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1.
Nature ; 622(7983): 545-551, 2023 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-37758946

RESUMEN

Trilobites are among the most iconic of fossils and formed a prominent component of marine ecosystems during most of their 270-million-year-long history from the early Cambrian period to the end Permian period1. More than 20,000 species have been described to date, with presumed lifestyles ranging from infaunal burrowing to a planktonic life in the water column2. Inferred trophic roles range from detritivores to predators, but all are based on indirect evidence such as body and gut morphology, modes of preservation and attributed feeding traces; no trilobite specimen with internal gut contents has been described3,4. Here we present the complete and fully itemized gut contents of an Ordovician trilobite, Bohemolichas incola, preserved three-dimensionally in a siliceous nodule and visualized by synchrotron microtomography. The tightly packed, almost continuous gut fill comprises partly fragmented calcareous shells indicating high feeding intensity. The lack of dissolution of the shells implies a neutral or alkaline environment along the entire length of the intestine supporting digestive enzymes comparable to those in modern crustaceans or chelicerates. Scavengers burrowing into the trilobite carcase targeted soft tissues below the glabella but avoided the gut, suggesting noxious conditions and possibly ongoing enzymatic activity.


Asunto(s)
Artrópodos , Fósiles , Intestinos , Animales , Artrópodos/anatomía & histología , Artrópodos/enzimología , Artrópodos/fisiología , Evolución Biológica , Crustáceos/enzimología , Sincrotrones , Concentración de Iones de Hidrógeno , Intestinos/química , Intestinos/enzimología , Intestinos/metabolismo , Organismos Acuáticos/enzimología , Organismos Acuáticos/fisiología
2.
Mol Immunol ; 140: 240-249, 2021 12.
Artículo en Inglés | MEDLINE | ID: mdl-34773863

RESUMEN

We have previously reported that gamma-interferon inducible lysosomal thiolreductase (GILT) functions as a host defense factor against retroviruses by digesting disulfide bonds on viral envelope proteins. GILT is widely conserved even in plants and fungi as well as animals. The thiolreductase active site of mammalian GILT is composed of a CXXC amino acid motif, whereas the C-terminal cysteine residue is changed to serine in arthropods including shrimps, crabs, and flies. GILT from Penaeus monodon (PmGILT) also has the CXXS motif instead of the CXXC active site. We demonstrate here that a human GILT mutant (GILT C75S) with the CXXS motif and PmGILT significantly inhibit amphotropic murine leukemia virus vector infection in human cells without alterning its expression level and lysosomal localization, showing that the C-terminal cysteine residue of the active site is not required for the antiviral activity. We have reported that human GILT suppresses HIV-1 particle production by digestion of disulfide bonds on CD63. However, GILT C75S mutant and PmGILT did not digest CD63 disulfide bonds, and had no effect on HIV-1 virion production, suggesting that they do not have thiolreductase activity. Taken together, this study found that antiviral activity, but not thiolreductase activity, is conserved in arthropod GILT proteins. This finding provides a new insight that the common function of GILT is antiviral activity in many animals.


Asunto(s)
Antivirales/metabolismo , Artrópodos/enzimología , Artrópodos/virología , Interferón gamma/farmacología , Oxidorreductasas/metabolismo , Secuencias de Aminoácidos , Animales , Baculoviridae/fisiología , Células COS , Chlorocebus aethiops , Secuencia Conservada , Endosomas/metabolismo , VIH-1/fisiología , Células HeLa , Humanos , Interferón gamma/metabolismo , Virus de la Leucemia Murina/fisiología , Lisosomas/metabolismo , Oxidorreductasas/química , Penaeidae/virología , Especificidad por Sustrato , Virión/fisiología
3.
FEBS J ; 288(5): 1679-1695, 2021 03.
Artículo en Inglés | MEDLINE | ID: mdl-32679618

RESUMEN

Hydroxynitrile lyases (HNLs) catalyze the cleavage of cyanohydrin into cyanide and the corresponding aldehyde or ketone. Moreover, they catalyze the synthesis of cyanohydrin in the reverse reaction, utilized in industry for preparation of enantiomeric pure pharmaceutical ingredients and fine chemicals. We discovered a new HNL from the cyanogenic millipede, Chamberlinius hualienensis. The enzyme displays several features including a new primary structure, high stability, and the highest specific activity in (R)-mandelonitrile ((R)-MAN) synthesis (7420 U·mg-1 ) among the reported HNLs. In this study, we elucidated the crystal structure and reaction mechanism of natural ChuaHNL in ligand-free form and its complexes with acetate, cyanide ion, and inhibitors (thiocyanate or iodoacetate) at 1.6, 1.5, 2.1, 1.55, and 1.55 Å resolutions, respectively. The structure of ChuaHNL revealed that it belongs to the lipocalin superfamily, despite low amino acid sequence identity. The docking model of (R)-MAN with ChuaHNL suggested that the hydroxyl group forms hydrogen bonds with R38 and K117, and the nitrile group forms hydrogen bonds with R38 and Y103. The mutational analysis showed the importance of these residues in the enzymatic reaction. From these results, we propose that K117 acts as a base to abstract a proton from the hydroxyl group of cyanohydrins and R38 acts as an acid to donate a proton to the cyanide ion during the cleavage reaction of cyanohydrins. The reverse mechanism would occur during the cyanohydrin synthesis. (Photo: Dr. Yuko Ishida) DATABASES: Structural data are available in PDB database under the accession numbers 6JHC, 6KFA, 6KFB, 6KFC, and 6KFD.


Asunto(s)
Acetonitrilos/química , Aldehído-Liasas/química , Proteínas de Artrópodos/química , Artrópodos/química , Lipocalinas/química , Acetonitrilos/metabolismo , Aldehído-Liasas/genética , Aldehído-Liasas/metabolismo , Secuencia de Aminoácidos , Animales , Proteínas de Artrópodos/genética , Proteínas de Artrópodos/metabolismo , Artrópodos/enzimología , Sitios de Unión , Biocatálisis , Clonación Molecular , Cristalografía por Rayos X , Inhibidores Enzimáticos/química , Inhibidores Enzimáticos/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Expresión Génica , Vectores Genéticos/química , Vectores Genéticos/metabolismo , Ácido Yodoacético/química , Ácido Yodoacético/metabolismo , Cinética , Lipocalinas/genética , Lipocalinas/metabolismo , Simulación del Acoplamiento Molecular , Unión Proteica , Conformación Proteica en Hélice alfa , Conformación Proteica en Lámina beta , Dominios y Motivos de Interacción de Proteínas , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Especificidad por Sustrato , Tiocianatos/química , Tiocianatos/metabolismo
4.
Proc Biol Sci ; 287(1934): 20201429, 2020 09 09.
Artículo en Inglés | MEDLINE | ID: mdl-32873199

RESUMEN

The ability to synthesize simple aromatic compounds is well known from bacteria, fungi and plants, which all share an exclusive biosynthetic route-the shikimic acid pathway. Some of these organisms further evolved the polyketide pathway to form core benzenoids via a head-to-tail condensation of polyketide precursors. Arthropods supposedly lack the ability to synthesize aromatics and instead rely on aromatic amino acids acquired from food, or from symbiotic microorganisms. The few studies purportedly showing de novo biosynthesis via the polyketide synthase (PKS) pathway failed to exclude endosymbiotic bacteria, so their results are inconclusive. We investigated the biosynthesis of aromatic compounds in defence secretions of the oribatid mite Archegozetes longisetosus. Exposing the mites to a diet containing high concentrations of antibiotics removed potential microbial partners but did not affect the production of defensive benzenoids. To gain insights into benzenoid biosynthesis, we fed mites with stable-isotope labelled precursors and monitored incorporation with mass spectrometry. Glucose, malonic acid and acetate, but not phenylalanine, were incorporated into the benzenoids, further evidencing autogenous biosynthesis. Whole-transcriptome sequencing with hidden Markov model profile search of protein domain families and subsequent phylogenetic analysis revealed a putative PKS domain similar to an actinobacterial PKS, possibly indicating a horizontal gene transfer.


Asunto(s)
Ácaros/fisiología , Animales , Artrópodos/enzimología , Artrópodos/metabolismo , Hongos , Compuestos Orgánicos , Sintasas Poliquetidas/metabolismo , Simbiosis
5.
Arch Biochem Biophys ; 688: 108370, 2020 07 30.
Artículo en Inglés | MEDLINE | ID: mdl-32380017

RESUMEN

Hemocyanin (Hc) and phenoloxidase (PO) are members of the type 3 copper protein family. Although arthropod Hc and PO exhibit similar three-dimensional structures of the copper-containing active site, Hc functions as an oxygen transport protein, showing minimal or no phenoloxidase activity. Here, we present the crystal structure of the oxy form of Hc from Panulirus japonicus (PjHc) at 1.58 Å resolution. The structure of the di-copper active site of PjHc was found to be almost identical to that of PO. Although conserved amino acids and the water molecule crucial for the enzymatic activity were observed in PjHc at almost the same positions as those in PO, PjHc showed no enzymatic activity under our experimental conditions. One striking difference between PjHc and arthropod PO was the presence of a "blocker residue" near the binuclear copper site of PjHc. This blocker residue comprised a phenylalanine residue tightly stacked with an imidazole ring of a CuA coordinated histidine and hindered substrates from accessing the active site. Our results suggest that the blocker residue is also a determining factor of the catalytic activity of type 3 copper proteins.


Asunto(s)
Hemocianinas/química , Monofenol Monooxigenasa/química , Secuencia de Aminoácidos , Animales , Artrópodos/enzimología , Bacillus megaterium/enzimología , Dominio Catalítico , Cobre/química , Cristalografía por Rayos X , Alineación de Secuencia
6.
Subcell Biochem ; 94: 233-250, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32189302

RESUMEN

The copper-containing hemocyanins are proteins responsible for the binding, transportation and storage of dioxygen within the blood (hemolymph) of many invertebrates. Several additional functions have been attributed to both arthropod and molluscan hemocyanins, including (but not limited to) enzymatic activity (namely phenoloxidase), hormone transport, homeostasis (ecdysis) and hemostasis (clot formation). An important secondary function of hemocyanin involves aspects of innate immunity-such as acting as a precursor of broad-spectrum antimicrobial peptides and microbial/viral agglutination. In this chapter, we present the reader with an up-to-date synthesis of the known functions of hemocyanins and the structural features that facilitate such activities.


Asunto(s)
Artrópodos , Hemocianinas , Animales , Artrópodos/enzimología , Artrópodos/inmunología , Artrópodos/metabolismo , Hemocianinas/inmunología , Hemocianinas/metabolismo , Hemolinfa/metabolismo , Inmunidad Innata , Monofenol Monooxigenasa/metabolismo
7.
Artículo en Inglés | MEDLINE | ID: mdl-31751767

RESUMEN

Millipedes represent a model for the study of organic matter transformation, animal-microbial interactions, and compartmentalisation of digestion. The activity of saccharidases (amylase, laminarinase, cellulase, xylanase, chitinase, maltase, cellobiase, and trehalase) and protease were measured in the midgut and hindgut contents and walls of the millipedes Archispirostreptus gigas and Epibolus pulchripes. Assays done at pH 4 and 7 confirmed activities of all enzymes except xylanase. Hydrolysing of starch and laminarin prevailed. The hindgut of E. pulchripes was shorter, less differentiated. Micro-apocrine secretion was observed only in the midgut of A. gigas. Merocrine secretion was present in midgut and hindgut of E. pulchripes, and in the pyloric valve and anterior hindgut of A. gigas. Alpha-polysaccharidases were mostly active in the midgut content and walls, with higher activity at pH 4. The low activity of amylase (A. gigas) and laminarinase (E. pulchripes) in midgut tissue may indicate their synthesis in salivary glands. Cellulases were found in midgut. Chitinases, found in midgut content and tissue (E. pulchripes) or concentrated in the midgut wall (A. gigas), were more active at an acidic pH. Polysaccharidases were low in hindguts. Protease shows midgut origin and alkaline activity extending to the hindgut in E. pulchripes, whereas in A. gigas it is of salivary gland origin and acid activity restricted to the midgut. Some disaccharidases, with more alkaline activity, showed less apparent midgut-hindgut differences. It may indicate an axial separating of the primary and secondary digestion along the intestinal pH gradient or the presence of enzymes of hindgut parasites.


Asunto(s)
Artrópodos/enzimología , Quitinasas/metabolismo , Animales , Artrópodos/clasificación , Celulasa/metabolismo , Quitinasas/fisiología , Tracto Gastrointestinal/enzimología , Concentración de Iones de Hidrógeno , Péptido Hidrolasas/metabolismo , Polisacáridos/metabolismo , Especificidad por Sustrato
8.
Acta Crystallogr D Struct Biol ; 75(Pt 9): 817-824, 2019 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-31478904

RESUMEN

Olfactomedins are a family of modular proteins found in multicellular organisms that all contain five-bladed ß-propeller olfactomedin (OLF) domains. In support of differential functions for the OLF propeller, the available crystal structures reveal that only some OLF domains harbor an internal calcium-binding site with ligands derived from a triad of residues. For the myocilin OLF domain (myoc-OLF), ablation of the ion-binding site (triad Asp, Asn, Asp) by altering the coordinating residues affects the stability and overall structure, in one case leading to misfolding and glaucoma. Bioinformatics analysis reveals a variety of triads with possible ion-binding characteristics lurking in OLF domains in invertebrate chordates such as Arthropoda (Asp-Glu-Ser), Nematoda (Asp-Asp-His) and Echinodermata (Asp-Glu-Lys). To test ion binding and to extend the observed connection between ion binding and distal structural rearrangements, consensus triads from these phyla were installed in the myoc-OLF. All three protein variants exhibit wild-type-like or better stability, but their calcium-binding properties differ, concomitant with new structural deviations from wild-type myoc-OLF. Taken together, the results indicate that calcium binding is not intrinsically destabilizing to myoc-OLF or required to observe a well ordered side helix, and that ion binding is a differential feature that may underlie the largely elusive biological function of OLF propellers.


Asunto(s)
Artrópodos/enzimología , Equinodermos/enzimología , Proteínas de la Matriz Extracelular/química , Glicoproteínas/química , Nematodos/enzimología , Secuencia de Aminoácidos , Animales , Sitios de Unión , Calcio/metabolismo , Ligandos , Dominios Proteicos , Estructura Terciaria de Proteína
9.
Toxicon ; 168: 1-15, 2019 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-31229627

RESUMEN

Many venom proteins have presumably been convergently recruited by taxa from diverse venomous lineages. These toxic proteins have characteristics that allow them to remain stable in solution and have a high propensity for toxic effects on prey and/or potential predators. Despite this well-established convergent toxin recruitment, some toxins seem to be lineage specific. To further investigate the toxic proteins found throughout venomous lineages, venom proteomics and venom-gland transcriptomics were performed on two individual red bark centipedes (Scolopocryptops sexspinosus). Combining the protein phenotype with the transcript genotype resulted in the first in-depth venom characterization of S. sexspinosus, including 72 venom components that were identified in both the transcriptome and proteome and 1468 nontoxin transcripts identified in the transcriptome. Ten different toxin families were represented in the venom and venom gland with the majority of the toxins belonging to metalloproteases, CAPS (cysteine-rich secretory protein, antigen 5, and pathogenesis-related 1 proteins), and ß-pore-forming toxins. Nine of these toxin families shared a similar proteomic structure to venom proteins previously identified from other centipedes. However, the most highly expressed toxin family, the adamalysin-like metalloproteases, has until now only been observed in the venom of snakes. We confirmed adamalysin-like metalloprotease activity by means of in vivo functional assays. The recruitment of an adamalysin-like metalloprotease into centipede venom represents a striking case of convergent evolution.


Asunto(s)
Venenos de Artrópodos/enzimología , Artrópodos/enzimología , Artrópodos/genética , Metaloproteasas/química , Animales , Proteínas de Artrópodos/química , Proteínas de Artrópodos/genética , Venenos de Artrópodos/genética , Evolución Molecular , Metaloproteasas/genética , Proteoma , Transcriptoma
10.
Sci Rep ; 8(1): 3051, 2018 02 14.
Artículo en Inglés | MEDLINE | ID: mdl-29445093

RESUMEN

Hydroxynitrile lyases (HNLs), which are key enzymes in cyanogenesis, catalyze the cleavage of cyanohydrins into carbonyl compounds and hydrogen cyanide. Since HNLs also catalyze the reverse reaction, they are used industrially for the asymmetric synthesis of cyanohydrins, which are valuable building blocks of pharmaceuticals and fine chemicals. HNLs have been isolated from cyanogenic plants and bacteria. Recently, an HNL from the cyanogenic millipede Chamberlinius hualienensis was shown to have the highest specific activity for (R)-mandelonitrile synthesis, along with high stability and enantioselectivity. However, no HNLs have been isolated from other cyanogenic millipedes. We identified and characterized HNLs from 10 cyanogenic millipedes in the Paradoxosomatidae and Xystodesmidae. Sequence analyses showed that HNLs are conserved among cyanogenic millipedes and likely evolved from one ancestral gene. The HNL from Parafontaria tonominea was expressed in Escherichia coli SHuffle T7 and showed high specific activity for (R)-mandelonitrile synthesis and stability at a range of pHs and temperatures. The stability of millipede HNLs is likely due to disulfide bond(s). The E. coli cells expressing HNL produced (R)-mandelonitrile with 97.6% enantiomeric excess without organic solvents. These results demonstrate that cyanogenic millipedes are a valuable source of HNLs with high specific activity and stability.


Asunto(s)
Acetonitrilos/síntesis química , Aldehído-Liasas/química , Artrópodos/enzimología , Aldehído-Liasas/biosíntesis , Aldehído-Liasas/metabolismo , Animales , Artrópodos/genética , Biocatálisis , Catálisis , Clonación Molecular/métodos , Escherichia coli/genética , Escherichia coli/metabolismo , Nitrilos/metabolismo
11.
Nat Commun ; 9(1): 756, 2018 02 22.
Artículo en Inglés | MEDLINE | ID: mdl-29472725

RESUMEN

Thermobia domestica belongs to an ancient group of insects and has a remarkable ability to digest crystalline cellulose without microbial assistance. By investigating the digestive proteome of Thermobia, we have identified over 20 members of an uncharacterized family of lytic polysaccharide monooxygenases (LPMOs). We show that this LPMO family spans across several clades of the Tree of Life, is of ancient origin, and was recruited by early arthropods with possible roles in remodeling endogenous chitin scaffolds during development and metamorphosis. Based on our in-depth characterization of Thermobia's LPMOs, we propose that diversification of these enzymes toward cellulose digestion might have endowed ancestral insects with an effective biochemical apparatus for biomass degradation, allowing the early colonization of land during the Paleozoic Era. The vital role of LPMOs in modern agricultural pests and disease vectors offers new opportunities to help tackle global challenges in food security and the control of infectious diseases.


Asunto(s)
Artrópodos/enzimología , Proteínas de Insectos/metabolismo , Oxigenasas de Función Mixta/metabolismo , Polisacáridos/metabolismo , Animales , Artrópodos/genética , Artrópodos/crecimiento & desarrollo , Biodegradación Ambiental , Biomasa , Celulosa/metabolismo , Quitina/metabolismo , Evolución Molecular , Genes de Insecto , Proteínas de Insectos/química , Proteínas de Insectos/genética , Insectos/enzimología , Insectos/genética , Insectos/crecimiento & desarrollo , Oxigenasas de Función Mixta/química , Oxigenasas de Función Mixta/genética , Modelos Moleculares , Filogenia , Proteómica
12.
Biochim Biophys Acta Proteins Proteom ; 1866(1): 141-154, 2018 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-28502748

RESUMEN

Sequencing in all areas of the tree of life has produced >300,000 cytochrome P450 (CYP) sequences that have been mined and collected. Nomenclature has been assigned to >41,000 CYP sequences and the majority of the remainder has been sorted by BLAST searches into clans, families and subfamilies in preparation for naming. The P450 sequence space is being systematically explored and filled in. Well-studied groups like vertebrates are covered in greater depth while new insights are being added into uncharted territories like horseshoe crab (Limulus polyphemus), tardigrades (Hypsibius dujardini), velvet worm (Euperipatoides_rowelli), and basal land plants like hornworts, liverworts and mosses. CYPs from the fungi, one of the most diverse groups, are being explored and organized as nearly 800 fungal species are now sequenced. The CYP clan structure in fungi is emerging with 805 CYP families sorting into 32 CYP clans. >3000 bacterial sequences are named, mostly from terrestrial or freshwater sources. Of 18,379 bacterial sequences downloaded from the CYPED database, all are >43% identical to named CYPs. Therefore, they fit in the 602 named P450 prokaryotic families. Diversity in this group is becoming saturated, however 25% of 3305 seawater bacterial P450s did not match known P450 families, indicating marine bacterial CYPs are not as well sampled as land/freshwater based bacterial CYPs. Future sequencing plans of the Genome 10K project, i5k and GIGA (Global Invertebrate Genomics Alliance) are expected to produce more than one million cytochrome P450 sequences by 2020. This article is part of a Special Issue entitled: Cytochrome P450 biodiversity and biotechnology, edited by Erika Plettner, Gianfranco Gilardi, Luet Wong, Vlada Urlacher, Jared Goldstone.


Asunto(s)
Sistema Enzimático del Citocromo P-450/clasificación , Sistema Enzimático del Citocromo P-450/genética , Variación Genética , Genoma , Filogenia , Animales , Archaea/clasificación , Archaea/enzimología , Archaea/genética , Artrópodos/clasificación , Artrópodos/enzimología , Artrópodos/genética , Bacterias/clasificación , Bacterias/enzimología , Bacterias/genética , Evolución Biológica , Aves/clasificación , Aves/genética , Aves/metabolismo , Sistema Enzimático del Citocromo P-450/metabolismo , Hongos/clasificación , Hongos/enzimología , Hongos/genética , Expresión Génica , Humanos , Familia de Multigenes , Plantas/clasificación , Plantas/enzimología , Plantas/genética , Tardigrada/clasificación , Tardigrada/enzimología , Tardigrada/genética , Virus/clasificación , Virus/enzimología , Virus/genética
13.
Environ Sci Pollut Res Int ; 25(3): 2889-2898, 2018 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-29143931

RESUMEN

Induction of the antioxidant enzymes catalase (CAT), peroxidase (POD) and superoxide dismutase (SOD) and the avoidance of potentially toxic metals in soil by Folsomia candida were investigated. Both laboratory-spiked and field-polluted agricultural soils were used. Cadmium (Cd) concentrations in body tissues, animal avoidance behaviour and physico-chemical properties of the field soils were also determined. In laboratory Cd-spiked soils, the CAT and SOD activities in the Cd treatments were 71.1-94.7 and 1.31-4.55 times higher than in the control, respectively. In field-polluted agricultural soils, the CAT and POD activities generally increased with increasing pollution index (PI Nemerow ) of soil Cd, Cu, Pb and Zn. The CAT, POD and SOD activities at different PI Nemerow were 65.7-128, 30.1-180 and 36.5-95.8% higher than in the control, respectively. In line with the enzyme activities, Cd concentrations in the animal bodies were 8.31-15.1 and 3.21-10.0 times higher than in the control in spiked and field-polluted soils, respectively. Avoidance behaviour also increased with increasing metal concentrations in both soils. The effects of metals on CAT, POD or SOD activity were influenced by soil properties such as soil texture and pH. These results indicate that the antioxidant enzymes activities of F. candida can be induced by heavy metals and potentially used to assess the toxicity, and also that soil properties must be considered in the analysis of enzyme activities in different types of field soils.


Asunto(s)
Antioxidantes/metabolismo , Artrópodos , Reacción de Prevención/efectos de los fármacos , Monitoreo del Ambiente/métodos , Metales Pesados/toxicidad , Contaminantes del Suelo/toxicidad , Animales , Artrópodos/efectos de los fármacos , Artrópodos/enzimología , Modelos Teóricos , Suelo/química
14.
BMC Evol Biol ; 17(1): 92, 2017 03 29.
Artículo en Inglés | MEDLINE | ID: mdl-28356077

RESUMEN

BACKGROUND: NADPH oxidases (NOX) are ROS producing enzymes that perform essential roles in cell physiology, including cell signaling and antimicrobial defense. This gene family is present in most eukaryotes, suggesting a common ancestor. To date, only a limited number of phylogenetic studies of metazoan NOXes have been performed, with few arthropod genes. In arthropods, only NOX5 and DUOX genes have been found and a gene called NOXm was found in mosquitoes but its origin and function has not been examined. In this study, we analyzed the evolution of this gene family in arthropods. A thorough search of genomes and transcriptomes was performed enabling us to browse most branches of arthropod phylogeny. RESULTS: We have found that the subfamilies NOX5 and DUOX are present in all arthropod groups. We also show that a NOX gene, closely related to NOX4 and previously found only in mosquitoes (NOXm), can also be found in other taxonomic groups, leading us to rename it as NOX4-art. Although the accessory protein p22-phox, essential for NOX1-4 activation, was not found in any of the arthropods studied, NOX4-art of Aedes aegypti encodes an active protein that produces H2O2. Although NOX4-art has been lost in a number of arthropod lineages, it has all the domains and many signature residues and motifs necessary for ROS production and, when silenced, H2O2 production is considerably diminished in A. aegypti cells. CONCLUSIONS: Combining all bioinformatic analyses and laboratory work we have reached interesting conclusions regarding arthropod NOX gene family evolution. NOX5 and DUOX are present in all arthropod lineages but it seems that a NOX2-like gene was lost in the ancestral lineage leading to Ecdysozoa. The NOX4-art gene originated from a NOX4-like ancestor and is functional. Although no p22-phox was observed in arthropods, there was no evidence of neo-functionalization and this gene probably produces H2O2 as in other metazoan NOX4 genes. Although functional and present in the genomes of many species, NOX4-art was lost in a number of arthropod lineages.


Asunto(s)
Artrópodos/enzimología , Artrópodos/genética , NADPH Oxidasas/genética , Secuencia de Aminoácidos , Animales , Evolución Molecular , Genoma de los Insectos , Peróxido de Hidrógeno , NADPH Oxidasas/química , Filogenia , Especies Reactivas de Oxígeno , Alineación de Secuencia , Transducción de Señal
15.
Mol Ecol ; 26(12): 3217-3229, 2017 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-28316142

RESUMEN

Beta-lactam biosynthesis was thought to occur only in fungi and bacteria, but we recently reported the presence of isopenicillin N synthase in a soil-dwelling animal, Folsomia candida. However, it has remained unclear whether this gene is part of a larger beta-lactam biosynthesis pathway and how widespread the occurrence of penicillin biosynthesis is among animals. Here, we analysed the distribution of beta-lactam biosynthesis genes throughout the animal kingdom and identified a beta-lactam gene cluster in the genome of F. candida (Collembola), consisting of isopenicillin N synthase (IPNS), δ-(L-α-aminoadipoyl)-L-cysteinyl-D-valine synthetase (ACVS), and two cephamycin C genes (cmcI and cmcJ) on a genomic scaffold of 0.76 Mb. All genes are transcriptionally active and are inducible by stress (heat shock). A beta-lactam compound was detected in vivo using an ELISA beta-lactam assay. The gene cluster also contains an ABC transporter which is coregulated with IPNS and ACVS after heat shock. Furthermore, we show that different combinations of beta-lactam biosynthesis genes are present in over 60% of springtail families, but they are absent from genome- and transcript libraries of other animals including close relatives of springtails (Protura, Diplura and insects). The presence of beta-lactam genes is strongly correlated with an euedaphic (soil-living) lifestyle. Beta-lactam genes IPNS and ACVS each form a phylogenetic clade in between bacteria and fungi, while cmcI and cmcJ genes cluster within bacteria. This suggests a single horizontal gene transfer event most probably from a bacterial host, followed by differential loss in more recently evolving species.


Asunto(s)
Proteínas de Artrópodos/genética , Artrópodos/genética , Familia de Multigenes , beta-Lactamas , Animales , Artrópodos/enzimología , Cefamicinas , Oxidorreductasas/genética , Péptido Sintasas/genética , Filogenia
16.
J Agric Food Chem ; 65(8): 1630-1640, 2017 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-28156112

RESUMEN

The CaCel gene from Antarctic springtail Cryptopygus antarcticus codes for a cellulase belonging to the glycosyl hydrolase family 45 (GHF45). Phylogenetic, biochemical, and structural analyses revealed that the CaCel gene product (CaCel) is closely related to fungal GHF45 endo-ß-1,4-glucanases. The organization of five introns within the open reading frame of the CaCel gene indicates its endogenous origin in the genome of the species, which suggests the horizontal transfer of the gene from fungi to the springtail. CaCel exhibited optimal activity at pH 3.5, retained 80% of its activity at 0-10 °C, and maintained a half-life of 4 h at 70 °C. Based on the structural comparison between CaCel and a fungal homologue, we deduced the structural basis for the unusual characteristics of CaCel. Under acidic conditions at 50 °C, CaCel was effective to digest the green algae (Ulva pertusa), suggesting that it could be exploited for biofuel production from seaweeds.


Asunto(s)
Proteínas de Artrópodos/química , Proteínas de Artrópodos/genética , Artrópodos/enzimología , Celulasa/química , Celulasa/genética , Secuencia de Aminoácidos , Animales , Proteínas de Artrópodos/metabolismo , Artrópodos/química , Artrópodos/clasificación , Artrópodos/genética , Celulasa/metabolismo , Clonación Molecular , Frío , Estabilidad de Enzimas , Calor , Datos de Secuencia Molecular , Filogenia , Alineación de Secuencia
17.
Environ Pollut ; 222: 94-100, 2017 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-28082132

RESUMEN

The common soil arthropod Folsomia candida can survive well when fed only maize pollen and thus may be exposed to insecticidal proteins by ingesting insect-resistant genetically engineered maize pollen containing Bacillus thuringiensis (Bt) proteins when being released into the soil. Laboratory experiments were conducted to assess the potential effects of Cry1Ab/Cry2Aj-producing transgenic Bt maize (Shuangkang 12-5) pollen on F. candida fitness. Survival, development, and the reproduction were not significantly reduced when F. candida fed on Bt maize pollen rather than on non-Bt maize pollen, but these parameters were significantly reduced when F. candida fed on non-Bt maize pollen containing the protease inhibitor E-64 at 75 µg/g pollen. The intrinsic rate of increase (rm) was not significantly reduced when F. candida fed on Bt maize pollen but was significantly reduced when F. candida fed on non-Bt maize pollen containing E-64. The activities of antioxidant-related enzymes in F. candida were not significantly affected when F. candida fed on Bt maize pollen but were significantly increased when F. candida fed on non-Bt pollen containing E-64. The results demonstrate that consumption of Bt maize pollen containing Cry1Ab/Cry2Aj has no lethal or sublethal effects on F. candida.


Asunto(s)
Artrópodos/efectos de los fármacos , Proteínas Bacterianas/metabolismo , Endotoxinas/metabolismo , Proteínas Hemolisinas/metabolismo , Insecticidas/metabolismo , Control Biológico de Vectores , Polen/química , Zea mays , Alimentación Animal/efectos adversos , Alimentación Animal/análisis , Animales , Artrópodos/enzimología , Artrópodos/metabolismo , Toxinas de Bacillus thuringiensis , Proteínas Bacterianas/genética , Proteínas Bacterianas/toxicidad , Toxinas Bacterianas/genética , Toxinas Bacterianas/metabolismo , Toxinas Bacterianas/farmacología , China , Endotoxinas/genética , Endotoxinas/toxicidad , Proteínas Hemolisinas/genética , Proteínas Hemolisinas/toxicidad , Insecticidas/toxicidad , Plantas Modificadas Genéticamente/genética , Plantas Modificadas Genéticamente/metabolismo , Precursores de Proteínas/genética , Precursores de Proteínas/metabolismo , Suelo/química
18.
Environ Sci Pollut Res Int ; 24(12): 11111-11119, 2017 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-27094278

RESUMEN

Chemical analyses of the environment can document contamination by various xenobiotics, but it is also important to understand the effect of pollutants on living organisms. Thus, in the present work, we investigated the effect of the pesticide imidacloprid on the detoxifying enzyme glutathione S-transferase (GST) from Folsomia candida (Collembola), a standard test organism for estimating the effects of pesticides and environmental pollutants on non-target soil arthropods. Test animals were treated with different concentrations of imidacloprid for 48 h. Changes in steady-state levels of GST messenger RNA (mRNA) and GST enzyme activity were investigated. Extracted proteins were separated according to their sizes by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, and the resolved protein bands were detected by silver staining. The size of the glutathione (GSH) pool in Collembola was also determined. A predicted protein sequence of putative GSTs was identified with animals from control group. A 3-fold up-regulation of GST steady-state mRNA levels was detected in the samples treated with 5.0 mg L-1 imidacloprid compared to the control, while a 2.5- and 2.0- fold up-regulation was found in organisms treated with 2.5 and 7.5 mg L-1 imidacloprid, respectively. GST activity increased with increasing imidacloprid amounts from an initial activity of 0.11 µmol min-1 mg-1 protein in the control group up to 0.25 µmol min-1 mg-1 protein in the sample treated with the 5.0 mg L-1 of pesticide. By contrast, the total amount of GSH decreased with increasing imidacloprid concentration. The results suggest that the alteration of GST activity, steady-state level of GST mRNA, and GSH level may be involved in the response of F. candida to the exposure of imidacloprid and can be used as biomarkers to monitor the toxic effects of imidacloprid and other environmental pollutants on Collembola.


Asunto(s)
Artrópodos/enzimología , Glutatión Transferasa/metabolismo , Imidazoles/farmacología , Nitrocompuestos/farmacología , Animales , Artrópodos/efectos de los fármacos , Neonicotinoides
19.
Sci Rep ; 6: 26998, 2016 06 06.
Artículo en Inglés | MEDLINE | ID: mdl-27265180

RESUMEN

Soldiers of some eusocial insects exhibit an altruistic self-destructive defense behavior in emergency situations when attacked by large enemies. The swarm-forming invasive millipede, Chamberlinius hualienensis, which is not classified as eusocial animal, exudes irritant chemicals such as benzoyl cyanide as a defensive secretion. Although it has been thought that this defensive chemical was converted from mandelonitrile, identification of the biocatalyst has remained unidentified for 40 years. Here, we identify the novel blood enzyme, mandelonitrile oxidase (ChuaMOX), which stoichiometrically catalyzes oxygen consumption and synthesis of benzoyl cyanide and hydrogen peroxide from mandelonitrile. Interestingly the enzymatic activity is suppressed at a blood pH of 7, and the enzyme is segregated by membranes of defensive sacs from mandelonitrile which has a pH of 4.6, the optimum pH for ChuaMOX activity. In addition, strong body muscle contractions are necessary for de novo synthesis of benzoyl cyanide. We propose that, to protect its swarm, the sacrificial millipede also applies a self-destructive defense strategy-the endogenous rupturing of the defensive sacs to mix ChuaMOX and mandelonitrile at an optimum pH. Further study of defensive systems in primitive arthropods will pave the way to elucidate the evolution of altruistic defenses in the animal kingdom.


Asunto(s)
Proteínas de Artrópodos/fisiología , Artrópodos/enzimología , Oxidorreductasas/fisiología , Acetonitrilos/metabolismo , Animales , Conducta Animal , Cianuros/metabolismo , Concentración de Iones de Hidrógeno , Oxidación-Reducción
20.
Sci Rep ; 5: 15619, 2015 Oct 23.
Artículo en Inglés | MEDLINE | ID: mdl-26494315

RESUMEN

Collembolans are common soil arthropods that may be exposed to insecticidal proteins produced in genetically engineered (GE) plants by ingestion of crop residues or root exudates. In the present study, a dietary exposure assay was validated and used to assess the lethal and sublethal effects of two Bacillus thuringiensis (Bt) insecticidal proteins, Cry1C and Cry2A, on Folsomia candida. Using the insecticidal compounds potassium arsenate (PA), protease inhibitor (E-64), and Galanthus nivalis agglutinin (GNA) mixed into Baker's yeast, we show that the assay used can detect adverse effects on F. candida. Survival and development were significantly reduced when F. candida was fed a diet containing PA, E-64, and GNA at 9, 75, and 100 µg/g diet, respectively, but not when fed a diet containing 300 µg/g Cry1C or 600 µg/g Cry2A. The activities of test antioxidant-, detoxification-, and digestion-related enzymes in F. candida were unaltered by a diet containing 300 µg/g Cry1C or 600 µg/g Cry2A, but were significantly increased by a diet containing 75 µg/g E-64. The results confirm that Cry1C and Cry2A are not toxic to F. candida at concentrations that are much higher than those encountered under field conditions.


Asunto(s)
Artrópodos/efectos de los fármacos , Toxinas Bacterianas/farmacología , Precursores de Proteínas/farmacología , Animales , Artrópodos/enzimología
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