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1.
Sci Rep ; 14(1): 16546, 2024 Jul 17.
Artículo en Inglés | MEDLINE | ID: mdl-39019951

RESUMEN

Intercropping systems have garnered attention as a sustainable agricultural approach for efficient land use, increased ecological diversity in farmland, and enhanced crop yields. This study examined the effect of intercropping on the kiwifruit rhizosphere to gain a deeper understanding of the relationships between cover plants and kiwifruit in this sustainable agricultural system. Soil physicochemical properties and bacterial communities were analyzed using the Kiwifruit-Agaricus blazei intercropping System. Moreover, a combined analysis of 16S rRNA gene sequencing and metabolomic sequencing was used to identify differential microbes and metabolites in the rhizosphere. Intercropping led to an increase in soil physicochemical and enzyme activity, as well as re-shaping the bacterial community and increasing microbial diversity. Proteobacteria, Bacteroidota, Myxococcota, and Patescibacteria were the most abundant and diverse phyla in the intercropping system. Expression analysis further revealed that the bacterial genera BIrii41, Acidibacter, and Altererythrobacter were significantly upregulated in the intercropping system. Moreover, 358 differential metabolites (DMs) were identified between the monocropping and intercropping cultivation patterns, with fatty acyls, carboxylic acids and derivatives, and organooxygen compounds being significantly upregulated in the intercropping system. The KEGG metabolic pathways further revealed considerable enrichment of DMs in ABC transporters, histidine metabolism, and pyrimidine metabolism. This study identified a significant correlation between 95 bacterial genera and 79 soil metabolites, and an interactive network was constructed to explore the relationships between these differential microbes and metabolites in the rhizosphere. This study demonstrated that Kiwifruit-Agaricus blazei intercropping can be an effective, labor-saving, economic, and sustainable practice for reshaping bacterial communities and promoting the accumulation and metabolism of beneficial microorganisms in the rhizosphere.


Asunto(s)
Actinidia , Agaricus , Bacterias , Rizosfera , Microbiología del Suelo , Actinidia/microbiología , Actinidia/crecimiento & desarrollo , Agaricus/crecimiento & desarrollo , Agaricus/metabolismo , Agaricus/genética , Bacterias/genética , Bacterias/metabolismo , Bacterias/clasificación , Bacterias/crecimiento & desarrollo , ARN Ribosómico 16S/genética , Agricultura/métodos , Suelo/química , Microbiota , Nutrientes/metabolismo , Producción de Cultivos/métodos
2.
Int J Mol Sci ; 25(11)2024 May 22.
Artículo en Inglés | MEDLINE | ID: mdl-38891815

RESUMEN

The growing trend in fruit wine production reflects consumers' interest in novel, diverse drinking experiences and the increasing demand for healthier beverage options. Fruit wines made from kiwi, pomegranates, and persimmons fermented using S. bayanus Lalvin strain EC1118 demonstrate the versatility of winemaking techniques. Kiwifruit, persimmon, and pomegranate wines were analyzed using HPLC and GC-TOFMS analyses to determine their concentrations of phenolic acids and volatile compounds. These results were supported by Fourier transform infrared (FTIR) spectroscopy to characterize and compare chemical shifts in the polyphenol regions of these wines. The wines' characterization included an anti-inflammatory assay based on NO, TNF-alpha, and IL-6 production in the RAW 264.7 macrophage model. FTIR spectroscopy predicted the antioxidant and phenolic contents in the wines. In terms of polyphenols, predominantly represented by chlorogenic, caffeic, and gallic acids, pomegranate and kiwifruit wines showed greater benefits. However, kiwifruit wines exhibited a highly diverse profile of volatile compounds. Further analysis is necessary, particularly regarding the use of other microorganisms in the fermentation process and non-Saccharomyces strains methods. These wines exhibit high biological antioxidant potential and health properties, providing valuable insights for future endeavors focused on designing healthy functional food products.


Asunto(s)
Antiinflamatorios , Fermentación , Frutas , Saccharomyces cerevisiae , Compuestos Orgánicos Volátiles , Vino , Vino/análisis , Compuestos Orgánicos Volátiles/análisis , Compuestos Orgánicos Volátiles/metabolismo , Ratones , Saccharomyces cerevisiae/metabolismo , Antiinflamatorios/farmacología , Antiinflamatorios/análisis , Antiinflamatorios/química , Frutas/química , Frutas/metabolismo , Animales , Células RAW 264.7 , Espectroscopía Infrarroja por Transformada de Fourier/métodos , Polifenoles/análisis , Antioxidantes/análisis , Actinidia/química , Granada (Fruta)/química
3.
Sci Rep ; 14(1): 13799, 2024 06 14.
Artículo en Inglés | MEDLINE | ID: mdl-38877048

RESUMEN

Cardiovascular diseases (CVDs), mainly caused by thrombosis complications, are the leading cause of mortality worldwide, making the development of alternative treatments highly desirable. In this study, the thrombolytic potential of green kiwifruit (Actinidia deliciosa cultivar Hayward) was assessed using in-vitro and in-silico approaches. The crude green kiwifruit extract demonstrated the ability to reduce blood clots significantly by 73.0 ± 1.12% (P < 0.01) within 6 h, with rapid degradation of Aα and Bß fibrin chains followed by the γ chain in fibrinolytic assays. Molecular docking revealed six favorable conformations for the kiwifruit enzyme actinidin (ADHact) and fibrin chains, supported by spontaneous binding energies and distances. Moreover, molecular dynamics simulation confirmed the binding stability of the complexes of these conformations, as indicated by the stable binding affinity, high number of hydrogen bonds, and consistent distances between the catalytic residue Cys25 of ADHact and the peptide bond. The better overall binding affinity of ADHact to fibrin chains Aα and Bß may contribute to their faster degradation, supporting the fibrinolytic results. In conclusion, this study demonstrated the thrombolytic potential of the green kiwifruit-derived enzyme and highlighted its potential role as a natural plant-based prophylactic and therapeutic agent for CVDs.


Asunto(s)
Actinidia , Fibrinolíticos , Simulación del Acoplamiento Molecular , Simulación de Dinámica Molecular , Actinidia/química , Fibrinolíticos/química , Fibrinolíticos/farmacología , Extractos Vegetales/química , Extractos Vegetales/farmacología , Frutas/química , Fibrina/metabolismo , Fibrina/química , Animales , Humanos , Simulación por Computador , Cisteína Endopeptidasas/química , Cisteína Endopeptidasas/metabolismo
4.
Tissue Cell ; 88: 102426, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38833941

RESUMEN

Diabetes mellitus (DM) is a well-known hyperglycemic metabolic condition identified by oxidative stress and biological function disruption. Kiwifruit is a valuable source of polyphenols and vitamin C with great antioxidant, nutritional, and health-promoting effects. Therefore, this study was initiated to explore the antioxidant and anti-hyperglycemic effects of kiwifruit aqueous extract (KFE) against oxidative injury and testis dysfunction in rats with diabetes. Twenty-four male Wistar Albino rats (160-170 g) were divided into four groups: Group 1 served as the control, Group 2 supplemented orally with kiwifruit extract (KFE; 1 g/kg/day) for one month, Group 3 was treated with a single streptozotocin dose (STZ; 50 mg/kg ip), and Group 4 where the diabetic rats were administered with KFE, respectively. According to the results, the GC-MS analysis of KFE revealed several main components with strong antioxidant properties. In diabetic rats, lipid peroxidation and hyperglycemia were accompanied by perturbations in hormone levels and sperm characteristics. Antioxidant enzymes, glutathione content, aminotransferase, phosphatase activities, and protein content were decreased. Furthermore, histology, immunohistochemical PCNA expression, and histochemical analysis of collagen, DNA, RNA, and total protein. were altered in rat testis sections, supporting the changes in biochemistry. Furthermore, diabetic rats supplemented with KFE manifested considerable amendment in all the tested parameters besides improved tissue structure and gene expressions (NF-kB, p53, IL-1ß, Bax, IL-10, and Bcl2) relative to the diabetic group. In conclusion, KFE has beneficial effects as it can improve glucose levels and testis function, so it might be used as a complementary therapy in DM.


Asunto(s)
Actinidia , Apoptosis , Diabetes Mellitus Experimental , Hiperglucemia , Inflamación , Estrés Oxidativo , Extractos Vegetales , Ratas Wistar , Testículo , Animales , Masculino , Actinidia/química , Estrés Oxidativo/efectos de los fármacos , Extractos Vegetales/farmacología , Extractos Vegetales/química , Ratas , Testículo/efectos de los fármacos , Testículo/metabolismo , Testículo/patología , Diabetes Mellitus Experimental/tratamiento farmacológico , Diabetes Mellitus Experimental/patología , Diabetes Mellitus Experimental/metabolismo , Apoptosis/efectos de los fármacos , Hiperglucemia/tratamiento farmacológico , Hiperglucemia/metabolismo , Hiperglucemia/patología , Inflamación/tratamiento farmacológico , Inflamación/patología , Estreptozocina , Antioxidantes/farmacología
5.
Int J Mol Sci ; 25(11)2024 May 26.
Artículo en Inglés | MEDLINE | ID: mdl-38891986

RESUMEN

Food allergies mediated by specific IgE (sIgE) have a significant socioeconomic impact on society. Evaluating the IgE cross-reactivity between allergens from different allergen sources can enable the better management of these potentially life-threatening adverse reactions to food proteins and enhance food safety. A novel banana fruit allergen, S-adenosyl-L-homocysteine hydrolase (SAHH), has been recently identified and its recombinant homolog was heterologously overproduced in E. coli. In this study, we performed a search in the NCBI (National Center for Biotechnology Information) for SAHH homologs in ryegrass, latex, and kiwifruit, all of which are commonly associated with pollen-latex-fruit syndrome. In addition, Western immunoblot analysis was utilized to identify the cross-reactive IgE to banana SAHH in the sera of patients with a latex allergy, kiwifruit allergy, and ryegrass allergy. ClustalOmega analysis showed more than 92% amino acid sequence identity among the banana SAHH homologs in ryegrass, latex, and kiwifruit. In addition to five B-cell epitopes, in silico analysis predicted eleven T-cell epitopes in banana SAHH, seventeen in kiwifruit SAHH, twelve in ryegrass SAHH, and eight in latex SAHH, which were related to the seven-allele HLA reference set (HLA-DRB1*03:01, HLA-DRB1*07:01, HLA-DRB1*15:01, HLA-DRB3*01:01, HLA-DRB3*02:02, HLA-DRB4*01:01, HLA-DRB5*01:01). Four T-cell epitopes were identical in banana and kiwifruit SAHH (positions 328, 278, 142, 341), as well as banana and ryegrass SAHH (positions 278, 142, 96, and 341). All four SAHHs shared two T-cell epitopes (positions 278 and 341). In line with the high amino acid sequence identity and B-cell epitope homology among the analyzed proteins, the cross-reactive IgE to banana SAHH was detected in three of three latex-allergic patients, five of six ryegrass-allergic patients, and two of three kiwifruit-allergic patients. Although banana SAHH has only been studied in a small group of allergic individuals, it is a novel cross-reactive food allergen that should be considered when testing for pollen-latex-fruit syndrome.


Asunto(s)
Actinidia , Alérgenos , Reacciones Cruzadas , Hipersensibilidad a los Alimentos , Inmunoglobulina E , Látex , Musa , Humanos , Reacciones Cruzadas/inmunología , Hipersensibilidad a los Alimentos/inmunología , Alérgenos/inmunología , Alérgenos/genética , Musa/inmunología , Musa/genética , Inmunoglobulina E/inmunología , Actinidia/inmunología , Femenino , Látex/inmunología , Masculino , Proteínas de Plantas/inmunología , Proteínas de Plantas/genética , Adulto , Antígenos de Plantas/inmunología , Antígenos de Plantas/genética , Secuencia de Aminoácidos , Epítopos de Linfocito T/inmunología , Persona de Mediana Edad , Adolescente , Niño , Adulto Joven
6.
Int J Biol Macromol ; 273(Pt 2): 133116, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38889832

RESUMEN

A biochar (KBC) enriched with O functional groups was prepared by torrefaction using lignin-rich kiwifruit branches (KBM) as a raw material, which was characterized, and then KBC was used to adsorb hexavalent chromium (Cr6+) from water. The results showed that KBC contained more functional groups compared to KBM. The maximum adsorption of Cr6+ by KBC could reach 143.64 mg·g-1 and also had better adsorption performance than other adsorbents reported in some other reports. Cr6+ absorption by KBC was mainly a mechanism of electrostatic interaction and adsorption-reduction coupling. FTIR and XPS revealed that -OH, -COOH, CO and CC on KBC participated in Cr6+ adsorption and new groups (C=O) were generated during the process of adsorption, which implied that a redox reaction occurred. 2D-COS and DFT calculations showed that the order of functional groups on KBC interacting with Cr6+ was -OCH3 > -COOH > -OH > phenolic hydroxyl, and the binding tightness of the different functional groups to Cr6+ was -OCH3 (the shortest displacement of both groups after the adsorption) > -COOH > -OH > phenolic hydroxyl. KBC has good regeneration performance, and it is a good adsorbent for Cr6+.


Asunto(s)
Actinidia , Carbón Orgánico , Cromo , Lignina , Contaminantes Químicos del Agua , Agua , Cromo/química , Cromo/aislamiento & purificación , Carbón Orgánico/química , Adsorción , Lignina/química , Contaminantes Químicos del Agua/química , Contaminantes Químicos del Agua/aislamiento & purificación , Agua/química , Actinidia/química , Teoría Funcional de la Densidad , Purificación del Agua/métodos , Espectroscopía Infrarroja por Transformada de Fourier
8.
Plant J ; 119(2): 1059-1072, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38761127

RESUMEN

Most of kiwifruit cultivars (e.g. Actinidia chinensis cv. Donghong, "DH") were sensitive to waterlogging, thus, waterlogging resistant rootstocks (e.g. Actinidia valvata Dunn, "Dunn") were widely used for kiwifruit industry. Those different species provided ideal materials to understand the waterlogging responses in kiwifruit. Compared to the weaken growth and root activities in "DH", "Dunn" maintained the relative high root activities under the prolonged waterlogging. Based on comparative analysis, transcript levels of pyruvate decarboxylase (PDCs) and alcohol dehydrogenase (ADHs) showed significantly difference between these two species. Both PDCs and ADHs had been significantly increased by waterlogging in "DH", while they were only limitedly triggered by 2 days stress and subsided during the prolonged waterlogging in "Dunn". Thus, 19 differentially expressed transcript factors (DETFs) had been isolated using weighted gene co-expression network analysis combined with transcriptomics and transcript levels of PDCs and ADHs in waterlogged "DH". Among these DETFs, dual luciferase and electrophoretic mobility shift assays indicated AcMYB68 could bind to and trigger the activity of AcPDC2 promoter. The stable over-expression of AcMYB68 significantly up-regulated the transcript levels of PDCs but inhibited the plant growth, especially the roots. Moreover, the enzyme activities of PDC in 35S::AcMYB68 were significantly enhanced during the waterlogging response than that in wild type plants. Most interestingly, comparative analysis indicated that the expression patterns of AcMYB68 and the previously characterized AcERF74/75 (the direct regulator on ADHs) either showed no responses (AcMYB68 and AcERF74) or very limited response (AcERF75) in "Dunn". Taken together, the restricted responses of AcMYB68 and AcERF74/75 in "Dunn" endow its waterlogging tolerance.


Asunto(s)
Actinidia , Regulación de la Expresión Génica de las Plantas , Proteínas de Plantas , Piruvato Descarboxilasa , Actinidia/genética , Actinidia/fisiología , Actinidia/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Piruvato Descarboxilasa/genética , Piruvato Descarboxilasa/metabolismo , Alcohol Deshidrogenasa/genética , Alcohol Deshidrogenasa/metabolismo , Raíces de Plantas/genética , Raíces de Plantas/fisiología , Agua/metabolismo , Factores de Transcripción/genética , Factores de Transcripción/metabolismo , Estrés Fisiológico , Regiones Promotoras Genéticas/genética
9.
Hereditas ; 161(1): 18, 2024 May 17.
Artículo en Inglés | MEDLINE | ID: mdl-38760874

RESUMEN

BACKGROUND: Kiwifruit (Actinidiaceae family) is an economically important fruit tree in China and New Zealand. It is a typical dioecious plant that has undergone frequent natural hybridization, along with chromosomal ploidy diversity within the genus Actinidia, resulting in higher genetic differences and horticultural diversity between interspecific and intraspecific traits. This diversity provides a rich genetic base for breeding. China is not only the original center of speciation for the Actinidia genus but also its distribution center, housing the most domesticated species: A. chinensis var. chinensis, A. chinensis var. deliciosa, A. arguta, and A. polygama. However, there have been relatively few studies on the application of DNA markers and the genetic basis of kiwifruit plants. By combining information from chloroplast-specific SNPs and nuclear SCoT (nSCoT) markers, we can uncover complementary aspects of genetic variation, population structure, and evolutionary relationships. In this study, one chloroplast DNA (cpDNA) marker pair was selected out of nine cpDNA candidate pairs. Twenty nSCoT markers were selected and used to assess the population structure and chloroplast-specific DNA haplotype diversity in 55 kiwifruit plants (Actinidia), including 20 samples of A. chinensis var. chinensis, 22 samples of A. chinensis var. deliciosa, 11 samples of A. arguta, and two samples of A. polygama, based on morphological observations collected from China. RESULTS: The average genetic distance among the 55 samples was 0.26 with chloroplast-specific SNP markers and 0.57 with nSCoT markers. The Mantel test revealed a very small correlation (r = 0.21). The 55 samples were categorized into different sub-populations using Bayesian analysis, the Unweighted Pair Group Method with the Arithmetic Mean (UPGMA), and the Principal Component Analysis (PCA) method, respectively. Based on the analysis of 205 variable sites, a total of 15 chloroplast-specific DNA haplotypes were observed, contributing to a higher level of polymorphism with an Hd of 0.78. Most of the chloroplast-specific DNA haplotype diversity was distributed among populations, but significant diversity was also observed within populations. H1 was shared by 24 samples, including 12 of A. chinensis var. chinensis and 12 of A. chinensis var. deliciosa, indicating that H1 is an ancient and dominant haplotype among the 55 chloroplast-specific sequences. H2 may not have evolved further.The remaining haplotypes were rare and unique, with some appearing to be exclusive to a particular variety and often detected in single individuals. For example, the H15 haplotype was found exclusively in A. polygama. CONCLUSION: The population genetic variation explained by chloroplast-specific SNP markers has greater power than that explained by nSCoTs, with chloroplast-specific DNA haplotypes being the most efficient. Gene flow appears to be more evident between A. chinensis var. chinensis and A. chinensis var. deliciosa, as they share chloroplast-specific DNA haplotypes, In contrast, A.arguta and A. polygama possess their own characteristic haplotypes, derived from the haplotype of A. chinensis var. chinensis. Compared with A. chinensis, the A.arguta and A. polygama showed better grouping. It also seems crucial to screen out, for each type of molecular marker, especially haplotypes, the core markers of the Actinidia genus.


Asunto(s)
Actinidia , Cloroplastos , ADN de Cloroplastos , Haplotipos , Filogenia , Polimorfismo de Nucleótido Simple , Actinidia/genética , ADN de Cloroplastos/genética , Marcadores Genéticos , Cloroplastos/genética , China , Genética de Población , Variación Genética
10.
Biosensors (Basel) ; 14(5)2024 May 03.
Artículo en Inglés | MEDLINE | ID: mdl-38785700

RESUMEN

This manuscript reports the application of sensors for water use efficiency with a focus on the application of an in vivo OECT biosensor. In two distinct experimental trials, the in vivo sensor bioristor was applied in yellow kiwi plants to monitor, in real-time and continuously, the changes in the composition and concentration of the plant sap in an open field during plant growth and development. The bioristor response and physiological data, together with other fruit sensor monitoring data, were acquired and combined in both trials, giving a complete picture of the biosphere conditions. A high correlation was observed between the bioristor index (ΔIgs), the canopy cover expressed as the fraction of intercepted PAR (fi_PAR), and the soil water content (SWC). In addition, the bioristor was confirmed to be a good proxy for the occurrence of drought in kiwi plants; in fact, a period of drought stress was identified within the month of July. A novelty of the bioristor measurements was their ability to detect in advance the occurrence of defoliation, thereby reducing yield and quality losses. A plant-based irrigation protocol can be achieved and tailored based on real plant needs, increasing water use sustainability and preserving high-quality standards.


Asunto(s)
Actinidia , Técnicas Biosensibles , Agua , Suelo , Frutas , Sequías
11.
Food Chem ; 451: 139497, 2024 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-38692240

RESUMEN

The objective of this study was to evaluate the impacts of different drying technologies including microwave drying (MD), vacuum microwave drying (VMD), sun drying (SD), vacuum drying (VD), hot air drying (HAD), and vacuum freeze drying (VFD) on the physical characteristics, nutritional properties and antioxidant capacities of kiwifruit pomace in order to realize by-product utilization and improve energy efficiency. Results showed that both MD and VMD significantly reduced drying time by >94.6%, compared to traditional thermal drying which took 14-48 h. MD exhibited the highest content of soluble dietary fiber (9.5%) and the lowest energy consumption. Furthermore, VMD resulted in the highest content of vitamin C (198.78 mg/100 g) and reducing sugar (73.78%), and the antioxidant capacities ranked only second to VFD. Given the financial advantages and product quality, VMD was suggested to be advantageous technology in actual industrial production.


Asunto(s)
Actinidia , Antioxidantes , Desecación , Frutas , Valor Nutritivo , Antioxidantes/química , Antioxidantes/análisis , Actinidia/química , Frutas/química , Desecación/métodos , Desecación/instrumentación , Liofilización , Manipulación de Alimentos/instrumentación , Manipulación de Alimentos/métodos , Vacio , Fibras de la Dieta/análisis
12.
BMC Genomics ; 25(1): 461, 2024 May 11.
Artículo en Inglés | MEDLINE | ID: mdl-38734623

RESUMEN

BACKGROUND: Pseudomonas syringae pv. actinidiae (Psa) is an important bacterial plant pathogen that causes severe damage to the kiwifruit industry worldwide. Three Psa strains were recently obtained from different kiwifruit orchards in Anhui Province, China. The present study mainly focused on the variations in virulence and genome characteristics of these strains based on the pathogenicity assays and comparative genomic analyses. RESULTS: Three strains were identified as biovar 3 (Psa3), along with strain QSY6 showing higher virulence than JZY2 and YXH1 in pathogenicity assays. The whole genome assembly revealed that each of the three strains had a circular chromosome and a complete plasmid. The chromosome sizes ranged from 6.5 to 6.6 Mb with a GC content of approximately 58.39 to 58.46%, and a predicted number of protein-coding sequences ranging from 5,884 to 6,019. The three strains clustered tightly with 8 Psa3 reference strains in terms of average nucleotide identity (ANI), whole-genome-based phylogenetic analysis, and pangenome analysis, while they were evolutionarily distinct from other biovars (Psa1 and Psa5). Variations were observed in the repertoire of effectors of the type III secretion system among all 15 strains. Moreover, synteny analysis of the three sequenced strains revealed eight genomic regions containing 308 genes exclusively present in the highly virulent strain QSY6. Further investigation of these genes showed that 16 virulence-related genes highlight several key factors, such as effector delivery systems (type III secretion systems) and adherence (type IV pilus), which might be crucial for the virulence of QSY6. CONCLUSION: Three Psa strains were identified and showed variant virulence in kiwifruit plant. Complete genome sequences and comparative genomic analyses further provided a theoretical basis for the potential pathogenic factors responsible for kiwifruit bacterial canker.


Asunto(s)
Actinidia , Genoma Bacteriano , Genómica , Filogenia , Enfermedades de las Plantas , Pseudomonas syringae , Pseudomonas syringae/genética , Pseudomonas syringae/patogenicidad , China , Actinidia/microbiología , Virulencia/genética , Enfermedades de las Plantas/microbiología
13.
Sci Rep ; 14(1): 10664, 2024 05 09.
Artículo en Inglés | MEDLINE | ID: mdl-38724603

RESUMEN

Kiwifruit soft rot is highly contagious and causes serious economic loss. Therefore, early detection and elimination of soft rot are important for postharvest treatment and storage of kiwifruit. This study aims to accurately detect kiwifruit soft rot based on hyperspectral images by using a deep learning approach for image classification. A dual-branch selective attention capsule network (DBSACaps) was proposed to improve the classification accuracy. The network uses two branches to separately extract the spectral and spatial features so as to reduce their mutual interference, followed by fusion of the two features through the attention mechanism. Capsule network was used instead of convolutional neural networks to extract the features and complete the classification. Compared with existing methods, the proposed method exhibited the best classification performance on the kiwifruit soft rot dataset, with an overall accuracy of 97.08% and a 97.83% accuracy for soft rot. Our results confirm that potential soft rot of kiwifruit can be detected using hyperspectral images, which may contribute to the construction of smart agriculture.


Asunto(s)
Actinidia , Redes Neurales de la Computación , Enfermedades de las Plantas , Actinidia/microbiología , Enfermedades de las Plantas/microbiología , Aprendizaje Profundo , Imágenes Hiperespectrales/métodos , Frutas/microbiología , Procesamiento de Imagen Asistido por Computador/métodos
14.
Sci Total Environ ; 932: 173109, 2024 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-38729361

RESUMEN

The influence of endophytic microbial community on plant growth and disease resistance is of considerable importance. Prior research indicates that pre-treatment of kiwifruit with the biocontrol yeast Debaryomyces hansenii suppresses gray mold disease induced by Botrytis cinerea. However, the specific underlying mechanisms remain unclear. In this study, Metagenomic sequencing was utilized to analyze the composition of the endophytic microbiome of kiwifruit under three distinct conditions: the healthy state, kiwifruit inoculated with B. cinerea, and kiwifruit treated with D. hansenii prior to inoculation with B. cinerea. Results revealed a dominance of Proteobacteria in all treatment groups, accompanied by a notable increase in the relative abundance of Actinobacteria and Firmicutes. Ascomycota emerged as the major dominant group within the fungal community. Treatment with D. hansenii induced significant alterations in microbial community diversity, specifically enhancing the relative abundance of yeast and exerting an inhibitory effect on B. cinerea. The introduction of D. hansenii also enriched genes associated with energy metabolism and signal transduction, positively influencing the overall structure and function of the microbial community. Our findings highlight the potential of D. hansenii to modulate microbial dynamics, inhibit pathogenic organisms, and positively influence functional attributes of the microbial community.


Asunto(s)
Actinidia , Botrytis , Endófitos , Microbiota , Enfermedades de las Plantas , Endófitos/fisiología , Botrytis/fisiología , Actinidia/microbiología , Enfermedades de las Plantas/microbiología , Enfermedades de las Plantas/prevención & control , Frutas/microbiología , Resistencia a la Enfermedad , Debaryomyces/fisiología , Ascomicetos/fisiología
15.
Eur J Med Res ; 29(1): 291, 2024 May 19.
Artículo en Inglés | MEDLINE | ID: mdl-38764054

RESUMEN

BACKGROUND: Renal cell carcinoma (RCC) is a malignant tumor. Radix Actinidiae chinensis (RAC) is the root of Actinidia arguta (Sieb. et Zucc) Planch. ex Miq. In clinical research, RAC was confirmed to have a certain anti-tumor effect, including liver cancer and cholangiocarcinoma. This study investigated the anticancer effect and mechanism of RAC in RCC cells. METHODS: The 786-O and A498 cells were intervened with varying concentrations of RAC (0-100 mg/mL) to detect the half maximal inhibitory concentration (IC50) of RAC. The cells were then co-cultured with 0-50 mg/mL RAC for 0-72 h to assess the effect of RAC on cell viability using the cell counting kit-8. The effects on cell proliferation, cell cycle or apoptosis, migration or invasion, and autophagy were detected using cloning, flow cytometry, Transwell, AOPI assay and Western blot. The number of autophagolysosomes was quantified using a transmission electron microscope. PI3K/AKT/mTOR pathway-related proteins were detected by Western blot. Additionally, an autophagy inhibitor 3-MA was used to explore the underlying mechanism of RAC. RESULTS: IC50 values of RAC in 786-O and A498 were 14.76 mg/mL and 13.09 mg/mL, respectively. RAC demonstrated the ability to reduce the cell malignant phenotype of RCC cells, blocked the S phase of cells, promoted apoptosis and autophagy in cells. Furthermore, RAC was observed to increase autophagy-related proteins LC3II/I and Beclin-1, while decreasing the level of P62. The expression of apoptosis-related proteins was increased, while the ratios of p-PI3K/PI3K, p-AKT/AKT, p-mTOR/mTOR, p-P38/P38 and p-ERK/ERK were reduced by RAC. However, the addition of 3-MA reduced the apoptosis and autophagy- promotion effects of RAC on RCC cells. CONCLUSION: RAC induced the apoptosis and autophagy, to inhibit the progression of RCC cells. This study may provide a theoretical and experimental basis for clinical anti-cancer application of RAC for RCC.


Asunto(s)
Apoptosis , Autofagia , Carcinoma de Células Renales , Proliferación Celular , Neoplasias Renales , Humanos , Carcinoma de Células Renales/tratamiento farmacológico , Carcinoma de Células Renales/patología , Carcinoma de Células Renales/metabolismo , Autofagia/efectos de los fármacos , Apoptosis/efectos de los fármacos , Neoplasias Renales/tratamiento farmacológico , Neoplasias Renales/patología , Neoplasias Renales/metabolismo , Proliferación Celular/efectos de los fármacos , Actinidia/química , Línea Celular Tumoral , Movimiento Celular/efectos de los fármacos , Serina-Treonina Quinasas TOR/metabolismo , Transducción de Señal/efectos de los fármacos , Proteínas Proto-Oncogénicas c-akt/metabolismo , Fosfatidilinositol 3-Quinasas/metabolismo , Supervivencia Celular/efectos de los fármacos
16.
Medicine (Baltimore) ; 103(15): e37829, 2024 Apr 12.
Artículo en Inglés | MEDLINE | ID: mdl-38608062

RESUMEN

In this paper, our objective was to investigate the potential mechanisms of Actinidia chinensis Planch (ACP) for breast cancer treatment with the application of network pharmacology, molecular docking, and molecular dynamics. "Mihoutaogen" was used as a key word to query the Traditional Chinese Medicine Systems Pharmacology database for putative ingredients of ACP and its related targets. DrugBank, GeneCards, Online Mendelian Inheritance in Man, and therapeutic target databases were used to search for genes associated with "breast cancer." Using Cytoscape 3.9.0 we then constructed the protein-protein interaction and drug-ingredient-target-disease networks. An enrichment analysis of Kyoto encyclopedia of genes and genomes pathway and gene ontology were performed to exploration of the signaling pathways associated with ACP for breast cancer treatment. Discovery Studio software was applied to molecular docking. Finally, the ligand-receptor complex was subjected to a 50-ns molecular dynamics simulation using the Desmond_2020.4 tools. Six main active ingredients and 176 targets of ACP and 2243 targets of breast cancer were screened. There were 118 intersections of targets for both active ingredients and diseases. Tumor protein P53 (TP53), AKT serine/threonine kinase 1 (AKT1), estrogen receptor 1 (ESR1), Erb-B2 receptor tyrosine kinase 2 (ERBB2), epidermal growth factor receptor (EGFR), Jun Proto-Oncogene (JUN), and Heat Shock Protein 90 Alpha Family Class A Member 1 (HSP90AA1) selected as the most important genes were used for verification by molecular docking and molecular dynamics simulation. The primary active compounds of ACP against breast cancer were predicted preliminarily, and its mechanism was studied, thereby providing a theoretical basis for future clinical studies.


Asunto(s)
Actinidia , Neoplasias de la Mama , Humanos , Femenino , Farmacología en Red , Neoplasias de la Mama/tratamiento farmacológico , Simulación del Acoplamiento Molecular , Bases de Datos Genéticas
17.
Plant J ; 119(1): 100-114, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38600835

RESUMEN

As global climate change persists, ongoing warming exposes plants, including kiwifruit, to repeated cycles of drought stress and rewatering, necessitating the identification of drought-resistant genotypes for breeding purposes. To better understand the physiological mechanisms underlying drought resistance and recovery in kiwifruit, moderate (40-45% field capacity) and severe (25-30% field capacity) drought stresses were applied, followed by rewatering (80-85% field capacity) to eight kiwifruit rootstocks in this study. We then conducted a multivariate analysis of 20 indices for the assessment of drought resistance and recovery capabilities. Additionally, we identified four principal components, each playing a vital role in coping with diverse water conditions. Three optimal indicator groups were pinpointed, enhancing precision in kiwifruit drought resistance and recovery assessment and simplifying the evaluation system. Finally, MX-1 and HW were identified as representative rootstocks for future research on kiwifruit's responses to moderate and severe drought stresses. This study not only enhances our understanding of the response mechanisms of kiwifruit rootstocks to progressive drought stress and recovery but also provides theoretical guidance for reliable screening of drought-adaptive kiwifruit genotypes.


Asunto(s)
Actinidia , Sequías , Genotipo , Actinidia/genética , Actinidia/fisiología , Análisis Multivariante , Estrés Fisiológico/genética , Raíces de Plantas/fisiología , Raíces de Plantas/genética , Agua/metabolismo , Frutas/genética , Frutas/fisiología , Resistencia a la Sequía
18.
J Sci Food Agric ; 104(11): 6821-6830, 2024 Aug 30.
Artículo en Inglés | MEDLINE | ID: mdl-38572801

RESUMEN

BACKGROUND: Currently, organic farming has become a feasible approach for the production of high-quality fruits. To evaluate the response of fruit quality and mineral nutrition contents of Hayward Kiwifruit affected by different organic and inorganic fertilizers, the present study was conducted in Citrus and Subtropical Fruits Research Center, Iran, in 2017-2021, as a randomized block design with three replications. The studied treatments were organic fertilizers (cow, vermicompost and Azolla) and chemical fertilizers. After 4 years of fertilization, the fruit's nutritional elements content and some fruit bioactive compounds were evaluated after 3 months of cold storage and then analyzed by the principal component analysis (PCA) method. RESULTS: The use of organic amendments boosted the calcium, phosphorus, potassium and iron content of the kiwifruits compared to chemical fertilizers. The highest fruit potassium and phosphorus content were recorded in the cow manure treatment. The lowest amount of nitrate and the highest calcium, zinc, copper and manganese accumulation were recorded in the fruits treated with vermicompost. In addition to mineral nutrients, the dry matter, total soluble solids, total phenolic and antioxidant capacity of kiwifruit were improved by the application of vermicompost amendment compared to the other fertilizer sources. However, the highest fruit vitamin C and total soluble carbohydrates were measured in the cow manure treatment. The PCA results of the fruit quality indices indicated that fertilization treatments were ranked as vermicompost (1.88) > cow manure (1.63) = chemical (1.60) > Azolla (1.54). CONCLUSION: It is concluded that the application of 40 kg of vermicompost or 40 kg of cow manure in the next rank in Hayward kiwifruit orchards in March (growth stage beginning of bud swelling) may be a more suitable approach for improving the nutritional quality of the fruit. © 2024 Society of Chemical Industry.


Asunto(s)
Actinidia , Fertilizantes , Frutas , Valor Nutritivo , Fertilizantes/análisis , Actinidia/química , Actinidia/crecimiento & desarrollo , Frutas/química , Frutas/crecimiento & desarrollo , Frutas/metabolismo , Irán , Fósforo/análisis , Agricultura Orgánica/métodos , Bovinos , Animales , Estiércol/análisis , Potasio/análisis , Potasio/metabolismo
19.
BMC Genomics ; 25(1): 354, 2024 Apr 09.
Artículo en Inglés | MEDLINE | ID: mdl-38594645

RESUMEN

The homeodomain-leucine zipper (HD-Zip) gene family plays a pivotal role in plant development and stress responses. Nevertheless, a comprehensive characterization of the HD-Zip gene family in kiwifruit has been lacking. In this study, we have systematically identified 70 HD-Zip genes in the Actinidia chinensis (Ac) genome and 55 in the Actinidia eriantha (Ae) genome. These genes have been categorized into four subfamilies (HD-Zip I, II, III, and IV) through rigorous phylogenetic analysis. Analysis of synteny patterns and selection pressures has provided insights into how whole-genome duplication (WGD) or segmental may have contributed to the divergence in gene numbers between these two kiwifruit species, with duplicated gene pairs undergoing purifying selection. Furthermore, our study has unveiled tissue-specific expression patterns among kiwifruit HD-Zip genes, with some genes identified as key regulators of kiwifruit responses to bacterial canker disease and postharvest processes. These findings not only offer valuable insights into the evolutionary and functional characteristics of kiwifruit HD-Zips but also shed light on their potential roles in plant growth and development.


Asunto(s)
Actinidia , Proteínas de Homeodominio , Proteínas de Homeodominio/genética , Genoma de Planta , Filogenia , Actinidia/genética , Leucina Zippers/genética , Regulación de la Expresión Génica de las Plantas , Proteínas de Plantas/genética , Perfilación de la Expresión Génica
20.
Plant Signal Behav ; 19(1): 2338985, 2024 Dec 31.
Artículo en Inglés | MEDLINE | ID: mdl-38597293

RESUMEN

The TEOSINTE-BRANCHED1/CYCLOIDEA/PROLEFERATING-CELL-FACTORS (TCP) gene family is a plant-specific transcriptional factor family involved in leaf morphogenesis and senescence, lateral branching, hormone crosstalk, and stress responses. To date, a systematic study on the identification and characterization of the TCP gene family in kiwifruit has not been reported. Additionally, the function of kiwifruit TCPs in regulating kiwifruit responses to the ethylene treatment and bacterial canker disease pathogen (Pseudomonas syringae pv. actinidiae, Psa) has not been investigated. Here, we identified 40 and 26 TCP genes in Actinidia chinensis (Ac) and A. eriantha (Ae) genomes, respectively. The synteny analysis of AcTCPs illustrated that whole-genome duplication accounted for the expansion of the TCP family in Ac. Phylogenetic, conserved domain, and selection pressure analysis indicated that TCP family genes in Ac and Ae had undergone different evolutionary patterns after whole-genome duplication (WGD) events, causing differences in TCP gene number and distribution. Our results also suggested that protein structure and cis-element architecture in promoter regions of TCP genes have driven the function divergence of duplicated gene pairs. Three and four AcTCP genes significantly affected kiwifruit responses to the ethylene treatment and Psa invasion, respectively. Our results provided insight into general characters, evolutionary patterns, and functional diversity of kiwifruit TCPs.


Asunto(s)
Actinidia , Filogenia , Actinidia/genética , Factores de Transcripción/genética , Etilenos , Pseudomonas syringae/fisiología , Enfermedades de las Plantas/microbiología
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