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1.
Biochem Pharmacol ; 189: 114374, 2021 07.
Artículo en Inglés | MEDLINE | ID: mdl-33358826

RESUMEN

We report here the evaluation of a novel in vitro experimental model, prolonged cultured human hepatocytes (PCHC), as an experimental system to evaluate the potency and duration of effects of oligonucleotide therapeutics. A novel observation was made on the redifferentiation of PCHC upon prolonged culturing based on mRNA profiling of characteristic hepatic differentiation marker genes albumin, transferrin, and transthyretin. Consistent with the known de-differentiation of cultured human hepatocytes, decreases in marker gene expression were observed upon culturing of the hepatocytes for 2 days. A novel observation of re-differentiation was observed on day 7 as demonstrated by an increase in expression of the marker genes to levels similar to that observed on the first day of culture. The expression of the differentiation marker genes was highest on day 7, followed by a gradual decrease but remained higher than that on day 2 for up to the longest culture duration evaluated of 41 days. The redifferentiation phenomenon suggests that PCHC may be useful for the evaluation of the duration of effects of oligonucleotide therapeutics on gene expression in human hepatocytes. A proof of concept study was thereby conducted with PCHC with a GalNAc-conjugated siRNA targeting human hypoxanthine phosphoribosyl transferase1 (HPRT1). HPRT1 mRNA expression in siRNA-treated cultures decreased to 21% of that in untreated hepatocytes on day 1, <10% from days 2 to 12, <20% from days 16 to 33, and eventually recovered to 64% by day 41. Our results suggest that PCHC represent a clinically-relevant cost- and time-efficient experimental tool to aid in the evaluation of GalNAc-siRNA silencing activity, providing information on both efficacy and duration of efficacy. PCHC may be applicable in the drug development setting as a species- and cell type-relevant experimental tool to aid the development of oligonucleotide therapeutics.


Asunto(s)
Acetilgalactosamina/biosíntesis , Técnicas de Cultivo de Célula/métodos , Silenciador del Gen/fisiología , Hepatocitos/metabolismo , Hipoxantina Fosforribosiltransferasa/biosíntesis , ARN Interferente Pequeño/administración & dosificación , Acetilgalactosamina/antagonistas & inhibidores , Acetilgalactosamina/genética , Células Cultivadas , Evaluación Preclínica de Medicamentos/métodos , Silenciador del Gen/efectos de los fármacos , Hepatocitos/efectos de los fármacos , Humanos , Hipoxantina Fosforribosiltransferasa/antagonistas & inhibidores , Hipoxantina Fosforribosiltransferasa/genética , ARN Interferente Pequeño/genética
2.
J Biol Chem ; 294(9): 2997-3011, 2019 03 01.
Artículo en Inglés | MEDLINE | ID: mdl-30591584

RESUMEN

Biological functions of nuclear proteins are regulated by post-translational modifications (PTMs) that modulate gene expression and cellular physiology. However, the role of O-linked glycosylation (O-GalNAc) as a PTM of nuclear proteins in the human cell has not been previously reported. Here, we examined in detail the initiation of O-GalNAc glycan biosynthesis, representing a novel PTM of nuclear proteins in the nucleus of human cells, with an emphasis on HeLa cells. Using soluble nuclear fractions from purified nuclei, enzymatic assays, fluorescence microscopy, affinity chromatography, MS, and FRET analyses, we identified all factors required for biosynthesis of O-GalNAc glycans in nuclei: the donor substrate (UDP-GalNAc), nuclear polypeptide GalNAc -transferase activity, and a GalNAc transferase (polypeptide GalNAc-T3). Moreover, we identified O-GalNAc glycosylated proteins in the nucleus and present solid evidence for O-GalNAc glycan synthesis in this organelle. The demonstration of O-GalNAc glycosylation of nuclear proteins in mammalian cells reported here has important implications for cell and chemical biology.


Asunto(s)
Acetilgalactosamina/biosíntesis , Acetilgalactosamina/química , Núcleo Celular/metabolismo , Polisacáridos/química , Transporte Activo de Núcleo Celular , Línea Celular Tumoral , Glicosilación , Humanos , Lamina Tipo B/metabolismo , N-Acetilgalactosaminiltransferasas/metabolismo , Polipéptido N-Acetilgalactosaminiltransferasa
3.
J Bacteriol ; 200(10)2018 05 15.
Artículo en Inglés | MEDLINE | ID: mdl-29507091

RESUMEN

Most organisms, from Bacteria to Eukarya, synthesize UDP-N-acetylglucosamine (UDP-GlcNAc) from fructose-6-phosphate via a four-step reaction, and UDP-N-acetylgalactosamine (UDP-GalNAc) can only be synthesized from UDP-GlcNAc by UDP-GlcNAc 4-epimerase. In Archaea, the bacterial-type UDP-GlcNAc biosynthetic pathway was reported for Methanococcales. However, the complete biosynthetic pathways for UDP-GlcNAc and UDP-GalNAc present in one archaeal species are unidentified. Previous experimental analyses on enzymatic activities of the ST0452 protein, identified from the thermophilic crenarchaeon Sulfolobus tokodaii, predicted the presence of both a bacterial-type UDP-GlcNAc and an independent UDP-GalNAc biosynthetic pathway in this archaeon. In the present work, functional analyses revealed that the recombinant ST2186 protein possessed an glutamine:fructose-6-phosphate amidotransferase activity and that the recombinant ST0242 protein possessed a phosphoglucosamine-mutase activity. Along with the acetyltransferase and uridyltransferase activities of the ST0452 protein, the activities of the ST2186 and ST0242 proteins confirmed the presence of a bacterial-type UDP-GlcNAc biosynthetic pathway in S. tokodaii In contrast, the UDP-GlcNAc 4-epimerase homologue gene was not detected within the genomic data. Thus, it was expected that galactosamine-1-phosphate or galactosamine-6-phosphate (GalN-6-P) was provided by conversion of glucosamine-1-phosphate or glucosamine-6-phosphate (GlcN-6-P). A novel epimerase converting GlcN-6-P to GalN-6-P was detected in a cell extract of S. tokodaii, and the N-terminal sequence of the purified protein indicated that the novel epimerase was encoded by the ST2245 gene. Along with the ST0242 phosphogalactosamine-mutase activity, this observation confirmed the presence of a novel UDP-GalNAc biosynthetic pathway from GlcN-6-P in S. tokodaii Discovery of the novel pathway provides a new insight into the evolution of nucleotide sugar metabolic pathways.IMPORTANCE In this work, a novel protein capable of directly converting glucosamine-6-phosphate to galactosamine-6-phosphate was successfully purified from a cell extract of the thermophilic crenarchaeon Sulfolobus tokodaii Confirmation of this novel activity using the recombinant protein indicates that S. tokodaii possesses a novel UDP-GalNAc biosynthetic pathway derived from glucosamine-6-phosphate. The distributions of this and related genes indicate the presence of three different types of UDP-GalNAc biosynthetic pathways: a direct pathway using a novel enzyme and two conversion pathways from UDP-GlcNAc using known enzymes. Additionally, Crenarchaeota species lacking all three pathways were found, predicting the presence of one more unknown pathway. Identification of these novel proteins and pathways provides important insights into the evolution of nucleotide sugar biosynthesis, as well as being potentially important industrially.


Asunto(s)
Acetilgalactosamina/biosíntesis , Proteínas Arqueales/metabolismo , Glutamina-Fructosa-6-Fosfato Transaminasa (Isomerizadora)/metabolismo , Fosfoglucomutasa/metabolismo , Sulfolobus/enzimología , Uridina Difosfato N-Acetilglucosamina/biosíntesis , Acetiltransferasas/genética , Acetiltransferasas/metabolismo , Proteínas Arqueales/genética , Vías Biosintéticas , Galactosamina/análogos & derivados , Galactosamina/metabolismo , Glucosamina/análogos & derivados , Glucosamina/metabolismo , Glucosa-6-Fosfato/análogos & derivados , Glucosa-6-Fosfato/metabolismo , Glucofosfatos/metabolismo , Glutamina-Fructosa-6-Fosfato Transaminasa (Isomerizadora)/genética , Fosfatos/metabolismo , Fosfoglucomutasa/genética , Sulfolobus/genética
4.
Nat Commun ; 9(1): 405, 2018 01 26.
Artículo en Inglés | MEDLINE | ID: mdl-29374258

RESUMEN

Many eukaryotic proteins are anchored to the cell surface via the glycolipid glycosylphosphatidylinositol (GPI). Mammalian GPIs have a conserved core but exhibit diverse N-acetylgalactosamine (GalNAc) modifications, which are added via a yet unresolved process. Here we identify the Golgi-resident GPI-GalNAc transferase PGAP4 and show by mass spectrometry that PGAP4 knockout cells lose GPI-GalNAc structures. Furthermore, we demonstrate that PGAP4, in contrast to known Golgi glycosyltransferases, is not a single-pass membrane protein but contains three transmembrane domains, including a tandem transmembrane domain insertion into its glycosyltransferase-A fold as indicated by comparative modeling. Mutational analysis reveals a catalytic site, a DXD-like motif for UDP-GalNAc donor binding, and several residues potentially involved in acceptor binding. We suggest that a juxtamembrane region of PGAP4 accommodates various GPI-anchored proteins, presenting their acceptor residue toward the catalytic center. In summary, we present insights into the structure of PGAP4 and elucidate the initial step of GPI-GalNAc biosynthesis.


Asunto(s)
Acetilgalactosamina/química , Glicosilfosfatidilinositoles/química , Aparato de Golgi/metabolismo , N-Acetilgalactosaminiltransferasas/química , Acetilgalactosamina/biosíntesis , Secuencias de Aminoácidos , Animales , Células CHO , Dominio Catalítico , Cricetulus , Cristalografía por Rayos X , Expresión Génica , Vectores Genéticos/química , Vectores Genéticos/metabolismo , Glicosilfosfatidilinositoles/metabolismo , Aparato de Golgi/ultraestructura , Humanos , Ratones , Ratones Noqueados , Modelos Moleculares , Mutación , N-Acetilgalactosaminiltransferasas/genética , N-Acetilgalactosaminiltransferasas/metabolismo , Unión Proteica , Conformación Proteica en Hélice alfa , Conformación Proteica en Lámina beta , Dominios y Motivos de Interacción de Proteínas , Homología Estructural de Proteína , Especificidad por Sustrato , Polipéptido N-Acetilgalactosaminiltransferasa
5.
Microbiology (Reading) ; 164(2): 217-220, 2018 02.
Artículo en Inglés | MEDLINE | ID: mdl-29300154

RESUMEN

The structures of capsular polysaccharides (CPSs) produced by different Acinetobacter baumannii strains have proven to be invaluable in confirming the role of specific genes in the synthesis of rare sugars through the correlation of genetic content at the CPS biosynthesis locus with sugars found in corresponding CPS structures. A module of four genes (rmlA, rmlB, vioA and vioB) was identified in the KL57 capsule biosynthesis gene cluster of A. baumannii isolate BAL_212 from Vietnam. These genes were predicted to direct the synthesis of 4-acetamido-4,6-dideoxy-d-glucose (N-acetylviosamine, d-Qui4NAc) and the K57 CPS was found to contain this monosaccharide. The K57 structure was determined and, in addition to d-Qui4NAc, included three N-acetylgalactosamine residues in the main chain, with a single glucose side branch. The KL57 gene cluster has not been found in any other A. baumannii genomes, but the rmlA-rmlB-vioA-vioB module is present in the KL119 gene cluster that would likely produce a d-Qui4NAc-containing CPS.


Asunto(s)
Acinetobacter baumannii/citología , Amino Azúcares/biosíntesis , Cápsulas Bacterianas/química , Familia de Multigenes/genética , Polisacáridos Bacterianos/química , Polisacáridos Bacterianos/genética , Acetilgalactosamina/biosíntesis , Acinetobacter baumannii/genética , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Genes Bacterianos/genética
6.
Microbiology (Reading) ; 163(3): 355-363, 2017 03.
Artículo en Inglés | MEDLINE | ID: mdl-28356169

RESUMEN

The whole-genome sequence of the multiply antibiotic resistant Acinetobacter baumannii isolate RCH51 belonging to sequence type ST103 (Institut Pasteur scheme) revealed that the set of genes at the capsule locus, KL24, includes four genes predicted to direct the synthesis of 3-acetamido-3,6-dideoxy-d-galactose (d-Fuc3NAc), and this sugar was found in the capsular polysaccharide (CPS). One of these genes, fdtE, encodes a novel bifunctional protein with an N-terminal FdtA 3,4-ketoisomerase domain and a C-terminal acetyltransferase domain. KL24 lacks a gene encoding a Wzy polymerase to link the oligosaccharide K units to form the CPS found associated with isolate RCH51, and a wzy gene was found in a small genomic island (GI) near the cpn60 gene. This GI is in precisely the same location as another GI carrying wzy and atr genes recently found in several A. baumannii isolates, but it does not otherwise resemble it. The CPS isolated from RCH51, studied by sugar analysis and 1D and 2D 1H and 13C NMR spectroscopy, revealed that the K unit has a branched pentasaccharide structure made up of Gal, GalNAc and GlcNAc residues with d-Fuc3NAc as a side branch, and the K units are linked via a ß-d-GlcpNAc-(1→3)-ß-d-Galp linkage formed by the Wzy encoded by the GI. The functions of the glycosyltransferases encoded by KL24 were assigned to formation of specific bonds. A correspondence between the order of the genes in KL24 and other KL and the order of the linkages they form was noted, and this may be useful in future predictions of glycosyltransferase specificities.


Asunto(s)
Acinetobacter baumannii/genética , Cápsulas Bacterianas/genética , Proteínas Bacterianas/genética , Glicosiltransferasas/genética , Proteínas de la Membrana/genética , Polisacáridos Bacterianos/biosíntesis , Acetilgalactosamina/análogos & derivados , Acetilgalactosamina/biosíntesis , Acinetobacter baumannii/efectos de los fármacos , Acinetobacter baumannii/aislamiento & purificación , Farmacorresistencia Bacteriana Múltiple/genética , Fucosa/análogos & derivados , Fucosa/biosíntesis , Genoma Bacteriano/genética , Islas Genómicas/genética , Humanos , Proteínas de la Membrana/biosíntesis , Familia de Multigenes/genética
7.
Biochemistry ; 52(46): 8374-85, 2013 Nov 19.
Artículo en Inglés | MEDLINE | ID: mdl-24128043

RESUMEN

Unusual N-acetylated sugars have been observed on the O-antigens of some Gram-negative bacteria and on the S-layers of both Gram-positive and Gram-negative bacteria. One such sugar is 3-acetamido-3,6-dideoxy-α-d-galactose or Fuc3NAc. The pathway for its production requires five enzymes with the first step involving the attachment of dTMP to glucose-1-phosphate. Here, we report a structural and biochemical characterization of a bifunctional enzyme from Shewanella denitificans thought to be involved in the biosynthesis of dTDP-Fuc3NAc. On the basis of a bioinformatics analysis, the enzyme, hereafter referred to as FdtD, has been postulated to catalyze the third and fifth steps in the pathway, namely, a 3,4-keto isomerization and an N-acetyltransferase reaction. For the X-ray analysis reported here, the enzyme was crystallized in the presence of dTDP and CoA. The crystal structure shows that FdtD adopts a hexameric quaternary structure with 322 symmetry. Each subunit of the hexamer folds into two distinct domains connected by a flexible loop. The N-terminal domain adopts a left-handed ß-helix motif and is responsible for the N-acetylation reaction. The C-terminal domain folds into an antiparallel flattened ß-barrel that harbors the active site responsible for the isomerization reaction. Biochemical assays verify the two proposed catalytic activities of the enzyme and reveal that the 3,4-keto isomerization event leads to the inversion of configuration about the hexose C-4' carbon.


Asunto(s)
Acetilgalactosamina/análogos & derivados , Acetiltransferasas/química , Proteínas Bacterianas/química , Carbohidrato Epimerasas/química , Desoxiazúcares/biosíntesis , Fucosa/análogos & derivados , Oxidorreductasas Intramoleculares/química , Enzimas Multifuncionales/química , Shewanella/enzimología , Acetilgalactosamina/biosíntesis , Acetiltransferasas/metabolismo , Proteínas Bacterianas/metabolismo , Carbohidrato Epimerasas/metabolismo , Dominio Catalítico , Cristalografía por Rayos X , Fucosa/biosíntesis , Oxidorreductasas Intramoleculares/metabolismo , Modelos Moleculares , Enzimas Multifuncionales/metabolismo , Estructura Cuaternaria de Proteína , Nucleótidos de Timina/metabolismo
8.
J Biol Chem ; 285(27): 20793-805, 2010 Jul 02.
Artículo en Inglés | MEDLINE | ID: mdl-20439988

RESUMEN

Chondroitin sulfate (CS) and dermatan sulfate (DS) containing N-acetylgalactosamine 4,6-bissulfate (GalNAc(4,6-SO(4))) show various physiological activities through interacting with numerous functional proteins. N-Acetylgalactosamine 4-sulfate 6-O-sulfotransferase (GalNAc4S-6ST) transfers sulfate from 3'-phosphoadenosine 5'-phosphosulfate to position 6 of N-acetylgalactosamine 4-sulfate in CS or DS to yield GalNAc(4,6-SO(4)) residues. We here report generation of transgenic mice that lack GalNAc4S-6ST. GalNAc4S-6ST-null mice were born normally and fertile. In GalNAc4S-6ST-null mice, GalNAc(4,6-SO(4)) residues in CS and DS disappeared completely, indicating that GalNAc4S-6ST should be a sole enzyme responsible for the synthesis of GalNAc(4,6-SO(4)) residues in both CS and DS. IdoA-GalNAc(4,6-SO(4)) units that account for approximately 40% of total disaccharide units of DS in the liver of the wild-type mice disappeared in the liver DS of GalNAc4S-6ST-null mice without reduction of IdoA content. Bone marrow-derived mast cells (BMMCs) derived from GalNAc4S-6ST-null mice contained CS without GlcA-GalNAc(4,6-SO(4)) units. Tryptase and carboxypeptidase A activities of BMMCs derived from GalNAc4S-6ST-null mice were lower than those activities of BMMCs derived from wild-type mice, although mRNA expression of these mast cell proteases was not altered. Disaccharide compositions of heparan sulfate/heparin contained in the mast cells derived from BMMCs in the presence of stem cell factor were much different from those of heparan sulfate/heparin in BMMCs but did not differ significantly between wild-type mice and GalNAc4S-6ST-null mice. These observations suggest that CS containing GalNAc(4,6-SO(4)) residues in BMMCs may contribute to retain the active proteases in the granules of BMMCs but not for the maturation of BMMCs into connective tissue-type mast cells.


Asunto(s)
Acetilgalactosamina/análogos & derivados , Médula Ósea/enzimología , Sulfatos de Condroitina/biosíntesis , Dermatán Sulfato/biosíntesis , Glicosaminoglicanos/biosíntesis , Péptido Hidrolasas/metabolismo , ARN Mensajero/genética , Sulfotransferasas/deficiencia , Acetilgalactosamina/biosíntesis , Acetilgalactosamina/química , Animales , Médula Ósea/ultraestructura , Sulfatos de Condroitina/química , ADN/genética , Cartilla de ADN , Dermatán Sulfato/química , Disacáridos/análisis , Exones/genética , Vectores Genéticos , Mastocitos/enzimología , Mastocitos/ultraestructura , Ratones , Microscopía Electrónica , Reacción en Cadena de la Polimerasa , Bazo/enzimología , Sulfotransferasas/genética
9.
Biochemistry ; 48(6): 1173-82, 2009 Feb 17.
Artículo en Inglés | MEDLINE | ID: mdl-19166326

RESUMEN

Lipid A of Francisella tularensis subsp. novicida contains a galactosamine (GalN) residue linked to its 1-phosphate group. As shown in the preceding paper, this GalN unit is transferred to lipid A from the precursor undecaprenyl phosphate-beta-D-GalN. A small portion of the free lipid A of Francisella novicida is further modified with a glucose residue at position-6'. We now demonstrate that the two F. novicida homologues of Escherichia coli ArnC, designated FlmF1 and FlmF2, are essential for lipid A modification with glucose and GalN, respectively. Recombinant FlmF1 expressed in E. coli selectively condenses undecaprenyl phosphate and UDP-glucose in vitro to form undecaprenyl phosphate-glucose. Recombinant FlmF2 selectively catalyzes the condensation of undecaprenyl phosphate and UDP-N-acetylgalactosamine to generate undecaprenyl phosphate-N-acetylgalactosamine. On the basis of an analysis of the lipid A composition of flmF1 and flmF2 mutants of F. novicida, we conclude that FlmF1 generates the donor substrate for the modification of F. novicida free lipid A with glucose, whereas FlmF2 generates the immediate precursor of the GalN donor substrate, undecaprenyl phosphate-beta-D-GalN. A novel deacetylase, present in membranes of F. novicida, removes the acetyl group from undecaprenyl phosphate-N-acetylgalactosamine to yield undecaprenyl phosphate-beta-D-GalN. This deacetylase may have an analogous function to the deformylase that generates undecaprenyl phosphate-4-amino-4-deoxy-alpha-l-arabinose from undecaprenyl phosphate-4-deoxy-4-formylamino-alpha-l-arabinose in polymyxin-resistant strains of E. coli and Salmonella typhimurium.


Asunto(s)
Acetilgalactosamina/biosíntesis , Francisella/metabolismo , Galactosamina/análogos & derivados , Glucósidos/biosíntesis , Fosfatos de Poliisoprenilo/biosíntesis , Acetilgalactosamina/química , Acetiltransferasas/metabolismo , Proteínas Bacterianas/metabolismo , Membrana Celular/enzimología , Cromatografía Liquida , Escherichia coli/metabolismo , Francisella/enzimología , Francisella/genética , Galactosamina/biosíntesis , Galactosamina/química , Glucósidos/química , Lípido A/química , Lípido A/aislamiento & purificación , Lípido A/metabolismo , Familia de Multigenes , Mutación/genética , Fosfatos de Poliisoprenilo/química , Proteínas Recombinantes/metabolismo , Espectrometría de Masa por Ionización de Electrospray
10.
Gene ; 357(1): 73-82, 2005 Aug 29.
Artículo en Inglés | MEDLINE | ID: mdl-15951138

RESUMEN

The flagellated protozoan Giardia intestinalis is one of the most prevalent human-infective parasites with a worldwide distribution. This parasite must encyst to complete the life cycle and N-acetylgalactosamine is produced from endogenous glucose for cyst wall synthesis during the transformation. UDP-N-acetylglucosamine pyrophosphorylase in G. intestinalis (GiUAP, EC 2.7.7.23) is the fourth enzyme in the inducible pathway of N-acetylgalactosamine biosynthesis, catalysing the conversion of N-acetylglucosamine-1-P to UDP-N-acetylglucosamine. In this study the gene GiUAP was cloned and sequenced from the Portland 1 strain using PCR techniques. It has an ORF of approximately 1.3 kb and contains no introns. BLAST and ClustalW analysis of the deduced amino acid sequence revealed significant similarities to other eukaryotic UAPs with putative active sites identified. Southern hybridization showed that GiUAP exists as a single-copy gene and it was shown to have two transcripts by RT-PCR and Northern hybridization. RLM-RACE identified both 5' and 3' untranslated regions and suggested the transcripts exist as a 5'-capped mRNA, with the use of two tandem polyadenylation sites to generate two unusually long giardial 3' untranslated regions of approximately 522 bp and approximately 3 kb. Moreover, a recombinant protein (rGiUAP) was expressed in E. coli and subjected to physical characterizations. Surprisingly the results obtained in this study were significantly different from those reported for the GiUAP in MR4 strain, suggesting this gene is under different transcription control in different strains of G. intestinalis. This report describes the molecular characterization of GiUAP and provides an opportunity to explore the control of gene expression during encystation of the parasite.


Asunto(s)
Regulación Enzimológica de la Expresión Génica/fisiología , Giardia lamblia/enzimología , Nucleotidiltransferasas/genética , Sistemas de Lectura Abierta/fisiología , Proteínas Protozoarias/genética , Regiones no Traducidas 3'/genética , Regiones no Traducidas 5'/genética , Acetilgalactosamina/biosíntesis , Animales , Secuencia de Bases , Pared Celular/enzimología , Pared Celular/genética , Dosificación de Gen , Giardia lamblia/genética , Giardiasis/enzimología , Giardiasis/genética , Glucosa/metabolismo , Humanos , Intrones/genética , Datos de Secuencia Molecular , Nucleotidiltransferasas/metabolismo , Poliadenilación/fisiología , Reacción en Cadena de la Polimerasa/métodos , Proteínas Protozoarias/metabolismo
11.
J Biochem ; 135(1): 101-7, 2004 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-14999015

RESUMEN

CEL-I is a C-type lectin isolated from the Holothuroidea Cucumaria echinata. This lectin shows very high N-acetylgalactosamine-binding specificity. We constructed an artificial gene encoding recombinant CEL-I (rCEL-I) using a combination of synthetic oligonucleotides, and expressed it in Escherichia coli cells. Since the recombinant protein was obtained as inclusion bodies, the latter were solubilized using urea and 2-mercaptoethanol, and the protein was refolded during the purification and dialysis steps. The purified rCEL-I showed comparable hemagglutinating activity to that of native CEL-I at relatively high Ca(2+)-concentrations, whereas it was weaker at lower Ca(2+)-concentrations due to decreased Ca(2+)-binding affinity. rCEL-I exhibited similar carbohydrate-binding specificity to native CEL-I, including strong GalNAc-binding specificity, as examined by hemagglutination inhibition assay. Comparison of the far UV-CD spectra of recombinant and native CEL-I revealed that the two proteins undergo a similar conformational change upon binding of Ca(2+). Single crystals of rCEL-I were also obtained under the same conditions as those used for the native protein, suggesting that they have similar tertiary structures. Although native CEL-I exhibited strong cytotoxicity toward cultured cells, rCEL-I showed low cytotoxicity. These results indicate that rCEL-I has a tertiary structure and carbohydrate-binding specificity similar to those of native CEL-I. Howeger, there is a subtle difference in the properties between the two proteins probably due to the additional methionine residue at the N-terminus of rCEL-I.


Asunto(s)
Acetilgalactosamina/biosíntesis , Escherichia coli/genética , Escherichia coli/metabolismo , Genes Sintéticos , Lectinas Tipo C/biosíntesis , Lectinas Tipo C/química , Acetilgalactosamina/genética , Secuencia de Aminoácidos , Secuencia de Bases , Cristalización , Relación Dosis-Respuesta a Droga , Células HeLa , Hemaglutininas/biosíntesis , Hemaglutininas/química , Hemaglutininas/genética , Humanos , Lectinas Tipo C/genética , Lectinas Tipo C/fisiología , Datos de Secuencia Molecular , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/toxicidad , Difracción de Rayos X
12.
J Biol Chem ; 278(29): 26410-7, 2003 Jul 18.
Artículo en Inglés | MEDLINE | ID: mdl-12740380

RESUMEN

The glycan chain of the S-layer protein of Aneurinibacillus thermoaerophilus L420-91T (DSM 10154) consists of d-rhamnose and 3-acetamido-3,6-dideoxy-d-galactose (d-Fucp3NAc). Thymidine diphosphate-activated d-Fucp3NAc serves as precursor for the assembly of structural polysaccharides in Gram-positive and Gram-negative organisms. The biosynthesis of dTDP-3-acetamido-3,6-dideoxy-alpha-d-galactose (dTDP-d-Fucp3NAc) involves five enzymes. The first two steps of the reaction are catalyzed by enzymes that are part of the well studied dTDP-l-rhamnose biosynthetic pathway, namely d-glucose-1-phosphate thymidyltransferase (RmlA) and dTDP-d-glucose-4,6-dehydratase (RmlB). The enzymes catalyzing the last three synthesis reactions have not been characterized biochemically so far. These steps include an isomerase, a transaminase, and a transacetylase. We identified all five genes involved by chromosome walking in the Gram-positive organism A. thermoaerophilus L420-91T and overexpressed the three new enzymes heterologously in Escherichia coli. The activities of these enzymes were monitored by reverse phase high performance liquid chromatography, and the intermediate products formed were characterized by 1H and 13C nuclear magnetic resonance spectroscopy analysis. Alignment of the newly identified proteins with known sequences revealed that the elucidated pathway in this Gram-positive organism may also be valid in the biosynthesis of the O-antigen of lipopolysaccharides of Gram-negative organisms. The key enzyme in the biosynthesis of dTDP-d-Fucp3NAc has been identified as an isomerase, which converts the 4-keto educt into the 3-keto product, with concomitant epimerization at C-4 to produce a 6-deoxy-d-xylo configuration. This is the first report of the functional characterization of the biosynthesis of dTDP-d-Fucp3NAc and description of a novel type of isomerase capable of synthesizing dTDP-6-deoxy-d-xylohex-3-ulose from dTDP-6-deoxy-d-xylohex-4-ulose.


Asunto(s)
Acetilgalactosamina/biosíntesis , Bacillaceae/metabolismo , Nucleótidos de Timina/biosíntesis , Acetilgalactosamina/análogos & derivados , Secuencia de Aminoácidos , Bacillaceae/enzimología , Bacillaceae/genética , Secuencia de Bases , Carbohidrato Epimerasas/genética , Carbohidrato Epimerasas/metabolismo , ADN Bacteriano/genética , Genes Bacterianos , Hidroliasas/genética , Hidroliasas/metabolismo , Datos de Secuencia Molecular , Familia de Multigenes , Resonancia Magnética Nuclear Biomolecular , Nucleotidiltransferasas/genética , Nucleotidiltransferasas/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Mapeo Restrictivo , Homología de Secuencia de Aminoácido
13.
J Exp Zool ; 290(7): 769-76, 2001 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-11748625

RESUMEN

The present investigation demonstrates that in squamate reptiles, as already reported for Podarcis sicula (Andreuccetti et al., 2001), the differentiation of pyriform cells from small, stem follicle cells is characterized by the progressive appearance on the cell surface of glycoproteins bearing alpha-GalNAc terminated O-linked side chains. Using a lectin panel (WGA, GSI-A4, GSI-B4, PSA UEA-I, PNA, Con-A, DBA, LCA, BPA, SBA), we demonstrated that, during previtellogenesis, the pattern of distribution of DBA binding sites over the follicular epithelium dramatically changes. In fact, binding sites first appear in follicular epithelium at the time that small cells begin to differentiate; in such follicles, labeling is evident on the cell surfaces of small and intermediate cells. Later on, as the differentiation progresses, the binding sites also become evident on the cell surface of pyriform cells. Once differentiated, the pattern of the distribution of DBA binding sites over the follicular epithelium does not change. By contrast, during the phase of intermediate and pyriform cell regression, DBA binding sites gradually decrease, so that the monolayered follicular epithelium of vitellogenic follicles, constituted only by small cells, shows no binding sites for DBA. It is noteworthy that binding sites for DBA are present on small cells located in contact with the oocyte membrane, but not on those located under the basal lamina or among pyriform cells, and therefore not engaged in the differentiation into pyriform cells. This finding demonstrates that, in squamates, the pattern of distribution of alpha-N-GalNAc containing glycoproteins significantly changes during previtellogenesis, and that these modifications are probably related to the differentiation of small stem cells into highly specialized pyriforms.


Asunto(s)
Acetilgalactosamina/biosíntesis , Diferenciación Celular , Lagartos/fisiología , Glicoproteínas de Membrana/biosíntesis , Oocitos/crecimiento & desarrollo , Folículo Ovárico/fisiología , Células Madre/fisiología , Acetilgalactosamina/análisis , Animales , Sitios de Unión , Femenino , Lectinas , Glicoproteínas de Membrana/análisis , Vitelogénesis
14.
Br J Cancer ; 85(7): 1014-22, 2001 Sep 28.
Artículo en Inglés | MEDLINE | ID: mdl-11592774

RESUMEN

Over-expression of N-acetylgalactosamine glycoproteins as detected by binding of the lectin from Helix pomatia (HPA), is associated with metastatic competence and poor patient prognosis in a range of human adenocarcinomas. These glycoproteins remain poorly characterised, and their functional role has yet to be elucidated. This study describes characterisation of a range of human breast/breast cancer cell lines for the expression of the N-acetylgalactosaminylated glycoproteins of interest, and their comparison with normal breast epithelium and a range of clinical breast carcinoma samples. Confocal and light microscopy studies revealed cytochemical HPA-binding patterns consistent with a fundamental disruption in normal glycobiosynthetic pathways attending increasing metastatic potential. We report the most complete comparative analysis of HPA-binding ligands from cultured breast cells, clinical breast carcinoma samples and normal breast epithelium to date. Lectin blotting identified 11 major HPA-binding glycoprotein bands common to both clinical tumour samples and breast cell lines and 6 of these bands were also expressed by samples of normal breast epithelium, albeit at much lower levels. Moreover, very marked quantitative but not qualitative differences in levels of expression consistent with metastatic capability were noted.


Asunto(s)
Acetilgalactosamina/análogos & derivados , Acetilgalactosamina/biosíntesis , Biomarcadores de Tumor/análisis , Neoplasias de la Mama/genética , Carcinoma/genética , Regulación Neoplásica de la Expresión Génica , Glicoproteínas/genética , Lectinas , Mama/citología , Neoplasias de la Mama/fisiopatología , Carcinoma/fisiopatología , Femenino , Glicoproteínas/biosíntesis , Humanos , Metástasis de la Neoplasia , Células Tumorales Cultivadas
15.
J Biol Chem ; 276(29): 26988-94, 2001 Jul 20.
Artículo en Inglés | MEDLINE | ID: mdl-11356829

RESUMEN

Based on sequence homology with the previously cloned human cerebroside sulfotransferase (CST) cDNA, a novel sulfotransferase was cloned by screening a human fetal brain cDNA library. The novel sulfotransferase gene was present on human chromosome 11q13; the location was different from human CST and from that of the recently cloned human beta-Gal 3'-sulfotransferase (GP3ST). The isolated cDNA contained an open reading frame that encoded a predicted protein of 431 amino acid residues with type II transmembrane topology. The amino acid sequence showed 33% identity with that of human CST and 38% with that of human GP3ST. The recombinant enzyme expressed in Chinese hamster ovary cells catalyzed transfer of sulfate to position 3 of non-reducing beta-galactosyl residues in Galbeta1-4GlcNAc. Type 2 chains served as good acceptors, whereas type 1 chains served as poor acceptors, and intermediate activity was found toward Galbeta1-3GalNAc. Therefore, the substrate specificity was different from that of GP3ST. CST activity was not detected in the newly cloned enzyme. Northern blotting analysis showed that the sulfotransferase mRNA was strongly expressed in the thyroid and moderately expressed in the brain, heart, kidney, and spinal cord. Co-transfection of the enzyme cDNA and fucosyltransferase III into COS-7 cells resulted in expression of (SO(4)-3)Galbeta1-4(Fucalpha1-3)GlcNAc and a small amount of (SO(4)-3)Galbeta1-3(Fucalpha1-4)GlcNAc. These results indicated that the newly cloned enzyme is a novel Gal-3-O-sulfotransferase and is involved in biosynthesis of the (SO(4)-3)Galbeta1-4(Fucalpha1-3)GlcNAc structure.


Asunto(s)
Acetilgalactosamina/biosíntesis , Sulfotransferasas/genética , Acetilgalactosamina/análogos & derivados , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Células CHO , Células COS , Secuencia de Carbohidratos , Clonación Molecular , Cricetinae , ADN Complementario , Humanos , Datos de Secuencia Molecular , Homología de Secuencia de Aminoácido , Especificidad por Sustrato , Sulfotransferasas/química , Sulfotransferasas/metabolismo
17.
Prostate ; 19(2): 155-72, 1991.
Artículo en Inglés | MEDLINE | ID: mdl-1923963

RESUMEN

The present study examined the glycoconjugates of the lateral prostate using a battery of lectins. The results indicated that the secretory epithelium was rich in mannose (Man), N-acetylglucosamine (GlcNAc), galactose (Gal), N-acetylgalactosamine (GalNAc), and complex oligosaccharides. Con A (concanavalin A), LCA (Lens culinaris agglutinin), PSA (Pisum sativum agglutinin), WGA (wheat germ agglutinin), PWM (pokeweed mitogen), RCA-I (Racinus communis isolectin I), and PHA-P (Phaseolus vulgaris agglutinin-P) reacted intensely with both epithelia and stroma, while SBA (soybean agglutinin) and PNA (peanut agglutinin), which bind to terminal Gal, GalNAc, and Gal beta 1,3 GalNAc appeared to be specific to the secretory epithelium. SBA and PNA were useful as markers in the study of the secretory function of the prostate gland. The present study has shown that the Golgi apparatus of prostatic epithelial cells was rich in fucose (Fuc), oligomers of GlcNAc, Gal beta 1,3 GalNAc, Gal, and Man containing glycoconjugates, indicating that the gland was actively involved in glycosylation. The present study has also shown that LTA (Lotus tetragonolobus agglutinin) is a good marker for the epithelial Golgi. PNA also bound to the epithelial basement membrane and the connective tissue in the lamina propria. The present study has thus established, for the first time, the glycoconjugate patterns in the lateral prostate of the guinea pig.


Asunto(s)
Glicoconjugados/análisis , Lectinas de Plantas , Próstata/metabolismo , Acetilgalactosamina/biosíntesis , Acetilglucosamina/biosíntesis , Aglutininas , Animales , Concanavalina A , Epitelio/metabolismo , Matriz Extracelular/química , Galactosa/biosíntesis , Cobayas , Inmunohistoquímica , Lectinas , Masculino , Manosa/biosíntesis , Mitógenos de Phytolacca americana
18.
J Biol Chem ; 262(9): 4153-9, 1987 Mar 25.
Artículo en Inglés | MEDLINE | ID: mdl-3104337

RESUMEN

We have studied the subcellular site of synthesis of the GalNAc(alpha-1-0) Ser/Thr linkage in rat liver. The specific and total activities of polypeptide:N-acetylgalactosaminyltransferase (using apomucin as exogenous acceptor) were highly enriched in membrane fractions derived from the Golgi apparatus; virtually no activity was detected in membranes from the rough and smooth endoplasmic reticulum. Vesicles of the above organelles (which were sealed and of the same membrane topographical orientation as in vivo) were able to translocate UDP-GalNAc into their lumen in an assay in vitro; the initial translocation rate into Golgi vesicles was 4-6-fold higher than that into vesicles from the rough and smooth endoplasmic reticulum. Translocation of UDP-GalNAc into Golgi vesicles was temperature dependent and saturable with an apparent Km of 8-10 microM. UDP-GalNAc labeled with different radioisotopes in the uridine and sugar was used to determine that the intact sugar nucleotide was being translocated in a reaction coupled to the exit of luminal UMP. Following translocation of UDP-GalNAc, transfer of GalNAc into endogenous macromolecular acceptors was detected in Golgi vesicles and not in those from the rough and smooth endoplasmic reticulum. The above results together with previous studies on the O-xylosylation of the linkage region of proteoglycans (Nuwayhid, N., Glaser, J.H., Johnson, J.C., Conrad, H.E., Hauser, S.C., and Hirschberg, C.B. (1986) J. Biol. Chem. 261, 12936-12941) strongly suggest that, in rat liver, the bulk of O-glycosylation reactions occur in the Golgi apparatus.


Asunto(s)
Acetilgalactosamina/biosíntesis , Galactosamina/análogos & derivados , Galactosiltransferasas/metabolismo , Hígado/ultraestructura , N-Acetilgalactosaminiltransferasas , Serina/metabolismo , Treonina/metabolismo , Animales , Radioisótopos de Carbono , Retículo Endoplásmico/enzimología , Aparato de Golgi/enzimología , Membranas Intracelulares/enzimología , Ratas , Tritio , Uridina Difosfato N-Acetilgalactosamina/metabolismo , Polipéptido N-Acetilgalactosaminiltransferasa
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