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1.
Sci Data ; 11(1): 340, 2024 Apr 05.
Artículo en Inglés | MEDLINE | ID: mdl-38580722

RESUMEN

Despite the rapid advances in sequencing technology, limited genomic resources are currently available for phytophagous spider mites, which include many important agricultural pests. One of these pests is Tetranychus piercei (McGregor), a serious banana pest in East Asia exhibiting remarkable tolerance to high temperature. In this study, we assembled a high-quality genome of T. piercei using a combination of PacBio long reads and Illumina short reads sequencing. With the assistance of chromatin conformation capture technology, 99.9% of the contigs were anchored into three pseudochromosomes with a total size of 86.02 Mb. Repetitive elements, accounting for 14.16% of this genome (12.20 Mb), are predominantly composed of long-terminal repeats (30.7%). By combining evidence of ab initio prediction, transcripts, and homologous proteins, we annotated 11,881 protein-coding genes. Both the genome and proteins have high BUSCO completeness scores (>94%). This high-quality genome, along with reliable annotation, provides a valuable resource for investigating the high-temperature tolerance of this species and exploring the genomic basis that underlies the host range evolution of spider mites.


Asunto(s)
Tetranychidae , Animales , Cromosomas , Genoma , Genómica , Anotación de Secuencia Molecular , Filogenia , Secuencias Repetitivas de Ácidos Nucleicos , Tetranychidae/genética
2.
Insect Sci ; 30(5): 1208-1228, 2023 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-37279769

RESUMEN

The phytophagous mite Tetranychus truncatus is a serious pest in East Asia but has a relatively narrower host range than the pest mite Tetranychus urticae, which can feed on over 1200 plant species. Here, we generated a high-quality chromosomal level genome of T. truncatus and compared it with that of T. urticae, with an emphasis on the genes related to detoxification and chemoreception, to explore the genomic basis underlying the evolution of host range. We also conducted population genetics analyses (in 86 females from 10 populations) and host transfer experiments (in 4 populations) to investigate transcription changes following transfer to a low-quality host (Solanum melongena, eggplant), and we established possible connections between fitness on eggplant and genes related to detoxification and chemoreception. We found that T. truncatus has fewer genes related to detoxification, transport, and chemoreception than T. urticae, with a particularly strong reduction in gustatory receptor (GR) genes. We also found widespread transcriptional variation among T. truncatus populations, which varied in fitness on eggplant. We characterized selection on detoxification-related genes through ω values and found a negative correlation between expression levels and ω values. Based on the transcription results, as well as the fitness and genetic differences among populations, we identified genes potentially involved in adaptation to eggplant in T. truncatus. Our work provides a genomic resource for this pest mite and new insights into mechanisms underlying the adaptation of herbivorous mites to host plants.

3.
Insects ; 11(4)2020 Apr 07.
Artículo en Inglés | MEDLINE | ID: mdl-32272643

RESUMEN

Fopius arisanus is a solitary endoparasitoid that parasitizes a variety of tephritid species. Native to the Indo-Australian region, it is currently exploited worldwide as a biological control agent due to its exceptional efficiency in reducing pest populations. The efficiency of any biological control program is affected by the host location ability of the parasitoids. The present study used a Y-tube olfactometer to test the behavioural responses of female F. arisanus to four fruit species which had undergone different types of damages: undamaged, damaged through Bactrocera dorsalis ovipositioning (i.e., infested), or different levels of mechanical damage. Our results suggest that F. arisanus females were significantly attracted to mangoes and pears (vs. purified air), regardless of their condition; however, whilst infested mangoes did not attract more female parasitoids compared to healthy or mechanically damaged fruits, infested pears attracted significantly more. For citrus fruits and peaches, oviposition damage caused them to be more attractive to parasitoid females. In terms of the longevity of the effects, infested mango fruits remained attractive for up to 5 days after infestation, whereas for infested peaches, pears, and citrus fruits, the attractiveness tended to decrease as time passed. Regarding mechanical damage, mango fruits that had undergone any intensity of damage were equally attractive to parasitoid females; however, peach and citrus fruits with high levels of mechanical damage were more attractive, and pears were found to be most attractive with slight mechanical damage. Additional to the above, we also tested the effect of insecticides on behavioural responses using mangoes. We found that the treatment of infested fruits with lambda-cyhalothrin and cypermethrin remained attractive to F. arisanus females, albeit to different extents, which is in contrast to spinosad, cyantraniliprole, and acetamiprid. Finally, we suggest that the host-searching behaviour of F. arisanus females is mainly mediated by oviposition-induced volatiles, either emitted from the fruit or left by the fruit fly.

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