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1.
Acta Crystallogr F Struct Biol Commun ; 78(Pt 4): 150-160, 2022 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-35400667

RESUMEN

Actophorin, which was recently tested for crystallization under microgravity on the International Space Station, was subjected to mutagenesis to identify a construct with improved biophysical properties that were expected to improve the extent of diffraction. First, 20 mutations, including one C-terminal deletion of three residues, were introduced individually into actophorin, resulting in modest increases in thermal stability of between +0.5°C and +2.2°C. All but two of the stabilizing mutants increased both the rates of severing F-actin filaments and of spontaneous polymerization of pyrenyl G-actin in vitro. When the individual mutations were combined into a single actophorin variant, Acto-2, the overall thermal stability was 22°C higher than that of wild-type actophorin. When an inactivating S2P mutation in Acto-2 was restored, Acto-2/P2S was more stable by 20°C but was notably more active than the wild-type protein. The inactivating S2P mutation reaffirms the importance that Ser2 plays in the F-actin-severing reaction. The crystal structure of Acto-2 was solved to 1.7 Šresolution in a monoclinic space group, a first for actophorin. Surprisingly, despite the increase in thermal stability, the extended ß-turn region, which is intimately involved in interactions with F-actin, is disordered in one copy of Acto-2 in the asymmetric unit. These observations emphasize the complex interplay among protein thermal stability, function and dynamics.


Asunto(s)
Acanthamoeba , Ingravidez , Acanthamoeba/química , Acanthamoeba/metabolismo , Actinas/metabolismo , Cristalización , Cristalografía por Rayos X
2.
Acta Crystallogr F Struct Biol Commun ; 77(Pt 12): 452-458, 2021 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-34866600

RESUMEN

Actophorin, a protein that severs actin filaments isolated from the amoeba Acanthamoeba castellanii, was employed as a test case for crystallization under microgravity. Crystals of purified actophorin were grown under microgravity conditions aboard the International Space Station (ISS) utilizing an interactive crystallization setup between the ISS crew and ground-based experimenters. Crystals grew in conditions similar to those grown on earth. The structure was solved by molecular replacement at a resolution of 1.65 Å. Surprisingly, the structure reveals conformational changes in a remote ß-turn region that were previously associated with actophorin phosphorylated at the terminal residue Ser1. Although crystallization under microgravity did not yield a higher resolution than crystals grown under typical laboratory conditions, the conformation of actophorin obtained from solving the structure suggests greater flexibility in the actophorin ß-turn than previously appreciated and may be beneficial for the binding of actophorin to actin filaments.


Asunto(s)
Acanthamoeba , Ingravidez , Acanthamoeba/química , Acanthamoeba/metabolismo , Actinas/metabolismo , Cristalización , Cristalografía por Rayos X
3.
Curr Eye Res ; 46(12): 1792-1799, 2021 12.
Artículo en Inglés | MEDLINE | ID: mdl-34029500

RESUMEN

PURPOSE: To evaluate whether allergic conjunctivitis (AC) could be induced by Acanthamoeba excretory-secretory protein (ESP) and analyze the therapeutic effect of resolvin (Rv) D1 and antiallergic agents. METHODS: Human conjunctival epithelial cells (HCVCs) were treated with 10 µg/well of ESP, and Th2 cytokines were measured using real-time PCR. C57BL/6 mice were treated with 10 µg/5 µL of ESP after sensitization, and conjunctivas isolated from the mice were stained with hematoxylin and eosin (H&E) for the analysis of eosinophils and periodic acid-Schiff (PAS) for the analysis of goblet cells. Cytokine levels in the eye-draining lymph nodes (dLNs) and spleens were measured using the enzyme-linked immunosorbent assay (ELISA). Then, the treatment effects of RvD1 and the antiallergic agents (olopatadine, bepotastine, and alcaftadine) on the HCVCs, mouse conjunctivas, dLNs, and spleens were assessed. RESULTS: Th2 cytokines were increased in the ESP-treated conjunctival cells. Mouse conjunctivas treated with ESP showed significant infiltration of eosinophils and goblet cells, and the dLN and spleen exhibited increased IL-4, IL-5 and IL-13 levels. All findings were significantly decreased upon treatment with RvD1 and the antiallergic agents. CONCLUSIONS: Acanthamoeba could be used to establish an animal model of AC, which could be effectively treated with RvD1 or topical antiallergic agents.


Asunto(s)
Acanthamoeba/química , Conjuntiva/patología , Conjuntivitis Alérgica/etiología , Ácidos Docosahexaenoicos/uso terapéutico , Proteínas Protozoarias/toxicidad , Animales , Línea Celular , Conjuntiva/parasitología , Conjuntivitis Alérgica/diagnóstico , Conjuntivitis Alérgica/tratamiento farmacológico , Modelos Animales de Enfermedad , Femenino , Humanos , Ratones , Ratones Endogámicos C57BL
4.
Parasitol Res ; 117(10): 3333-3336, 2018 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-30094540

RESUMEN

Free-living amoebae (FLA) are protozoa ubiquitously found in nature. As some species or strains of these FLA are pathogenic for humans and animals, they represent objects of medical and parasitological research worldwide. Storage of valuable FLA strains in laboratories is often time- and energy-consuming and expensive. The shipment of such strains as frozen stocks is cumbersome and challenging in terms of cooling requirements as well as of transport regulations. To overcome these difficulties and challenges in maintenance and transport, we present a new method to generate lyophilised samples of non-cyst-forming FLA (Ripella (Vannella) spp.) and cyst-forming FLA (Acanthamoeba spp.) strains which guarantees a simple mechanism for long-term storage at ambient temperature, as well as easy handling and/or shipment. The survival rate of all FLA lyophilisates after short-term storage (2 months) was comparable to the survival rate of freeze cultures of the respective strains. Furthermore, the viability of Acanthamoeba spp. cysts after storage for 29 months was 20 to 40% following lyophilisation and rehydration, with strain variation.


Asunto(s)
Acanthamoeba/fisiología , Amebozoos/fisiología , Preservación Biológica/métodos , Acanthamoeba/química , Amebozoos/química , Animales , Temperatura
5.
Exp Parasitol ; 192: 19-24, 2018 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-30031120

RESUMEN

Amoebae from the genus Acanthamoeba are facultative pathogens of humans and other animals. In humans they most frequently infect the eye causing a sight threatening infection known as Acanthamoeba keratitis (AK), and also cause an often fatal encephalitis (GAE). A mannose-binding protein (MBP) has been identified as being important for Acanthamoeba infection especially in AK. This lectin has previously been characterized from Acanthamoeba castellanii as consisting of multiple 130 kDa subunits. MBP expression correlates with pathogenic potential and is expressed in a number of Acanthamoeba species. Here we report the purification of a similar lectin from Acanthamoeba culbertsoni and the production of a monoclonal antibody to it. The A. culbertsoni MBP was isolated by affinity chromatography using α-D-mannose agarose and has an apparent molecular weight of 83 kDa. The monoclonal antibody is an IgM that is useful in both western blots and immunofluorescence. We expect that this antibody will be useful in the study of the pathology of A. culbertsoni and in its identification in clinical samples.


Asunto(s)
Acanthamoeba/inmunología , Anticuerpos Monoclonales/biosíntesis , Anticuerpos Antiprotozoarios/biosíntesis , Lectina de Unión a Manosa/inmunología , Proteínas Protozoarias/inmunología , Acanthamoeba/química , Queratitis por Acanthamoeba/parasitología , Animales , Antígenos de Protozoos/inmunología , Western Blotting , Electroforesis en Gel de Poliacrilamida , Ensayo de Inmunoadsorción Enzimática , Hibridomas , Sueros Inmunes/sangre , Isotipos de Inmunoglobulinas , Inmunohistoquímica , Ratones , Ratones Endogámicos BALB C
6.
Curr Microbiol ; 74(11): 1316-1323, 2017 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-28755026

RESUMEN

Acanthamoeba is a free-living amoeba that causes severe corneal infection (Acanthamoeba keratitis) and produces a variety of extracellular enzymes, called exoproteome. Since physicochemical characters are suggested being associated with therapeutic profile and clinical severity of the infection, we investigated the physicochemical properties of proteolysis mediated by amoebic exoproteome. Corneal scraping was collected from a patient who showed typical symptoms of acute Acanthamoeba keratitis. Axenic amoeba was phylogenetically identified by 18S rDNA sequencing analysis. Effects of pH, temperature and diamidines on proteolysis mediated by exoproteome were assessed using zymography assays. Proteolytic enzymes were most active at pH 7.0 and 37 °C. Calcium ions decreased enzymatic activity. The main components of amoebic exoproteome were characterized as serine proteases. We demonstrated for the first time that commercial antimicrobial diamidines used for Acanthamoeba keratitis therapy inhibit enzymatic activity of amoebic exoproteome. Results showed the thermostability of Acanthamoeba proteases, which suggest a long-term effect of these virulence factors at the central and peripheral cornea with possible role in degradation of extracellular matrix components. Our findings open new perspectives about the complementary and unreported properties of antimicrobial compounds of the diamidine class on the inhibition of enzymatic activity and presumptive control of amoebic infection in the cornea.


Asunto(s)
Acanthamoeba/química , Acanthamoeba/metabolismo , Córnea/parasitología , Toxinas Biológicas/metabolismo , Queratitis por Acanthamoeba/parasitología , Adulto , Endopeptidasas/metabolismo , Activación Enzimática , Estabilidad de Enzimas , Femenino , Humanos , Concentración de Iones de Hidrógeno , Proteolisis , Temperatura
7.
Exp Parasitol ; 145 Suppl: S50-6, 2014 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-24858925

RESUMEN

Acanthamoeba is a free-living protozoan found in a wide variety of habitats. A classification of Acanthamoeba into currently eighteen genotypes (T1-T18) has been established, however, data on differences between genotypes on the protein level are scarce. The aim of this study was to compare protein and immunoreactivity profiles of Acanthamoeba genotypes. Thirteen strains, both clinical and non-clinical, from genotypes T4, T5, T6, T7, T9, T11 and T12, representing three morphological groups, were investigated for their protein profiles and IgG, IgM and IgA immunoreactivities. It was shown that protein and immunoreactivity profiles of Acanthamoeba genotypes T4, T5, T6, T7, T9, T11 and T12 are clearly distinct from each other, but the banding patterns correlate to the morphological groups. Normal human sera revealed anti-Acanthamoeba antibodies against isolates of all investigated genotypes, interestingly, however only very weak IgM and virtually no IgA immunoreactivity with T7 and T9, both representing morphological group I. The strongest IgG, IgM and IgA immunoreactivities were observed for genotypes T4, T5 and T6. Differences of both, protein and immunological patterns, between cytopathic and non-cytopathic strains, particularly within genotype T4, were not at the level of banding patterns, but rather in expression levels.


Asunto(s)
Acanthamoeba/química , Anticuerpos Antiprotozoarios/análisis , Antígenos de Protozoos/análisis , Inmunoglobulinas/análisis , Proteínas Protozoarias/análisis , Acanthamoeba/clasificación , Acanthamoeba/genética , Acanthamoeba/inmunología , Animales , Anticuerpos Antiprotozoarios/biosíntesis , Antígenos de Protozoos/inmunología , Antígenos de Protozoos/aislamiento & purificación , Electroforesis en Gel de Poliacrilamida , Genotipo , Humanos , Inmunoglobulinas/biosíntesis , Ratones , Proteínas Protozoarias/inmunología , Proteínas Protozoarias/aislamiento & purificación
8.
Lipids ; 49(4): 369-83, 2014 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-24535098

RESUMEN

Ether lipids were identified among components liberated with HF and nitrous acid deamination from Acanthamoeba rhysodes whole cells and its membrane glycoinositolphospholipids (GIPL). Liberated ether glycerols were converted to various derivatives that served characterization thereof. These included TMS and isopropylidene derivatives, oxidation with sodium periodate to aldehyde followed by reduction with NaBH4 to alcohol, and reaction of the alcohol with acetic anhydrite to form acetate derivatives. Periodate sensitivity demonstrated that the alkyl side chains were linked to the sn-1 position of glycerol. Combined information from TLC, GC-MS analysis, MALDI-TOF spectrometry, and chemical degradation experiments indicated the presence of ether-linked saturated normal and branched hydrocarbons with a length of C20-23 in the phospholipid fraction, C20-24 in free GPI, and C21-23 in the LPG polymer. The distribution of particular classes of alkylglycerols was similar for phospholipid and GPI fractions, and amounted to 2.62% (±0.04-0.28) 1-O-eicosanyl-sn-glycerol, 16.66% (±0.32-1.1) 1-O-uncosanyl-sn-glycerol, 9.18% (±0.33-1.37) anteiso-1-O-docosanyl-sn-glycerol, 47.56% (±0.32-2.14) 1-O-docosanyl-sn-glycerol, 20.56% (±0.58-1.67) anteiso-1-O-tricosanyl-sn-glycerol, and 2.34% (±0.12-0.63) 1-O-tricosanyl-sn-glycerol. For LPG preparation, the most abundant were anteiso-1-O-tricosanyl-sn-glycerol (57.26%) and 1-O-docosanyl-sn-glycerol (30.12%). The data from TLC and GC-MS analysis showed that ether lipids from phospholipids probably represent the lyso-alkylglycerol type, while those derived from GIPL are alkylacylglycerol moieties.


Asunto(s)
Acanthamoeba/química , Éteres/química , Glucolípidos/química , Fosfolípidos/química , Éteres/aislamiento & purificación , Cromatografía de Gases y Espectrometría de Masas , Glicerol/química , Lípidos de la Membrana/química
9.
Parasit Vectors ; 7: 56, 2014 Jan 30.
Artículo en Inglés | MEDLINE | ID: mdl-24479709

RESUMEN

BACKGROUND: In the microbial ecosystem, microbes compete for space and nutrients. Consequently, some have developed the ability to kill or inhibit the growth of other competing microbes by producing antimicrobial substances. As the 'producer' species are generally immune to these substances, their compounds act on the competing microbial species and give the producer more space and access to nutrients for growth. Many currently used antibiotics were developed by exploiting this potential of certain microbes. FINDINGS: Here, the free-living amoeba, Acanthamoeba castellanii, was investigated for its antibacterial activity against representative Gram positive and Gram negative bacteria, while bacterial isolates were tested for their anti-amoebic properties. Conditioned medium from A. castellanii showed remarkable bactericidal properties against methicillin-resistant Staphylococcus aureus (MRSA) exhibiting almost 100% kill rate, but had limited effect against Acinetobacter sp., Pseudomonas aeruginosa and vancomycin-resistant Enterococcus faecalis (VRE). Similarly, the conditioned medium of E. coli K1 and Enterobacter sp., exhibited potent anti-Acanthamoebic effects in a concentration-dependent manner. Conditioned media of Acanthamoeba, E. coli K1 and Enterobacter sp. showed no cytotoxicity in vitro when tested against human brain microvascular endothelial cells. Active molecule/s in aforementioned amoebic and two bacterial conditioned media were 5 - 10 kDa, and <5 kDa respectively. CONCLUSIONS: A. castellanii conditioned medium showed potent bactericidal properties against MRSA. The active molecule(s) are heat- and pronase-resistant, and in the 5 to 10 kDa molecular mass range. Contrary to this, E. coli K1 and Enterobacter sp., conditioned medium showed anti-amoebic effects that are <5 kDa in molecular mass, suggestive of active metabolites.


Asunto(s)
Acanthamoeba/química , Amebicidas/farmacología , Antiinfecciosos/farmacología , Bacterias/química , Staphylococcus aureus Resistente a Meticilina/efectos de los fármacos , Amebicidas/aislamiento & purificación , Amebicidas/metabolismo , Antiinfecciosos/aislamiento & purificación , Antiinfecciosos/metabolismo , Medios de Cultivo Condicionados , Bacterias Gramnegativas/efectos de los fármacos , Bacterias Grampositivas/efectos de los fármacos , Humanos , Pruebas de Sensibilidad Microbiana , Viabilidad Microbiana
10.
Infect Disord Drug Targets ; 13(2): 133-40, 2013 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-23808873

RESUMEN

This paper presents unequivocal results about the presence of trypanothione and its precursor glutathionespermidine from the opportunistic human pathogen Acanthamoeba polyphaga. They were isolated by RP-HPLC as thiolbimane derivatives and characterized using matrix-assisted laser desorption ionization-time-of-flight (MALDI-TOF/TOF). Additionally RP-HPLC demonstrated that thiol-bimane compounds corresponding to cysteine and glutathione were also present in A. polyphaga. Besides trypanothione, we want to report four new peptides in trophozoites, a tetrapeptide, a hexapeptide, a heptapeptide and a nonapeptide. Trypanothione and two of the thiol peptides, the hexapeptide and heptapeptide, are oxidized since the reduced forms increase in amount when the normal extract is treated by DTT or by electrolytic reduction that convert the oxidized forms to reduced ones. On the other hand, they disappear when the amoeba extract is treated with NEM or when the amoeba culture is treated with various inhibitors of NADPH-dependent disulfidereducing enzymes. Comparison of the thiol peptides, including trypanothione from A. polyphaga with extracts from human lymphocytes showed that they are not present in the latter. Therefore, some of the peptides here reported could be used as antigens for rapid detection of these parasites. In regard to the presence of the enzymes that synthesize and reduce trypanothione in A. polyphaga we suggest that they can be used as drug targets.


Asunto(s)
Acanthamoeba/química , Acanthamoeba/metabolismo , Glutatión/análogos & derivados , Péptidos/química , Proteínas Protozoarias/química , Espermidina/análogos & derivados , Cromatografía Líquida de Alta Presión/métodos , Glutatión/química , Glutatión/aislamiento & purificación , Glutatión/metabolismo , Humanos , Péptidos/aislamiento & purificación , Péptidos/metabolismo , Proteínas Protozoarias/aislamiento & purificación , Proteínas Protozoarias/metabolismo , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos , Espermidina/química , Espermidina/aislamiento & purificación , Espermidina/metabolismo
11.
Microb Ecol ; 66(3): 715-26, 2013 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-23764733

RESUMEN

Hartmannella vermiformis and Acanthamoeba polyphaga are frequently isolated from drinking water and permissive to Legionella pneumophila parasitization. In this study, extracellular factor(s) produced by H. vermiformis and A. polyphaga were assessed for their effects on cultivability of L. pneumophila. Page's amoeba saline (PAS) was used as an encystment medium for H. vermiformis and A. polyphaga monolayers, and the culture supernatants (HvS and ApS, respectively) were assessed against L. pneumophila growth. Compared to PAS and ApS, HvS significantly inhibited L. pneumophila strain Philadelphia-1 (Ph-1) cultivability by 3 log(10) colony forming unit (CFU) mL(-1) after 3 days of exposure compared to <0.5 log(10) CFU mL(-1) reduction of strain Lp02 (P < 0.001). Flow cytometric analysis revealed changes in the percentage and cultivability of three bacterial subpopulations: intact/slightly damaged membrane (ISM), undefined membrane status (UD), and mixed type (MT). After 3 days of HvS exposure, the MT subpopulation decreased significantly (31.6 vs 67.2 %, respectively, P < 0.001), while the ISM and UD subpopulations increased (+26.7 and +6.9 %, respectively) with the ISM subpopulation appearing as viable but nonculturable (VBNC) cells. HvS was separated into two fractions based on molecular weight, with more than 99 % of the L. pneumophila inhibition arising from the <5 kDa fraction (P < 0.001). Liquid chromatography indicated the inhibitory molecule(s) are likely polar and elute from a Novapak C18 column between 6 and 15 min. These results demonstrate that H. vermiformis is capable of extracellular modulation of L. pneumophila cultivability and probably promote the VBNC state for this bacterium.


Asunto(s)
Antibacterianos/farmacología , Regulación hacia Abajo/efectos de los fármacos , Hartmannella/química , Legionella pneumophila/crecimiento & desarrollo , Acanthamoeba/química , Acanthamoeba/metabolismo , Acanthamoeba/microbiología , Antibacterianos/química , Antibacterianos/aislamiento & purificación , Antibacterianos/metabolismo , Hartmannella/metabolismo , Hartmannella/microbiología , Legionella pneumophila/efectos de los fármacos , Peso Molecular
12.
Nat Chem Biol ; 9(1): 37-42, 2013 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-23143413

RESUMEN

Human pathogens often produce soluble protein toxins that generate pores inside membranes, resulting in the death of target cells and tissue damage. In pathogenic amoebae, this has been exemplified with amoebapores of the enteric protozoan parasite Entamoeba histolytica. Here we characterize acanthaporin, to our knowledge the first pore-forming toxin to be described from acanthamoebae, which are free-living, bacteria-feeding, unicellular organisms that are opportunistic pathogens of increasing importance and cause severe and often fatal diseases. We isolated acanthaporin from extracts of virulent Acanthamoeba culbertsoni by tracking its pore-forming activity, molecularly cloned the gene of its precursor and recombinantly expressed the mature protein in bacteria. Acanthaporin was cytotoxic for human neuronal cells and exerted antimicrobial activity against a variety of bacterial strains by permeabilizing their membranes. The tertiary structures of acanthaporin's active monomeric form and inactive dimeric form, both solved by NMR spectroscopy, revealed a currently unknown protein fold and a pH-dependent trigger mechanism of activation.


Asunto(s)
Acanthamoeba/química , Proteínas Protozoarias/química , Proteínas Protozoarias/fisiología , Acanthamoeba/patogenicidad , Secuencia de Aminoácidos , Dimerización , Modelos Moleculares , Datos de Secuencia Molecular , Estructura Terciaria de Proteína , Relación Estructura-Actividad , Virulencia
13.
J Biol Chem ; 287(52): 43191-204, 2012 Dec 21.
Artículo en Inglés | MEDLINE | ID: mdl-23139421

RESUMEN

Glycans play key roles in host-pathogen interactions; thus, knowing the N-glycomic repertoire of a pathogen can be helpful in deciphering its methods of establishing and sustaining a disease. Therefore, we sought to elucidate the glycomic potential of the facultative amoebal parasite Acanthamoeba. This is the first study of its asparagine-linked glycans, for which we applied biochemical tools and various approaches of mass spectrometry. An initial glycomic screen of eight strains from five genotypes of this human pathogen suggested, in addition to the common eukaryotic oligomannose structures, the presence of pentose and deoxyhexose residues on their N-glycans. A more detailed analysis was performed on the N-glycans of a genotype T11 strain (4RE); fractionation by HPLC and tandem mass spectrometric analyses indicated the presence of a novel mannosylfucosyl modification of the reducing terminal core as well as phosphorylation of mannose residues, methylation of hexose and various forms of pentosylation. The largest N-glycan in the 4RE strain contained two N-acetylhexosamine, thirteen hexose, one fucose, one methyl, and two pentose residues; however, in this and most other strains analyzed, glycans with compositions of Hex(8-9)HexNAc(2)Pnt(0-1) tended to dominate in terms of abundance. Although no correlation between pathogenicity and N-glycan structure can be proposed, highly unusual structures in this facultative parasite can be found which are potential virulence factors or therapeutic targets.


Asunto(s)
Acanthamoeba/química , Glicómica , Acanthamoeba/metabolismo , Animales , Conformación de Carbohidratos , Humanos , Espectrometría de Masas/métodos , Polisacáridos/química , Polisacáridos/metabolismo
14.
J Biol Chem ; 285(8): 5738-47, 2010 Feb 19.
Artículo en Inglés | MEDLINE | ID: mdl-20018884

RESUMEN

Programs exist for searching protein sequences for potential membrane-penetrating segments (hydrophobic regions) and for lipid-binding sites with highly defined tertiary structures, such as PH, FERM, C2, ENTH, and other domains. However, a rapidly growing number of membrane-associated proteins (including cytoskeletal proteins, kinases, GTP-binding proteins, and their effectors) bind lipids through less structured regions. Here, we describe the development and testing of a simple computer search program that identifies unstructured potential membrane-binding sites. Initially, we found that both basic and hydrophobic amino acids, irrespective of sequence, contribute to the binding to acidic phospholipid vesicles of synthetic peptides that correspond to the putative membrane-binding domains of Acanthamoeba class I myosins. Based on these results, we modified a hydrophobicity scale giving Arg- and Lys-positive, rather than negative, values. Using this basic and hydrophobic scale with a standard search algorithm, we successfully identified previously determined unstructured membrane-binding sites in all 16 proteins tested. Importantly, basic and hydrophobic searches identified previously unknown potential membrane-binding sites in class I myosins, PAKs and CARMIL (capping protein, Arp2/3, myosin I linker; a membrane-associated cytoskeletal scaffold protein), and synthetic peptides and protein domains containing these newly identified sites bound to acidic phospholipids in vitro.


Asunto(s)
Acanthamoeba/química , Algoritmos , Proteínas Portadoras/química , Membrana Celular/química , Miosinas/metabolismo , Proteínas Protozoarias/química , Análisis de Secuencia de Proteína , Acanthamoeba/genética , Acanthamoeba/metabolismo , Animales , Sitios de Unión , Proteínas Portadoras/genética , Proteínas Portadoras/metabolismo , Membrana Celular/genética , Membrana Celular/metabolismo , Interacciones Hidrofóbicas e Hidrofílicas , Ratones , Miosinas/química , Miosinas/genética , Péptidos/química , Péptidos/genética , Péptidos/metabolismo , Estructura Terciaria de Proteína , Proteínas Protozoarias/genética , Proteínas Protozoarias/metabolismo
15.
Appl Environ Microbiol ; 75(21): 6827-30, 2009 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-19734326

RESUMEN

Some protozoans are able to encyst as a protective response to a harmful environment. The cyst wall usually contains chitin as its main structural constituent. Acanthamoeba is an exception since its cyst wall contains cellulose. Specific cytochemical differentiation between cellulose and chitin by microscopy has not been possible due to the similarity of the constituent beta-1,4-linked hexose backbones of these molecules. Thus, various fluorescent brightening agents and lectins bind to both cellulose and chitin. The identification of Acanthamoeba spp., which is based primarily on morphological and biochemical features, is labor-intensive and requires cloning and axenization. We describe a novel immunocytochemical method for identification of Acanthamoeba spp. based on selective binding of Trichoderma reesei cellulase to protozoan cyst wall cellulose. A recombinant cellulose-binding protein consisting of two cellulose-binding domains (CBDs) from T. reesei cellulases was coupled to the fluorescent dyes Alexa Fluor 350 and Alexa Fluor 568 or was labeled with biotin using EZ-Link sulfo-NHS-biotin. No staining reaction was observed with chitin-containing preparations of fungi. Thus, the recombinant CBDs can be used as a marker to distinguish between cellulose and chitin. This allows rapid identification of Acanthamoeba cyst wall cellulose in paraffin or frozen sections of infected tissues.


Asunto(s)
Acanthamoeba/química , Celulasa/metabolismo , Celulosa/análisis , Parasitología/métodos , Esporas Protozoarias/química , Coloración y Etiquetado/métodos , Trichoderma/enzimología , Acanthamoeba/aislamiento & purificación , Animales , Histocitoquímica/métodos , Esporas Protozoarias/aislamiento & purificación
16.
Protein Expr Purif ; 67(2): 113-9, 2009 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-19427903

RESUMEN

Capping protein (CP) is a ubiquitously expressed, heterodimeric actin binding protein that is essential for normal actin dynamics in cells. The existing methods for purifying native CP from tissues and recombinant CP from bacteria are time-consuming processes that involve numerous conventional chromatographic steps and functional assays to achieve a homogeneous preparation of the protein. Here, we report the rapid purification of Acanthamoeba CP from amoeba extracts and recombinant mouse CP from E. coli extracts using as an affinity matrix GST-fusion proteins containing the CP binding site from Acanthamoeba CARMIL and mouse CARMIL-1, respectively. This improved method for CP purification should facilitate the in vitro analysis of CP structure, function, and regulation.


Asunto(s)
Proteínas de Capping de la Actina/aislamiento & purificación , Proteínas Portadoras/química , Proteínas Protozoarias/aislamiento & purificación , Acanthamoeba/química , Proteínas de Capping de la Actina/genética , Proteínas de Capping de la Actina/metabolismo , Animales , Sitios de Unión , Proteínas Portadoras/genética , Proteínas Portadoras/metabolismo , Extractos Celulares/química , Electroforesis en Gel de Poliacrilamida , Escherichia coli/genética , Escherichia coli/metabolismo , Immunoblotting , Ratones , Proteínas de Microfilamentos , Estructura Terciaria de Proteína , Proteínas Protozoarias/genética , Proteínas Protozoarias/metabolismo , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/aislamiento & purificación , Proteínas Recombinantes de Fusión/metabolismo , Sefarosa/química
17.
Eukaryot Cell ; 7(9): 1513-7, 2008 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-18676958

RESUMEN

Members of the genus Acanthamoeba, amphizoic protozoan parasites, are causative agents of granulomatous amoebic encephalitis and amoebic keratitis. Proteinases play a role in various biologic actions in Acanthamoeba, including host tissue destruction, pathogenesis, and digestion of phagocytosed food. Interestingly, we found that encystation of Acanthamoeba was inhibited by the serine proteinase inhibitor phenylmethanesulfonyl fluoride. In this study, we characterize a serine proteinase that is involved in mediating the encystation of Acanthamoeba. This encystation-mediating serine proteinase (EMSP) is shown to be highly expressed during encystation by real-time PCR and Western blot analysis. Chemically synthesized small interfering RNA against EMSP inhibited the expression of EMSP mRNA and significantly reduced the encystation efficiency of Acanthamoeba. An EMSP-enhanced green fluorescent protein fusion protein localized to vesicle-like structures within the amoeba. Using LysoTracker analysis, these vesicular structures were confirmed to be lysosomes. After incubation of the transfected amoeba in encystment media, small fluorescent vesicle-like structures gathered and formed ball-like structures, which were identified as colocalizing with the autophagosome. Taken together, these results indicate that EMSP plays an important role in the differentiation of Acanthamoeba by promoting autolysis.


Asunto(s)
Acanthamoeba/enzimología , Acanthamoeba/fisiología , Amebiasis/parasitología , Proteínas Protozoarias/metabolismo , Serina Endopeptidasas/metabolismo , Acanthamoeba/química , Acanthamoeba/genética , Animales , Expresión Génica , Humanos , Transporte de Proteínas , Proteínas Protozoarias/análisis , Proteínas Protozoarias/genética , Serina Endopeptidasas/análisis , Serina Endopeptidasas/genética
18.
Proc Natl Acad Sci U S A ; 104(3): 784-9, 2007 Jan 16.
Artículo en Inglés | MEDLINE | ID: mdl-17215368

RESUMEN

The 466-aa tail of the heavy chain of Acanthamoeba myosin IC (AMIC) comprises an N-terminal 220-residue basic region (BR) followed by a 56-residue Gly/Pro/Ala-rich region (GPA1), a 55-residue Src homology 3 (SH3) domain, and a C-terminal 135-residue Gly/Pro/Ala-rich region (GPA2). Cryo-electron microscopy of AMIC had shown previously that the AMIC tail is folded back on itself, suggesting the possibility of interactions between its N- and C-terminal regions. We now show specific differences between the NMR spectrum of bacterially expressed full-length tail and the sum of the spectra of individually expressed BR and GPA1-SH3-GPA2 (GSG) regions. These results are indicative of interactions between the two subdomains in the full-length tail. From the NMR data, we could assign many of the residues in BR and GSG that are involved in these interactions. By combining homology modeling with the NMR data, we identify a putative pleckstrin homology (PH) domain within BR, and show that the PH domain interacts with the SH3 domain.


Asunto(s)
Acanthamoeba/química , Proteínas Sanguíneas/química , Miosina Tipo I/química , Miosina Tipo I/metabolismo , Fosfoproteínas/química , Dominios Homologos src , Acanthamoeba/genética , Secuencia de Aminoácidos , Animales , Secuencia Conservada , Modelos Moleculares , Datos de Secuencia Molecular , Miosina Tipo I/clasificación , Miosina Tipo I/genética , Resonancia Magnética Nuclear Biomolecular , Alineación de Secuencia , Homología Estructural de Proteína
19.
Tsitologiia ; 48(8): 691-4, 2006.
Artículo en Ruso | MEDLINE | ID: mdl-17147262

RESUMEN

A heat shock protein of HSP70 family was revealed for the first time in trophozoites of Acanthamoeba sp. (strain Am8) excysted from cysts previously isolated from samples of permafrost aging 30,000-35,000 years. The constitutive level of this HSP, shown by immunnoblotting in unstressed trophozoites of the ancient acanthamoebae, much surpassed that in unstressed cells of the three examined species of contemporary freshwater amebae of the genus Amoeba.


Asunto(s)
Acanthamoeba/química , Amoeba/química , Proteínas HSP70 de Choque Térmico/aislamiento & purificación , Animales , Fósiles , Immunoblotting
20.
Exp Parasitol ; 110(2): 114-22, 2005 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-15888293

RESUMEN

Coronin, described in organisms from yeasts to humans, has been found to be involved in various actin-associated activities. It has yet to be described in Acanthamoeba, medically significant as the causative agent of granulomatous amebic encephalitis and amoebic keratitis and used extensively in actin-related studies. We isolated and characterized a cDNA encoding a coronin-like protein in A. healyi by sequence analysis and demonstrated intracellular localization of the gene product by transient transfection. Named Ahcoronin, the gene is composed of 454 amino acids which contain the characteristic WD repeats of coronin and coronin-like proteins. The C-terminal region of the gene was also predicted to have a high tendency of forming a coiled-coil, another structural characteristic of coronin. The gene showed a 50% homology to coronins. Ahcoronin occurs as a single copy and expressed as a transcript of approximately 1.4kb in A. healyi. Results of transfection showed that Ahcoronin was localized in the cell's periphery and in the leading edge consistent to that of actin. The fusion protein has also been observed to localize around phagocytic cups but was disassembled later during phagocytosis. Sequence analysis of Ahcoronin homologue of A. healyi showed numerous potential for further studies and is sure to contribute in the growing interest toward the properties and functions of coronin and coronin-like proteins.


Asunto(s)
Acanthamoeba/genética , Actinas/genética , ADN Protozoario/química , Proteínas de Microfilamentos/genética , Proteínas Protozoarias/genética , Acanthamoeba/química , Acanthamoeba/clasificación , Actinas/química , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Northern Blotting , Southern Blotting , Clonación Molecular , ADN Complementario/química , Vectores Genéticos , Proteínas Fluorescentes Verdes/análisis , Humanos , Proteínas de Microfilamentos/química , Microscopía Fluorescente , Datos de Secuencia Molecular , Fagocitosis , Filogenia , Proteínas Protozoarias/química , Alineación de Secuencia , Análisis de Secuencia de ADN , Homología de Secuencia de Aminoácido , Transfección
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