DDX5 inhibits inflammation by modulating m6A levels of TLR2/4 transcripts during bacterial infection.

DExD/H-box helicases are crucial regulators of RNA metabolism and antiviral innate immune responses; however, their role in bacteria-induced inflammation remains unclear. Here, we report that DDX5 interacts with METTL3 and METTL14 to form an m6A writing complex, which adds N6-methyladenosine to transcripts of toll-like receptor (TLR) 2 and TLR4, promoting their decay via YTHDF2-mediated RNA degradation, resulting in reduced expression of TLR2/4. Upon bacterial infection, DDX5 is recruited to Hrd1 at the endoplasmic reticulum in an MyD88-dependent manner and is degraded by the ubiquitin-proteasome pathway. This process disrupts the DDX5 m6A writing complex and halts m6A modification as well as degradation of TLR2/4 mRNAs, thereby promoting the expression of TLR2 and TLR4 and downstream NF-κB activation. The role of DDX5 in regulating inflammation is also validated in vivo, as DDX5- and METTL3-KO mice exhibit enhanced expression of inflammatory cytokines. Our findings show that DDX5 acts as a molecular switch to regulate inflammation during bacterial infection and shed light on mechanisms of quiescent inflammation during homeostasis.

Understanding the Quantum Rabi Ring Using Analogies to Quantum Magnetism.

We map a quantum Rabi ring, consisting of N cavities arranged in a ring geometry, into an effective magnetic model containing the XY exchange and the Dzyaloshinskii-Moriya (DM) interactions. The analog of the latter is induced by an artificial magnetic field, which modulates photon hopping between nearest-neighbor cavities with a phase. This mapping facilitates the description and understanding of the different phases in the quantum optical model through simple arguments of competing magnetic interactions. For the square geometry (N=4) the rich phase diagram exhibits three superradiant phases denoted as ferro-superradiant, antiferro-superradiant, and chiral superradiant. In particular, the DM interaction is responsible for the chiral phase in which the energetically degenerate configurations of the order parameters are similar to the in-plane magnetizations of skyrmions with different helicities. The antiferro-superradiant phase is suppressed in the triangle geometry (N=3) as geometric frustration contributes to stabilize the chiral phase even for small values of the DM interaction. The chiral phases for odd and even N show a different scaling behavior close to the phase transition. The equivalent behavior on both systems opens the possibility of simulating chiral magnetism in a few-body quantum optical platform, as well as understanding one system using the insights gained from the other.

Quantum Phases in a Quantum Rabi Triangle.

The interplay of interactions, symmetries, and gauge fields usually leads to intriguing quantum many-body phases. To explore the nature of emerging phases, we study a quantum Rabi triangle system as an elementary building block for synthesizing an artificial magnetic field. We develop an analytical approach to study the rich phase diagram and the associated quantum criticality. Of particular interest is the emergence of a chiral-coherent phase, which breaks both the Z_{2} and the chiral symmetry. In this chiral phase, photons flow unidirectionally and the chirality can be tuned by the artificial gauge field, exhibiting a signature of broken time-reversal symmetry. The finite-frequency scaling analysis further confirms the associated phase transition to be in the universality class of the Dicke model. This model can simulate a broad range of physical phenomena of light-matter coupling systems, and may have an application in future developments of various quantum information technologies.

[Effects of leaf extracts of Amorpha fruticosa on seed germination and seedling growth of Amygdalus pedunculata]. / 紫穗槐叶片浸提液对长柄扁桃种子萌发和幼苗生长的影响.

Amorpha fruticosa and Amygdalus pedunculata are common plant species used for greening construction in arid and semi-arid region of Northwest China. In order to explore the feasibility of greening construction and ecological restoration by A. fruticose with A. pedunculata, we exami-ned the allelopathic effects of five concentrations of aqueous leaf extracts of A. fruticosa (0.025, 0.05, 0.10, 0.15 and 0.20 g·mL-1) on eight A. pedunculata varieties (YY1, YY3, YY4, YY5, YY6, SM6, SM7 and SM8), using the methods of paper-petri dish and soilless culture. The results showed that when the concentration of A. fruticosa leaf extracts were 0.025 and 0.05 g·mL-1, the seed germination and seedling growth of YY1 and SM6 were significantly better than other varieties. With increasing concentration of A. fruticosa leaf extracts, the catalase activity of A. pedunculata seedlings first increased and then decreased. The activities of peroxidase and superoxide dismutase, and the contents of soluble protein and chlorophyll showed a downward trend, while the contents of malondialdehyde and soluble sugar and the permeability of cell membrane gradually increased. Results of the principal component and cluster analysis showed that the growth potential of A. pedunculata decreased with the order of YY1, SM6, SM8, SM7, YY6, YY3, YY5 and YY4 under the allelopathic effect of A. fruticose. In conclusion, the artificial collocation and mixed planting of low-density of A. fruticosa with YY1 and SM6 were beneficial to seed germination and seedling growth of A. pedunculata.

Legacy and alternative flame retardants in typical freshwater cultured fish ponds of South China: Implications for evolving industry and pollution control.

The production and usage of polybrominated diphenyl ethers (PBDEs) has been gradually phased out and the application of alternative halogenated flame retardants (AHFRs) has been continuously increased. It is essential to understand how the evolving flame retardants industry has affected the occurrence and flux of legacy and alternative flame retardants so that better pollution control measures can be made accordingly. Air, rainwater, inflowing river water, pond water, pond sediment, fish feed, and fish collected from freshwater cultured fish ponds (FWCFPs) within the Pearl River Delta, South China were analyzed for PBDEs and AHFRs. Concentrations of AHFRs in air (range; median: 7.8-870; 210 pg m-3), rainwater (0.88-65; 4.8 ng L-1), and sediment (19-120; 54 ng g-1 dry weight (d.w.)) were one order of magnitude higher than those of PBDEs in air (12-98; 21 pg m-3), rainwater (0.18-15; 0.70 ng L-1), and sediment (1.5-9.6, 2.9 ng g-1 d.w.) (t-test; p < 0.05). Decabromodiphenyl ether and decabromodiphenylethane were the predominant BDE and AHFR components, respectively, agreeing well with the production and usage patterns of flame retardants in China. The average input fluxes of AHFRs to the FWCFPs via dry deposition, wet deposition, net air-water exchange, and feeding (38.6, 20.6, and 2.14, µg m-2 yr-1) were one order of magnitude higher than those of PBDEs (3.44, 5.17, and -10.1, µg m-2 yr-1). Elevated occurrence and input fluxes of AHFRs suggested that aquaculture production is potentially facing a new challenge from alternative flame retardants. Atmospheric dry and wet deposition are important input sources of AHFRs to the FWCFPs. Feeding is an important input pathway for both PBDEs and AHFRs. Pollution control measures should be modified to accommodate the evolving flame retardants industry.

Selected antibiotics and current-use pesticides in riverine runoff of an urbanized river system in association with anthropogenic stresses.

Antibiotics and current-use pesticides are ubiquitous in the environment. It is important to figure out their spatial distribution under the influences of anthropogenic activities and transport from rivers to coastal oceans. To address this knowledge gap, the present study conducted quarterly sampling in eight main runoff outlets of the Pearl River, South China, and obtained total concentrations of antibiotics and current-use pesticides at 24-296 ng L-1. Higher total concentrations of these chemicals occurred in summer, attributed to seasonal consumption patterns and washout by rainfalls, respectively. The spatial distributions of target analytes were not significantly different between the eastern and western outlets with high and moderate urbanization levels, respectively. Approximately 16.4, 17.7, and 12.5 tons of antibiotics, organophosphorus pesticides, and neonicotinoids were discharged annually from the outlets to the South China Sea. These results suggested that usage amount and hydrology exhibited positive effects on the riverine inputs of the target chemicals. In addition, most target chemicals exhibited low risks to green algae, but erythromycin and parathion posed high ecological risks to aquatic organism (Daphnid and fish).

Powerful harmonic charging in a quantum battery.

We consider a harmonic charging field as an energy charger for the quantum battery, which consists of an ensemble of two-level atoms. The charging of noninteracting atoms is completely fulfilled, which exhibits a substantial improvement over previous static charging fields. Involving the repulsive interactions of atoms, the fully charging is achieved with shorter charged period over the noninteracting case, yielding an advantage for the charging. Excluding the charging field, a quantum phase transition is induced by the attractive atom-atom interactions, and the interacting atoms become degenerate in the ground state. We find that the degenerate states play a negative role in the charging due to the gapless energies. The atoms with strong attractive interactions can not be charged completely, which is accompanied by a drop of the maximum stored energy.

MicroRNA-9 enhanced radiosensitivity and its mechanism of DNA methylation in non-small cell lung cancer.

In order to improve the therapeutic effect of non-small cell lung cancer (NSCLC), it is critical to combine radiation and gene therapy. Our study found that the activation of microRNA-9 (miR-9) conferred ionizing radiation (IR) sensitivity in cancer cells. Furthermore, increased microRNA-9 promoter methylation level was observed after IR. Our study combined the IR and microRNA-9 overexpression treatment which leads to a significant enhancement in the therapeutic efficiency in lung cancer both in vitro and in vivo. Therefore, it is plausible that microRNA-9 can be used as a novel therapeutic strategy of NSCLC. MTT assay was performed to detect the effect of microRNA-9 on the survival and growth of NSCLC cells. Flow cytometry results showed that microRNA-9 enhanced the apoptosis of NSCLC cells. Wound healing assay found that microRNA-9 can inhibit the migration of NSCLC cells and enhance the effect of radiation on the migration of NSCLC cells. In addition, bisulfate sequencing PCR was performed to analyze the methylation status of the microRNA-9 promoter. In order to determine the effect of microRNA-9 and its promoter methylation status on proliferation and radio-sensitivity in vivo, a subcutaneous tumor formation assay in nude mice was performed. Results have shown that microRNA-9 overexpression increased the radiosensitivity of A549 cells by inhibiting cell activity and migration, and by increasing apoptosis. In addition, the promoter methylation status of the microRNA-9 gene increased in response to ionizing radiation. Our study demonstrated that microRNA-9 enhanced radiosensitivity in NSCLC and this effect is highly regulated by its promoter methylation status. These results will help to clarify regulatory mechanisms of radiation resistance thus stimulate new methods for improving radiotherapy for NSCLC.

Isolation and identification of the umami peptides from shiitake mushroom by consecutive chromatography and LC-Q-TOF-MS.

Umami is critical to the taste of shiitake mushroom. To isolate and identify umami peptides, fractions from hydrolyzed dried shiitake mushroom were separated by ultrafiltration, gel filtration chromatography (GFC), and reversed-phase high-performance liquid chromatography (RP-HPLC). Separations were combined with sensory evaluations (grading and taste dilution analysis) and analysis of electronic tongue, which were used to identify the most umami component in shiitake mushroom. Low-molecular-weight fractions (MW < 3 kDa) have the strongest flavor in the shiitake mushroom hydrolysate. In the 3 subfractions separated from low-molecular-weight fractions (MW < 3 kDa) by GFC, the second subfraction (F2) was selected for RP-HPLC analysis. The first peak (G1) in RP-HPLC was identified by LC-Q-TOF-MS, and 2 tripeptides and 3 dipeptides were identified. The amino acid sequence of these peptides were Gly-Cys-Gly, Glu-Pro-Glu, Cys-Met, Val-Phe, and Gly-Glu.

Kinetics of 5-hydroxymethylfurfural formation in the sugar-amino acid model of Maillard reaction.

BACKGROUND: As a potential health hazard, 5-hydroxymethylfurfural (HMF) has been detected in thermally processed foods high in sugar and amino acids. In order to analyze HMF quantitatively and investigate the kinetics of its formation, high-performance liquid chromatography was employed to determine the content of HMF in six sugar-amino acid thermal reaction models. RESULTS: In thermal reaction models, formation of HMF was significantly affected by sugar and amino acid composition, pH value and heating conditions. HMF formation increased with increasing sugar and amino acid (cysteine excepted) content, temperature and reaction time. A maximum amount of HMF of 1.50 g kg-1 was detected in the sucrose-glutamic acid model at 110 °C and 6 h. Low pH value and added acidic amino acids promoted the formation of HMF, especially in the sucrose-containing system. CONCLUSION: HMF formation followed first-order kinetics in four models, including the model of glucose-cysteine, glucose-glutamic acid, glucose-leucine and sucrose-leucine. In contrast, HMF formation followed zero-order kinetics in the model of sucrose-glutamic acid. The quantity of HMF increased as the quantity of sugar and amino acid increased (cysteine excepted) in six tested models. © 2018 Society of Chemical Industry.

Comparison of non-volatile umami components in chicken soup and chicken enzymatic hydrolysate.

Umami taste is an important part to the taste of chicken. To isolate and identify non-volatile umami compounds, fractions from chicken soup and hydrolysate were prepared and analyzed. Amino acids were analyzed by amino acid analyzer. Organic acids and nucleotides were determined by ultra-performance liquid chromatography. Separation procedures utilizing ultrafiltration, Sephadex G-15 and reversed-phase high-performance liquid chromatography were used to isolate umami taste peptides. Combined with sensory evaluation and LC-Q-TOF-MS, the amino acid sequences of 12 oligopeptides were determined. The amount of taste compounds was higher in chicken enzymatic hydrolysate than that of chicken soup. Eight oligopeptides from chicken enzymatic hydrolysate were identified, including Ala-Asp, Ala-Met, His-Ser, Val-Glu, Ala-Glu, Asp-Ala-Gly, Glu-Asp and Ala-Glu-Ala. Four oligopeptides from chicken soup were identified, including Val-Thr, Ala-His, Ala-Phe and Thr-Glu.

A comparison between oral chemotherapy combined with radiotherapy and radiotherapy for newly diagnosed glioblastoma: A systematic review and meta-analysis.

The prognosis of glioblastoma (GBM), a major subtype of grade IV glioma, is rather poor nowadays. The efficiency of chemotherapy serving as the adjunct to radiotherapy (RT) for treating GBM is still controversial. In this study, we aim to investigate the overall survival (OS) and progression-free survival (PFS) in patients with newly diagnosed GBM received RT plus chemotherapy or with RT alone.Literatures were searched from the PubMed, Embase, and Cochrane Library between January 2001 and June 2015. Study selection was conducted based on the following criteria: randomized clinical trial (RCT) of adjuvant RT plus chemotherapy versus RT alone; studies comparing OS and/or PFS; and studies including cases medically confirmed of newly diagnosed GBM.Five RCTs (1655 patients) were eligible in this study. The meta-analysis showed a significant improvement in OS of patients treated with RT plus oral chemotherapy compared with that of RT alone (hazard ratio 0.70; 95% confidence interval, 0.56-0.88, P = .002).Adjuvant chemotherapy confers a survival benefit in patients newly diagnosed with GBM.

[Studies on difference of chemical compositions in plant species of Tripterygium genus].

We studied the content of chemical compositions and correlation among species of Tripterygium genus by principal component analysis(PCA) and variance analysis(ANOVA), and we also studied the difference among the 3 species.Using [BMIm]PF6 ionic liquid-based ultrasonic-assisted extraction, we determined the contents of 11 compounds including wilforgine, wilforzine, triptophenolide, wilforine, triptoquinone A, triptolide, tripterin, egallocatechin, epigallocatechin, catechin, and epicatechin in 28 batches of the Tripterygium species by HPLC and PCA. Partial least squares analysis (PLS) and ANOVA were also performed to verify the results.The analysis results of PCA and PLS showed that three species of Tripterygium genus were clustered into three regions respectively, and triptoquinone A was the important factor which affected the aggregation of these three species.There was a significant difference among the contents of 11 chemical components in the three species(P<0.000 1).These results indicated that there was a certain correlation between the chemical compositions and the classification of the species, and the difference of the chemical compositions among the three species was obvious. In this work, the content determination method is rapid and accurate, and the analysis method is simple and convenient, which provides a reference for the classification, the efficacy and the toxicity of the species.

Determination of the Free Amino Acid, Organic Acid, and Nucleotide in Commercial Vinegars.

The selected taste-active compounds in several kinds of commercial vinegar including amino acids, organic acids, and nucleotides were determined by High Performance Liquid Chromatography (HPLC). The results showed that glutamine and alanine, which contribute the umami and sweet taste to the flavor of vinegar, are high in Taste Activity Value (TAV). Acetic acid is the major organic acid in vinegar, making up as much as 91.4% of the total organic acid composition. Nucleotides, which were only detected in 5 brands of commercial vinegar and are both low in TAV, contribute less taste in vinegar. Our research provides a multiple chemical compositional characterization of vinegar and proposes a possibility of classification of different kinds of vinegar.

A study of asymmetrical mixed-valent Mo2-Mo2 complexes in the class III regime.

Three novel asymmetrical dimolybdenum dimers, [Mo2(DAniF)3]2(µ-OOCCOS) (DAniF = N,N'-di(p-anisyl)formamidinate) ([OO-OS]), [Mo2(DAniF)3]2(µ-S2CCO2) ([SS-OO]), and [Mo2(DAniF)3]2(µ-SSCCOS) ([SS-OS]), have been synthesized and characterized by either single-crystal X-ray crystallography or 1H NMR spectroscopy. The structural asymmetry for these compounds gives rise to a redox asymmetry, which enlarges the potential separation (ΔE1/2) between the two [Mo2] units. The mixed-valance (MV) species [OO-OS]+, [SS-OO]+ and [SS-OS]+, prepared by one-electron chemical oxidation of the neutral precursors, exhibit an intense and symmetrical intervalence charge transfer (IVCT) absorption band in the near-IR region, along with the high energy metal (δ) to ligand (π*) (ML) and ligand (π) to metal (δ) charge transfer (LMCT) absorptions. The LMCT band, which is absent in the neutral precursors, is reflective of the cationic [Mo2]+ unit in the MV species; therefore, it is evidenced that in the MV complexes optical electron transfer from the electron donor to acceptor occurs, while the thermal process is energetically unfavorable. The C(1)-C(2) bonds (1.44-1.48 Å) that connect the two [Mo2] units are significantly shorter than a C-C single bond, showing that the two Mo2 centers are strongly coupled. For the series, TD-DFT calculations show that the molecular orbitals have an unsymmetrical charge density distribution over the two dimolybdenum sites. For each of the complex systems, the calculated orbital energy gaps, SOMO(δ - δ)-LUMO(bridging ligand π*), HOMO-8(bridging ligand π)-SOMO(δ - δ) and SOMO(δ - δ)-HOMO-1(δ + δ), are in good agreement with the observed MLCT, LMCT and IVCT absorption band energies, respectively. The consistency in energy between the IVCT band and the SOMO(δ - δ)-HOMO-1(δ + δ) gap permits assignment of the MV complexes to Class III in the Robin-Day scheme.

Cantharimide and Its Derivatives from the Blister Beetle Mylabris phalerata Palla.

Eleven new monoterpenoids including three 1-methyl cantharimide-type derivatives (1-3), five 1,2-dimethyl cantharimide-type derivatives (4, 5, 7-9), and three 1-hydroxymethyl-2-methyl cantharimide-type derivatives (10-12), together with seven known cantharimides (6, 13-18), were isolated from Mylabis phalerata Palla. The planar structures and absolute configurations of compounds 1-14 were fully elucidated on the basis of spectroscopic analysis, ECD spectra, single-crystal X-ray diffraction analysis, and chemical methods. Compounds 6, 15, 16, and 18 were found to be potent inhibitors of HBV virus, with IC50 values of 62, 42, 58, and 19 µM.

[Chemical constituents from Mylabris phalerata and their cytotoxic activity in vitro].

Ten compounds were isolated from Mylabris phalerata by using preparative HPLC and column chromatography over MCI gel. On the basis of physical-chemical properties, NMR and MS data analysis, the compounds were identified as 5'-[(1 R,2 R,3 S,6R)-1-hydroxymethyl-2-methyl-3,6-epoxycyclohexane-1,2-dicarboximide]- ethyl-2'-methyl-2'-butenoate (1),cantharidin (2), cyclo-(L-Pro-L-Ala) (3), cyclo-(R-Pro-R-Leu) (4), cyclo-(S-Pro-R-Leu) (5), cyclo-(D-Pro-L-Tyr) (6), indole-3-aldehyde (7), 3-indoleacetic acid (8), valerolactam (9), and 4-hydroxyphthalid (10).Compound 1 was a new compound, and compounds 2-10 were obtained from this genus for the first time. Compounds 1-9 were subjected to cytotoxic activity on HCT-116, HepG2, BGC-823, NCI-H1650, A2780 cell lines, and only compound 2 showed inhibitory effect on all cancer cell lines.

ERCC2 polymorphisms and radiation-induced adverse effects on normal tissue: systematic review with meta-analysis and trial sequential analysis.

BACKGROUND: The relationship between ERCC2 polymorphisms and the risk of radiotoxicity remains inconclusive. The aim of our study is to systematically evaluate the association between ERCC2 polymorphisms and the risk of radiotoxicity. METHODS: Publications were identified through a search of the PubMed and Web of Science databases up to August 15, 2015. The pooled odds ratios (ORs) with corresponding 95 % confidence intervals (CIs) were calculated to evaluate the association between ERCC2 polymorphisms and radiotoxicity. Trial sequential analysis (TSA) and power calculation were performed to evaluate the type 1 and type 2 errors. RESULTS: Eleven studies involving 2584 patients were ultimately included in this meta-analysis. Conventional meta-analysis identified a significant association between ERCC2 rs13181 polymorphism and radiotoxicity (OR = 0.71, 95 % CI: 0.55-0.93, P = 0.01), but this association failed to get the confirmation of TSA. CONCLUSIONS: The minor allele of rs13181 polymorphism may confer a protect effect against radiotoxicity. To confirm this correlation at the level of OR = 0.71, an overall information size of approximate 2800 patients were needed.

Distinguishing the strength of electronic coupling for Mo2 -containing mixed-valence compounds within the Class III regime.

Two, symmetrical, mixed-valence (MV), complex cations-{[Mo2 (DAniF)3 ]2 (µ-oxamidate)}(+) (1(+) ) and {Mo2 (DAniF)3 ]2 (µ-dithiooxamidate)}(+) (2(+) ; DAniF=N,N'-di(p-anisyl)formamidinate)-are significantly differentiated in terms of electronic coupling between the two [Mo2 ] units. For 1(+) the intervalence (IV) charge-transfer band in the near-IR spectrum is truncated in half on the low-energy side as predicted for MV compounds at the Class II-III limit (2Hab /λ=1; for which Hab =electronic coupling matrix element and λ=reorganization energy). In contrast, the very strongly coupled analogue 2(+) , as indicated by 2Hab /λ=3.5 (> >1), exhibits a higher energy and more symmetrical IV band. As rare examples, this pair of MV species shows distinct optical behaviors for MV systems crossing the Class III region. Optical analysis and DFT calculations are carried out to elucidate the transformation from vibronic to electronic vertical transition.