlated with higher BMD while dairy and potassium intakes also inversely correlated with CTX. Body composition (weight, BMI and fat/lean mass) had strong positive associations with BMD. Multiple regression analysis showed body weight, potassium and dairy intake were predictors of increased BMD in PM women and explained 39% (r2=0.39, p< 0.003) of variance. CONCLUSION: BMD was negatively correlated with OPG and positively with weight, dairy and potassium intake. This study highlights the importance of maintaining adequate body weight and emphasising dairy and potassium predominantly sourced from fruit/vegetables to reduce bone loss at midlife.


Asunto(s)
Peso Corporal , Densidad Ósea , Citocinas/sangre , Dieta , Salud , Osteoporosis Posmenopáusica/prevención & control , Posmenopausia/fisiología , Absorciometría de Fotón , Anciano , Composición Corporal , Índice de Masa Corporal , Enfermedades Óseas Metabólicas/metabolismo , Proteína C-Reactiva/metabolismo , Colágeno Tipo I/sangre , Estudios Transversales , Productos Lácteos , Proteínas en la Dieta/administración & dosificación , Femenino , Humanos , Inflamación/sangre , Inflamación/metabolismo , Interleucina-10/sangre , Interleucina-6/sangre , Persona de Mediana Edad , Nueva Zelanda , Osteoporosis Posmenopáusica/metabolismo , Osteoprotegerina/sangre , Fragmentos de Péptidos/sangre , Péptidos/sangre , Posmenopausia/sangre , Potasio/metabolismo , Procolágeno/sangre , Factor de Necrosis Tumoral alfa/sangre , Vitamina B 12/metabolismo , Zinc/metabolismo
3.
Mol Genet Metab ; 104(4): 587-91, 2011 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-21880526

RESUMEN

McArdle disease is an autosomal recessive glycogenosis due to deficiency of the enzyme myophosphorylase. It results from homozygous or compound heterozygous mutations in the gene for this enzyme, PYGM. We report six novel mutations in the PYGM gene based upon sequencing data including three missense mutations (p.D51G, p.P398L, and p.N648Y), one nonsense mutation (p.Y75X), one frame-shift mutation (p.Y114SfsX181), and one amino acid deletion (p.Y53del) in six patients with McArdle disease. We also report on a Caucasian family that appeared to transmit McArdle disease in an autosomal dominant manner. In order to evaluate the potential pathogenicity of the sequence variants, we performed in silico analysis using PolyPhen-2 and SIFT BLink, along with species conservation analysis using UCSC Genome Browser. The above mutations were all predicted to be disease associated with high probability and with at least the same level of certainty as several confirmed mutations. The current data add to the list of pathogenic mutations in the PYGM gene associated with McArdle disease.


Asunto(s)
Genes Dominantes , Glucógeno Fosforilasa de Forma Muscular/genética , Enfermedad del Almacenamiento de Glucógeno Tipo V/genética , Mutación , Adolescente , Adulto , Secuencia de Aminoácidos , Niño , Simulación por Computador , Secuencia Conservada , Análisis Mutacional de ADN , Femenino , Estudios de Asociación Genética , Glucógeno Fosforilasa de Forma Muscular/deficiencia , Enfermedad del Almacenamiento de Glucógeno Tipo V/enzimología , Haplotipos , Humanos , Masculino , Persona de Mediana Edad , Modelos Moleculares , Adulto Joven
4.
J Med Genet ; 45(2): 87-92, 2008 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-17932119

RESUMEN

BACKGROUND: Adolescent idiopathic scoliosis (AIS) is the most common form of spinal deformity, affecting up to 4% of children worldwide. Familial inheritance of AIS is now recognised and several potential candidate loci have been found. METHODS: We studied 25 multi-generation AIS families of British descent with at least 3 affected members in each family. A genomewide screen was performed using microsatellite markers spanning approximately 10-cM intervals throughout the genome. This analysis revealed linkage to several candidate chromosomal regions throughout the genome. Two-point linkage analysis was performed in all families to evaluate candidate loci. After identification of candidate loci, two-point linkage analysis was performed in the 10 families that segregated, to further refine disease intervals. RESULTS: Significant linkage was obtained in a total of 10 families: 8 families to the telomeric region of chromosome 9q, and 2 families to the telomeric region of 17q. A significant LOD score was detected at marker D9S2157 Z(max) = 3.64 ( theta= 0.0) in a four-generation family (SC32). Saturation mapping of the 9q region in family SC32 defined the critical disease interval to be flanked by markers D9S930 and D9S1818, spanning approximately 21 Mb at 9q31.2-q34.2. In addition, seven other families segregated with this locus on 9q. In two multi-generation families (SC36 and SC23) not segregating with the 9q locus, a maximum combined LOD score of Z(max) = 4.08 ( = 0.0) was obtained for marker AAT095 on 17q. Fine mapping of the 17q candidate region defined the AIS critical region to be distal to marker D17S1806, spanning approximately 3.2 Mb on chromosome 17q25.3-qtel. CONCLUSION: This study reports a common locus for AIS in the British population, mapping to a refined interval on chromosome 9q31.2-q34.2 and defines a novel AIS locus on chromosome 17q25.3-qtel.


Asunto(s)
Cromosomas Humanos Par 17/genética , Cromosomas Humanos Par 9/genética , Genes Dominantes , Escoliosis/genética , Adolescente , Mapeo Cromosómico , Femenino , Genotipo , Humanos , Escala de Lod , Masculino , Fenotipo , Escoliosis/patología
5.
Artículo en Inglés | MEDLINE | ID: mdl-18002864

RESUMEN

Healthcare monitoring is a general concern for patients requiring a continuous medical assistance and treatment. In order to increase mobility of such patients, a huge effort is pursued worldwide for the development of wearable monitoring systems able to measure vital physiological parameters such as respiratory movements, cardiac activity, pulse oximetry, temperature of the body [1]. Technical or smart textiles that incorporate different sensors play a growing role in these developments as they are well suited for wearability and can ensure comfort to the user [2, 3]. While most developments up to now have been focused on the use of electrical sensors, the aim of OFSETH [4] is to take advantage of pure optical sensing technologies for extending the capabilities of medical technical textiles for wearable health monitoring. OFSETH expects to achieve a breakthrough in healthcare monitoring applications where standard (non-optical) monitoring techniques show significant limits such as for the monitoring of anesthetized patients under Medical Resonance Imaging (MRI).


Asunto(s)
Tecnología de Fibra Óptica , Imagen por Resonancia Magnética/instrumentación , Imagen por Resonancia Magnética/métodos , Monitoreo Fisiológico/instrumentación , Monitoreo Fisiológico/métodos , Textiles , Anestesia/métodos , Humanos
6.
Ann Hum Genet ; 70(Pt 5): 666-76, 2006 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-16907711

RESUMEN

We have used genealogies and genomic polymorphisms to estimate individual inbreeding coefficients (F) in 50 subjects with an expected range (based on recent genealogies) of F from 0.0 to 0.0625. The estimates were based on two approaches, using genotypes respectively from 410 microsatellite markers (410-STR panel) and from 10,000 SNPs (10K-SNP panel). The latter was performed in a sub-sample of 15 individuals. We concluded that for both marker panels measures of inbreeding based on the excess of homozygosity over Hardy-Weinberg expectation were not closely correlated with 4-5 generation genealogical F-values. For the 10K-SNP panel we found two alternative measures which correlated more closely with F, based respectively on standard errors and on paired homozygosity of nearby SNPs over distances of 2-4 cM. We propose an empirical method for estimating standard errors and hence individual F-values, based on the variation between individual autosomes. This method could provide useful estimates of average F-values for groups of individuals in population-based studies of the effects of inbreeding/homozygosity on quantitative traits.


Asunto(s)
Consanguinidad , Genealogía y Heráldica , Heterocigoto , Repeticiones de Microsatélite , Croacia , Genotipo , Homocigoto , Humanos , Repeticiones de Microsatélite/genética , Polimorfismo Genético , Polimorfismo de Nucleótido Simple , Escocia
7.
Clin Genet ; 68(5): 448-53, 2005 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-16207213

RESUMEN

An analysis of PAX1 in the development of vertebral malformations. Due to the sporadic occurrence of congenital vertebral malformations, traditional linkage approaches to identify genes associated with human vertebral development are not possible. We therefore identified PAX1 as a candidate gene in vertebral malformations and congenital scoliosis due to its mutation in the undulated mouse. We performed DNA sequence analysis of the PAX1 gene in a series of 48 patients with congenital vertebral malformations, collectively spanning the entire vertebral column length. DNA sequence coding variants were identified in the heterozygous state in exon 4 in two male patients with thoracic vertebral malformations. One patient had T9 hypoplasia, T12 hemivertebrae and absent T10 pedicle, incomplete fusion of T7 posterior elements, ventricular septal defect, and polydactyly. This patient had a CCC (Pro)-->CTC (Leu) change at amino acid 410. This variant was not observed in 180 chromosomes tested in the National Institute of Environmental Health Sciences (NIEHS) single nucleotide polymorphism (SNP) database and occurred at a frequency of 0.3% in a diversity panel of 1066 human samples. The second patient had a T11 wedge vertebra and a missense mutation at amino acid 413 corresponding to CCA (Pro)-->CTA (Leu). This particular variant has been reported to occur in one of 164 chromosomes in the NIEHS SNP database and was found to occur with a similar frequency of 0.8% in a diversity panel of 1066 human samples. Although each patient's mother was clinically asymptomatic and heterozygous for the respective variant allele, the possibility that these sequence variants have clinical significance is not excluded.


Asunto(s)
Mutación , Factores de Transcripción Paired Box/genética , Columna Vertebral/anomalías , Secuencia de Bases , Análisis Mutacional de ADN , Humanos , Morfogénesis/genética , Fenotipo , Escoliosis/genética , Enfermedades de la Columna Vertebral/genética
8.
Conf Proc IEEE Eng Med Biol Soc ; 2004: 3266-9, 2004.
Artículo en Inglés | MEDLINE | ID: mdl-17270978

RESUMEN

The prototype of a communicating underclothe for medical remote monitoring was realized. It delivers physiological information on the subject (Cardiac Frequency, Breathing Frequency, surface and mid-temperature) as well as the environment and activity parameters (ambient temperature, fall detection). It also enables the automatic data transfer on event, with the localization of the subject.

9.
Stud Health Technol Inform ; 108: 260-5, 2004.
Artículo en Inglés | MEDLINE | ID: mdl-15718654

RESUMEN

The paper describes the development of biomedical clothing for ambulatory telemonitoring of human vital parameters. VTAM (Vetement de Tele-Assistance Medicale) presents a T-shirt made from textile with woven wires and incorporating four smooth dry ECG electrodes, a breath rate sensor, a shock/fall detector and two temperature sensors. The garment is equipped for the signal pre-computing and transmission through a miniature GSM/GPRS module kept on a belt together with the power supply. Three VTAM prototypes have been tested on persons in a normal state of health using a medical protocol to assess the biomedical data that include an ECG reading, a pneumogram, temperature and fall detection in mobile situations.


Asunto(s)
Vestuario , Monitoreo Ambulatorio/instrumentación , Telemedicina/métodos , Técnicas Biosensibles , Temperatura Corporal , Electrocardiografía Ambulatoria/instrumentación , Humanos , Monitoreo Ambulatorio/métodos
10.
Eur J Clin Nutr ; 55(11): 940-50, 2001 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-11641742

RESUMEN

OBJECTIVE: To compare self-reported total energy intake (TEI) estimated using two databases with total energy expenditure (TEE) measured by doubly labeled water in physically active lean and sedentary obese young women, and to compare reporting accuracy between the two subject groups. DESIGN: A cross-sectional study in which dietary intakes of women trained in diet-recording procedures were analyzed using the Minnesota Nutrition Data System (NDS; versions 2.4/6A/21, 2.6/6A/23 and 2.6/8.A/23) and Nutritionist III (N3; version 7.0) software. Reporting accuracy was determined by comparison of average TEI assessed by an 8 day estimated diet record with average TEE for the same period. RESULTS: Reported TEI differed from TEE for both groups irrespective of nutrient database (P<0.01). Measured TEE was 11.10+/-2.54 and 11.96+/-1.21 MJ for lean and obese subjects, respectively. Reported TEI, using either database, did not differ between groups. For lean women, TEI calculated by NDS was 7.66+/-1.73 MJ and by N3 was 8.44+/-1.59 MJ. Corresponding TEI for obese women were 7.46+/-2.17 MJ from NDS and 7.34+/-2.27 MJ from N3. Lean women under-reported by 23% (N3) and 30% (NDS), and obese women under-reported by 39% (N3) and 38% (NDS). Regardless of database, lean women reported higher carbohydrate intakes, and obese women reported higher total fat and individual fatty acid intakes. Higher energy intakes from mono- and polyunsaturated fatty acids were estimated by NDS than by N3 in both groups of women (P< or =0.05). CONCLUSIONS: Both physically active lean and sedentary obese women under-reported TEI regardless of database, although the magnitude of under-reporting may be influenced by the database for the lean women. SPONSORSHIP: USDA Hatch Project award (ARZT-136528-H-23-111) to LB Houtkooper and WH Howell.


Asunto(s)
Ingestión de Energía/fisiología , Autorrevelación , Adolescente , Adulto , Agua Corporal , Estudios Transversales , Bases de Datos Factuales , Registros de Dieta , Femenino , Humanos , Obesidad/psicología , Reproducibilidad de los Resultados , Sensibilidad y Especificidad
11.
Am J Med Genet ; 105(2): 163-7, 2001 Mar 08.
Artículo en Inglés | MEDLINE | ID: mdl-11304830

RESUMEN

Utilizing DNA samples from 91 Afrikaner nuclear families with one or more affected children, five genomic regions on chromosomes 2p, 8q, 11q, 20q, and 21q that gave evidence for association with GTS in previous case-control association studies were investigated for linkage and association with GTS. Highly polymorphic markers with mean heterozygosity of 0.77 were typed and resulting genotypes evaluated using single marker transmission disequilibrium (TDT), single marker haplotype relative risk (HRR), and multi-marker "extended" TDT and HRR methods. Single marker TDT analysis showed evidence for linkage or association, with p-values near 0.05, for markers D2S139, GATA28F12, and D11S1377 on chromosomes 2p11, 8q22 and 11q23-24, respectively. Extended, two-locus TDT and HRR analysis provided further evidence for linkage or association on chromosome 2 with p-values of 0.007 and 0.025, and chromosome 8 with p-values of 0.059 and 0.013, respectively. These results provide important additional evidence for the location of GTS susceptibility loci.


Asunto(s)
Cromosomas Humanos Par 11 , Cromosomas Humanos Par 2 , Cromosomas Humanos Par 8 , Ligamiento Genético , Predisposición Genética a la Enfermedad , Síndrome de Tourette/etnología , Síndrome de Tourette/genética , Población Blanca/genética , Estudios de Casos y Controles , Etnicidad/genética , Salud de la Familia , Marcadores Genéticos , Genotipo , Haplotipos , Humanos , Desequilibrio de Ligamiento , Repeticiones de Microsatélite/genética , Modelos Genéticos , Países Bajos/etnología , Reacción en Cadena de la Polimerasa , Polimorfismo Genético , Sudáfrica
12.
Am J Hum Genet ; 68(4): 874-83, 2001 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-11231899

RESUMEN

The olfactory receptor (OR)-gene superfamily is the largest in the mammalian genome. Several of the human OR genes appear in clusters with > or = 10 members located on almost all human chromosomes, and some chromosomes contain more than one cluster. We demonstrate, by experimental and in silico data, that unequal crossovers between two OR gene clusters in 8p are responsible for the formation of three recurrent chromosome macrorearrangements and a submicroscopic inversion polymorphism. The first two macrorearrangements are the inverted duplication of 8p, inv dup(8p), which is associated with a distinct phenotype, and a supernumerary marker chromosome, +der(8)(8p23.1pter), which is also a recurrent rearrangement and is associated with minor anomalies. We demonstrate that it is the reciprocal of the inv dup(8p). The third macrorearrangment is a recurrent 8p23 interstitial deletion associated with heart defect. Since inv dup(8p)s originate consistently in maternal meiosis, we investigated the maternal chromosomes 8 in eight mothers of subjects with inv dup(8p) and in the mother of one subject with +der(8), by means of probes included between the two 8p-OR gene clusters. All the mothers were heterozygous for an 8p submicroscopic inversion that was delimited by the 8p-OR gene clusters and was present, in heterozygous state, in 26% of a population of European descent. Thus, inversion heterozygosity may cause susceptibility to unequal recombination, leading to the formation of the inv dup(8p) or to its reciprocal product, the +der(8p). After the Yp inversion polymorphism, which is the preferential background for the PRKX/PRKY translocation in XX males and XY females, the OR-8p inversion is the second genomic polymorphism that confers susceptibility to the formation of common chromosome rearrangements. Accordingly, it may be possible to develop a profile of the individual risk of having progeny with chromosome rearrangements.


Asunto(s)
Rotura Cromosómica/genética , Inversión Cromosómica , Familia de Multigenes/genética , Polimorfismo Genético/genética , Receptores Odorantes/genética , Deleción Cromosómica , Cromosomas Artificiales Bacterianos/genética , Cromosomas Humanos Par 8/genética , Clonación Molecular , Mapeo Contig , Intercambio Genético/genética , Sondas de ADN/genética , Electroforesis en Gel de Campo Pulsado , Femenino , Genes Duplicados/genética , Heterocigoto , Humanos , Hibridación Fluorescente in Situ , Masculino , Repeticiones de Microsatélite/genética
13.
Nature ; 409(6822): 951-3, 2001 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-11237020

RESUMEN

Recombination is the exchange of information between two homologous chromosomes during meiosis. The rate of recombination per nucleotide, which profoundly affects the evolution of chromosomal segments, is calculated by comparing genetic and physical maps. Human physical maps have been constructed using cytogenetics, overlapping DNA clones and radiation hybrids; but the ultimate and by far the most accurate physical map is the actual nucleotide sequence. The completion of the draft human genomic sequence provides us with the best opportunity yet to compare the genetic and physical maps. Here we describe our estimates of female, male and sex-average recombination rates for about 60% of the genome. Recombination rates varied greatly along each chromosome, from 0 to at least 9 centiMorgans per megabase (cM Mb(-1)). Among several sequence and marker parameters tested, only relative marker position along the metacentric chromosomes in males correlated strongly with recombination rate. We identified several chromosomal regions up to 6 Mb in length with particularly low (deserts) or high (jungles) recombination rates. Linkage disequilibrium was much more common and extended for greater distances in the deserts than in the jungles.


Asunto(s)
Mapeo Físico de Cromosoma , Recombinación Genética , Femenino , Humanos , Desequilibrio de Ligamiento , Masculino , Caracteres Sexuales , Secuencias Repetidas en Tándem
14.
J Neurosci ; 21(1): 176-85, 2001 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-11150334

RESUMEN

Appropriate development of nervous system connectivity involves a variety of processes, including neuronal life-and-death decisions, differentiation, axon guidance and migration, and synaptogenesis. Although these activities likely require specialized signaling events, few substrates unique to these neurotrophic functions have been identified. Here we describe the cloning of ankyrin repeat-rich membrane spanning (ARMS), which encodes a novel downstream target of neurotrophin and ephrin receptor tyrosine kinases, Trk and Eph, respectively. The amino acid sequence of ARMS is highly conserved from nematode to human, suggesting an evolutionarily conserved role for this protein. The ARMS protein consists of 1715 amino acids containing four putative transmembrane domains, multiple ankyrin repeats, a sterile alpha motif domain, and a potential PDZ-binding motif. In the rat, ARMS is specifically expressed in the developing nervous system and in highly plastic areas of the adult brain, regions enriched in Trks and Eph receptors. ARMS can physically associate with TrkA and p75 neurotrophin receptors. Moreover, endogenous ARMS protein is tyrosine phosphorylated after neurotrophin treatment of pheochromocytoma 12 cells and primary hippocampal neurons or ephrin B treatment of NG108-15 cells, demonstrating that ARMS is a downstream target for both neurotrophin and ephrin receptors.


Asunto(s)
Secuencia Conservada/genética , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Factores de Crecimiento Nervioso/metabolismo , Fosfoproteínas , Proteínas Tirosina Quinasas Receptoras/metabolismo , Receptores de Factor de Crecimiento Nervioso/metabolismo , Secuencias de Aminoácidos/genética , Animales , Repetición de Anquirina/genética , Línea Celular , Sistema Nervioso Central/citología , Sistema Nervioso Central/metabolismo , Clonación Molecular , Humanos , Datos de Secuencia Molecular , Factores de Crecimiento Nervioso/farmacología , Especificidad de Órganos , Células PC12 , Fosforilación , ARN Mensajero/biosíntesis , Ratas , Ratas Sprague-Dawley , Proteínas Tirosina Quinasas Receptoras/genética , Receptor EphA1 , Receptor de Factor de Crecimiento Nervioso , Receptor trkA/metabolismo , Receptor trkB/metabolismo , Homología de Secuencia de Aminoácido
15.
Adv Genet ; 42: 77-96, 2001.
Artículo en Inglés | MEDLINE | ID: mdl-11037315

RESUMEN

Efficient and effective whole-genome 10-cM short tandem repeat polymorphism (STRP) scans are now available. Doubling or tripling STRP density to an average spacing of 3-5 cM is readily achievable. However, if typing costs for diallelic polymorphisms can be brought close to, or preferably less than, one-third those of STRPs, then diallelics may gradually supplement or supplant STRPs in whole-genome scans. The power of higher density genome scans for gene map ping by association and for many other research and clinical applications is great. It would be wise to continue investing heavily for many years in genotyping technology.


Asunto(s)
Genoma Humano , Genotipo , Predicción , Marcadores Genéticos , Humanos , Fenotipo
16.
Eur J Hum Genet ; 8(11): 875-83, 2000 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-11093278

RESUMEN

Gilles de la Tourette syndrome (GTS) is a common, heritable neurological disorder manifested by chronic motor and vocal tics with childhood onset. Previous extensive linkage analysis failed to identify a GTS gene based on an autosomal dominant pattern of inheritance. Recently, a family was reported with a balanced chromosomal translocation t(1;8)(q21.1;q22.1) in family members with GTS or tics. Chromosome 8q22.1 was previously implicated in GTS by both association and linkage results. We therefore cloned and sequenced both translocation breakpoints from this family. The CBFA2T1 gene was identified 11 kb distal to the 8q22.1 breakpoint. Sequencing of CBFA2TI exons within 37 unrelated GTS patients failed to identify any mutations. However, it is possible that the translocation altered the expression of this gene or another nearby gene. Examination of the breakpoint sequences revealed a duplication of six nucleotides from chromosome 8 but no change in the chromosome 1 sequence. The sequences immediately flanking the breakpoints on the two chromosomes were modestly similar, but the breakpoints did not occur within known interspersed repeats. Our results add to our knowledge of the genetics of GTS and the mechanisms of balanced chromosomal translocations.


Asunto(s)
Rotura Cromosómica/genética , Cromosomas Humanos Par 1/genética , Cromosomas Humanos Par 8/genética , Síndrome de Tourette/genética , Translocación Genética , Bacteriófagos , Secuencia de Bases , Cromosomas Bacterianos , Mapeo Contig , Cósmidos , ADN/química , ADN/genética , Salud de la Familia , Humanos , Hibridación Fluorescente in Situ , Datos de Secuencia Molecular , Alineación de Secuencia , Análisis de Secuencia de ADN , Homología de Secuencia de Ácido Nucleico , Síndrome de Tourette/patología
17.
J Comp Neurol ; 425(2): 295-314, 2000 Sep 18.
Artículo en Inglés | MEDLINE | ID: mdl-10954847

RESUMEN

Tyro-3, Axl, and Mer are three related receptor protein-tyrosine kinases (RPTKs) characterized by an extracellular domain exhibiting significant amino acid sequence similarity to neural cell adhesion molecules. The molecule Gas6 (for growth arrest-specific gene-6) has been shown to activate each of these receptors. Gas6 is expressed extensively in the central nervous system (CNS), suggesting that interactions between Gas6 and its receptors are likely to have physiologically relevant functions. To identify and localize the relevant Gas6/RPTK pairs, we have characterized the developmental expression of Tyro-3, Axl, and Mer in rat CNS using blotting and mRNA in situ hybridization analyses. Throughout development, Tyro-3 was the most widely expressed of the three receptors in the CNS, with Axl and Mer detected in only a limited number of sites in the adult. Tyro-3 expression was low in the embryo and increased markedly during early postnatal stages, with a time course paralleling that of synaptogenesis. Axl and Mer were expressed at low but relatively constant levels throughout development. In the cerebellum, all three receptors were found in Purkinje cells, and Tyro-3 was also detected in both granule neurons and Bergmann glia. Insofar as Gas6 has been previously shown to also be expressed by Purkinje cells, it may be engaged in both autocrine and paracrine signaling. The three receptors were also detected in cerebellar white matter, primarily during myelination. In the cortex, Tyro-3 was expressed at high levels during postnatal development and in the adult. Beginning at P6 in the hippocampus, Tyro-3 was expressed at high levels in CA1 pyramidal neurons and at lower levels in CA3 and was not detected in dentate granule neurons. Axl and Mer were found in the molecular layer of the dentate gyrus and were absent from the pyramidal and dentate granule neurons. In that Gas6 is expressed throughout the pyramidal cell layer, it may activate these cells in both an autocrine and a paracrine manner. These studies provide initial clues for elucidating the cellular functions of the Axl subfamily members and suggest potential complex Gas6/RPTK as well as RPTK/RPTK signaling interactions in the mature and developing CNS.


Asunto(s)
Sistema Nervioso Central/embriología , Sistema Nervioso Central/crecimiento & desarrollo , Péptidos y Proteínas de Señalización Intercelular , Moléculas de Adhesión de Célula Nerviosa/metabolismo , Proteínas Oncogénicas/metabolismo , Proteínas Proto-Oncogénicas , Ratas Sprague-Dawley/embriología , Ratas Sprague-Dawley/crecimiento & desarrollo , Proteínas Tirosina Quinasas Receptoras/metabolismo , Factores de Edad , Animales , Animales Recién Nacidos , Western Blotting , Células Cultivadas , Sistema Nervioso Central/metabolismo , Cerebelo/embriología , Cerebelo/crecimiento & desarrollo , Cerebelo/metabolismo , Corteza Cerebral/embriología , Corteza Cerebral/crecimiento & desarrollo , Corteza Cerebral/metabolismo , Feto , Regulación del Desarrollo de la Expresión Génica/fisiología , Hipocampo/embriología , Hipocampo/crecimiento & desarrollo , Hipocampo/metabolismo , Fibras Nerviosas Mielínicas/metabolismo , Fibras Nerviosas Mielínicas/ultraestructura , Neuroglía/citología , Neuroglía/metabolismo , Neuronas/citología , Neuronas/metabolismo , Oligodendroglía/citología , Oligodendroglía/metabolismo , Proteínas/metabolismo , Ratas , Ratas Sprague-Dawley/metabolismo , Tirosina Quinasa c-Mer , Tirosina Quinasa del Receptor Axl
18.
Int J Obes Relat Metab Disord ; 24(8): 982-8, 2000 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-10951536

RESUMEN

OBJECTIVE: Obesity, as measured by body mass index, is highly prevalent in Native American children, yet there are no valid equations to estimate total body fatness for this population. This study was designed to develop equations to estimate percentage body fat from anthropometry and bioelectrical impedance as a critical part of Pathways, a multi-site study of primary prevention of obesity in Native American children. DESIGN: Percentage fat was estimated from deuterium oxide dilution in 98 Native American children (Pima/Maricopa, Tohono O'odham and White Mountain Apache tribes) between 8 and 11 y of age. The mean fat content (38.4%+/-8. 1%) was calculated assuming the water content of the fat-free body was 76%. Initial independent variables were height, weight, waist circumference, six skinfolds and whole-body resistance and reactance from bioelectrical impedance (BIA). RESULTS: Using all-possible-subsets regressions with the Mallows C (p) criterion, and with age and sex included in each regression model, waist circumference, calf and biceps skinfolds contributed least to the multiple regression analysis. The combination of weight, two skinfolds (any two out of the four best: triceps, suprailiac, subscapular and abdomen) and bioelectrical impedance variables provided excellent predictability. Equations without BIA variables yielded r2 almost as high as those with BIA variables. The recommended equation predicts percentage fat with a root mean square error=3.2% fat and an adjusted r2=0.840. CONCLUSION: The combination of anthropometry and BIA variables can be used to estimate total body fat in field studies of Native American children. The derived equation yields considerably higher percentage fat values than other skinfold equations in children.


Asunto(s)
Tejido Adiposo/anatomía & histología , Composición Corporal , Indígenas Norteamericanos/estadística & datos numéricos , Obesidad/epidemiología , Obesidad/prevención & control , Antropometría , Arizona/epidemiología , Niño , Protección a la Infancia/estadística & datos numéricos , Óxido de Deuterio/análisis , Impedancia Eléctrica , Femenino , Humanos , Masculino , Obesidad/etnología , Valores de Referencia , Análisis de Regresión , Saliva/química
19.
Am J Hum Genet ; 66(6): 1871-81, 2000 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-10793009

RESUMEN

Type 2 diabetes is a serious, genetically influenced disease for which no fully effective treatments are available. Identification of biochemical or regulatory pathways involved in the disease syndrome could lead to innovative therapeutic interventions. One way to identify such pathways is the genetic analysis of families with multiple affected members where disease predisposing genes are likely to be segregating. We undertook a genomewide screen (389-395 microsatellite markers) in samples of 835 white, 591 Mexican American, 229 black, and 128 Japanese American individuals collected as part of the American Diabetes Association's GENNID study. Multipoint nonparametric linkage analyses were performed with diabetes, and diabetes or impaired glucose homeostasis (IH). Linkage to diabetes or IH was detected near markers D5S1404 (map position 77 cM, LOD = 2.80), D12S853 (map position 82 cM, LOD = 2.81) and GATA172D05 (X-chromosome map position 130 cM, LOD = 2.99) in whites, near marker D3S2432 (map position 51 cM, LOD = 3.91) in Mexican Americans, and near marker D10S1412 (map position 14 cM, LOD = 2.39) in African Americans mainly collected in phase 1 of the study. Further analyses showed evidence for interactions between the chromosome 5 locus and region on chromosome 12 containing the MODY 3 gene (map position 132 cM) and between the X-chromosome locus and region near D12S853 (map position 82 cM) in whites. Although these results were not replicated in samples collected in phase 2 of the GENNID study, the region on chromosome 12 was replicated in samples from whites described by Bektas et al. (1999).


Asunto(s)
Proteínas de Unión al ADN , Diabetes Mellitus Tipo 2/genética , Predisposición Genética a la Enfermedad/genética , Proteínas Nucleares , Grupos Raciales/genética , Edad de Inicio , Glucemia/análisis , Índice de Masa Corporal , Mapeo Cromosómico , Cromosomas Humanos/genética , Diabetes Mellitus Tipo 2/epidemiología , Etnicidad/genética , Factor Nuclear 1 del Hepatocito , Factor Nuclear 1-alfa del Hepatocito , Factor Nuclear 1-beta del Hepatocito , Homeostasis , Humanos , Insulina/sangre , Japón/etnología , Escala de Lod , México/etnología , Repeticiones de Microsatélite/genética , Persona de Mediana Edad , Linaje , Estadísticas no Paramétricas , Factores de Transcripción/genética , Estados Unidos
20.
Am J Hum Genet ; 67(1): 92-9, 2000 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-10825281

RESUMEN

The aggressiveness of prostate cancer (PCa) varies widely: some tumors progress to invasive, potentially life-threatening disease, whereas others stay latent for the remainder of an individual's lifetime. The mechanisms resulting in this variability are not yet understood, but they are likely to involve both genetic and environmental influences. To investigate genetic factors, we conducted a genomewide linkage analysis of 513 brothers with PCa, using the Gleason score, which reflects tumor histology, as a quantitative measure of PCa aggressiveness. To our knowledge, this is the first time that a measure of PCa aggressiveness has been directly investigated as a quantitative trait in a genomewide scan. We employed a generalized multipoint Haseman-Elston linkage-analysis approach that regresses the mean-corrected cross product between the brothers' Gleason scores on the estimated proportion of alleles shared by brothers identical by descent at each marker location. Our results suggest that candidate regions on chromosomes 5q, 7q, and 19q give evidence for linkage to PCa-aggressiveness genes. In particular, the strongest signals detected in these regions were at the following markers (with corresponding P values): for chromosome 5q31-33, between markers D5S1480 and D5S820 (P=.0002); for chromosome 7q32, between markers D7S3061 and D7S1804 (P=.0007); and, for chromosome 19q12, at D19S433 (P=.0004). This indicates that one or more of these candidate regions may contain genes that influence the progression of PCa from latent to invasive disease. Identification of such genes would be extremely valuable for elucidation of the mechanism underlying PCa progression and for determination of treatment in men in whom this disease has been diagnosed.


Asunto(s)
Ligamiento Genético/genética , Neoplasias de la Próstata/genética , Neoplasias de la Próstata/patología , Adulto , Anciano , Anciano de 80 o más Años , Mapeo Cromosómico , Cromosomas Humanos/genética , Marcadores Genéticos/genética , Pruebas Genéticas , Genoma Humano , Humanos , Masculino , Análisis por Apareamiento , Persona de Mediana Edad , Invasividad Neoplásica , Núcleo Familiar , Fenotipo
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