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1.
Int J Cardiol ; 230: 327-331, 2017 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-28040275

RESUMEN

INTRODUCTION: Nitric oxide (NO) modulates inflammatory reactions, having beneficial or toxic effects depending on the concentration. Its elevation can cause proinflammatory effects amplifying the inflammatory process with the participation of cytokines. Smoking has a negative impact on health and is considered one of the risk factors that influence disease development facilitating inflammatory processes. AIM: To compare the serum concentration of NO and cytokines in smokers at baseline and after 4months of abstinence treatment. METHODS: Blood samples which were collected to obtain the serum, at baseline and after 4months, were stored at -80°C until analysis. NO was measured by the total dose of nitrite determined by the Greiss method. CBA was the used technique to determine the concentration of cytokines in supernatants serum. The initial and final results of NO, TNF-α, IL-1, IL-6, IL-8, IL-10 and IL-12 that remained after 4months treatment were compared. Wilcoxon test was used to compare the data and Spearman test for correlations between NO and other variables. A significance level of p<0.05 was adopted. RESULTS: The analysis of NO observed a significant reduction (p=0.001) of the initial median value of 18.80 (3.55-80.01) µmol/L to 8.10 (2.85-14.97) µmol/L after 4months of treatment. There were no significant differences in cytokines from baseline to the end of treatment. CONCLUSION: The results may not mean harm to the body, but an adaptive process, decreasing the metabolism of abstinents due to the reduction of the use of nicotine.


Asunto(s)
Citocinas/sangre , Inflamación/sangre , Óxido Nítrico/sangre , Cese del Hábito de Fumar/métodos , Fumar/sangre , Adulto , Anciano , Biomarcadores/sangre , Femenino , Estudios de Seguimiento , Humanos , Inflamación/etiología , Masculino , Persona de Mediana Edad , Fumar/efectos adversos , Factores de Tiempo
2.
Animal ; 9(7): 1221-9, 2015 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-25682711

RESUMEN

Until the turn of the century, farmers in West Africa considered cotton to be the 'white gold' for their livelihoods. Large fluctuations in cotton prices have led farmers to innovate into other business including dairy. Yet the productivity of cows fed traditional diets is very poor, especially during the long dry season. This study combines earlier published results of farmer participatory experiments with simulation modelling to evaluate the lifetime productivity of cows under varying feeding strategies and the resulting economic performance at farm level. We compared the profitability of cotton production to the innovation of dairy. The results show that milk production of the West African Méré breed could be expanded if cows are supplemented and kept stall-fed during the dry season. This option seems to be profitable for better-off farmers, but whether dairy will replace (some of) the role of cotton as the white gold for these smallholder farmers will depend on the cross price elasticity of cotton and milk. Farmers may (partly) replace cotton production for fodder production to produce milk if the price of cotton remains poor (below US$0.35/kg) and the milk price relatively strong (higher than US$0.38/kg). Price ratios need to remain stable over several seasons given the investments required for a change in production strategy. Furthermore, farmers will only seize the opportunity to engage in dairy if marketing infrastructure and milk markets are further developed.


Asunto(s)
Alimentación Animal/análisis , Bovinos/fisiología , Industria Lechera/economía , Industria Lechera/métodos , Leche/química , Modelos Teóricos , Alimentación Animal/economía , Animales , Cruzamiento/métodos , Comercio , Fibra de Algodón/economía , Agricultores , Femenino , Humanos , Malí , Leche/economía
3.
Math Biosci ; 209(2): 608-23, 2007 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-17531272

RESUMEN

In this paper, the yield and the land equivalent ratio (LER) of a silvo-arable agroforestry (SAF) system, containing one tree and one crop species, is analyzed analytically using a minimal mechanistic model describing the system dynamics. Light competition between tree and crop is considered using light extinction functions. The tree leaf area is driven by annual increase in the number of leaf-bearing shoots with a seasonal cycle of bud burst, leaf expansion and senescence. The crop leaf area dynamics is driven by the solar radiation, heat sum and the dry matter allocation to the leaves. As a consequence of this, the model consists of six state equations expressing the temporal dynamics of: (1) tree biomass; (2) tree leaf area; (3) number of shoots per tree; (4) crop biomass; (5) crop leaf area index, and (6) heat sum. The main outputs of the model are the growth dynamics and final yields of trees and crops. Daily inputs are temperature and radiation. Planting densities, initial biomass of tree and crop species and growth parameters must be specified. The main parameters are those describing light interception, conversion to dry matter and leaf area. Given the crop cover and the tree parameters, it is shown that under potential growing conditions the land equivalent ratio can be explicitly expressed in terms of these parameters.


Asunto(s)
Ecosistema , Modelos Biológicos , Agricultura/estadística & datos numéricos , Productos Agrícolas/crecimiento & desarrollo , Agricultura Forestal/estadística & datos numéricos , Matemática , Biología de Sistemas , Teoría de Sistemas , Árboles/crecimiento & desarrollo
4.
J Environ Manage ; 82(3): 363-76, 2007 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-17092629

RESUMEN

Intensive agriculture, characterized by high inputs, has serious implications on the environment. Monitoring and evaluation of projects aiming at designing, testing and applying more sustainable practices require instruments to asses agronomic as well as environmental performance. Guidelines for Good Agricultural Practice (GAP) or Good Farming Practice (GFP) define sustainable practices but give limited insight into their environmental performance. Agri-environmental indicators (AEIs) provide information on environmental as well as agronomic performance, which allows them to serve as analytical instruments in research and provide thresholds for legislation purposes. Effective AEIs are quantifiable and scientifically sound, relevant, acceptable to target groups, easy to interpret and cost-effective. This paper discusses application of four AEIs for nitrogen (N) management in three Dutch research projects: 'De Marke', 'Cows and Opportunities' and 'Farming with a future'. 'De Marke' applied Nitrogen Surplus and Groundwater Nitrate Concentration in the design and testing of environmentally sound dairy systems. 'Cows and Opportunities', testing and disseminating dairy systems designed at 'De Marke', mainly applied Nitrogen Surplus, while 'Farming with a future' used Nitrogen Surplus, Groundwater Nitrate Concentration and Residual Mineral Soil Nitrogen to support arable farmers in complying with Dutch legislation (MINAS). Nitrogen Surplus is quantifiable, appealing and easy to interpret, but lacks scientific soundness or a good relationship with groundwater quality. Nitrogen Use Efficiency is sensitive to changes in management, while Residual Mineral Soil Nitrogen is appealing and cheap, but has difficulties in scaling. Groundwater Nitrate Concentration lacks clear rules for sampling, is labor consuming, expensive and mainly used in combination with other indicators. AEIs enhanced improvements in N management by facilitating (i) definition of project goals, (ii) design of desired systems, (iii) evaluation of applied systems and (iv) improving effective communication. AEI applications in other countries show a similar pattern as found in The Netherlands. Limitations to AEI application relate to inconsistencies between different indicators, heterogeneity of soil characteristics and linkages of N, carbon and water management. AEIs should be applied in an integrated evaluation, at a scale that reflects the farm's spatial variability. Simple AEIs like Nitrogen Surplus should be supported by other indicators and/or model calculations. The paper concludes that AEIs proved their value in design, implementation and testing of farming systems, but they should be used with care, always keeping in mind that indicators are simplifications of complex and variable processes.


Asunto(s)
Agricultura/organización & administración , Conservación de los Recursos Naturales , Monitoreo del Ambiente/métodos , Nitrógeno/normas , Suelo/normas , Animales , Carbono/normas , Bovinos , Países Bajos , Nitratos/normas , Ríos
5.
J Eukaryot Microbiol ; 48(1): 22-6, 2001.
Artículo en Inglés | MEDLINE | ID: mdl-11249189

RESUMEN

Giardia intestinalis trophozoites encyst when they are exposed to bile. During encystment, events related to the inducible synthesis of a novel N-acetyl-D-galactosamine (GalNAc) homopolymer, occur. Within the first 6 h of encystment, mRNA for glucosamine 6-P isomerase (GPI), the first inducible enzyme unique to this pathway appears, oxygen uptake rates double from non-encysting levels, and metronidazole (MTZ) inhibits oxygen uptake. Within 12 h, GPI and its activity are detectable and OU decreases 50% from non-encysting levels; glucose's stimulation and MTZ's inhibition of oxygen uptake cease. In contrast, aspartate uptake remained constant throughout the 40 h monitored. Two genes, gpi 1 and 2 encode for GPI, but only gpi1 is expressed during encystment. Glucosamine 6-P (GlcN6P), the synthetic product of GPI, activates UDP-N-acetylglucosamine (UDP-GlcNAc) pyrophosphorylase, a downstream enzyme, 3 to 5-fold in the direction of UDP-GlcNAc synthesis. UDP-GlcNAc is epimerized to UDP-GalNAc and UDP-GalNAc is polymerized by "cyst wall synthase" (beta 1 --> 3 GalNAc transferase) into a highly insoluble beta 1,3-linked homopolymer. This GalNAc polysaccharide, the major component of cyst wall filaments, forms, in conjunction with polypeptides, the outer cyst wall of Giardia.


Asunto(s)
Acetilgalactosamina/metabolismo , Isomerasas Aldosa-Cetosa/genética , Regulación Enzimológica de la Expresión Génica , Giardia lamblia/crecimiento & desarrollo , Polisacáridos/metabolismo , Acetilgalactosamina/genética , Isomerasas Aldosa-Cetosa/metabolismo , Animales , Conformación de Carbohidratos , Secuencia de Carbohidratos , Genes Protozoarios , Giardia lamblia/genética , Giardia lamblia/metabolismo , Giardiasis/parasitología , Humanos , Datos de Secuencia Molecular
6.
J Eukaryot Microbiol ; 45(6): 637-42, 1998.
Artículo en Inglés | MEDLINE | ID: mdl-9864853

RESUMEN

The biosynthesis of the carbohydrate component of the cyst wall of the protozoan parasite Giardia lamblia, a polymer of N-acetylgalactosamine (GalNac), is by a pathway that is initiated with the conversion of fructose 6-phosphate to glucosamine 6-phosphate by an aminating isomerase, glucose 6-phosphate isomerase. This enzyme appears only after Giardia trophozoites are induced to start the production of cyst wall components after bile is added. To investigate whether induction of glucosamine 6-phosphate isomerase is by protein modification or by transcription activation, its gene was cloned and sequenced. Two genes, gpi1 and gpi2, encoding putative glucosamine 6-phosphate isomerases were identified but one, gpi1 was expressed. The transcript for gpi1 appeared not earlier than 6 h after cells were induced with bile salts. These results show that the first enzyme in the pathway leading to GalNac synthesis in encysting Giardia cyst wall biosynthesis is under transcriptional control.


Asunto(s)
Isomerasas Aldosa-Cetosa/genética , Genes Protozoarios , Giardia lamblia/enzimología , Activación Transcripcional , Isomerasas Aldosa-Cetosa/metabolismo , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Clonación Molecular , ADN Protozoario , Inducción Enzimática , Giardia lamblia/genética , Datos de Secuencia Molecular , Conejos , Homología de Secuencia de Aminoácido
7.
J Parasitol ; 84(2): 294-300, 1998 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-9576501

RESUMEN

The small subunit ribosomal RNA (eukaryotic 16S rRNA) gene from Giardia trophozoites, isolated from 8 different prairie voles and 8 different muskrats, was amplified by the polymerase chain reaction. The 16S rDNA was sequenced in its entirety for 2 prairie vole and 2 muskrat Giardia. In addition, the 5' 500 nucleotides of the 16S rDNA from Giardia isolates from each of 6 voles and 6 muskrats were amplified and sequenced. The results show that Giardia from voles and muskrats are very similar to each other but differ substantially from Giardia isolated from humans. We believe that the Giardia isolate from voles and muskrats constitutes a distinct species, which will be referred to as Giardia microti. These results suggest that both voles and muskrats are parasitized by the same species of Giardia, that this species is different from the Giardia that parasitizes humans, and that voles and muskrats do not contribute to the zoonotic character of human giardiasis.


Asunto(s)
Arvicolinae/parasitología , ADN Ribosómico/química , Giardia/genética , Giardiasis/veterinaria , ARN Ribosómico 16S/genética , Enfermedades de los Roedores/parasitología , Animales , Secuencia de Bases , ADN Protozoario/química , Genotipo , Giardia/clasificación , Giardia/ultraestructura , Giardiasis/parasitología , Microscopía Electrónica/veterinaria , Microscopía Electrónica de Rastreo/veterinaria , Microscopía de Contraste de Fase/veterinaria , Datos de Secuencia Molecular , Filogenia , Reacción en Cadena de la Polimerasa/veterinaria , ARN Protozoario/genética , Alineación de Secuencia/veterinaria
8.
Microsc Microanal ; 4(4): 397-403, 1998 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-9882715

RESUMEN

: The examination of archival pathology specimens of human small intestine by light microscopy, field emission scanning electron microscopy (FESEM), and confocal scanning laser microscopy using fluorescent in situ hybridization (FISH) techniques was undertaken to better understand the epidemiology of Giardia. Giardia trophozoites were tentatively identified in the light microscope after hematoxylin and eosin (H&E) staining. The organisms were adherent to the intestinal epithelium where they were also associated with strands of mucus within the lumen. Fluorochrome-conjugated antisense oligonucleotide probes, developed for the 16S rRNA of Giardia lamblia and Giardia muris, were used in FISH experiments with confocal scanning laser microscopy. Positive identification of trophozoites could be obtained with the G. lamblia probe, but not with the G. muris probe. FESEM examination of serial sections adjacent to FISH-stained sections revealed trophozoites characterized by their morphological features. The 16S rDNA probes specifically distinguished different species of Giardia, but whether multiple infections can occur within an individual host could not be determined.

9.
J Colloid Interface Sci ; 185(1): 119-30, 1997 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-9056315

RESUMEN

Sorption of LiCl, diffusion of Li+ ions, and diffusion of water have been studied as a function of the salt concentration in a synthesized cation-exchange resin bearing sulfonic acid groups. The Li+ diffusion shows a maximum in the salt concentration dependence reflecting on one side the enhanced diffusion due to screening of the fixed charges on the charged matrix and on the other hindered diffusion by shrinking of this matrix. A theoretical analysis is given in which the resin is visualized as being composed of spherical cells with the charged spheres placed in the centers. Also, the phenomenological approach of Glueckauf (4, 5) is applied. The spherical cell model gives a semi-quantitative prediction of the observed sorption and diffusion. The experimental results agree nicely with the semi-empirical power laws of Glueckauf.

10.
J Eukaryot Microbiol ; 43(5): 416-29, 1996.
Artículo en Inglés | MEDLINE | ID: mdl-8822813

RESUMEN

Encystment of the intestinal protozoan, Giardia, is a key step in the life cycle that enables this parasite to be transmitted from host to host via either fecal oral, waterborne, or foodborne transmission. The process of encystment was studied by localizing cyst wall specific antigens with immunofluorescence for light microscopy and immunogold staining for field emission scanning electron microscopy. Chronological sampling of Giardia cultures stimulated with endogenous bile permitted identification of an intracellular and extracellular phase in cyst wall formation, a process which required a total of 14-16 h. The intracellular phase lasted for 8-10 h, while the extracellular phase, involved the appearance of cyst wall antigen on the trophozoite membrane, and the assembly of the filamentous layer, a process requiring an additional 4-6 h for completion of mature cysts. The extracellular phase was initiated with the appearance of cyst wall antigen on small protrusions of the trophozoite membrane (approximately 15 nm), which became enlarged with time to caplike structures ranging up to 100 nm in diameter. Caplike structures involved with filament growth were detected over the entire surface of the trophozoite including the adhesive disc and flagella. Encysting cells rounded up, lost attachment to the substratum, and became enclosed in a layer of filaments. Late stages in encystment included a "tailed" cyst in which flagella were not fully retracted into the cyst. Clusters of cysts were seen in which filaments at the surface of one cyst were connected with the surface of adjacent cysts or the "tailed" processes of adjacent cysts, suggesting that the growth of cyst wall filaments may be at the terminal end. In conclusion, the process of encystment has been shown to consist of two morphologically different stages (intracellular and extracellular) which requires 16 h for completion. Further investigation of the extracellular stage with regard to assembly of the filamentous layer of the cyst wall may lead to innovative methods for interfering with production of an intact functional cyst wall, and thereby, regulation of viable Giardia cyst release from the host.


Asunto(s)
Giardia lamblia/crecimiento & desarrollo , Animales , Técnica del Anticuerpo Fluorescente Indirecta , Giardia lamblia/ultraestructura , Microscopía Electrónica de Transmisión de Rastreo
11.
Appl Environ Microbiol ; 62(8): 2789-97, 1996 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-8702271

RESUMEN

This study was carried out to estimate the prevalence and potential for human infectivity of Giardia cysts in Canadian drinking water supplies. The presence of Cryptosporidium oocysts was also noted, but isolates were not collected for further study. A total of 1,760 raw water samples, treated water samples, and raw sewage samples were collected from 72 municipalities across Canada for analysis, 58 of which treat their water by chlorination alone. Giardia cysts were found in 73% of raw sewage samples, 21% of raw water samples, and 18.2% of treated water samples. There was a trend to higher concentration and more frequent incidence of Giardia cysts in the spring and fall, but positive samples were found in all seasons. Cryptosporidium oocysts were found in 6.1% of raw sewage samples, 4.5% of raw water samples, and 3.5% of treated water samples. Giardia cyst viability was assessed by infecting Mongolian gerbils (Meriones unguiculatus) and by use of a modified propidium iodide dye exclusion test, and the results were not always in agreement. No Cryptosporidium isolates were recovered from gerbils, but 8 of 276 (3%) water samples and 19 of 113 (17%) sewage samples resulted in positive Giardia infections. Most of the water samples contained a low number of cysts, and 12 Giardia isolates were successfully recovered from gerbils and cultured. Biotyping of these isolates by isoenzyme analysis and karyotyping by pulsed-field gel electrophoresis separated the isolates into the same three discrete groups. Karyotyping revealed four or five chromosomal bands ranging in size from 0.9 to 2 Mb, and four of the isolates had the same banding pattern as that of the WB strain. Analysis of the nucleotide sequences of the 16S DNA coding for rRNA divided the isolates into two distinct groups corresponding to the Polish and Belgian designations found by other investigators. The occurrence of these biotypes and karyotypes appeared to be random and was not related to geographic or other factors (e.g., different types were found in both drinking water and sewage from the same community). Biotyping and karyotyping showed that isolates from this study were genetically and biochemically similar to those found elsewhere, including well-described human source strains such as WB. We conclude that potentially human-infective Giardia cysts are commonly found in raw surface waters and sewage in Canada, although cyst viability is frequently low. Cryptosporidium oocysts are less common in Canada. An action level of three to five Giardia cysts per 100 liters in treated drinking water is proposed on the basis of the monitoring data from outbreak situations. This action level is lower than that proposed by Haas and Rose (C. N. Haas and J. B. Rose, J. Am. Water Works Assoc. 87(9):81-84, 1995) for Cryptosporidium spp. (10 to 30 oocysts per 100 liters).


Asunto(s)
Cryptosporidium/aislamiento & purificación , Giardia/aislamiento & purificación , Abastecimiento de Agua , Agua/parasitología , Animales , Secuencia de Bases , Canadá/epidemiología , Electroforesis en Gel de Campo Pulsado , Gerbillinae , Giardiasis/epidemiología , Humanos , Datos de Secuencia Molecular , Reacción en Cadena de la Polimerasa , Prevalencia , Aguas del Alcantarillado
12.
J Eukaryot Microbiol ; 42(4): 392-4, 1995.
Artículo en Inglés | MEDLINE | ID: mdl-7620463

RESUMEN

The nucleotide sequence of the 16S rRNA gene and the space DNA region was determined for Giardia duodenalis, obtained from humans in The Netherlands (AMC-4) and Washington State (CM). These rDNA sequences differ from other G. duodenalis isolates (Portland-1 and BRIS/83/HEPU/ 106) both of which have virtually identical rDNA sequences. The most characteristic feature was found close to the 5' end of the 16S rRNA. The Portland-1 -Bris/83/HEPU/ 106 type has GCG in position 22-24, while AMC-4 and CM have AUC in this position. These two sequences, present in an otherwise conserved region of the 16S rRNA, are "signature" sequences, which divide Giardia isolates into two different groups.


Asunto(s)
ADN Ribosómico/genética , Genes Protozoarios , Giardia/genética , ARN Ribosómico 16S/genética , Animales , Secuencia de Bases , Bélgica , Clonación Molecular , Secuencia Conservada , Cartilla de ADN , ADN Protozoario/genética , Genotipo , Giardia/clasificación , Giardia/aislamiento & purificación , Humanos , Datos de Secuencia Molecular , Países Bajos , Polonia , Reacción en Cadena de la Polimerasa , ARN Ribosómico 16S/química , Homología de Secuencia de Ácido Nucleico , Washingtón
13.
FASEB J ; 7(1): 223-31, 1993 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-8422968

RESUMEN

Complete small-subunit rRNA (SSU-rRNA) coding region sequences were determined for two species of the intestinal parasite Giardia: G. ardeae and G. muris, both belonging to the order Diplomonadida, and a free-living member of this order, Hexamita sp. These sequences were compared to published SSU-rDNA sequences from a third member of the genus Giardia, G. duodenalis (often called G. intestinalis or G. lamblia) and various representative organisms from other taxa. Of the three Giardia sequences analyzed, the SSU-rRNA from G. muris is the smallest (1432 bases as compared to 1435 and 1453 for G. ardeae and G. duodenalis, respectively) and has the lowest G+C content (58.9%). The Hexamita SSU-rRNA is the largest in this group, containing 1550 bases. Because the sizes of the SSU-rRNA are prokaryotic rather than typically eukaryotic, the secondary structures of the SSU-rRNAs were constructed. These structures show a number of typically eukaryotic signature sequences. Sequence alignments based on constraints imposed by secondary structure were used for construction of a phylogenetic tree for these four taxa. The results show that of the four diplomonads represented, the Giardia species form a distinct group. The other diplomonad Hexamita and the microsporidium Vairimorpha necatrix appear to be distinct from Giardia.


Asunto(s)
ADN Ribosómico/genética , Diplomonadida/clasificación , Filogenia , ARN Ribosómico 18S/genética , Animales , Secuencia de Bases , ADN Ribosómico/clasificación , Diplomonadida/genética , Giardia/clasificación , Giardia/genética , Datos de Secuencia Molecular , Conformación de Ácido Nucleico , ARN Ribosómico 18S/clasificación , Análisis de Secuencia de ADN , Homología de Secuencia de Ácido Nucleico
14.
J Mol Evol ; 35(4): 318-28, 1992 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-1404417

RESUMEN

The total nucleotide sequence of the rDNA of Giardia muris, an intestinal protozoan parasite of rodents, has been determined. The repeat unit is 7668 basepairs (bp) in size and consists of a spacer of 3314 bp, a small-subunit rRNA (SSU-rRNA) gene of 1429, and a large-subunit rRNA (LSU-rRNA) gene of 2698 bp. The spacer contains long direct repeats and is heterogeneous in size. The LSU-rRNA of G. muris was compared to that of the human intestinal parasite Giardia duodenalis, to the bird parasite Giardia ardeae, and to that of Escherichia coli. The LSU-rRNA has a size comparable to the 23S rRNA of E. coli but shows structural features typical for eukaryotes. Some variable regions are typically small and account for the overall smaller size of this rRNA. The structure of the G. muris LSU-rRNA is similar to that of the other Giardia rRNA, but each rRNA has characteristic features residing in a number of variable regions.


Asunto(s)
ADN Ribosómico/genética , Giardia/genética , Operón/genética , ARN Protozoario/genética , ARN Ribosómico/genética , Animales , Secuencia de Bases , Southern Blotting , ADN Protozoario/genética , Datos de Secuencia Molecular , Conformación de Ácido Nucleico
15.
Mol Biochem Parasitol ; 54(1): 73-86, 1992 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-1518534

RESUMEN

A sensitive and specific polymerase chain reaction-based assay has been developed to detect and analyze polymorphism in the Giardia lamblia 18S ribosomal RNA gene. Efficient amplification required the inclusion of cosolvents (glycerol and dimethyl sulfoxide) in the reaction. Following the optimization of conditions for amplification and subsequent hybridization of amplified product with radiolabeled oligonucleotide probe, a detection limit of less than one organism's worth of DNA was achieved. Thirty-five different G. lamblia strains obtained from various human and animal host types and geographic locations were analyzed by this method. The strains could be divided into 3 groups on the basis of defined nucleotide substitutions within the 183-bp amplified DNA fragment of the 18S ribosomal RNA gene. The groupings based upon the 18S ribosomal RNA gene sequence correlated with groupings previously assigned based upon patterns of surface antigens and restriction enzyme analysis. Analysis of the G. lamblia 18S ribosomal RNA gene sequences present in fecal specimens obtained from giardiasis patients revealed the presence of the different sequence types in these specimens. Some specimens contained more than one sequence type. The identification of subgroups of G. lamblia may facilitate studies of virulence, infectivity, and the epidemiology of giardia infection.


Asunto(s)
ADN Protozoario/genética , Giardia lamblia/clasificación , ARN Protozoario/genética , ARN Ribosómico 18S/genética , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Aves , Gatos , Perros , Heces/parasitología , Giardia lamblia/genética , Giardia lamblia/aislamiento & purificación , Cobayas , Humanos , Ratones , Datos de Secuencia Molecular , Reacción en Cadena de la Polimerasa , Polimorfismo Genético , Roedores , Sensibilidad y Especificidad , Ovinos
17.
Mol Biochem Parasitol ; 46(2): 275-84, 1991 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-1922199

RESUMEN

In an attempt to study Giardia at the DNA sequence level, the rRNA genes of three species, Giardia duodenalis, Giardia ardeae and Giardia muris were cloned and restriction enzyme maps were constructed. The rDNA repeats of these Giardia show completely different restriction enzyme recognition patterns. The size of the rDNA repeat ranges from approximately 5.6 kb in G. duodenalis to 7.6 kb in both G. muris and G. ardeae. These size differences are mainly attributable to the variation in length of the spacer. Minor differences exist among these Giardia in the sizes of their small subunit rRNA and the internal transcribed spacer between small and large subunit rRNA. The genetic maps were constructed by sequence analysis of the DNA around the 5' and 3' ends of the mature rRNA genes and between the rRNA covering the 5.8S rRNA gene and internal transcribed spacer. Comparison of the 5.8S rDNA and 3' end of large subunit rDNA from these three Giardia species showed considerable sequence variation, but the rDNA sequences of G. duodenalis and G. ardeae appear more closely related to each other than to G. muris.


Asunto(s)
ADN Ribosómico/genética , ADN Ribosómico/inmunología , Giardia/genética , ARN Ribosómico/genética , Mapeo Restrictivo , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Southern Blotting , Clonación Molecular/métodos , ADN Protozoario/genética , Datos de Secuencia Molecular , Conformación de Ácido Nucleico , Hibridación de Ácido Nucleico , ARN Protozoario/genética , Homología de Secuencia de Ácido Nucleico
18.
Mol Biochem Parasitol ; 45(2): 205-14, 1991 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-2038356

RESUMEN

We have analyzed 572 bp in the 28S rDNA of the human blood fluke Schistosoma mansoni which correspond to expansion segment 5 of domain IV as defined by Clark et al. for the Xenopus laevis 28S rRNA. S1 nuclease mapping and primer extension analysis comparing this region with the mature 28S rRNA indicate that there are 54 nucleotides present in the 28S rDNA which are absent from the mature rRNA. This defines a gap that creates two 28S rRNA subunits (28S alpha and 28S beta). Comparison of the S. mansoni sequence with rDNAs of other organisms which contain gaps in their 28S rRNA shows that the overall features are conserved except that the S. mansoni gap is less A + T-rich. The conserved features include: (1) the location of the gap within the 28S rRNA; (2) the predicted secondary structure of the gap, containing a stem-loop with a UAAU sequence within the loop; and (3) a conserved CGAAAGGG on the 3' side of the gap.


Asunto(s)
ADN Ribosómico/genética , ARN Ribosómico 28S/genética , Schistosoma mansoni/genética , Animales , Secuencia de Bases , Clonación Molecular , ADN de Cadena Simple/genética , Biblioteca de Genes , Datos de Secuencia Molecular , Conformación de Ácido Nucleico , ARN Ribosómico 28S/metabolismo , Mapeo Restrictivo
19.
Exp Parasitol ; 71(4): 470-82, 1990 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-2226707

RESUMEN

Species in the genus Giardia have been named on the basis of host specificity, cell dimensions, and median body morphology. Despite these criteria, the species taxonomy of Giardia is still in question. To investigate Giardia taxonomy on a molecular level, Giardia chromosomal DNA was analyzed by orthogonal-field-alternation gel electrophoresis (OFAGE) and transverse alternating field electrophoresis (TAFE). Chromosomal DNA of G. duodenalis isolates (human, muskrat, sheep, dog, beaver), G. muris (mouse), and G. ardeae (great blue heron) were subjected to OFAGE and TAFE analyses. Comparable DNA patterns were obtained by both electrophoretic methods, but OFAGE required 8 days while TAFE required only 3 days. DNA patterns among all G. duodenalis isolates, although quite similar to each other, were distinctly different from those of G. muris and G. ardeae; G. muris and G. ardeae DNA patterns were distinctly different from each other. A G. duodenalis (Portland 1) total DNA probe hybridized to the DNA of all G. duodenalis isolates on Southern blots, but not detectably to G. muris and G. ardeae DNA. Similarly, G. muris and G. ardeae total DNA probes only hybridized detectably to their respective DNA. One probe that appears to hybridize to the DNA of all G. duodenalis and to G. ardeae DNA rather than G. muris DNA has been developed. Another probe that hybridizes only to G. muris and G. ardeae DNA has been developed. These data suggest that the differentiation of Giardia isolated from host and environmental samples may eventually be accomplished by DNA probes. Additionally, these techniques perhaps combined with other criteria may lead to the establishment of a sound taxonomic scheme for this genus.


Asunto(s)
ADN Protozoario/análisis , Giardia/clasificación , Animales , Aves , Sondas de ADN , Electroforesis en Gel de Agar , Giardia/genética , Giardia/ultraestructura , Humanos , Cariotipificación , Ratones , Microscopía Electrónica de Rastreo , Hibridación de Ácido Nucleico
20.
J Parasitol ; 76(5): 717-24, 1990 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-2213415

RESUMEN

Trophozoites of Giardia ardeae were obtained from the great blue heron (Ardea herodias) and established in axenic culture using the TYI-S-33 medium. The generation time in culture for G. ardeae was 22-25 hr, which was 3-fold longer than for Giardia duodenalis (WB strain). A morphological comparison of trophozoites in the original intestinal isolate to those grown in culture revealed that they were identical for the following characteristics: a pyriform-shaped body, a ventral adhesive disc with a deep notch in the posterior border, teardrop-shaped nuclei, pleomorphism in median body structure ranging from a round-oval appearance (Giardia muris type) to that of a clawhammer (G. duodenalis type), and a single caudal flagellum on the right side (as viewed dorsally) with the left one being rudimentary. Analysis of the chromosomal migration patterns was performed by orthogonal-field-alternation gel electrophoresis and demonstrated that the pattern for G. ardeae was distinctly different from that for G. duodenalis (Portland 1-CCW strain). Bacterial symbionts were seen attached to trophozoites in the original isolate but could not be detected in cultured trophozoites using scanning electron microscopy, fluorescence light microscopy using the Hoechst 33258 dye for DNA localization, or by standard microbiological techniques using nonselective media for growing aerobic or anaerobic bacteria. This study demonstrated that avian-derived Giardia could be grown in axenic culture; based on morphological criteria and chromosomal migration patterns, that G. ardeae should be considered a distinct species; and that rationale for determining Giardia spp., based on median body structure alone, should no longer be considered adequate for classification at the species level.


Asunto(s)
Enfermedades de las Aves/parasitología , Giardia/crecimiento & desarrollo , Giardiasis/veterinaria , Animales , Aves , Giardia/ultraestructura , Giardiasis/parasitología , Humanos , Microscopía Electrónica de Rastreo
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