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1.
J Nat Prod ; 86(6): 1620-1631, 2023 06 23.
Artículo en Inglés | MEDLINE | ID: mdl-37308446

RESUMEN

Fungal metabolites represent an underutilized resource in the development of novel anticancer drugs. This review will focus on the promising fungal nephrotoxin orellanine, found in mushrooms including Cortinarius orellanus (Fools webcap). Emphasis will be placed on its historical significance, structural features, and associated toxicomechanics. Chromatographic methods for analysis of the compound and its metabolites, its synthesis, and chemotherapeutic potential are also discussed. Although orellanine's exceptional selectivity for proximal tubular cells is well documented, the mechanics of its toxicity in kidney tissue remains disputed. Here, the most commonly proposed hypotheses are detailed in the context of the molecule's structure, the symptoms seen following ingestion, and its characteristic prolonged latency period. Chromatographic analysis of orellanine and its related substances remains challenging, while biological evaluation of the compound is complicated by uncertainty regarding the role of active metabolites. This has limited efforts to structurally refine the molecule; despite numerous established methods for its synthesis, there is minimal published material on how orellanine's structure might be optimized for therapeutic use. Despite these obstacles, orellanine has generated promising data in preclinical studies of metastatic clear cell renal cell carcinoma, leading to the early 2022 announcement of phase I/II trials in humans.


Asunto(s)
Agaricales , Micotoxinas , Neoplasias , Humanos , Micotoxinas/análisis , Neoplasias/tratamiento farmacológico , 2,2'-Dipiridil/química , 2,2'-Dipiridil/metabolismo , 2,2'-Dipiridil/toxicidad , Agaricales/metabolismo
2.
Microbiol Spectr ; 11(3): e0013023, 2023 06 15.
Artículo en Inglés | MEDLINE | ID: mdl-37093006

RESUMEN

Eicosapentaenoic acid (EPA) is an omega-3 long-chain polyunsaturated fatty acid (PUFA) essential for human health. Schizochytrium is a marine eukaryote that has been widely utilized for the synthesis of PUFAs. The current low potency and performance of EPA production by fermentation of Schizochytrium spp. limits its prospect in commercial production of EPA. Since the synthesis pathway of EPA in Schizochytrium spp. is still unclear, mutagenesis combined with efficient screening methods are still desirable. In this study, a novel screening strategy was developed based on a two-step progressive mutagenesis method based on atmospheric and room temperature plasma (ARTP) and diethyl sulfate (DES) after multiple stresses (sethoxydim, triclosan and 2,2'-bipyridine) compound screening. Finally, the mutant strain DBT-64 with increased lipid (1.57-fold, 31.71 g/L) and EPA (5.64-fold, 1.86 g/L) production was screened from wild-type (W) strains; the docosahexaenoic acid (DHA) content of mutant DBT-64 (M) was 11.41% lower than that of wild-type strains. Comparative transcriptomic analysis showed that the expression of genes related to the polyketide synthase, fatty acid prolongation, and triglyceride synthesis pathways was significantly upregulated in the mutant strain, while the expression of genes involved in the ß-oxidation pathway and fatty acid degradation pathway was downregulated in favor of EPA biosynthesis in Schizochytrium. This study provides an effective strain improvement method to enhance EPA accumulation in Schizochytrium spp. IMPORTANCE Schizochytrium, a marine eukaryotic microorganism, has emerged as a candidate for the commercial production of PUFAs. EPA is an omega-3 PUFA with preventive and therapeutic effects against cardiovascular diseases, schizophrenia, and other disorders. Currently, the low potency and performance of EPA production by Schizochytrium spp. limits its commercialization. In this study, we performed two-step progressive mutagenesis based on ARTP and DES and screened multiple stresses (sethoxydim, triclosan, and 2,2'-bipyridine) to obtain the EPA-high-yielding Schizochytrium mutant. In addition, high expression of the polyketide synthase pathway, fatty acid elongation pathway, and triglyceride synthesis pathway in the mutants was confirmed by transcriptomic analysis. Therefore, the multistress screening platform established in this study is important for breeding EPA-producing Schizochytrium spp. and provides valuable information for regulating the proportion of EPA in microalgal lipids by means of genetic engineering.


Asunto(s)
Estramenopilos , Triclosán , Humanos , Ácido Eicosapentaenoico/metabolismo , Sintasas Poliquetidas/metabolismo , 2,2'-Dipiridil/metabolismo , Triclosán/metabolismo , Estramenopilos/genética , Estramenopilos/metabolismo , Ácidos Grasos Insaturados/metabolismo , Ácidos Grasos/metabolismo , Perfilación de la Expresión Génica , Triglicéridos/metabolismo
3.
Nat Commun ; 12(1): 3124, 2021 05 25.
Artículo en Inglés | MEDLINE | ID: mdl-34035275

RESUMEN

Linear nonribosomal peptide synthetases (NRPSs) and polyketide synthases (PKSs) template the modular biosynthesis of numerous nonribosomal peptides, polyketides and their hybrids through assembly line chemistry. This chemistry can be complex and highly varied, and thus challenges our understanding in NRPS and PKS-programmed, diverse biosynthetic processes using amino acid and carboxylate building blocks. Here, we report that caerulomycin and collismycin peptide-polyketide hybrid antibiotics share an assembly line that involves unusual NRPS activity to engage a trans-acting flavoprotein in C-C bond formation and heterocyclization during 2,2'-bipyridine formation. Simultaneously, this assembly line provides dethiolated and thiolated 2,2'-bipyridine intermediates through differential treatment of the sulfhydryl group arising from L-cysteine incorporation. Subsequent L-leucine extension, which does not contribute any atoms to either caerulomycins or collismycins, plays a key role in sulfur fate determination by selectively advancing one of the two 2,2'-bipyridine intermediates down a path to the final products with or without sulfur decoration. These findings further the appreciation of assembly line chemistry and will facilitate the development of related molecules using synthetic biology approaches.


Asunto(s)
2,2'-Dipiridil/análogos & derivados , 2,2'-Dipiridil/química , Flavoproteínas/química , 2,2'-Dipiridil/síntesis química , 2,2'-Dipiridil/metabolismo , Antibacterianos/química , Antibacterianos/metabolismo , Cisteína/química , Cisteína/metabolismo , Flavoproteínas/metabolismo , Compuestos Heterocíclicos/química , Compuestos Heterocíclicos/metabolismo , Modelos Químicos , Estructura Molecular , Péptido Sintasas/metabolismo , Péptidos/química , Péptidos/metabolismo , Sintasas Poliquetidas/metabolismo , Policétidos/química , Policétidos/metabolismo , Compuestos de Sulfhidrilo/química , Compuestos de Sulfhidrilo/metabolismo
4.
Sci Rep ; 9(1): 6228, 2019 04 17.
Artículo en Inglés | MEDLINE | ID: mdl-30996325

RESUMEN

After intracranial hemorrhage (ICH), iron is released from the hematoma and induces secondary brain injury. However, the detail effect of iron on blood-brain barrier (BBB) function is still unknown. We investigated whether hemoglobin (Hb), ferrous ammonium sulfate (FAS) or hemin which contains iron have the detrimental effect on both human brain microvascular endothelial cells and pericytes by cellular function analysis in vitro. We developed an iron (Fe2+)-detectable probe, Si-RhoNox-1, to investigate intracellular Fe2+ accumulation (Fe2+intra). After FAS treatment, there was the correlation between Fe2+intra and cell death. Moreover, Hb or hemin treatment induced cell death, increased reactive oxygen species and promoted Fe2+intra in both cells. These changes were inhibited by the Fe2+ chelator, 2,2'-bipyridil (BP). Furthermore, hemin induced endothelial barrier dysfunction via disruption of junction integrity. Based on in vitro studies, we used a hemin-injection ICH mice model in vivo. Hemin injection (10 mM/10 µL, i.c.) induced deleterious effects including BBB hyper-permeability, neuronal deficits, neuronal damage, altered proteins expression, and Fe2+intra in BBB composed cells. Lastly, BP (40 mg/kg, i.p.) administration attenuated neuronal deficits at 3 days after surgery. Collectively, Hb or hemin damaged BBB composed cells via Fe2+intra. Therefore, the regulation of the Fe2+ movement in BBB might be effective for treatment of ICH.


Asunto(s)
Barrera Hematoencefálica/metabolismo , Lesiones Encefálicas/etiología , Lesiones Encefálicas/metabolismo , Células Endoteliales/metabolismo , Espacio Intracelular/metabolismo , Hemorragias Intracraneales/complicaciones , Hierro/metabolismo , Pericitos/metabolismo , 2,2'-Dipiridil/metabolismo , 2,2'-Dipiridil/farmacología , Animales , Apoptosis/efectos de los fármacos , Permeabilidad Capilar/efectos de los fármacos , Supervivencia Celular/efectos de los fármacos , Células Cultivadas , Modelos Animales de Enfermedad , Endotelio Vascular/citología , Compuestos Ferrosos/metabolismo , Compuestos Ferrosos/farmacología , Hematoma/metabolismo , Hematoma/fisiopatología , Hemina/metabolismo , Hemina/farmacología , Hemoglobinas/metabolismo , Hemoglobinas/farmacología , Humanos , Masculino , Ratones , Compuestos de Amonio Cuaternario/metabolismo , Compuestos de Amonio Cuaternario/farmacología
5.
Chembiochem ; 19(20): 2233-2240, 2018 10 18.
Artículo en Inglés | MEDLINE | ID: mdl-30070000

RESUMEN

Interactions of copper(II)-bipyridine cofactors and thioanisole substrate with human telomeric G-quadruplex DNA were studied by UV/Vis absorption, circular dichroism, and fluorescence quenching titration. Three copper(II)-bipyridine complexes are equivalently anchored to the G-quadruplex scaffold at all five fluorescently labeled sites. Thioanisole interacts with the DNA architecture at both the second loop and 3' terminus in the absence or presence of copper(II)-bipyridine complexes. These nonspecificities in the weak interactions of CuII complexes and thioanisole with G-quadruplex might explain why DNA only affords a modest enantioselectivity in the oxidation of thioanisole. These findings provide insights toward the construction of highly enantioselective DNA-based catalysts.


Asunto(s)
2,2'-Dipiridil , Complejos de Coordinación/química , Cobre , ADN , Sulfuros , 2,2'-Dipiridil/química , 2,2'-Dipiridil/metabolismo , Catálisis , Dicroismo Circular/métodos , Cobre/química , Cobre/metabolismo , ADN/química , ADN/metabolismo , G-Cuádruplex , Humanos , Oxidación-Reducción , Espectrometría de Fluorescencia/métodos , Especificidad por Sustrato , Sulfuros/química , Sulfuros/metabolismo , Telómero
6.
J Vis Exp ; (137)2018 07 26.
Artículo en Inglés | MEDLINE | ID: mdl-30102273

RESUMEN

Disaccharide nucleosides, which consist of disaccharide and nucleobase moieties, have been known as a valuable group of natural products having multifarious bioactivities. Although chemical O-glycosylation is a commonly beneficial strategy to synthesize disaccharide nucleosides, the preparation of substrates such as glycosyl donors and acceptors requires tedious protecting group manipulations and a purification at each synthetic step. Meanwhile, several research groups have reported that boronic and borinic esters serve as a protecting or activating group of carbohydrate derivatives to achieve the regio- and/or stereoselective acylation, alkylation, silylation, and glycosylation. In this article, we demonstrate the procedure for the regioselective O-glycosylation of unprotected ribonucleosides utilizing boronic acid. The esterification of 2',3'-diol of ribonucleosides with boronic acid makes the temporary protection of diol, and, following O-glycosylation with a glycosyl donor in the presence of p-toluenesulfenyl chloride and silver triflate, permits the regioselective reaction of the 5'-hydroxyl group to afford the disaccharide nucleosides. This method could be applied to various nucleosides, such as guanosine, adenosine, cytidine, uridine, 5-metyluridine, and 5-fluorouridine. This article and the accompanying video represent useful (visual) information for the O-glycosylation of unprotected nucleosides and their analogs for the synthesis of not only disaccharide nucleosides, but also a variety of biologically relevant derivatives.


Asunto(s)
2,2'-Dipiridil/análogos & derivados , Boro/química , Nucleósidos/metabolismo , 2,2'-Dipiridil/metabolismo , Glicosilación
7.
J Inorg Biochem ; 177: 412-422, 2017 12.
Artículo en Inglés | MEDLINE | ID: mdl-28939002

RESUMEN

We report the synthesis and characterization of three cyclometalated iridium(III) polypyridine complexes containing a 2,4-dinitrophenyl ether moiety [Ir(pq)2(N^N)](PF6) (Hpq=2-phenylquinoline; N^N=4-(N-(4-(2,4-dinitrophenoxy)benzyloxy)carbonyl)aminomethyl-4'-methyl-2,2'-bipyridine (bpy-dinitro-1) (1a), 4-(2,4-dinitrophenoxy)methyl-4'-methyl-2,2'-bipyridine (bpy-dinitro-2) (2a), 4-(4-(2,4-dinitrophenoxy)phenyl)-2,2'-bipyridine (bpy-dinitro-3) (3a)) as intracellular sensors for biothiols. Due to the quenching effect of the dinitroaromatic moiety, these complexes were extremely weakly emissive. Upon the reaction with biothiols, however, the emission was turned on as a consequence of the departure of the quenching unit. The results from a range of experiments demonstrated that complex 1a was noncytotoxic under the conditions used for confocal imaging, showed facile cellular uptake, and can serve as a phosphorogenic intracellular sensor for biothiols including glutathione (GSH) and hydrogen sulfide.


Asunto(s)
2,2'-Dipiridil/análogos & derivados , 2,2'-Dipiridil/química , Complejos de Coordinación/química , Colorantes Fluorescentes/química , Iridio/química , Compuestos de Sulfhidrilo/análisis , 2,2'-Dipiridil/metabolismo , 2,2'-Dipiridil/toxicidad , Complejos de Coordinación/síntesis química , Complejos de Coordinación/metabolismo , Complejos de Coordinación/toxicidad , Cisteína/análisis , Colorantes Fluorescentes/síntesis química , Colorantes Fluorescentes/metabolismo , Colorantes Fluorescentes/toxicidad , Glutatión/análisis , Células HeLa , Humanos , Ligandos , Éteres Fenílicos/síntesis química , Éteres Fenílicos/química , Éteres Fenílicos/metabolismo , Éteres Fenílicos/toxicidad , Sulfuros/análisis
8.
Biochemistry ; 56(28): 3632-3646, 2017 07 18.
Artículo en Inglés | MEDLINE | ID: mdl-28640600

RESUMEN

During catalysis by liver alcohol dehydrogenase (ADH), a water bound to the catalytic zinc is replaced by the oxygen of the substrates. The mechanism might involve a pentacoordinated zinc or a double-displacement reaction with participation by a nearby glutamate residue, as suggested by studies of human ADH3, yeast ADH1, and some other tetrameric ADHs. Zinc coordination and participation of water in the enzyme mechanism were investigated by X-ray crystallography. The apoenzyme and its complex with adenosine 5'-diphosphoribose have an open protein conformation with the catalytic zinc in one position, tetracoordinated by Cys-46, His-67, Cys-174, and a water molecule. The bidentate chelators 2,2'-bipyridine and 1,10-phenanthroline displace the water and form a pentacoordinated zinc. The enzyme-NADH complex has a closed conformation similar to that of ternary complexes with coenzyme and substrate analogues; the coordination of the catalytic zinc is similar to that found in the apoenzyme, except that a minor, alternative position for the catalytic zinc is ∼1.3 Šfrom the major position and closer to Glu-68, which could form the alternative coordination to the catalytic zinc. Complexes with NADH and N-1-methylhexylformamide or N-benzylformamide (or with NAD+ and fluoro alcohols) have the classical tetracoordinated zinc, and no water is bound to the zinc or the nicotinamide rings. The major forms of the enzyme in the mechanism have a tetracoordinated zinc, where the carboxylate group of Glu-68 could participate in the exchange of water and substrates on the zinc. Hydride transfer in the Michaelis complexes does not involve a nearby water.


Asunto(s)
Alcohol Deshidrogenasa/metabolismo , Hígado/enzimología , Zinc/metabolismo , 2,2'-Dipiridil/metabolismo , Adenosina Difosfato Ribosa/metabolismo , Alcohol Deshidrogenasa/química , Animales , Dominio Catalítico , Cristalografía por Rayos X , Formamidas/metabolismo , Caballos , Cinética , Hígado/metabolismo , Modelos Moleculares , NAD/metabolismo , Fenantrolinas/metabolismo , Unión Proteica , Conformación Proteica , Agua/química , Agua/metabolismo , Zinc/química
9.
Biochemistry ; 55(23): 3224-33, 2016 06 14.
Artículo en Inglés | MEDLINE | ID: mdl-27183028

RESUMEN

Collagen is the most abundant protein in animals. The posttranslational hydroxylation of proline residues in collagen contributes greatly to its conformational stability. Deficient hydroxylation is associated with a variety of disease states, including scurvy. The hydroxylation of proline residues in collagen is catalyzed by an Fe(II)- and α-ketoglutarate-dependent dioxygenase, collagen prolyl 4-hydroxylase (CP4H). CP4H has long been known to suffer oxidative inactivation during catalysis, and the cofactor ascorbate (vitamin C) is required to reactivate the enzyme by reducing its iron center from Fe(III) to Fe(II). Herein, we report on the discovery of the first synthetic activators of CP4H. Specifically, we find that 2,2'-bipyridine-4-carboxylate and 2,2'-bipyridine-5-carboxylate serve as ligands for the iron center in human CP4H that enhance the rate of ascorbate-dependent reactivation. This new mode of CP4H activation is available to other biheteroaryl compounds but does not necessarily extend to other prolyl 4-hydroxylases. As collagen is weakened in many indications, analogous activators of CP4H could have therapeutic benefits.


Asunto(s)
2,2'-Dipiridil/metabolismo , Ácido Ascórbico/metabolismo , Hierro/metabolismo , Prolina/metabolismo , Prolil Hidroxilasas/metabolismo , 2,2'-Dipiridil/química , Catálisis , Dominio Catalítico , Humanos , Hidroxilación , Cinética , Ligandos , Prolina/química
10.
Anal Bioanal Chem ; 408(25): 7067-75, 2016 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-26939670

RESUMEN

A simple and sensitive electrogenerated chemiluminescence biosensor was developed to monitor matrix metalloproteinase 2 (MMP-2) by employing a specific peptide (CGPLGVRGK) as a molecular recognition substrate. Bis(2,2'-bipyridine)-4'-methyl-4-carboxybipyridine-ruthenium N-succinimidyl ester-bis(hexafluorophosphate) (Ru(bpy)2(mcbpy-O-Su-ester)(PF6)2 (Ru1) was used as ECL-emitting species and covalently labeled onto the peptide through NH2-containing lysine on the peptide via acylation reaction to form Ru1-peptide as an ECL probe. An ECL peptide-based biosensor was fabricated by self-assembling the ECL probe onto the surface of gold electrode. MMP-2 can specifically cleave the Ru1-peptide on the electrode surface, which led the partly Ru1-peptide to leave the electrode surface and resulted in the decrease of the ECL intensity obtained from the resulted electrode in 0.1 M phosphate-buffered saline (pH 7.4) containing tri-n-propylamine. The decreased ECL intensity was piecewise linear to the concentration of MMP-2 in the range from 1 to 500 ng/mL. Moreover, the ECL biosensor is successfully applied to detection of MMP-2 secreted by living cell, such as HeLa cells. Additionally, the biosensor was also applied to the evaluation of matrix metalloproteinase inhibitors. The strategy presented here is promising for other disease-related matrix metalloproteinase assay and matrix metalloproteinase inhibitor profiling with sensitivity and simplicity. Graphical Abstract Detection of MMP-2 released from living cells by ECL peptide-based biosensor.


Asunto(s)
Técnicas Biosensibles/métodos , Sustancias Luminiscentes/química , Mediciones Luminiscentes/métodos , Metaloproteinasa 2 de la Matriz/análisis , Péptidos/química , 2,2'-Dipiridil/análogos & derivados , 2,2'-Dipiridil/química , 2,2'-Dipiridil/metabolismo , Electrodos , Pruebas de Enzimas/métodos , Oro/química , Células HeLa , Humanos , Sustancias Luminiscentes/metabolismo , Metaloproteinasa 2 de la Matriz/metabolismo , Compuestos Organometálicos/química , Compuestos Organometálicos/metabolismo , Péptidos/metabolismo , Especificidad por Sustrato
11.
ACS Chem Biol ; 11(4): 943-52, 2016 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-26714051

RESUMEN

Caerulomycin A (CRM A 1) belongs to a family of natural products containing a 2,2'-bipyridyl ring core structure and is currently under development as a potent novel immunosuppressive agent. Herein, we report the functional characterization, kinetic analysis, substrate specificity, and structure insights of an aminotransferase CrmG in 1 biosynthesis. The aminotransferase CrmG was confirmed to catalyze a key transamination reaction to convert an aldehyde group to an amino group in the 1 biosynthetic pathway, preferring l-glutamate and l-glutamine as the amino donor substrates. The crystal structures of CrmG in complex with the cofactor 5'-pyridoxal phosphate (PLP) or 5'-pyridoxamine phosphate (PMP) or the acceptor substrate were determined to adopt a canonical fold-type I of PLP-dependent enzymes with a unique small additional domain. The structure guided site-directed mutagenesis identified key amino acid residues for substrate binding and catalytic activities, thus providing insights into the transamination mechanism of CrmG.


Asunto(s)
2,2'-Dipiridil/análogos & derivados , Transaminasas/metabolismo , 2,2'-Dipiridil/metabolismo , Cromatografía Líquida de Alta Presión , Conformación Proteica , Espectrofotometría Ultravioleta , Transaminasas/química
12.
J Fluoresc ; 26(2): 689-701, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26708008

RESUMEN

New three ruthenium (II) polypyridyl complexes [Ru(phen)2mpip](2+)(1) {mpip = 2-(4-morpholinophenyl)-1H-imidazo[4,5-f][1,10]phenanthroline}, (phen = 1,10-Phenanthrolene), [Ru(bpy)2mpip](2+)(2) (bpy = 2,2'bipyridyl), [Ru(dmb)2mpip](2+)(3) (dmb = 4, 4-dimethyl 2, 2'-bipyridine) have been synthesized and characterized by spectral studies IR, UV-vis, (1)H, (13)C-NMR, mass and elemental analysis. The binding properties of these three complexes towards calf-thymus DNA (CT-DNA) have been investigated by UV-Vis spectroscopy, different fluorescence methods and viscosity measurements, indicating that all the complexes bind to CT-DNA by means of intercalation, but with different binding affinities. Sensor effect of ions/solvents and BSA (Bovine Serum Albumin) binding studies of these complexes were also studied. Docking studies also reveals that complexes will bind in between base pairs (Intercalate) of DNA and gives information about the binding strength.


Asunto(s)
2,2'-Dipiridil/química , ADN/química , Sustancias Intercalantes/química , Morfolinas/química , Rutenio/química , Albúmina Sérica Bovina/metabolismo , 2,2'-Dipiridil/metabolismo , Animales , Sitios de Unión , Bovinos , ADN/metabolismo , Sustancias Intercalantes/metabolismo , Iones , Luminiscencia , Espectroscopía de Resonancia Magnética , Simulación del Acoplamiento Molecular , Estructura Molecular , Morfolinas/metabolismo , Unión Proteica , Rutenio/metabolismo , Albúmina Sérica Bovina/química , Solventes
13.
J Inorg Biochem ; 148: 57-61, 2015 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-25912316

RESUMEN

The small subunit from the NiFe uptake hydrogenase, HupSL, in the cyanobacterium Nostoc punctiforme ATCC 29133, has been isolated in the absence of the large subunit (P. Raleiras, P. Kellers, P. Lindblad, S. Styring, A. Magnuson, J. Biol. Chem. 288 (2013) 18,345-18,352). Here, we have used flash photolysis to reduce the iron-sulfur clusters in the isolated small subunit, HupS. We used ascorbate as electron donor to the photogenerated excited state of Ru(II)-trisbipyridine (Ru(bpy)3), to generate Ru(I)(bpy)3 as reducing agent. Our results show that the isolated small subunit can be reduced by the Ru(I)(bpy)3 generated through flash photolysis.


Asunto(s)
Proteínas Bacterianas/metabolismo , Hidrogenasas/metabolismo , Proteínas Hierro-Azufre/metabolismo , Nostoc/enzimología , 2,2'-Dipiridil/análogos & derivados , 2,2'-Dipiridil/química , 2,2'-Dipiridil/metabolismo , 2,2'-Dipiridil/farmacología , Ácido Ascórbico/química , Ácido Ascórbico/metabolismo , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Complejos de Coordinación , Espectroscopía de Resonancia por Spin del Electrón , Hidrogenasas/química , Hidrogenasas/genética , Proteínas Hierro-Azufre/química , Proteínas Hierro-Azufre/genética , Cinética , Modelos Químicos , Estructura Molecular , Nostoc/genética , Oxidación-Reducción/efectos de los fármacos , Oxidación-Reducción/efectos de la radiación , Fotólisis/efectos de los fármacos , Fotólisis/efectos de la radiación , Subunidades de Proteína/química , Subunidades de Proteína/genética , Subunidades de Proteína/metabolismo , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/metabolismo , Espectrofotometría , Especificidad por Sustrato
14.
J Phys Chem B ; 119(24): 7612-24, 2015 Jun 18.
Artículo en Inglés | MEDLINE | ID: mdl-25731703

RESUMEN

PpcA, a tri-heme cytochrome c7 from Geobacter sulfurreducens, was investigated as a model for photosensitizer-initiated electron transfer within a multi-heme "molecular wire" protein architecture. Escherichia coli expression of PpcA was found to be tolerant of cysteine site-directed mutagenesis, demonstrated by the successful expression of natively folded proteins bearing cysteine mutations at a series of sites selected to vary characteristically with respect to the three -CXXCH- heme binding domains. The introduced cysteines readily reacted with Ru(II)-(2,2'-bpy)2(4-bromomethyl-4'-methyl-2,2'-bipyridine) to form covalently linked constructs that support both photo-oxidative and photo-reductive quenching of the photosensitizer excited state, depending upon the initial heme redox state. Excited-state electron-transfer times were found to vary from 6 × 10(-12) to 4 × 10(-8) s, correlated with the distance and pathways for electron transfer. The fastest rate is more than 10(3)-fold faster than previously reported for photosensitizer-redox protein constructs using amino acid residue linking. Clear evidence for inter-heme electron transfer within the multi-heme protein is not detected within the lifetimes of the charge-separated states. These results demonstrate an opportunity to develop multi-heme c-cytochromes for investigation of electron transfer in protein "molecular wires" and to serve as frameworks for metalloprotein designs that support multiple-electron-transfer redox chemistry.


Asunto(s)
2,2'-Dipiridil/química , Grupo Citocromo c/química , Geobacter/enzimología , Rutenio/química , 2,2'-Dipiridil/metabolismo , Grupo Citocromo c/metabolismo , Transporte de Electrón , Modelos Moleculares , Procesos Fotoquímicos , Rutenio/metabolismo
15.
Chem Commun (Camb) ; 50(37): 4810-2, 2014 May 14.
Artículo en Inglés | MEDLINE | ID: mdl-24687158

RESUMEN

We report two synthetic approaches to prepare a highly crystalline Zr(IV)-based metal-organic framework (MOF) containing open 2,2'-bipyridine (bpy) chelating sites. The resulting UiO-67-bpydc readily forms complexes with PdCl2 to produce a MOF that exhibits efficient and recyclable catalytic activity for the Suzuki-Miyaura cross-coupling reaction.


Asunto(s)
2,2'-Dipiridil/química , Modelos Moleculares , Paladio/química , Circonio/química , 2,2'-Dipiridil/metabolismo , Catálisis , Paladio/metabolismo , Circonio/metabolismo
16.
Microbiology (Reading) ; 160(Pt 3): 467-478, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-24353310

RESUMEN

Two putative pathway-specific regulators have been identified in the collismycin A gene cluster: ClmR1, belonging to the TetR-family, and the LuxR-family transcriptional regulator ClmR2. Inactivation of clmR1 led to a moderate increase of collismycin A yields along with an early onset of its production, suggesting an inhibitory role for the product of this gene. Inactivation of clmR2 abolished collismycin A biosynthesis, whereas overexpression of ClmR2 led to a fourfold increase in production yields, indicating that ClmR2 is an activator of collismycin A biosynthesis. Expression analyses of the collismycin gene cluster in the wild-type strain and in ΔclmR1 and ΔclmR2 mutants confirmed the role proposed for both regulatory genes, revealing that ClmR2 positively controls the expression of most of the genes in the cluster and ClmR1 negatively regulates both its own expression and that of clmR2. Additionally, production assays and further transcription analyses confirmed the existence of a higher regulatory level modulating collismycin A biosynthesis in response to iron concentrations in the culture medium. Thus, high iron levels inhibit collismycin A biosynthesis through the repression of clmR2 transcription. These results have allowed us to propose a regulatory model that integrates the effect of iron as the main environmental stimulus controlling collismycin A biosynthesis.


Asunto(s)
2,2'-Dipiridil/análogos & derivados , Hierro/metabolismo , Redes y Vías Metabólicas , Streptomyces/metabolismo , Factores de Transcripción/genética , 2,2'-Dipiridil/metabolismo , Secuencia de Aminoácidos , Regulación Bacteriana de la Expresión Génica , Orden Génico , Datos de Secuencia Molecular , Familia de Multigenes , Alineación de Secuencia , Streptomyces/genética , Factores de Transcripción/química , Factores de Transcripción/metabolismo
17.
World J Microbiol Biotechnol ; 30(1): 331-4, 2014 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-23839716

RESUMEN

The study describes the use of the chelating agent 2,2'-dipyridyl in conjunction with lysine to increase the production of the siderophore desferrioxamine E by a previously described actinobacterium 23F. Desferrioxamine E is a type of siderophore known to be produced by Streptomycete species. Lysine is a precursor of the siderophore and its presence in the culture medium is known to promote desferrioxamine E synthesis. The further addition of 2,2'-dipyridyl was found to enhance production of the siderophore in the presence of lysine (5 g l(-1)) nearly twofold when incorporated at a concentration of 200 µM. Increasing the concentration of the chelating agent above 200 µM resulted in a decrease in siderophore production. The role of the chelating agent was thought to be in creating iron-limiting conditions in the culture medium and so promoting the induction of the desferrioxamine E biosynthetic pathway. This medium is likely to be a useful tool in the screening for producers of desferrioxamine E.


Asunto(s)
2,2'-Dipiridil/metabolismo , Actinobacteria/metabolismo , Medios de Cultivo/química , Ácidos Hidroxámicos/metabolismo , Lactamas/metabolismo , Lisina/metabolismo , Actinobacteria/crecimiento & desarrollo , Quelantes/metabolismo , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Activación Transcripcional
18.
FEMS Microbiol Lett ; 350(2): 209-15, 2014 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-24188714

RESUMEN

In the current study, the small RNA ryhB, which regulates the metabolism of iron in Escherichia coli, was constitutively expressed in engineered E. coli DALA. The resulting strain E. coli DALRA produced 16% more 5-aminolevulinic acid (ALA) than the parent strain E. coli DALA in batch fermentation. Meanwhile, we found that addition of iron in the medium increased heme formation and reduced ALA yield, whereas the presence of iron chelator in the medium decreased heme concentration and increased the ALA production efficiency (ALA yield per OD600). The qRT-PCR analysis showed that the mRNA levels of hemB and hemH were also decreased as well as the known RyhB target genes of acnAB, sdhAB, fumA, and cydAB in E. coli DALRA. These results indicated that small RNA can be used as a tool for regulating ALA accumulation in E. coli.


Asunto(s)
Ácido Aminolevulínico/metabolismo , Escherichia coli/genética , Hemo/metabolismo , Subunidades Ribosómicas Pequeñas Bacterianas/metabolismo , Transcripción Genética/genética , 2,2'-Dipiridil/metabolismo , Ácido Aminolevulínico/análisis , Escherichia coli/metabolismo , Hierro/metabolismo , Subunidades Ribosómicas Pequeñas Bacterianas/química , Subunidades Ribosómicas Pequeñas Bacterianas/genética
19.
Inorg Chem ; 52(22): 13029-41, 2013 Nov 18.
Artículo en Inglés | MEDLINE | ID: mdl-24191646

RESUMEN

A series of phosphorescent cyclometalated iridium(III) polypyridine complexes appended with a ß-D-glucose moiety [Ir(N^C)2(bpy-TEG-ONCH3-ß-D-glc)](PF6) [bpy-TEG-ONCH3-ß-D-glc = 4-(10-N-methyl-N-(ß-D-glucopyranosyl)-amino-oxy-2,5,8-trioxa-dec-1-yl)-4'-methyl-2,2'-bipyridine; HN^C = 2-((1,1'-biphenyl)-4-yl)benzothiazole) (Hbt) (1a), 2-phenylpyridine (Hppy) (2a), 2-phenylquinoline (Hpq) (3a), 7,8-benzoquinoline (Hbzq) (4a)] has been synthesized and characterized. The D-galactose counterparts [Ir(N^C)2(bpy-TEG-ONCH3-ß-D-gal)](PF6) [bpy-TEG-ONCH3-ß-D-gal = 4-(10-N-methyl-N-(ß-D-galactopyranosyl)-amino-oxy-2,5,8-trioxa-dec-1-yl)-4'-methyl-2,2'-bipyridine; HN^C = Hbt (1b), Hppy (2b), Hpq (3b), Hbzq (4b)] and a sugar-free bt complex [Ir(bt)2(bpy-TEG-OMe)](PF6) [bpy-TEG-OMe = 4-(2,5,8,11-tetraoxa-dodec-1-yl)-4'-methyl-2,2'-bipyridine] (1c) have also been prepared. Upon photoexcitation, all the complexes displayed intense and long-lived triplet metal-to-ligand charge-transfer ((3)MLCT) [dπ(Ir) → π*(N^N)] or triplet intraligand ((3)IL) (π → π*) (N^C and N^N) emission. The lipophilicity, the cellular uptake efficiency, and cytotoxicity of the complexes toward human cervix epithelioid carcinoma cells (HeLa) have been examined. Temperature dependence and chemical inhibition experiments indicated that the transport of bt-glucose complex 1a across the cell membrane occurred through an energy-requiring process such as endocytosis, in additional to a pathway that was mediated by glucose transporters (GLUTs). Importantly, the cellular uptake efficiency of this complex was found to be strongly dependent on hormonal stimulation and inhibition, rendering it a new phosphorescent metabolic indicator. Additionally, laser-scanning confocal microscopy revealed that the complex was localized in the mitochondria and highly resistant to photobleaching compared to a fluorescent organic glucose derivative 2-(N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino)-2-deoxy-d-glucose (2-NBDG).


Asunto(s)
2,2'-Dipiridil/química , Complejos de Coordinación/química , Galactosa/química , Glucosa/química , Iridio/química , Sustancias Luminiscentes/química , 2,2'-Dipiridil/análisis , 2,2'-Dipiridil/metabolismo , Transporte Biológico , Complejos de Coordinación/análisis , Complejos de Coordinación/metabolismo , Endocitosis , Galactosa/análisis , Galactosa/metabolismo , Glucosa/análisis , Glucosa/metabolismo , Células HeLa , Humanos , Iridio/análisis , Iridio/metabolismo , Sustancias Luminiscentes/análisis , Sustancias Luminiscentes/metabolismo
20.
Chem Biol ; 20(8): 1022-32, 2013 Aug 22.
Artículo en Inglés | MEDLINE | ID: mdl-23911584

RESUMEN

Collismycin A is a member of the 2,2'-bipyridyl family of natural products that shows cytotoxic activity. Structurally, it belongs to the hybrid polyketides-nonribosomal peptides. After the isolation and characterization of the collismycin A gene cluster, we have used the combination of two different approaches (insertional inactivation and biocatalysis) to increase structural diversity in this natural product class. Twelve collismycin analogs were generated with modifications in the second pyridine ring of collismycin A, thus potentially maintaining biologic activity. None of these analogs showed better cytotoxic activity than the parental collismycin. However, some analogs showed neuroprotective activity and one of them (collismycin H) showed better values for neuroprotection against oxidative stress in a zebrafish model than those of collismycin A. Interestingly, this analog also showed very poor cytotoxic activity, a feature very desirable for a neuroprotectant compound.


Asunto(s)
2,2'-Dipiridil/análogos & derivados , Fármacos Neuroprotectores/metabolismo , Streptomyces/genética , Streptomyces/metabolismo , 2,2'-Dipiridil/química , 2,2'-Dipiridil/metabolismo , 2,2'-Dipiridil/farmacología , Animales , Antineoplásicos/química , Antineoplásicos/metabolismo , Antineoplásicos/farmacología , Vías Biosintéticas , Línea Celular Tumoral , Proliferación Celular/efectos de los fármacos , Genes Bacterianos , Ingeniería Genética , Humanos , Familia de Multigenes , Fármacos Neuroprotectores/química , Fármacos Neuroprotectores/farmacología , Pez Cebra
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