Fungal microbiomes are determined by host phylogeny and exhibit widespread associations with the bacterial microbiome.

Interactions between hosts and their resident microbial communities are a fundamental component of fitness for both agents. Though recent research has highlighted the importance of interactions between animals and their bacterial communities, comparative evidence for fungi is lacking, especially in natural populations. Using data from 49 species, we present novel evidence of strong covariation between fungal and bacterial communities across the host phylogeny, indicative of recruitment by hosts for specific suites of microbes. Using co-occurrence networks, we demonstrate marked variation across host taxonomy in patterns of covariation between bacterial and fungal abundances. Host phylogeny drives differences in the overall richness of bacterial and fungal communities, but the effect of diet on richness was only evident in the mammalian gut microbiome. Sample type, tissue storage and DNA extraction method also affected bacterial and fungal community composition, and future studies would benefit from standardized approaches to sample processing. Collectively these data indicate fungal microbiomes may play a key role in host fitness and suggest an urgent need to study multiple agents of the animal microbiome to accurately determine the strength and ecological significance of host-microbe interactions.

Adaptability in stone tool use by wild capuchin monkeys (Sapajus libidinosus).

Capuchin monkeys are well known for population variation in the use of stone tools and the types of food items consumed. In order to determine adaptability in stone tool use, we investigated a never before studied population of wild capuchin monkey (Sapajus libidinosus) displaying terrestrial habits in a Caatinga environment. To carry out this study we recorded physical evidence of the use of stone tools as well as made direct observations through trap cameras. During a 15-month period, we studied a group of Sapajus libidinosus in Serra Talhada, Pernambuco, Brazil. In total, 257 anvils and 395 hammers were identified, characterized, and monitored. We identified five types of food items exploited at these "tool use sites": Syagrus oleracea (catolé palm), Manihot epruinosa (manioc), Pilosocereus pachycladus (facheiro), Tacinga inamoena (quípa), and Commiphora leptophloeos (imburana de cambão). Five hundred three video clips of capuchin monkeys were recorded, 43 of which involved the use of stone tools. The results indicated evidence of adaptability in tool use by the capuchins. We verified that the rigidity and size of the food item, along with the presence or absence of spines seem to influence the choice of stone tools made by the animals for processing the food. The recurring use of tools for the processing of cacti was especially noteworthy and it appears that the presence of spines predisposes the capuchins to use stones to process them. A significant difference was observed between the characteristics of the anvils and the weight of the hammers according to the food item consumed. The use of tools enabled the animals to access otherwise unavailable or difficult to acquire food items within a Caatinga habitat. Adaptability in the use of stone tools by the capuchin monkey population of Serra Talhada provides an example of the complexity that these primates demonstrate in food processing.